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1.
JACS Au ; 4(3): 1134-1141, 2024 Mar 25.
Artigo em Inglês | MEDLINE | ID: mdl-38559711

RESUMO

The M4,5-edge high energy resolution X-ray absorption near-edge structure (HR-XANES) spectra of actinyls offer valuable insights into the electronic structure and bonding properties of heavy-element complexes. To conduct a comprehensive spectral analysis, it is essential to employ computational methods that accurately account for relativistic effects and electron correlation. In this work, we utilize variational relativistic multireference configurational interaction methods to compute and analyze the X-ray M4-edge absorption spectrum of uranyl. By employing these advanced computational techniques, we achieve excellent agreement between the calculated spectral features and experimental observations. Moreover, the calculations unveil significant shake-up features, which arise from the intricate interplay between strongly correlated 3d core-electron and ligand excitations. This research provides important theoretical insights into the spectral characteristics of heavy-element complexes. Furthermore, it establishes the foundation for utilizing M4,5-edge spectroscopy as a means to investigate the chemical activities of such complexes. By leveraging this technique, we can gain a deeper understanding of the bonding behavior and reactivity of heavy-element compounds.

2.
J Chem Theory Comput ; 19(17): 5785-5790, 2023 Sep 12.
Artigo em Inglês | MEDLINE | ID: mdl-37589436

RESUMO

In photochemical processes, spin-orbit coupling plays a crucial role in determining the outcome of the reaction. However, the exact treatment of the Dirac-Coulomb-Breit two-electron operator required for rigorous inclusion of spin-orbit coupling is computationally prohibitive. To address this challenge, we present a Dirac-Coulomb-Breit-parameterized screened-nuclear spin-orbit factor to approximate two-electron spin-orbit couplings in the effective one-electron spin-orbit Hamiltonian. We propose two schemes, the universal and row-dependent parameterizations, to further improve the accuracy of the method. Benchmark calculations on both atomic and molecular systems are performed and compared to results from the computationally expensive four-component Dirac-Coulomb-Breit method. The Dirac-Coulomb-Breit-parameterized approach offers a more computationally feasible method for accurate spin-orbit coupling calculations.

3.
J Chem Phys ; 158(17)2023 May 07.
Artigo em Inglês | MEDLINE | ID: mdl-37139994

RESUMO

Variational treatment of the Dirac-Coulomb-Gaunt or Dirac-Coulomb-Breit two-electron interaction at the Dirac-Hartree-Fock level is the starting point of high-accuracy four-component calculations of atomic and molecular systems. In this work, we introduce, for the first time, the scalar Hamiltonians derived from the Dirac-Coulomb-Gaunt and Dirac-Coulomb-Breit operators based on spin separation in the Pauli quaternion basis. While the widely used spin-free Dirac-Coulomb Hamiltonian includes only the direct Coulomb and exchange terms that resemble nonrelativistic two-electron interactions, the scalar Gaunt operator adds a scalar spin-spin term. The spin separation of the gauge operator gives rise to an additional scalar orbit-orbit interaction in the scalar Breit Hamiltonian. Benchmark calculations of Aun (n = 2-8) show that the scalar Dirac-Coulomb-Breit Hamiltonian can capture 99.99% of the total energy with only 10% of the computational cost when real-valued arithmetic is used, compared to the full Dirac-Coulomb-Breit Hamiltonian. The scalar relativistic formulation developed in this work lays the theoretical foundation for the development of high-accuracy, low-cost correlated variational relativistic many-body theory.

4.
J Chem Phys ; 157(6): 064112, 2022 Aug 14.
Artigo em Inglês | MEDLINE | ID: mdl-35963720

RESUMO

The frequency-independent Coulomb-Breit operator gives rise to the most accurate treatment of two-electron interaction in the non-quantum-electrodynamics regime. The Breit interaction in the Coulomb gauge consists of magnetic and gauge contributions. The high computational cost of the gauge term limits the application of the Breit interaction in relativistic molecular calculations. In this work, we apply the Pauli component integral-density matrix contraction scheme for gauge interaction with a maximum spin- and component separation scheme. We also present two different computational algorithms for evaluating gauge integrals. One is the generalized Obara-Saika algorithm, where the Laplace transformation is used to transform the gauge operator into Gaussian functions and the Obara-Saika recursion is used for reducing the angular momentum. The other algorithm is the second derivative of Coulomb interaction evaluated with Rys-quadrature. This work improves the efficiency of performing Dirac-Hartree-Fock with the variational treatment of Breit interaction for molecular systems. We use this formalism to examine relativistic trends in the Periodic Table and analyze the relativistic two-electron interaction contributions in heavy-element complexes.

5.
J Comput Aided Mol Des ; 35(3): 271-284, 2021 03.
Artigo em Inglês | MEDLINE | ID: mdl-33506360

RESUMO

Many molecular simulation methods use force fields to help model and simulate molecules and their behavior in various environments. Force fields are sets of functions and parameters used to calculate the potential energy of a chemical system as a function of the atomic coordinates. Despite the widespread use of force fields, their inadequacies are often thought to contribute to systematic errors in molecular simulations. Furthermore, different force fields tend to give varying results on the same systems with the same simulation settings. Here, we present a pipeline for comparing the geometries of small molecule conformers. We aimed to identify molecules or chemistries that are particularly informative for future force field development because they display inconsistencies between force fields. We applied our pipeline to a subset of the eMolecules database, and highlighted molecules that appear to be parameterized inconsistently across different force fields. We then identified over-represented functional groups in these molecule sets. The molecules and moieties identified by this pipeline may be particularly helpful for future force field parameterization.


Assuntos
Compostos Aza/química , Compostos Orgânicos/química , Bases de Dados de Compostos Químicos , Modelos Moleculares , Conformação Molecular , Fenômenos Físicos , Teoria Quântica , Software , Relação Estrutura-Atividade , Termodinâmica
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