Opportunistic sightings of manta rays on Brazil's Amazon Coast.

Little is known about the ecology and distribution of mobulid rays along Brazil's extensive coastline. Here we report opportunistic sightings of manta rays (Mobula cf. birostris) in the Brazilian Amazon estuaries and the Great Amazon Reef System. These sightings consist of manta ray individuals stranded in tide pools, caught in artisanal fisheries, and footage obtained with a submersible. Future investigations on the spatial, temporal, and environmental drivers of manta rays' distribution on the northern Brazilian coast and the threats posed by fishing gear are warranted.

Spawning ecology of the Saint Paul's Gregory Stegastes sanctipauli, a damselfish endemic to the remote St Peter and St Paul's Archipelago.

We studied the spawning ecology of Stegastes sanctipauli, a damselfish endemic to the small and remote St Peter and St Paul's Archipelago (Brazil), aiming to determine the main correlates of reproductive success, as inferred from rates of egg losses along a spawning season. New clutches appeared mostly in the last quarter moon, when egg predation intensified. Predation by heterospecifics, particularly Halichoeres radiatus (Linnaeus, 1758), accounted for most egg losses, while filial cannibalism showed negligible influence. Predation pressure was highest for larger nests with higher initial density of eggs. Hatching of eggs occurred close to the new moon (i.e., ~5 days after spawning). Most nests occur in shallow reefs (<16 m depth), where main food resources for adults (turf algae) are concentrated, but abundance of egg predators, particularly H. radiatus, is also highest. This latter result suggests that the spawning activity of S. sanctipauli is influenced by the trade-offs between food accessibility by adults and egg predation risk. The patterns recorded here are similar to those known for other tropical damselfish species and may reflect strategies for attenuating predation pressure over new fry and eggs.

Insights on the evolution of the living Great Amazon Reef System, equatorial West Atlantic.

The Great Amazon Reef (GARS) is an extensive mesophotic reef ecosystem between Brazil and the Caribbean. Despite being considered as one of the most important mesophotic reef ecosystems of the South Atlantic, recent criticism on the existence of a living reef in the Amazon River mouth was raised by some scientists and politicians. The region is coveted for large-scale projects for oil and gas exploration. Here, we add to the increasing knowledge about the GARS by exploring evolutionary aspects of the reef using primary and secondary information on radiocarbon dating from carbonate samples. The results obtained demonstrate that the reef is alive and growing, with living organisms inhabiting the GARS in its totality. Additional studies on net reef growth, habitat diversity, and associated biodiversity are urgently needed to help reconcile economic activities and biodiversity conservation.

Benthic reef assemblages of the Fernando de Noronha Archipelago, tropical South-west Atlantic: Effects of depth, wave exposure and cross-shelf positioning.

Oceanic islands can be relatively isolated from overfishing and pollution sources, but they are often extremely vulnerable to climate and anthropogenic stress due to their small size and unique assemblages that may rely on a limited larval supply for replenishment. Vulnerability may be especially high when these islands bear permanent human populations or are subjected to regular or intermittent fishing. Since the late 1970's, Brazil has been establishing marine protected areas (MPAs) around its four oceanic island groups, which concentrate high endemism levels and are considered peripheral outposts of the Brazilian Biogeographic Province. In 2018, the Brazilian legally marine protected area increased >10-fold, but most of the ~1,000,000 km2 of MPAs around Brazil's oceanic islands are still unknown and unprotected. Here, we provide the first detailed quantitative baseline of benthic reef assemblages, including shallow and mesophotic zones, of the Fernando de Noronha Archipelago (FNA). The archipelago is partially protected as a no-take MPA and recognized by the UNESCO as a World Heritage Site, but also represents the only Brazilian oceanic island with a large permanent human population (3,000 people), mass tourism (up to 90,000 people per year) and a permanent small-scale fishing community. The influence of depth, wave exposure, and distance from the island and shelf edge on the structure of benthic assemblages was assessed from benthic photoquadrats obtained in 12 sites distributed in the lee and windward shores of the archipelago. Unique assemblages and discriminating species were identified using Multivariate Regression Trees, and environmental drivers of dominant assemblages' components were evaluated using Boosted Regression Trees. A total of 128 benthic taxa were recorded and 5 distinct assemblages were identified. Distance to the insular slope, depth and exposure were the main drivers of assemblages' differentiation. Our results represent an important baseline for evaluating changes in benthic assemblages due to increased local and global stressors.

Metagenomics of Coral Reefs Under Phase Shift and High Hydrodynamics.

Local and global stressors have affected coral reef ecosystems worldwide. Switches from coral to algal dominance states and microbialization are the major processes underlying the global decline of coral reefs. However, most of the knowledge concerning microbialization has not considered physical disturbances (e.g., typhoons, waves, and currents). Southern Japan reef systems have developed under extreme physical disturbances. Here, we present analyses of a three-year investigation on the coral reefs of Ishigaki Island that comprised benthic and fish surveys, water quality analyses, metagenomics and microbial abundance data. At the four studied sites, inorganic nutrient concentrations were high and exceeded eutrophication thresholds. The dissolved organic carbon (DOC) concentration (up to 233.3 µM) and microbial abundance (up to 2.5 × 105 cell/mL) values were relatively high. The highest vibrio counts coincided with the highest turf cover (∼55-85%) and the lowest coral cover (∼4.4-10.2%) and fish biomass (0.06 individuals/m2). Microbiome compositions were similar among all sites and were dominated by heterotrophs. Our data suggest that a synergic effect among several regional stressors are driving coral decline. In a high hydrodynamics reef environment, high algal/turf cover, stimulated by eutrophication and low fish abundance due to overfishing, promote microbialization. Together with crown-of-thorns starfish (COTS) outbreaks and possible of climate changes impacts, theses coral reefs are likely to collapse.

Reef fishes of the Anchieta Island State Park, Southwestern Atlantic, Brazil / Peixes recifais do Parque Estadual da Ilha Anchieta, Sudoeste do Atlântico, Brasil

Abstract This paper presents a checklist of the reef fish fauna of the Anchieta Island State Park, a no-take zone in which no extractive activities are allowed, in Ubatuba, Southeastern Brazil. Data was obtained between 2011 and 2013, mainly through underwater observations with snorkelling and SCUBA, and secondarily using scientific fishing (trawling). Published and unpublished data were also verified and compiled. A total of 103 reef fish species, distributed in 78 genus and 50 families was recorded. Haemulidae was the richest family (n=7 species), followed by Epinephelidae (n=6), Pomacentridae, Carangidae and Tetraodontidae (n= 4 each). Haemulon was also the most speciose genera (n=5), followed by Stegastes, Acanthurus and Mycteroperca (n=3 each). Sixty-nine species (67%) are included in global and regional Red Lists. Twenty-five species (24.2%) are within the categories Critically Endangered (CR), Endangered (EN), Vulnerable (VU) and Near-Threathened (NT). The network of Marine Protected Areas in Southeastern Brazil is still incipient, and the considerable number of threatened species in the Anchieta Island State Park clearly indicates the importance of the study area for the conservation of coastal and reef fishes.

Resumo Este artigo apresenta uma lista de espécies de peixes recifais do Parque Estadual da Ilha Anchieta, uma área na qual nenhuma atividade extrativista é permitida, em Ubatuba, Sudeste do Brasil. Os dados foram coletados entre 2011 e 2013, principalmente por observações subaquáticas com o uso de mergulhos livres e autônomos e, secundariamente, através de pescaria científica (arrasto). Dados publicados e não publicados também foram verificados e compilados. Foram registradas 103 espécies de peixes recifais distribuídas em 78 gêneros e 50 famílias. Haemulidae foi a família com maior número de espécies (n=7 espécies), seguida por Epinephelidae (n=6), Pomacentridae, Carangidae e Tetraodontidae (n=4 cada). Os gêneros com maior número de espécies foram Haemulon (n=5) e Stegastes¸ Acanthurus e Mycteroperca (n=3 cada). Sessenta e nove espécies (67%) estão inclusas em listas vermelhas de espécies ameaçadas globais e regionais. Vinte e cinco espécies (24,2%) são classificadas nas categorias Criticamente em Perigo (CR), Em Perigo (EN), Vulnerável (VU) e Quase Ameaçadas (NT). A rede de Áreas Marinhas Protegidas no Sudeste do Brasil ainda é incipiente e o considerável número de espécies ameaçadas no Parque Estadual da Ilha Anchieta indica claramente a importância da área de estudo para a conservação de peixes recifais e costeiros.

Carbonate Production by Benthic Communities on Shallow Coralgal Reefs of Abrolhos Bank, Brazil.

The abundance of reef builders, non-builders and the calcium carbonate produced by communities established in Calcification Accretion Units (CAUs) were determined in three Abrolhos Bank shallow reefs during the period from 2012 to 2014. In addition, the seawater temperature, the irradiance, and the amount and composition of the sediments were determined. The inner and outer reef arcs were compared. CAUs located on the inner reef shelf were under the influence of terrigenous sediments. On the outer reefs, the sediments were composed primarily of marine biogenic carbonates. The mean carbonate production in shallow reefs of Abrolhos was 579 ± 98 g m-2 y-1. The builder community was dominated by crustose coralline algae, while the non-builder community was dominated by turf. A marine heat wave was detected during the summer of 2013-2014, and the number of consecutive days with a temperature above or below the summer mean was positively correlated with the turf cover increase. The mean carbonate production of the shallow reefs of Abrolhos Bank was greater than the estimated carbonate production measured for artificial structures on several other shallow reefs of the world. The calcimass was higher than the non-calcareous mass, suggesting that the Abrolhos reefs are still in a positive carbonate production balance. Given that marine heat waves produce an increase of turf cover on the shallow reefs of the Abrolhos, a decrease in the cover represented by reef builders and shifting carbonate production are expected in the near future.

BaMBa: towards the integrated management of Brazilian marine environmental data.

A new open access database, Brazilian Marine Biodiversity (BaMBa) (https://marinebiodiversity.lncc.br), was developed in order to maintain large datasets from the Brazilian marine environment. Essentially, any environmental information can be added to BaMBa. Certified datasets obtained from integrated holistic studies, comprising physical-chemical parameters, -omics, microbiology, benthic and fish surveys can be deposited in the new database, enabling scientific, industrial and governmental policies and actions to be undertaken on marine resources. There is a significant number of databases, however BaMBa is the only integrated database resource both supported by a government initiative and exclusive for marine data. BaMBa is linked to the Information System on Brazilian Biodiversity (SiBBr, http://www.sibbr.gov.br/) and will offer opportunities for improved governance of marine resources and scientists' integration. Database URL: http://marinebiodiversity.lncc.br.

Culturable heterotrophic bacteria associated with healthy and bleached scleractinian Madracis decactis and the fireworm Hermodice carunculata from the remote St. Peter and St. Paul Archipelago, Brazil.

We report on the first characterization of the culturable heterotrophic bacteria of the scleractinian Madracis decactis. In addition, we characterized the culturable bacteria associated with the fireworm Hermodice carunculata, observed predating partially bleached coral colonies. Our study was carried out in the remote St. Peter and St. Paul Archipelago (SPSPA), Mid-Atlantic Ridge, Brazil. We constituted a 403 isolates collection and subsequently characterized it by means of pyrH and 16S rRNA partial sequences. We identified Photobacterium, Bacillus, and Vibrio species as members of the culturable microbiota of healthy M. decactis. V. campbellii, V. harveyi, V. communis, and V. maritimus were the most commonly found Vibrio species in healthy corals, representing more than 60 % of all vibrio isolates. Most of the vibrios isolated from the fireworm's tissues (n = 143; >90 %) were identified as V. shiloi. However, we did not recover V. shiloi from bleached M. decactis. Instead, we isolated V. communis, a novel Photobacterium species, Bacillus, Kocuria, and Pseudovibrio, suggesting a possible role of other facultative anaerobic bacteria and/or environmental features (such as water quality) in the onset of bleaching in SPSPA's M. decactis.