Measuring the Structure of a Technology System for Directing Technological Transition.

Technological advancements have generated a "techno-sphere" within which all humans live. However, the capacity to direct technology development lags far behind technology development itself. This study deciphers the structural characteristics of a technology system using three pairs of features: systemicity and complexity (scalar), centrality and diversity (structural), and adaptability and inertia (structural); and at micro-, meso-, and macrolevels. By applying this approach in Chinese agricultural and water technology systems in the Yellow River Region and the Yangtze River Region from the beginning of agriculture in ≈8000 BC to the end of preindustrial agriculture in 1911, it is found that there exist trade-off relationships between the centrality and diversity of a technology system, there exist alternative dominations of adaptivity and inertia in development of a technology system, and there exist time-lag phenomena of change in a technology system between mesolevel and macrolevel. It is also identified that a larger-scale, more diverse and adaptive technology system is observed in the Yellow River Region whereas the technology system in the Yangtze River Region is more rapidly expanding in scale and mainly dominated by inertia. These discoveries will assist increasing the capacity of managing and directing technological transition in future.

Using a process-based model to understand dynamics of Chinese agricultural and water technology development from 8000 BC to 1911 AD.

Advancements in technology are inextricably bound to our society and the natural environment. However, how the development process of a technology system interacts with both remains unclear. We propose a process model to understand the complex dynamics among technology, society, and the environment via seven interactive elements: technologies, actors, receiving bodies, natural contexts, social contexts, temporal-spatial contexts, and outcomes. The model was applied to agricultural and water technology development in China from 8000 BC to 1911 AD. Our findings show that these elements did not play equally important roles in different periods of the development in ancient China, with social contexts most dominating during the earlier periods and both social and environmental concerns arising towards the later periods. The proposed model, by identifying the elements in the technology development that should be strengthened, can act as an analysis device to assist in reconfiguring a more sustainable socio-technological system.

Point mutations in a Drosophila P element abolish both P element-dependent silencing (PDS) of a transgene and repressor functions.

The P elements of Drosophila melanogaster are well-studied transposons with both mobilizing and repressor functions. P elements can also variably silence the expression of certain other transgenes through a phenomenon known as P element-dependent silencing (PDS). To examine the role of the P repressor in PDS, we have induced, isolated, and characterized 22 point mutations in an archetype P element called P[SalI]89D. All mutations showed a loss in the ability to silence one or more assays for the PDS phenotype. These mutants also lost the ability to induce the suppression of variegation in P[hsp26-pt-T]39C-12, another P element-dependent phenotype. A subgroup of 11 mutations was further assayed for their ability to act as a P repressor and silence the P element promoter transcribing a lacZ ( + ) gene, and this function was lost as well. Taken together, this study supports a model of PDS acting through protein interactions, not RNA, with heterochromatic proteins to modify the extent of variegation seen in PDS. Furthermore, the common loss of functions for PDS and P repressor silencing (from another P promoter) argues for a common role of the repressor. This makes the PDS model a good system for examining P repressor functions and how they relate to transposon-mediated gene silencing in general.

Drosophila Activin- and the Activin-like product Dawdle function redundantly to regulate proliferation in the larval brain.

The Drosophila Activin-like ligands Activin-beta and Dawdle control several aspects of neuronal morphogenesis, including mushroom body remodeling, dorsal neuron morphogenesis and motoneuron axon guidance. Here we show that the same two ligands act redundantly through the Activin receptor Babo and its transcriptional mediator Smad2 (Smox), to regulate neuroblast numbers and proliferation rates in the developing larval brain. Blocking this pathway results in the development of larvae with small brains and aberrant photoreceptor axon targeting, and restoring babo function in neuroblasts rescued these mutant phenotypes. These results suggest that the Activin signaling pathway is required for producing the proper number of neurons to enable normal connection of incoming photoreceptor axons to their targets. Furthermore, as the Activin pathway plays a key role in regulating propagation of mouse and human embryonic stem cells, our observation that it also regulates neuroblast numbers and proliferation in Drosophila suggests that involvement of Activins in controlling stem cell propagation may be a common regulatory feature of this family of TGF-beta-type ligands.

Mutation analysis of Drosophila dikar/CG32394, homologue of the chromatin-remodelling gene CECR2.

The mammalian CECR2 protein contains a highly conserved bromodomain and forms a chromatin-remodelling complex with the ISWI homologue SNF2L. Mutation of the mouse CECR2 homologue results in a neural tube defect. Here we describe the characterization of the Drosophila melanogaster homologue of CECR2. Originally annotated as 2 genes, dikar and CG32394 now appear to encode both a long dikar/CG32394 transcript homologous to CECR2 and a truncated transcript missing the bromodomain. This truncated transcript may be specific to Diptera, as it is predicted from the genomic sequences of several other dipteran species but it is not predicted in the honey bee, Apis mellifera, and it is not found in mammals. Five different P element-mediated 5' deletions of the Drosophila dikar gene were generated. All mutants were homozygous-viable and the 3 mutants examined further displayed continued, albeit aberrant, transcription of dikar/CG32394. In a previous study, a dikar insertion mutation was associated with long-term memory deficits. However, the 2 deletion mutants tested here showed normal long-term memory, suggesting that the memory deficit associated with the dikar P element insertion is not due to disruption of dikar. No genetic interaction was seen between Iswi and dikar mutations. This study therefore suggests that the lack of a visible phenotype in dikar mutants is due to compensation by a second gene, possibly acf1.

Quantitative assessment of the tetracycline resistance gene pool in cheese samples by real-time TaqMan PCR.

A TaqMan real-time PCR assay was developed to quantify the tetS gene pool present in retail cheeses. This protocol offers a rapid, specific, sensitive, and culture-independent method for assessing antibiotic resistance genes in food samples rich in fats and proteins.

Assessment of environmental factors on Listeria monocytogenes Scott A inlA gene expression by relative quantitative Taqman real-time reverse transcriptase PCR.

Several virulence factors are involved in Listeria monocytogenes pathogenicity. L. monocytogenes internalins, particularly internalin A, are required for bacterial adhesion to and invasion of human intestinal epithelial cells. The expression of internalins is thus related to virulence. Identification of conditions involved in regulating the expression of L. monocytogenes virulence factors is essential for developing targeted strategies to control listeriosis incidence and improving therapeutic approaches. The primary aim of this study was to develop a quantitative real-time reverse transcriptase PCR platform to study the impact of environmental factors on L. monocytogenes Scott A virulence factor expression, particularly in potentially complex ecosystems. A Taqman PCR-based, rapid quantitative gene expression evaluation method was established with the L. monocytogenes ribosomal protein L4 encoding gene used as an internal standard. Our data suggest that inlA expression is influenced by food composition and temperature, indicating that certain food processing or storage conditions, such as the use of lactic and acetic acids at common storage temperatures, could affect the expression of L. monocytogenes virulence factor.