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1.
Environ Sci Ecotechnol ; 21: 100392, 2024 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-38434492

RESUMO

Activated carbon is employed for the adsorption of organic micropollutants (OMPs) from water, typically present in concentrations ranging from ng L-1 to µg L-1. However, the efficacy of OMP removal is considerably deteriorated due to competitive adsorption from background dissolved organic matter (DOM), present at substantially higher concentrations in mg L-1. Interpreting the characteristics of competitive DOM is crucial in predicting OMP adsorption efficiencies across diverse natural waters. Molecular weight (MW), aromaticity, and polarity influence DOM competitiveness. Although the aromaticity-related metrics, such as UV254, of low MW DOM were proposed to correlate with DOM competitiveness, the method suffers from limitations in understanding the interplay of polarity and aromaticity in determining DOM competitiveness. Here, we elucidate the intricate influence of aromaticity and polarity in low MW DOM competition, spanning from a fraction level to a compound level, by employing direct sample injection liquid chromatography coupled with ultrahigh-resolution Fourier-transform ion cyclotron resonance mass spectrometry. Anion exchange resin pre-treatment eliminated 93% of UV254-active DOM, predominantly aromatic and polar DOM, and only minimally alleviated DOM competition. Molecular characterization revealed that nonpolar molecular formulas (constituting 26% PAC-adsorbable DOM) with medium aromaticity contributed more to the DOM competitiveness. Isomer-level analysis indicated that the competitiveness of highly aromatic LMW DOM compounds was strongly counterbalanced by increased polarity. Strong aromaticity-derived π-π interaction cannot facilitate the competitive adsorption of hydrophilic DOM compounds. Our results underscore the constraints of depending solely on aromaticity-based approaches as the exclusive interpretive measure for DOM competitiveness. In a broader context, this study demonstrates an effect-oriented DOM analysis, elucidating counterbalancing interactions of DOM molecular properties from fraction to compound level.

2.
J Clin Med ; 12(13)2023 Jul 06.
Artigo em Inglês | MEDLINE | ID: mdl-37445561

RESUMO

The effectiveness of in virtuo exposure-based treatment of performance-only social anxiety disorder (SAD) has been demonstrated in several studies. However, few studies have validated virtual environments with participants suffering from generalized SAD. The goal of this study is to confirm the potential of a virtual environment in inducing anxiety in adults suffering from generalized SAD, compared to adults without SAD, when engaged in awkward social interactions. Differences between participants from two different countries were also explored. The sample consisted of 15 participants with SAD from Canada, 17 participants without SAD from Canada, 16 participants with SAD from Spain, and 21 participants without SAD from Spain. All participants were immersed in a control virtual environment and in an experimental virtual environment considered potentially anxiety-inducing for individuals with generalized SAD. As hypothesized, results showed that the experimental virtual environment induced a higher level of anxiety than the control environment among participants with SAD compared to those without SAD. The impact on anxiety of each socially threatening task performed during the experimental immersion was statistically significant. In terms of anxiety responses, no significant differences were found between participants from Canada and Spain. However, spatial presence and ecological validity were higher in Canadians than in Spaniards. Unwanted negative side effects induced by immersions in virtual reality were higher in the SAD group. This study highlights the importance for therapists to engage people with SAD in clinically relevant tasks while immersed in VR psychotherapeutic applications.

3.
Front Psychiatry ; 13: 991755, 2022.
Artigo em Inglês | MEDLINE | ID: mdl-36299540

RESUMO

Background: Social anxiety disorder (SAD) has a high prevalence and an early onset with recovery taking decades to occur. Current evidence supports the efficacy of cognitive behavioral therapy (CBT) with virtual reality (VR) exposure. However, the evidence is based on a sparse number of studies with predominantly small sample sizes. There is a need for more trials investigating the optimal way of applying VR based exposure for SAD. In this trial, we will test the efficacy of CBT with adaptive VR exposure allowing adjustment of the exposure based on real-time monitoring of the participants's anxiety level. Methods: The trial is a randomized controlled, assessor-blinded, parallel-group superiority trail. The study has two arms: (1) CBT including exposure in vivo (CBT-Exp), (2) CBT including exposure therapy using individually tailored VR-content and a system to track anxiety levels (CBT-ExpVR). Treatment is individual, manual-based and consists of 10 weekly sessions with a duration of 60 min. The study includes 90 participants diagnosed with SAD. Assessments are carried out pre-treatment, mid-treatment and at follow-up (6 and 12 months). The primary outcome is the mean score on the Social Interaction Anxiety Scale (SIAS) with the primary endpoint being post-treatment. Discussion: The study adds to the existing knowledge by assessing the efficacy of CBT with adaptive VR exposure. The study has high methodological rigor using a randomized controlled trial with a large sample size that includes follow-up data and validated measures for social anxiety outcomes. Clinical trial registration: ClinicalTrials.gov, identifier: NCT05302518.

4.
Membranes (Basel) ; 12(6)2022 May 31.
Artigo em Inglês | MEDLINE | ID: mdl-35736284

RESUMO

Ion adsorbing ultrafiltration membranes provide an interesting possibility to remove toxic ions from water. Furthermore, it is also possible to recover valuable elements. In this work, we demonstrate two easy strategies to modify polyacrylonitrile membranes with anion and cation adsorbing groups. The membranes were modified to have positively charged amine groups or negatively charged carboxyl groups. The success of the reactions was confirmed using IR spectroscopy and zeta-potential measurements. The membranes carrying negatively charged groups provided a negative zeta-potential and had an isoelectric point at pH 3.6, while the membranes carrying positively charged groups had a positive zeta-potential in the analyzed pH range. Since only the surface of the polymer was modified, the pore size and permeance of the membranes were not drastically affected. The membranes prepared by both modification strategies had a pure water permeance higher than 1000 L/(m2 h bar) and a water contact angle of 44.3 and 57.2°, respectively. Therefore, the membranes can be operated at low pressures with reasonable flux. Additionally, SEM images showed that the membranes were still open-pored. Adsorption tests using a positively and a negatively charged dye as well as a toxic cation and an anion were performed to analyze the adsorption behavior. Both membranes were able to adsorb the oppositely charged dyes as well as the copper and chromate ions. Therefore, these membranes are good candidates to purify water streams containing hazardous ions.

5.
Water Res ; 221: 118739, 2022 Aug 01.
Artigo em Inglês | MEDLINE | ID: mdl-35716412

RESUMO

Membrane ozonation of bromide-containing, high-color natural organic matter (NOM) containing groundwater was performed using single-tube polydimethylsiloxane (PDMS) and multi-tube polytetrafluoroethylene (PTFE) membrane contactors, and compared to batch ozonation. For membrane ozonation, dissolved ozone concentration, water color (VIS436), ultraviolet light absorption (UV254) and bromate formation were correlated with ozone dose, ozone gas concentration, hydraulic retention time and Hatta number (Ha). NOM color removal of up to 45 % for the single-tube contactor and 17 % for the multi-tube contactor were achieved while containing bromate formation below 10 µg L-1. Higher color removal using higher ozone doses was associated with high bromate formation i.e. >>10 µg L-1. In membrane ozonation, low ozone gas concentrations, long hydraulic retention times and high Ha resulted in low dissolved ozone concentrations due to quenching of ozone by NOM. At specific ozone doses of < 0.5 mg O3/mg DOC and Ha > 1, single-tube ozonation resulted in comparable results to batch ozonation while bromate formation was higher in the single-tube contactor at specific ozone doses > 0.5 mg O3/mg DOC and Ha < 1. At comparable ozone doses and Ha, bromate formation in the multi-tube contactor was always higher compared to single-tube and batch ozonation. This could be associated with the uneven ozone distribution within the multi-tube contactor. Results show that ozone dose is the major driver for selectivity between bromate formation and NOM color removal in both membrane and batch ozonation. Bromate formation in membrane ozonation may be controlled by adjusting gas concentration, Ha and hydraulic retention time. Membrane module design and process parameters of membrane ozonation reactors significantly affect treatment performance and should be optimized for selective target compound removal over by-product formation.


Assuntos
Água Subterrânea , Ozônio , Poluentes Químicos da Água , Purificação da Água , Bromatos , Poluentes Químicos da Água/análise , Purificação da Água/métodos
6.
Cancer Cell Int ; 22(1): 54, 2022 Feb 02.
Artigo em Inglês | MEDLINE | ID: mdl-35109825

RESUMO

BACKGROUND: Canine prostate adenocarcinoma (PAC) and transitional cell carcinoma (TCC) are typically characterized by metastasis and chemoresistance. Cell lines are important model systems for developing new therapeutic strategies. However, as they adapt to culturing conditions and undergo clonal selection, they can diverge from the tissue from which they were originally derived. Therefore, a comprehensive characterization of cell lines and their original tissues is paramount. METHODS: This study compared the transcriptomes of nine canine cell lines derived from PAC, PAC metastasis and TCC to their respective original primary tumor or metastasis tissues. Special interests were laid on cell culture-related differences, epithelial to mesenchymal transition (EMT), the prostate and bladder cancer pathways, therapeutic targets in the PI3K-AKT signaling pathway and genes correlated with chemoresistance towards doxorubicin and carboplatin. RESULTS: Independent analyses for PAC, PAC metastasis and TCC revealed 1743, 3941 and 463 genes, respectively, differentially expressed in the cell lines relative to their original tissues (DEGs). While genes associated with tumor microenvironment were mostly downregulated in the cell lines, patient-specific EMT features were conserved. Furthermore, examination of the prostate and bladder cancer pathways revealed extensive concordance between cell lines and tissues. Interestingly, all cell lines preserved downstream PI3K-AKT signaling, but each featured a unique therapeutic target signature. Additionally, resistance towards doxorubicin was associated with G2/M cell cycle transition and cell membrane biosynthesis, while carboplatin resistance correlated with histone, m- and tRNA processing. CONCLUSION: Comparative whole-transcriptome profiling of cell lines and their original tissues identifies models with conserved therapeutic target expression. Moreover, it is useful for selecting suitable negative controls, i.e., cell lines lacking therapeutic target expression, increasing the transfer efficiency from in vitro to primary neoplasias for new therapeutic protocols. In summary, the dataset presented here constitutes a rich resource for canine prostate and bladder cancer research.

7.
3D Print Addit Manuf ; 9(3): 223-231, 2022 Jun 01.
Artigo em Inglês | MEDLINE | ID: mdl-36660021

RESUMO

Laser melting experiments were carried out with the MOONRISE payload, installed on the mobile manipulator, MIRA3D. The MOONRISE payload was developed to demonstrate the feasibility of additive processing of lunar regolith with the help of lasers on the Moon within a lunar surface mission in the next years. The development of hardware for the flight to the moon is well advanced and, if successful, would pave the way for the use of laser melting for production of components from regolith. The aim of the experiments described in this article was to test the planned scenario on the Moon, especially the interaction between laser payload, manipulator, and soil surface, and to identify suitable process parameters for production of two-dimensional (2D) objects. The ability to produce 2D objects is an important intermediate step on the way to produce large three-dimensional structures such as habitats, walls, or foundations. During the experiments, specimens with a size of ∼20 × 20 × 4 mm were repeatedly produced. As analog material, two synthetic lunar soils produced with the modular regolith simulant systems from Technische Universität Braunschweig (TUBS) were used. The experiments were conducted under Earth gravity and atmospheric conditions. This article describes the hardware used, procedure for carrying out the experiments, and properties of the produced samples.

9.
Water Res ; 201: 117318, 2021 Aug 01.
Artigo em Inglês | MEDLINE | ID: mdl-34134036

RESUMO

Negatively charged electrically conductive ultrafiltration (UF) membranes have been intensively investigated for fouling mitigation and rejection enhancement in recent years. This study reports the novel approach of applying positive charge (+2.5 V cell potential) to a conductive membrane to induce electrosorption of negatively charged substances onto the membrane. Subsequently, desorption of negatively charged substances is achieved by changing the potential periodically (e.g., after 30 min) to negative charge (-2.5 V cell potential). For this purpose, sputter deposition of ultra-thin gold layers (40 nm) is used to generate electrically conductive gold-polymer-gold flat sheet membranes by coating the active and the support layer of two commercial polymer UF membranes (polyethersulfone UP150, polyamide M5). When M5 membrane was charged positively during filtration (+2.5 V), Suwannee River NOM, Hohloh lake NOM, humic acid and Brilliant Blue ionic dye showed removal rates of 70 %, 75% and 93% and 99%, respectively. Whereas, when no potential was applied (0 V) removal rates were only 1 - 5 %. When a positive potential was applied to the active membrane layer and a negative potential was applied to the support layer (cell potential 2.5 V), a significant increase of flux with 25 L/(m² h) was observed due to the induction of electro-osmosis. Electrosorption was only observed for M5 membrane (ζ: +13 mV, pH 7) and not with UP150 membrane (ζ: -29 mV, pH 7). Due to a low current density of 1.1 A/m² at a flux of 100 L/(m² h), the additional energy consumption of electrosorption and desorption process was low with 0.03 kWh per m³ of permeate. This study delivered the proof of concept for the novel process of electrosorptive UF with energy consumption between microfiltration and ultrafiltration but NOM removal rates of nanofiltration membranes.


Assuntos
Ultrafiltração , Purificação da Água , Substâncias Húmicas/análise , Membranas Artificiais , Água
10.
Membranes (Basel) ; 11(2)2021 Feb 02.
Artigo em Inglês | MEDLINE | ID: mdl-33540874

RESUMO

Layer-by-layer (LbL) modification of porous membranes for water filtration has become an active research field in the past few years. Different mechanisms regarding polyelectrolyte film growth, swelling and smoothing, transport through these films, etc., have been studied. Although there are conjectures, it is not yet fully understood where the polyelectrolyte layering takes place when modifying porous membranes, either within the pores or on top of the porous material. This study presents a theoretical approach to investigate the dominant layer buildup regime between pore-dominated vs. layer-dominated growth of polyelectrolytes on porous membranes without mechanically interfering or damaging the membrane material. For this, fouling mechanism processes are used as an analogy. The presented approach gives a new insight into layering conformation and might be helpful to investigate the interaction between the membrane surface and the PE film. Moreover, the MgSO4 rejection behavior of two types of modified membranes was investigated: one with an initial pore-dominated layer growth followed by a layer-dominated film growth; the other one with a completely layer-dominated film growth. The data confirm that a rejection for MgSO4 could only be achieved in the regime of layer-dominated film growth. Additionally, when layer-dominated film growth prevails from the early stages of the coating process, permeability values are higher at similar MgSO4 rejection rates compared to an initial pore-dominated and then layer-dominated film growth. Accordingly, the interaction between the membrane pore size and molecular weight of the polyelectrolytes in the coating solutions plays an important role during LbL coating.

11.
Brief Bioinform ; 22(3)2021 05 20.
Artigo em Inglês | MEDLINE | ID: mdl-32484516

RESUMO

MOTIVATION: The difficulty to find new drugs and bring them to the market has led to an increased interest to find new applications for known compounds. Biological samples from many disease contexts have been extensively profiled by transcriptomics, and, intuitively, this motivates to search for compounds with a reversing effect on the expression of characteristic disease genes. However, disease effects may be cell line-specific and also depend on other factors, such as genetics and environment. Transcription profile changes between healthy and diseased cells relate in complex ways to profile changes gathered from cell lines upon stimulation with a drug. Despite these differences, we expect that there will be some similarity in the gene regulatory networks at play in both situations. The challenge is to match transcriptomes for both diseases and drugs alike, even though the exact molecular pathology/pharmacogenomics may not be known. RESULTS: We substitute the challenge to match a drug effect to a disease effect with the challenge to match a drug effect to the effect of the same drug at another concentration or in another cell line. This is welldefined, reproducible in vitro and in silico and extendable with external data. Based on the Connectivity Map (CMap) dataset, we combined 26 different similarity scores with six different heuristics to reduce the number of genes in the model. Such gene filters may also utilize external knowledge e.g. from biological networks. We found that no similarity score always outperforms all others for all drugs, but the Pearson correlation finds the same drug with the highest reliability. Results are improved by filtering for highly expressed genes and to a lesser degree for genes with large fold changes. Also a network-based reduction of contributing transcripts was beneficial, here implemented by the FocusHeuristics. We found no drop in prediction accuracy when reducing the whole transcriptome to the set of 1000 landmark genes of the CMap's successor project Library of Integrated Network-based Cellular Signatures. All source code to re-analyze and extend the CMap data, the source code of heuristics, filters and their evaluation are available to propel the development of new methods for drug repurposing. AVAILABILITY: https://bitbucket.org/ibima/moldrugeffectsdb. CONTACT: steffen.moeller@uni-rostock.de. SUPPLEMENTARY INFORMATION: Supplementary data are available at Briefings in Bioinformatics online.


Assuntos
Reposicionamento de Medicamentos , Farmacogenética , Biologia Computacional/métodos , Perfilação da Expressão Gênica , Redes Reguladoras de Genes , Reprodutibilidade dos Testes , Relação Estrutura-Atividade , Transcriptoma
12.
Environ Sci Pollut Res Int ; 28(42): 59063-59075, 2021 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-32277417

RESUMO

Arsenic is among the major drinking water contaminants affecting populations in many countries because it causes serious health problems on long-term exposure. Two low-cost micro-sized iron oxyhydroxide-based adsorbents (which are by-products of the industrial production process of granular adsorbents), namely, micro granular ferric hydroxide (µGFH) and micro tetravalent manganese feroxyhyte (µTMF), were applied in batch adsorption kinetic tests and submerged microfiltration membrane adsorption hybrid system (SMAHS) to remove pentavalent arsenic (As(V)) from modeled drinking water. The adsorbents media were characterized in terms of iron content, BET surface area, pore volume, and particle size. The results of adsorption kinetics show that initial adsorption rate of As(V) by µTMF is faster than µGFH. The SMAHS results revealed that hydraulic residence time of As(V) in the slurry reactor plays a critical role. At longer residence time, the achieved adsorption capacities at As(V) permeate concentration of 10 µg/L (WHO guideline value) are 0.95 and 1.04 µg/mg for µGFH and µTMF, respectively. At shorter residence time of ~ 3 h, µTMF was able to treat 1.4 times more volumes of arsenic-polluted water than µGFH under the optimized experimental conditions due to its fast kinetic behavior. The outcomes of this study confirm that micro-sized iron oyxhydroxides, by-products of conventional adsorbent production processes, can successfully be employed in the proposed hybrid water treatment system to achieve drinking water guideline value for arsenic, without considerable fouling of the porous membrane. Graphical abstract.


Assuntos
Arsênio , Água Potável , Poluentes Químicos da Água , Purificação da Água , Adsorção , Arseniatos , Arsênio/análise , Compostos Férricos , Concentração de Íons de Hidrogênio , Poluentes Químicos da Água/análise
13.
Membranes (Basel) ; 10(12)2020 Dec 10.
Artigo em Inglês | MEDLINE | ID: mdl-33322011

RESUMO

The characterization of membranes is suitable to investigate changes in the membrane properties caused by Layer-by-Layer (LbL) modification. Besides permeability, rejection, and molecular-weight cut-off (MWCO), which give information about the modification of the separation behaviour of the membrane, the zeta potential is capable of describing the surface charge of the membrane and its variation impacted by the properties of the polyelectrolyte multilayers (PEM). In this study, a new method for zeta potential measurement of hollow fibre membranes with several capillaries was developed and further investigations on the LbL modification of such membranes were performed. The results showed that an LbL coating with 8 DL PDADMAC/PSS led to a significant increase in the membrane charge of more than 20 mV. The coating with a different number of polyelectrolyte (PE) layers showed a zig-zag behaviour, comparable to data from flat sheet studies. However, in contrast to most flat sheet membranes, the charge curve assumes a totally negative trajectory at neutral pH. Further experiments on the MWCO of the LbL-modified membrane showed a reduction in the pore diameter from approx. 20 nm to less than 2 nm, reaching the range of nanofiltration membranes. With information on both the zeta potential and the MWCO, it was found that the rejection mechanism in LbL-modified multibore membranes is a complex interplay between the sieving effect due to reduction in the pore diameter and the repulsion effect of the charged membrane.

14.
J Hazard Mater ; 400: 123221, 2020 12 05.
Artigo em Inglês | MEDLINE | ID: mdl-32947682

RESUMO

The adsorption of arsenic (V), As(V), on two porous iron oxyhydroxide-based adsorbents, namely, micro-sized tetravalent manganese feroxyhyte (µTMF) and granular ferric hydroxide (µGFH), applied in a submerged microfiltration membrane hybrid system has been investigated and modeled. Batch adsorption tests were carried out to determine adsorption equilibrium and kinetics parameters of As(V) in a bench-scale slurry reactor setup. A mathematical model has been developed to describe the kinetic data as well as to predict the As(V) breakthrough curves in the hybrid system based on the homogeneous surface diffusion model (HSDM) and the corresponding solute mass balance equation. The kinetic parameters describing the mass transfer resistance due to intraparticle surface diffusion (Ds) involved in the HSDM was determined. The fitted Ds values for the smaller (1-63 µm) and larger (1-250 µm) diameter particles of µGFH and µTMF were estimated to be 1.09 × 10-18 m2/s and 1.53 × 10-16 m2/s, and 2.26 × 10-18 m2/s and 1.01 × 10-16 m2/s, respectively. The estimated values of mass transfer coefficient/ kinetic parameters are then applied in the developed model to predict the As(V) concentration profiles in the effluent of the hybrid membrane system. The predicted results were compared with experimental data for As(V) removal and showed an excellent agreement. After validation at varying adsorbent doses and membrane fluxes, the developed mathematical model was used to predict the influence of different operation conditions on As(V) effluent concentration profile. The model simulations also exhibit that the hybrid system benefits from increasing the amount of adsorbent initially dosed and from decreasing the membrane flux (increasing the contact time).

15.
Biochem J ; 477(2): 359-380, 2020 01 31.
Artigo em Inglês | MEDLINE | ID: mdl-31899485

RESUMO

The lysosomal storage disorder Fabry disease is characterized by a deficiency of the lysosomal enzyme α-Galactosidase A. The observation that missense variants in the encoding GLA gene often lead to structural destabilization, endoplasmic reticulum retention and proteasomal degradation of the misfolded, but otherwise catalytically functional enzyme has resulted in the exploration of alternative therapeutic approaches. In this context, we have investigated proteostasis regulators (PRs) for their potential to increase cellular enzyme activity, and to reduce the disease-specific accumulation of the biomarker globotriaosylsphingosine in patient-derived cell culture. The PRs also acted synergistically with the clinically approved 1-deoxygalactonojirimycine, demonstrating the potential of combination treatment in a therapeutic application. Extensive characterization of the effective PRs revealed inhibition of the proteasome and elevation of GLA gene expression as paramount effects. Further analysis of transcriptional patterns of the PRs exposed a variety of genes involved in proteostasis as potential modulators. We propose that addressing proteostasis is an effective approach to discover new therapeutic targets for diseases involving folding and trafficking-deficient protein mutants.


Assuntos
Doença de Fabry/genética , Doenças por Armazenamento dos Lisossomos/genética , Proteostase/genética , alfa-Galactosidase/genética , 1-Desoxinojirimicina/análogos & derivados , 1-Desoxinojirimicina/uso terapêutico , Biomarcadores/metabolismo , Retículo Endoplasmático/genética , Retículo Endoplasmático/metabolismo , Doença de Fabry/tratamento farmacológico , Doença de Fabry/enzimologia , Doença de Fabry/patologia , Fibroblastos/efeitos dos fármacos , Fibroblastos/metabolismo , Regulação Enzimológica da Expressão Gênica/efeitos dos fármacos , Humanos , Doenças por Armazenamento dos Lisossomos/tratamento farmacológico , Doenças por Armazenamento dos Lisossomos/enzimologia , Doenças por Armazenamento dos Lisossomos/patologia , Lisossomos/enzimologia , Lisossomos/genética , Lisossomos/metabolismo , Mutação de Sentido Incorreto/genética , Complexo de Endopeptidases do Proteassoma/genética , Complexo de Endopeptidases do Proteassoma/metabolismo , Transporte Proteico/efeitos dos fármacos , Esfingosina/análogos & derivados , Esfingosina/metabolismo
16.
Sci Rep ; 9(1): 13356, 2019 09 16.
Artigo em Inglês | MEDLINE | ID: mdl-31527703

RESUMO

Early mouse embryos have an atypical translational machinery that consists of cytoplasmic lattices and is poorly competent for translation. Hence, the impact of transcriptomic changes on the operational level of proteins is predicted to be relatively modest. To investigate this, we performed liquid chromatography-tandem mass spectrometry and mRNA sequencing at seven developmental stages, from the mature oocyte to the blastocyst, and independently validated our data by immunofluorescence and qPCR. We detected and quantified 6,550 proteins and 20,535 protein-coding transcripts. In contrast to the transcriptome - where changes occur early, mostly at the 2-cell stage - our data indicate that the most substantial changes in the proteome take place towards later stages, between the morula and blastocyst. We also found little to no concordance between the changes in protein and transcript levels, especially for early stages, but observed that the concordance increased towards the morula and blastocyst, as did the number of free ribosomes. These results are consistent with the cytoplasmic lattice-to-free ribosome transition being a key mediator of developmental regulation. Finally, we show how these data can be used to appraise the strengths and limitations of mRNA-based studies of pre-implantation development and expand on the list of known developmental markers.


Assuntos
Blastocisto/metabolismo , Desenvolvimento Embrionário/genética , Animais , Blastocisto/fisiologia , Blástula/metabolismo , Cromatografia Líquida/métodos , Embrião de Mamíferos/metabolismo , Feminino , Regulação da Expressão Gênica no Desenvolvimento/genética , Masculino , Camundongos , Camundongos Endogâmicos , Mórula/metabolismo , Oócitos/metabolismo , Oogênese , Proteômica/métodos , Espectrometria de Massas em Tandem/métodos
17.
Chemosphere ; 231: 528-537, 2019 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-31151013

RESUMO

Fluoride, an anionic pollutant, is possibly to be found in excessive concentrations especially in groundwaters and can show detrimental effects on human health, in concentrations higher than the commonly applied legislation limit of 1.5 mg/L The most commonly applied method for water de-fluoridation is performed by Al-based coagulants, which however presents some important limitations, such as the applied relatively high dosage, producing rather excessive amounts of chemical sludge. In this study, the use of novel pre-polymerized Al-based coagulants was examined, regarding their efficiency towards fluoride removal, as compared with the conventionally applied AlCl3. The novel coagulants were characterized by measuring the main physico-chemical properties, the aluminum species distribution, the zeta potential, the particles' size distribution and the produced flocs' sizes. The results showed that the Mg-containing coagulant (PSiFAC-Mg30-10-15) was the most efficient, when applied in pH values relevant to fluoride-containing groundwaters; it was also the only coagulant, which increases its efficiency at pH values > 7. The uptake capacity of coagulants, regarding fluoride, to reach the residual/equilibrium concentration limit of 1.5 mg F/L (Q1.5-value) at the pH value 7.0 ±â€¯0.1 were found 170, 134 and 94 mg F/g Al for the cases of PSiFAC-Mg30-10-15, AlCl3·6H2O and PSiFAC-Na1.5-10-15, respectively. Accordingly, at the pH value 7.8 ±â€¯0.2 the Q1.5-values were found 189, 118 and 41 mg F/g Al for the same coagulants; whereas considering the residual aluminum concentration this was ranged at 15 ±â€¯5, 25 ±â€¯5 and 30 ±â€¯5 µg Al/L, respectively. In addition, (beneficial) increase of residual magnesium concentration, when applying the coagulant PSiFAC-Mg30-10-15 was 15 ±â€¯5 mg/L.


Assuntos
Fluoretos/química , Poluentes Químicos da Água/química , Purificação da Água/métodos , Alumínio/química , Fluoretos/análise , Polimerização , Esgotos , Água , Poluentes Químicos da Água/análise
18.
Membranes (Basel) ; 8(3)2018 Aug 16.
Artigo em Inglês | MEDLINE | ID: mdl-30115865

RESUMO

Next to the pore size distribution, surface charge is considered to be one main factor in the separation performance of ultrafiltration (UF) membranes. By applying an external surface potential onto an electro-conductive UF membrane, electrostatic induced rejection was investigated. This study introduces in a first part a relatively simple but yet not reported technology of membrane modification with direct current sputter deposition of ultrathin (15 nm) highly conductive gold layers. In a second part, characterization of the gold-coated UF flat sheet membrane with a molecular weight cut-off (MWCO) of 150 kDa is presented. Membrane parameters as contact angle (hydrophobicity), pure water permeability, MWCO, scanning electron microscopy imaging, zeta potential, surface conductivity and cyclic voltammetry of the virgin and the modified membrane are compared. Due to the coating, a high surface conductivity of 107 S m-1 was realized. Permeability of the modified membrane decreased by 40% but MWCO and contact angle remained almost unchanged. In a third part, cross-flow filtration experiments with negative charged Suwannee River Natural Organic Matter (SRNOM) are conducted at different cathodic and anodic applied potentials, different pH values (pH 4, 7, 10) and ionic strengths (0, 1, 10 mmol L-1). SRNOM rejection of not externally charged membrane was 28% in cross-flow and 5% in dead-end mode. Externally negative charged membrane (-1.5 V vs. Ag/AgCl) reached rejection of 64% which was close to the performance of commercial UF membrane with MWCO of 5 kDa. High ionic strengths or low pH of feed reduced the effect of electrostatic rejection.

19.
Sci Rep ; 8(1): 7937, 2018 05 21.
Artigo em Inglês | MEDLINE | ID: mdl-29784986

RESUMO

The volume of molecular observations on human diseases in public databases is continuously increasing at accelerating rates. A bottleneck is their computational integration into a coherent description, from which researchers may derive new well-founded hypotheses. Also, the need to integrate data from different technologies (genetics, coding and regulatory RNA, proteomics) emerged in order to identify biomarkers for early diagnosis and prognosis of complex diseases and therefore facilitating the development of novel treatment approaches. We propose here a workflow for the integrative transcriptomic description of the molecular pathology in Parkinsons's Disease (PD), including suggestions of compounds normalizing disease-induced transcriptional changes as a paradigmatic example. We integrated gene expression profiles, miRNA signatures, and publicly available regulatory databases to specify a partial model of the molecular pathophysiology of PD. Six genetic driver elements (2 genes and 4 miRNAs) and several functional network modules that are associated with PD were identified. Functional modules were assessed for their statistical significance, cellular functional homogeneity, literature evidence, and normalizing small molecules. In summary, our workflow for the joint regulatory analysis of coding and non-coding RNA, has the potential to yield clinically as well as biologically relevant information, as demonstrated here on PD data.


Assuntos
Antiparkinsonianos/farmacologia , Redes Reguladoras de Genes/efeitos dos fármacos , MicroRNAs/genética , Doença de Parkinson/patologia , RNA Mensageiro/genética , Bibliotecas de Moléculas Pequenas/farmacologia , Transcriptoma , Perfilação da Expressão Gênica , Humanos , Doença de Parkinson/tratamento farmacológico , Doença de Parkinson/genética , Patologia Molecular , Fatores de Transcrição/genética , Fatores de Transcrição/metabolismo , Fluxo de Trabalho
20.
Immunity ; 48(3): 570-583.e8, 2018 03 20.
Artigo em Inglês | MEDLINE | ID: mdl-29562203

RESUMO

Polymorphisms in NFKB1 that diminish its expression have been linked to human inflammatory diseases and increased risk for epithelial cancers. The underlying mechanisms are unknown, and the link is perplexing given that NF-κB signaling reportedly typically exerts pro-tumorigenic activity. Here we have shown that NF-κB1 deficiency, even loss of a single allele, resulted in spontaneous invasive gastric cancer (GC) in mice that mirrored the histopathological progression of human intestinal-type gastric adenocarcinoma. Bone marrow chimeras revealed that NF-κB1 exerted tumor suppressive functions in both epithelial and hematopoietic cells. RNA-seq analysis showed that NF-κB1 deficiency resulted in aberrant JAK-STAT signaling, which dysregulated expression of effectors of inflammation, antigen presentation, and immune checkpoints. Concomitant loss of STAT1 prevented these immune abnormalities and GC development. These findings provide mechanistic insight into how polymorphisms that attenuate NFKB1 expression predispose humans to epithelial cancers, highlighting the pro-tumorigenic activity of STAT1 and identifying targetable vulnerabilities in GC.


Assuntos
Regulação Neoplásica da Expressão Gênica , Inflamação/genética , Inflamação/metabolismo , NF-kappa B/deficiência , Fator de Transcrição STAT1/metabolismo , Neoplasias Gástricas/genética , Neoplasias Gástricas/metabolismo , Animais , Apresentação de Antígeno/imunologia , Células da Medula Óssea/metabolismo , Células da Medula Óssea/patologia , Transformação Celular Neoplásica/genética , Transformação Celular Neoplásica/metabolismo , Modelos Animais de Doenças , Células Epiteliais/metabolismo , Células Epiteliais/patologia , Redes Reguladoras de Genes , Humanos , Inflamação/patologia , Camundongos , Camundongos Knockout , Fator de Transcrição STAT1/deficiência , Neoplasias Gástricas/imunologia , Neoplasias Gástricas/patologia
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