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1.
Microbes Environ ; 32(3): 210-218, 2017 Sep 27.
Artigo em Inglês | MEDLINE | ID: mdl-28724850

RESUMO

A cellular approach combining Direct Viable Counting and Fluorescent In Situ Hybridization using a one-step multiple-probe technique and Solid Phase Cytometry (DVC-FISH-SPC) was developed to monitor total viable vibrios and cover the detection of a large diversity of vibrios. FISH combined three probes in the same assay and targeted sequences located at different positions on the 16S rRNA of Vibrio and Aliivibrio members. We performed a 10-month in situ study to investigate the weekly dynamics of viable vibrios relative to culturable counts at two northwestern Mediterranean coastal sites, and identified the key physicochemical factors for their occurrence in water using a multivariate analysis. Total viable and culturable cell counts showed the same temporal pattern during the warmer season, whereas the ratios between both methods were inverted during the colder seasons (<15°C), indicating that some of the vibrio community had entered into a viable but non-culturable (VBNC) state. We confirmed that Seawater Surface Temperature explained 51-62% of the total variance in culturable counts, and also showed that the occurrence of viable vibrios is controlled by two variables, pheopigment (15%) and phosphate (12%) concentrations, suggesting that other unidentified factors play a role in maintaining viability.


Assuntos
Água do Mar/microbiologia , Vibrio/isolamento & purificação , Contagem de Colônia Microbiana , Hibridização in Situ Fluorescente , Viabilidade Microbiana , RNA Ribossômico 16S/genética , Análise Espaço-Temporal , Temperatura
2.
Int J Environ Res Public Health ; 12(3): 2967-83, 2015 Mar 10.
Artigo em Inglês | MEDLINE | ID: mdl-25764059

RESUMO

A two-year monitoring program of Cryptosporidium parvum oocysts, Giardia duodenalis cysts, Escherichia coli, Clostridium perfringens spores and adenovirus was conducted in three large rivers in France used for recreational activities and as a resource for drinking water production. Fifty-liter river water and one thousand-liter tap water samples were concentrated using hollow-fiber ultrafiltration and analyzed by molecular biology or laser-scanning cytometry. In order to evaluate watershed land use influence on microorganism concentration changes, occurrence and seasonality of microorganisms were studied. The highest concentrations of protozoan parasites and C. perfringens were found for one of the three sites, showing a high proportion of agricultural territories, forests and semi-natural environments, which may be partly attributable to soil leaching due to rainfall events. On the contrary, the highest concentrations of adenoviruses were found at the two other sites, probably due to strong urban activities. Health risk assessment was evaluated for each waterborne pathogen regarding exposure during recreational activities (for a single or five bathing events during the summer). The calculated risk was lower than 0.5% for parasites and varied from 1% to 42% for adenovirus. A theoretical assessment of microorganism removal during the drinking water treatment process was also performed, and it showed that an absence of microorganisms could be expected in finished drinking water. This hypothesis was confirmed since all tested tap water samples were negative for each studied microorganism, resulting in a risk for drinking water consumption lower than 0.01% for parasites and lower than 0.5% for adenovirus.


Assuntos
Adenoviridae/isolamento & purificação , Clostridium perfringens/isolamento & purificação , Cryptosporidium parvum/isolamento & purificação , Escherichia coli/isolamento & purificação , Giardia lamblia/isolamento & purificação , Rios/microbiologia , Microbiologia da Água , Agricultura , Água Potável/microbiologia , França , Humanos , Oocistos , Recreação , Medição de Risco , Estações do Ano , Purificação da Água , Qualidade da Água , Doenças Transmitidas pela Água/microbiologia
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