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1.
Magn Reson Chem ; 57(10): 805-817, 2019 08.
Artigo em Inglês | MEDLINE | ID: mdl-30604576

RESUMO

With the availability of commercial field-cycling relaxometers together with progress of home-built instruments nuclear magnetic resonance relaxometry has gained new momentum as a method of investigating the dynamics in viscous liquids and polymer melts. The method provides the frequency dependence of the spin-lattice relaxation rate. In the case of protons, one distinguishes intramolecular and intermolecular relaxation pathways. Whereas the intramolecular contribution prevails at high frequencies and reflects rotational dynamics, the often ignored intermolecular relaxation contribution dominates at low-frequency and provides access to translational dynamics. A universal low-frequencies dispersion law holds which in pure systems allows determining the diffusion coefficient in a straightforward way. In addition, the rotational time constant is extracted from the high-frequency relaxation contribution. This is demonstrated for simple and ionic liquids and for polymer melts.

2.
J Am Chem Soc ; 138(32): 10365-72, 2016 08 17.
Artigo em Inglês | MEDLINE | ID: mdl-27434647

RESUMO

Molecular motion of biopolymers in vivo is known to be strongly influenced by the high concentration of organic matter inside cells, usually referred to as crowding conditions. To elucidate the effect of intermolecular interactions on Brownian motion of proteins, we performed (1)H pulsed-field gradient NMR and fluorescence correlation spectroscopy (FCS) experiments combined with small-angle X-ray scattering (SAXS) and viscosity measurements for three proteins, αB-crystalline (αBc), bovine serum albumin, and hen egg-white lysozyme (HEWL) in aqueous solution. Our results demonstrate that long-time translational diffusion quantitatively follows the expected increase of macro-viscosity upon increasing the protein concentration in all cases, while rotational diffusion as assessed by polarized FCS and previous multi-frequency (1)H NMR relaxometry experiments reveals protein-specific behavior spanning the full range between the limiting cases of full decoupling from (αBc) and full coupling to (HEWL) the macro-viscosity. SAXS was used to study the interactions between the proteins in solution, whereby it is shown that the three cases cover the range between a weakly interacting hard-sphere system (αBc) and screened Coulomb repulsion combined with short-range attraction (HEWL). Our results, as well as insights from the recent literature, suggest that the unusual rotational-translational coupling may be due to anisotropic interactions originating from hydrodynamic shape effects combined with high charge and possibly a patchy charge distribution.


Assuntos
Transporte Proteico , Proteínas/química , Animais , Bovinos , Galinhas , Difusão , Clara de Ovo/química , Hidrodinâmica , Espectroscopia de Ressonância Magnética , Muramidase/química , Rotação , Espalhamento de Radiação , Espalhamento a Baixo Ângulo , Albumina Sérica/química , Soroalbumina Bovina/química , Espectrometria de Fluorescência , Viscosidade , Difração de Raios X , Cadeia B de alfa-Cristalina/química , alfa-Cristalinas/química
3.
J Biomol NMR ; 63(4): 403-415, 2015 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-26582718

RESUMO

Inter-protein interactions in solution affect the auto-correlation function of Brownian tumbling not only in terms of a simple increase of the correlation time, they also lead to the appearance of a weak slow component ("long tail") of the correlation function due to a slowly changing local anisotropy of the microenvironment. The conventional protocol of correlation time estimation from the relaxation rate ratio R1/R2 assumes a single-component tumbling correlation function, and thus can provide incorrect results as soon as the "long tail" is of relevance. This effect, however, has been underestimated in many instances. In this work we present a detailed systematic study of the tumbling correlation function of two proteins, lysozyme and bovine serum albumin, at different concentrations and temperatures using proton field-cycling relaxometry combined with R1ρ and R2 measurements. Unlike high-field NMR relaxation methods, these techniques enable a detailed study of dynamics on a time scale longer than the normal protein tumbling correlation time and, thus, a reliable estimate of the parameters of the "long tail". In this work we analyze the concentration dependence of the intensity and correlation time of the slow component and perform simulations of high-field (15)N NMR relaxation data demonstrating the importance of taking the "long tail" in the analysis into account.


Assuntos
Proteínas Aviárias/química , Muramidase/química , Animais , Galinhas , Óxido de Deutério/química , Ressonância Magnética Nuclear Biomolecular/métodos , Conformação Proteica , Soluções , Solventes/química
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