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The Global Specialized Polio Laboratory at CDC supports the Global Poliovirus Laboratory Network with environmental surveillance (ES) to detect the presence of vaccine strain polioviruses, vaccine-derived polioviruses, and wild polioviruses in high-risk countries. Environmental sampling provides valuable supplementary information, particularly in areas with gaps in surveillance of acute flaccid paralysis (AFP) mainly in children less than 15 years. In collaboration with Guatemala's National Health Laboratory (Laboratorio Nacional de Salud Guatemala), monthly sewage collections allowed screening enterovirus (EV) presence without incurring additional costs for sample collection, transport, or concentration. Murine recombinant fibroblast L-cells (L20B) and human rhabdomyosarcoma (RD) cells are used for the isolation of polioviruses following a standard detection algorithm. Though non-polio-Enteroviruses (NPEV) can be isolated, the algorithm is optimized for the detection of polioviruses. To explore if other EV's are present in sewage not found through standard methods, five additional cell lines were piloted in a small-scale experiment, and next-generation sequencing (NGS) was used for the identification of any EV types. Human lung fibroblast cells (HLF) were selected based on their ability to isolate EV-A genus. Sewage concentrates collected between 2020-2021 were isolated in HLF cells and any cytopathic effect positive isolates used for NGS. A large variety of EVs, including echoviruses 1, 3, 6, 7, 11, 13, 18, 19, 25, 29; coxsackievirus A13, B2, and B5, EV-C99, EVB, and polioviruses (Sabin 1 and 3) were identified through genomic typing in NGS. When the EV genotypes were compared by phylogenetic analysis, it showed many EV's were genomically like viruses previously isolated from ES collected in Haiti. Enterovirus occurrence did not follow a seasonality, but more diverse EV types were found in ES collection sites with lower populations. Using the additional cell line in the existing poliovirus ES algorithm may add value by providing data about EV circulation, without additional sample collection or processing. Next-generation sequencing closed gaps in knowledge providing molecular epidemiological information on multiple EV types and full genome sequences of EVs present in wastewater in Guatemala.
Assuntos
Enterovirus , Fibroblastos , Águas Residuárias , Humanos , Enterovirus/genética , Enterovirus/isolamento & purificação , Águas Residuárias/virologia , Fibroblastos/virologia , Guatemala/epidemiologia , Pulmão/virologia , Pulmão/citologia , Epidemiologia Molecular , Linhagem Celular , Filogenia , Animais , Poliovirus/genética , Poliovirus/isolamento & purificação , Esgotos/virologia , Camundongos , Infecções por Enterovirus/virologia , Infecções por Enterovirus/epidemiologiaRESUMO
Objective: To estimate the early impact of coronavirus disease 2019 (COVID-19) vaccination on cases in older populations in four countries (Chile, Colombia, Guatemala, and the United States of America), and on deaths in Chile and Guatemala. Methods: Data were obtained from national databases of confirmed COVID-19 cases and deaths and vaccinations between 1 July 2020 and 31 August 2021. In each country, pre- and post-vaccination incidence ratios were calculated for COVID-19 cases and deaths in prioritized groups (50-59, 60-69, and ≥70 years) compared with those in the reference group (<50 years). Vaccination effect was calculated as the percentage change in incidence ratios between pre- and post-vaccination periods. Results: The ratio of COVID-19 cases in those aged ≥50 years to those aged <50 years decreased significantly after vaccine implementation by 9.8% (95% CI: 9.5 to 10.1%) in Chile, 22.5% (95% CI: 22.0 to 23.1%) in Colombia, 20.8% (95% CI: 20.6 to 21.1%) in Guatemala, and 7.8% (95% CI: 7.6 to 7.9%) in the USA. Reductions in the ratio were highest in adults aged ≥70 years. The effect of vaccination on deaths, with time lags incorporated, was highest in the age group ≥70 years in both Chile and Guatemala: 14.4% (95% CI: 11.4 to 17.4%) and 37.3% (95% CI: 30.9 to 43.7%), respectively. Conclusions: COVID-19 vaccination significantly reduced morbidity in the early post-vaccination period in targeted groups. In the context of a global pandemic with limited vaccine availability, prioritization strategies are important to reduce the burden of disease in high-risk age groups.
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Guatemala implemented wastewater-based poliovirus surveillance in 2018, and three genetically unrelated vaccine-derived polioviruses (VDPVs) were detected in 2019. The Ministry of Health (MoH) response included event investigation through institutional and community retrospective case searches for acute flaccid paralysis (AFP) during 2018-2020 and a bivalent oral polio/measles, mumps, and rubella vaccination campaign in September 2019. This response was reviewed by an international expert team in July 2021. During the campaign, 93% of children 6 months <7 years of age received a polio-containing vaccine dose. No AFP cases were detected in the community search; institutional retrospective searches found 37% of unreported AFP cases in 2018â2020. No additional VDPV was isolated from wastewater. No evidence of circulating VDPV was found; the 3 isolated VDPVs were classified as ambiguous VDPVs by the international team of experts. These detections highlight risk for poliomyelitis reemergence in countries with low polio vaccine coverage.
Assuntos
Poliomielite , Poliovirus , Criança , Humanos , Vacina Antipólio Oral/efeitos adversos , Águas Residuárias , Guatemala/epidemiologia , Estudos Retrospectivos , Poliomielite/epidemiologia , Poliomielite/prevenção & controle , Monitoramento AmbientalRESUMO
ABSTRACT Objective. To estimate the early impact of coronavirus disease 2019 (COVID-19) vaccination on cases in older populations in four countries (Chile, Colombia, Guatemala, and the United States of America), and on deaths in Chile and Guatemala. Methods. Data were obtained from national databases of confirmed COVID-19 cases and deaths and vaccinations between 1 July 2020 and 31 August 2021. In each country, pre- and post-vaccination incidence ratios were calculated for COVID-19 cases and deaths in prioritized groups (50-59, 60-69, and ≥70 years) compared with those in the reference group (<50 years). Vaccination effect was calculated as the percentage change in incidence ratios between pre- and post-vaccination periods. Results. The ratio of COVID-19 cases in those aged ≥50 years to those aged <50 years decreased significantly after vaccine implementation by 9.8% (95% CI: 9.5 to 10.1%) in Chile, 22.5% (95% CI: 22.0 to 23.1%) in Colombia, 20.8% (95% CI: 20.6 to 21.1%) in Guatemala, and 7.8% (95% CI: 7.6 to 7.9%) in the USA. Reductions in the ratio were highest in adults aged ≥70 years. The effect of vaccination on deaths, with time lags incorporated, was highest in the age group ≥70 years in both Chile and Guatemala: 14.4% (95% CI: 11.4 to 17.4%) and 37.3% (95% CI: 30.9 to 43.7%), respectively. Conclusions. COVID-19 vaccination significantly reduced morbidity in the early post-vaccination period in targeted groups. In the context of a global pandemic with limited vaccine availability, prioritization strategies are important to reduce the burden of disease in high-risk age groups.
RESUMEN Objetivo. Estimar el impacto temprano sobre los casos de enfermedad por coronavirus 2019 (COVID-19) obtenido con la vacunación contra la COVID-19 en los grupos poblacionales de edad avanzada en cuatro países (Chile, Colombia, Estados Unidos de América y Guatemala), así como el efecto en la mortalidad en Chile y Guatemala. Métodos. Los datos se obtuvieron a partir de las bases de datos nacionales sobre vacunaciones y sobre casos de COVID-19 y muertes debidas a esta enfermedad entre el 1 de julio del 2020 y el 31 de agosto del 2021. Para cada país, se calcularon las razones de incidencia de casos de COVID-19 y de muertes por COVID-19 anteriores y posteriores a la vacunación en los grupos priorizados (50-59, 60-69 y ≥70 años) en comparación con las del grupo de referencia (<50 años). Se calculó el efecto de la vacunación expresado en forma de variación porcentual de la razón de las incidencias entre el período anterior y el posterior a la vacunación. Resultados. Tras la introducción de la vacuna, la razón de los casos de COVID-19 entre las personas ≥50 años y las <50 disminuyó significativamente en un 9,8% (IC del 95%: 9,5% a 10,1%) en Chile, en un 22,5% (IC del 95%: 22,0% a 23,1%) en Colombia, en un 7,8% (IC del 95%: 7,6% a 7,9%) en Estados Unidos de América y en un 20,8% (IC del 95%: 20,6% a 21,1%) en Guatemala. Las reducciones de la razón fueron máximas en las personas adultas ≥70 años. El efecto de la vacunación sobre las muertes, una vez incorporados los desfases cronológicos, fue máximo en el grupo de personas ≥70 años, tanto en Chile como en Guatemala: 14,4% (IC 95%: 11,4% a 17,4%) y 37,3% (IC 95%: 30,9% a 43,7%), respectivamente. Conclusiones. La vacunación contra la COVID-19 redujo significativamente la morbilidad en el período inmediato posterior a la vacunación en los grupos destinatarios. En el contexto de una pandemia con disponibilidad limitada de vacunas a nivel mundial, las estrategias de asignación de prioridades son un factor importante para reducir la carga de morbilidad en los grupos etarios de alto riesgo.
RESUMO Objetivo. Estimar o impacto inicial da vacinação contra a doença pelo coronavírus 2019 (COVID-19) nos casos em populações idosas de quatro países (Chile, Colômbia, Guatemala e Estados Unidos da América) e nas mortes no Chile e na Guatemala. Métodos. Os dados foram obtidos de bancos de dados nacionais de casos e mortes confirmados por COVID-19 e de vacinações entre 1º de julho de 2020 e 31 de agosto de 2021. Em cada país, foram calculadas taxas de incidência pré e pós-vacinação de casos e mortes por COVID-19 em grupos priorizados (50 a 59, 60 a 69 e ≥70 anos) em comparação com o grupo de referência (<50 anos). O efeito da vacinação foi calculado como a mudança percentual nas taxas de incidência entre os períodos pré e pós-vacinação. Resultados. A incidência de casos de COVID-19 em pessoas com idade ≥50 anos em relação às com idade <50 anos diminuiu significativamente após a implementação da vacina, em 9,8% (IC 95%: 9,5 a 10,1%) no Chile, 22,5% (IC 95%: 22,0 a 23,1%) na Colômbia, 20,8% (IC 95%: 20,6 a 21,1%) na Guatemala e 7,8% (IC 95%: 7,6 a 7,9%) nos EUA. As reduções na incidência foram maiores em adultos com idade ≥70 anos. O efeito da vacinação sobre as mortes, com defasagens temporais incorporadas, foi maior na faixa etária ≥70 anos no Chile e na Guatemala, 14,4% (IC de 95%: 11,4 a 17,4%) e 37,3% (IC de 95%: 30,9 a 43,7%), respectivamente. Conclusões. A vacinação contra a COVID-19 reduziu significativamente a morbidade no início do período pós-vacinação nos grupos-alvo. No contexto de uma pandemia mundial com disponibilidade limitada de vacinas, estratégias de priorização são importantes para reduzir a carga de doença em grupos etários de alto risco.
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The COVID-19 pandemic has accelerated the growth of digital health tools. Although a number of different tools exist to support field data collection in the context of outbreak response, they have not been sufficient. This prompted the World Health Organization (WHO) to collaborate with the Global Outbreak Alert and Response Network (GOARN) and GOARN partners to develop a comprehensive system, Go.Data. Go.Data, a digital tool for outbreak response has simplified how countries operationalize and monitor case and contact data. Since the start of the pandemic, WHO and GOARN partners have provided support to Go.Data projects in 65 countries and territories, yet the demand by countries to have documented success cases of Go.Data implementations continues to grow. This viewpoint documents the successful Go.Data implementation frameworks in two countries, Argentina and Guatemala and an academic institution, the University of Texas at Austin.
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Objectives: To measure protocol adherence and antigen-based detection tests (AgDT) negative predictive value after 3 months of massive use as a diagnostic tool for COVID-19 in Guatemala. Methods: The study period included nasopharyngeal swabs taken between March 12 and August 31, 2020, which results were entered in the national COVID-19 information system. Proportional increase in testing between one month before and one month after the introduction of AgDT (May 9-June 8 vs. June 9-July 8) was measured. Results: After AgDT introduction, there was a 139% increase in SARS-CoV-2 testing. Between June 9 and August 31, 7.8% of 110 657 AgDT-negative patients had follow-up RT-PCR testing. Of them, 30% were RT-PCR positive. Conclusions: While introducing AgDT improved access to diagnostics, ensuring the availability of timely RT-PCR capacities to confirm diagnosis is also key.
Objetivos: Evaluar la adherencia al protocolo y el valor predictivo negativo de las pruebas de detección basadas en antígeno (AgDT) después de 3 meses de uso masivo como método diagnóstico para la COVID-19 en Guatemala. Métodos: Se estudiaron hisopados nasofaríngeos tomados entre el 12 de marzo y el 31 de agosto de 2020, cuyos resultados constaban en el sistema de información nacional de COVID-19. Se midió el aumento proporcional del número de pruebas entre un mes antes y un mes después de la introducción de las AgDT (9 de mayo a 8 de junio, frente a 9 de junio a 8 de julio). Resultados: Después de la introducción de AgDT hubo un aumento del 139% en el número de pruebas de SARS-CoV-2. Entre el 9 de junio y el 31 de agosto, el 7,8% de 110 657 pacientes negativos según una AgDT se sometieron a una prueba de seguimiento con RT-PCR. De ellos, el 30% presentó una RT-PCR positiva. Conclusiones: Aunque la introducción de AgDT mejoró el acceso al diagnóstico, también es clave asegurar la disponibilidad oportuna de RT-PCR para confirmar el diagnóstico.
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OBJECTIVES: We describe an outbreak of spotted fever group (SFG) rickettsiosis that occurred in 2007 in a farming community in southeastern Guatemala. We identified 17 cases of an acute febrile illness, among which 10, including two fatalities, were confirmed or probable cases of rickettsial disease (case-fatality proportion 12%). METHODS: PCR, a microimmunofluorescence assay (IFA), and Western blotting were performed on patient samples, and PCR was performed on ticks. RESULTS: Using an indirect IFA, seven of 16 (44%) ill persons tested had both IgM and IgG antibodies reacting with one or more Rickettsia spp antigens; the other nine (56%) had only IgM titers or were seronegative. Antibodies to SFG protein and lipopolysaccharide were detected by Western blotting with antigens of Rickettsia typhi, Rickettsia rickettsii, and Rickettsia akari. Only one sample, from an ill person who died, tested positive by PCR for a SFG Rickettsia. PCR analysis of Amblyomma cajennense ticks from domestic animals in the area detected the presence of SFG Rickettsia DNA in one of 12 ticks collected. CONCLUSIONS: Further studies in Guatemala are warranted to establish the prevalence of rickettsioses and to fully characterize the identity of the etiologic agents and vectors.