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1.
Mikrochim Acta ; 191(7): 407, 2024 06 19.
Artigo em Inglês | MEDLINE | ID: mdl-38898338

RESUMO

A smartphone-based electrochemical aptasensing platform was developed for the point-of-care testing (POCT) of carcinoembryonic antigen (CEA) based on the ferrocene (Fc) and PdPt@PCN-224 dual-signal labeled strategy. The prepared PdPt@PCN-224 nanocomposite showed a strong catalytic property for the reduction of H2O2. Phosphate group-labeled aptamer could capture PdPt@PCN-224 by Zr-O-P bonds to form PdPt@PCN-224-P-Apt. Therefore, a dual signal labeled probe was formed by the hybridization between Fc-DNA and PdPt@PCN-224-P-Apt. The presence of CEA forced PdPt@PCN-224-P-Apt to leave the electrode surface due to the specific affinity, leading to the decrease of the reduction current of H2O2. At the same time, the Fc-DNA strand changed to hairpin structure, which made Fc closer to the electrode and resulted in the increase of the oxidation current of Fc. Thus, CEA can be accurately determined through both signals: the decrease of H2O2 reduction current and the increase of Fc oxidation current, which could avoid the false positive signal. Under the optimal conditions, the prepared aptasensor exhibited a wide linear range from 1 pg·mL-1 to 100 ng·mL-1 and low detection limits of 0.98 pg·mL-1 and 0.27 pg·mL-1 with Fc and PdPt@PCN-224 as signal labels, respectively. The aptasensor developed in this study has successfully demonstrated its capability to detect CEA in real human serum samples. These findings suggest that the proposed sensing platform will hold great potential for clinical tumor diagnosis and monitoring.


Assuntos
Aptâmeros de Nucleotídeos , Técnicas Biossensoriais , Antígeno Carcinoembrionário , Técnicas Eletroquímicas , Compostos Ferrosos , Peróxido de Hidrogênio , Limite de Detecção , Paládio , Testes Imediatos , Smartphone , Antígeno Carcinoembrionário/sangue , Antígeno Carcinoembrionário/análise , Aptâmeros de Nucleotídeos/química , Técnicas Eletroquímicas/métodos , Técnicas Eletroquímicas/instrumentação , Humanos , Técnicas Biossensoriais/métodos , Peróxido de Hidrogênio/química , Paládio/química , Compostos Ferrosos/química , Metalocenos/química , Platina/química
2.
Biodivers Data J ; 12: e113979, 2024.
Artigo em Inglês | MEDLINE | ID: mdl-38348181

RESUMO

Asian warty newts, genus Paramesotriton, are endemic to southern China and northern Vietnam. Despite the achievements in biodiversity, molecular systematics and biogeography of species in this genus, population genetic diversity studies are lacking due to the lack of economical and available genetic markers. In this study, we developed 17 highly polymorphic microsatellite loci from RAD simplified genomic data for the Asian warty newts, genus Paramesotriton and successfully completed cross-species amplification tests on 20 samples of four species of Paramesotriton. These microsatellite markers can be used as important tools to study population genetic structure, levels of gene flow, population differentiation, mating systems and landscape genetics within the genus Paramesotriton and, thus, to make scientific conservation decisions and actions for the conservation of these rare and endangered amphibians.

3.
Huan Jing Ke Xue ; 45(1): 194-206, 2024 Jan 08.
Artigo em Chinês | MEDLINE | ID: mdl-38216471

RESUMO

Beihai City is a typical coastal city where groundwater provides a strong support for social and economic development. Studies on the hydrochemical characteristics and formation mechanism in Beihai City play an important role in the scientific management of water resources and coastal ecological environment protection. In this study, we revealed the main hydrogeochemical processes controlling groundwater quality by means of groundwater survey and water sample collection in the western region of Hepu Basin, Beihai City, combined with hydrochemistry and isotope theories and methods. The results showed that groundwater had the remarkable features of low pH value and low mineralization degree. For pore water, hydrochemistry type by primarily NO3 type water and concentrations of Na+ and Cl- were modestly increased along the flow path. Ca-HCO3, Ca-Cl·HCO3, Ca·Na-HCO3, and Na-Cl·HCO3 types were predominant in fissure water. The groundwater was of meteoric origin, hydrogeochemical evolutions were mainly affected by water-rock interactions, cation exchange, and anthropogenic activities. Na+, K+, and Cl- were mainly derived from evaporite and silicate rocks; Ca2+, Mg2+, HCO3-, and SO42- were from carbonatite and evaporite; and NO3- principally arose from anthropogenic activities. This study suggests that the groundwater pollution prevention and control should be carried out as soon as possible in the area where the NO3 type water occurs to avoid the further deterioration of water quality.

4.
Lab Chip ; 24(2): 367-374, 2024 01 17.
Artigo em Inglês | MEDLINE | ID: mdl-38126214

RESUMO

Carcinoembryonic antigen (CEA) is a biomarker of high expression in cancer cells. Highly sensitive and selective detection of CEA holds significant clinical value in the diagnosis, monitoring and efficacy evaluation of malignant tumors. In this work, a smartphone-based electrochemical point-of-care testing (POCT) platform for the detection of CEA was developed based on a Zr6MOF signal amplification strategy. Ferrocene labeled DNA strands (Fc-DNA) were immobilized on Zr6MOFs to form a Fc-DNA/Zr6MOF signal probe. Double-stranded DNA (dsDNA) formed by complementary DNA (cDNA) and CEA aptamer was assembled on a screen-printed electrode via an Au-S bond. When CEA was added, the aptamer specifically bound with CEA, resulting in the exposure of cDNA. Then, Fc-DNA/Zr6MOF signal probes were introduced on the electrode surface through hybridization between Fc-DNA and cDNA. The detection of CEA was realized by measuring the electrochemical response of Fc. The POCT device was made by connecting a modified electrode with a smartphone through a Sensit Smart USB flash disk. Due to the signal amplification of Zr6MOFs, this POCT platform exhibited high sensitivity, wide linear range, and low detection limit for CEA detection. The developed POCT platform has been used for the detection of CEA in actual human serum samples with satisfactory results.


Assuntos
Aptâmeros de Nucleotídeos , Técnicas Biossensoriais , Humanos , Antígeno Carcinoembrionário , DNA Complementar , Smartphone , DNA/química , Aptâmeros de Nucleotídeos/química , Técnicas Eletroquímicas , Limite de Detecção , Ouro/química
5.
Ecol Evol ; 13(12): e10829, 2023 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-38145017

RESUMO

Asian warty treefrogs, genus Theloderma, are morphologically variable arboreal frogs endemic to Southeast Asia and Southern China. However, integrated systematic studies are lacking, and knowledge of the genus in terms of diversity, origin, and historical diversification remains limited. To address these knowledge gaps, we used three mitochondrial and five nuclear gene fragments to reconstruct the Theloderma phylogeny, estimate divergence times, and examine the biogeography of the genus. Phylogenetic and species delimitation analyses suggest that the genus Theloderma comprises three major clades corresponding to two subgenera and seven species groups, and mPTP identified at least 12 putative cryptic species, suggesting that species diversity has been underestimated. Biogeographic analyses indicated that most recent common ancestor of Theloderma originated in the Indochina Peninsula during the Middle Oligocene (ca. 27.77 Ma) and the splitting of Clade A to C occurred in the Late Oligocene (ca. 23.55-25.57 Ma). Current biogeographic patterns result from two distinct processes: in situ diversification in the Indochina Peninsula and dispersal in multiple areas, namely southward dispersal to the Malay Peninsula and Borneo, northeastward dispersal to Southern China, northward dispersal to the Himalayas, and dispersal from Southern China to the Indochina Peninsula. Ancestral character reconstruction suggests that the ancestor of Theloderma may have possessed a small body size, rough dorsal skin, and absence of vomerine teeth and hand webbing, and that these four characters have undergone multiple evolutions. Principal component analysis based on eight bioclimatic variables did not clearly distinguish the three major clades of Theloderma, suggesting that species in these clades may occupy similar climatic ecological niches. Our research highlights the importance of orogeny and paleoclimatic changes, in shaping amphibian biodiversity in mountain ecosystems.

6.
Zookeys ; 1180: 81-104, 2023.
Artigo em Inglês | MEDLINE | ID: mdl-37767522

RESUMO

In this work, a new species of the genus Oreonectes is described, named Oreonectesdamingshanensis Yu, Luo, Lan, Xiao & Zhou, sp. nov., collected from the Damingshan Mountains of the Guangxi Zhuang Autonomous Region, China. Phylogenetic trees constructed based on the mitochondrial Cyt b showed that the new species represents an independent evolutionary lineage, with uncorrected genetic distances (p-distance) from congeners ranging from 6.1% to 8.9%. Morphologically, the new species can be distinguished from five other species of the genus by a combination of characters. The discovery of this new species raises the number of known species of Oreonectes from five to six. Our study suggests that O.platycephalus may be a complex containing multiple species and that previously recorded areas need to be further delimited and reevaluated.

7.
Analyst ; 148(17): 4037-4043, 2023 Aug 21.
Artigo em Inglês | MEDLINE | ID: mdl-37522239

RESUMO

As a prognostic biomarker for breast cancer, human epidermal growth factor receptor 2 (HER-2) is of crucial diagnostic value. Here, a label-free electrochemical aptasensor was established for the ultrasensitive detection of HER-2 using a modified electrode of Bi-Sb alloy materials (Bi-Sb AMs). The performance of the aptasensor was enhanced greatly due to the introduction of Bi-Sb alloy materials (Bi-Sb AMs) with high conductivity. Furthermore, by integrating the aptasensor with the Sensit Smart U-disk electrochemical analyzer, the point-of-care testing (POCT) for HER-2 was realized. Under the optimal experimental parameters, the POCT analyzer showed a wide linear response from 0.01 pg mL-1 to 100 ng mL-1, with a low detection limit (LOD) of 5.96 fg mL-1 for the detection of HER-2. The presented POCT analyzer exhibited good specificity, stability, and reproducibility. Benefiting from the simple operation and rapid testing, the developed analyzer will have potential application in the prognostic diagnosis and treatment of breast cancer.


Assuntos
Aptâmeros de Nucleotídeos , Técnicas Biossensoriais , Humanos , Técnicas Eletroquímicas , Ligas , Reprodutibilidade dos Testes , Limite de Detecção , Ouro
8.
Plant Mol Biol ; 112(6): 309-323, 2023 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-37378835

RESUMO

Aerial root mucilage can enhance nitrogen fixation by providing sugar and low oxygen environment to the rhizosphere microbiome in Sierra Mixe maize. Aerial root mucilage has long been documented in sorghum (Sorghum bicolor), but little is known about the biological significance, genotypic variation, and genetic regulation of this biological process. In the present study, we found that a large variation of mucilage secretion capacity existed in a sorghum panel consisting of 146 accessions. Mucilage secretion occurred primarily in young aerial roots under adequately humid conditions but decreased or stopped in mature long aerial roots or under dry conditions. The main components of the mucilage-soluble were glucose and fructose, as revealed by sugar profiling of cultivated and wild sorghum. The mucilage secretion capacity of landrace grain sorghum was significantly higher than that of wild sorghum. Transcriptome analysis revealed that 1844 genes were upregulated and 2617 genes were downregulated in mucilage secreting roots. Amongst these 4461 differentially expressed genes, 82 genes belonged to glycosyltransferases and glucuronidation pathways. Sobic.010G120200, encoding a UDP-glycosyltransferase, was identified by both GWAS and transcriptome analysis as a candidate gene, which may be involved in the regulation of mucilage secretion in sorghum through a negative regulatory mechanism.


Assuntos
Sorghum , Sorghum/genética , Sorghum/metabolismo , Transcriptoma , Açúcares/metabolismo , Estudo de Associação Genômica Ampla , Polissacarídeos/metabolismo , Perfilação da Expressão Gênica , Grão Comestível/genética , Variação Genética
9.
FASEB J ; 37(7): e23034, 2023 07.
Artigo em Inglês | MEDLINE | ID: mdl-37341989

RESUMO

Animal behavioral tests are often conducted during the day. However, rodents are nocturnal animals and are primarily active at night. The aim of this study was to determine whether there are diurnal changes in cognitive and anxiety-like performance of mice following chronic sleep restriction (SR). We also investigated whether this phenotypic difference is related to the diurnal variation of glymphatic clearance of metabolic wastes. Mice received 9-day SR by the use of the modified rotating rod method, followed by the open field, elevated plus maze, and Y-maze tests conducted during the day and at night, respectively. Brain ß-amyloid (Aß) and tau protein levels, the polarity of aquaporin4 (AQP4), a functional marker of the glymphatic system, and glymphatic transport ability were also analyzed. SR mice exhibited cognitive impairment and anxiety-like behaviors during the day, but not at night. AQP4 polarity and glymphatic transport ability were higher during the day, with lower Aß1-42 , Aß1-40 , and P-Tau levels in the frontal cortex. These day-night differences were totally disrupted after SR. These results reveal the diurnal changes in behavioral performance after chronic SR, which may be related to circadian control of AQP4-mediated glymphatic clearance of toxic macromolecules from the brain.


Assuntos
Encéfalo , Sistema Glinfático , Camundongos , Animais , Encéfalo/metabolismo , Sistema Glinfático/metabolismo , Sono , Ansiedade , Cognição , Aquaporina 4/metabolismo
11.
Ecol Evol ; 12(12): e9545, 2022 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-36568866

RESUMO

The herpetofauna of the Indomalayan bioregion of Asia suffers from severe habitat loss, unsustainable harvesting, and lack of research and conservation. Here, we investigated the range-wide phylogeography of the endangered "eyed" turtles (genus Sacalia, including the Beale's Eyed Turtle S. bealei and the Four-eyed Turtle S. quadriocellata) and discovered a natural interspecific hybrid turtle population in China. Based on phylogeny of the mitochondrial Cytochrome b gene of 101 samples in this study and public data, three major clades and six subclades were identified: S. bealei (SBE) in eastern-southern China, east S. quadriocellata in South China (northern east [SQUen] and southern east [SQUes] subclades), and west S. quadriocellata mainly in Vietnam (northern west [SQUwn], central west [SQUwc], and southern west [SQUws] subclades). We sequenced 16 nuclear DNA loci of 87 samples from SBE, SQUen, SQUes, and SQUwn subclades. Population genetic clustering analysis suggested a structure similar to the mitochondrial phylogeny, where most samples were classified into four genetic clusters corresponding to the four mtDNA subclades. However, a proportion of samples carrying SQUen mtDNA haplotypes formed an additional distinct cluster SHY. Those samples are found in the contact zone of the two species bearing mosaic and intermediate morphological characteristics. We detected an admixed ancestry in SHY from SBE and SQUen that conformed to an intrapopulation breeding scenario for at least hundreds of generations after the initial hybrid event, leading to a conclusion that SHY is a distinct and near-panmictic population derived from natural interspecific hybridization. In addition, SQUes (Hainan Island endemic) is of special concern due to significant isolation and low genetic diversity. We suggest that seven evolutionarily significant units should be recognized to facilitate appropriate conservation actions. These findings also highlight the urgent need for further herpetological research and conservation in this region.

12.
Allergol Immunopathol (Madr) ; 50(6): 176-186, 2022.
Artigo em Inglês | MEDLINE | ID: mdl-36335462

RESUMO

BACKGROUND: Injury to the lung is a common, clinically serious inflammatory disease. However, its pathogenesis remains unclear, and the existing treatments, including cytokine therapy, stem cell therapy, and hormone therapy, are not completely effective in treating this disease. Dimethyl itaconate (DMI) is a surfactant with important anti-inflammatory effects. OBJECTIVE: The present study used alveolar type II (AT II) and bronchial epithelial cells as models to determine the role of DMI in lung injury. MATERIAL AND METHODS: First, the effects of DMI were established on the survival, inflammatory release, and apoptosis in lipopolysaccharide (LPS)-induced AT II and bronchial epithelial cells. The association between DMI and Sirtuin1 (SIRT1) was assessed using molecular docking. Next, by constructing interference plasmids to inhibit surfactant protein (SP)-A and SP-D expressions, the effect of DMI was observed on inflammatory release and apoptosis. RESULTS: The results revealed that DMI increased the survival rate and expression levels of SP-A, SP-D, and SIRT1, and inhibited inflammatory factors as well as apoptosis in LPS-induced cells. Furthermore, DMI could bind to SIRT1 to regulate SP-A and SP-D expressions. After SP-A and SP-D expressions were inhibited, the inhibitory effect of DMI was reversed on inflammatory release and apoptosis. CONCLUSION: The findings of the present study revealed that DMI inhibited LPS-induced inflammatory release and apoptosis in cells by targeting SIRT1 and then activating SP-A and SP-D. This novel insight into the pharmacological mechanism of DMI lays the foundation for its later use for alleviating lung injury.


Assuntos
Lesão Pulmonar , Surfactantes Pulmonares , Humanos , Lipopolissacarídeos/metabolismo , Lipopolissacarídeos/farmacologia , Surfactantes Pulmonares/metabolismo , Surfactantes Pulmonares/farmacologia , Proteína D Associada a Surfactante Pulmonar/metabolismo , Proteína D Associada a Surfactante Pulmonar/farmacologia , Sirtuína 1/metabolismo , Sirtuína 1/farmacologia , Lesão Pulmonar/metabolismo , Simulação de Acoplamento Molecular , Células Epiteliais/metabolismo , Proteína A Associada a Surfactante Pulmonar/metabolismo , Proteína A Associada a Surfactante Pulmonar/farmacologia , Apoptose , Tensoativos/metabolismo , Tensoativos/farmacologia
13.
Zool Res ; 43(5): 787-804, 2022 09 18.
Artigo em Inglês | MEDLINE | ID: mdl-35993131

RESUMO

The Paramesotriton Chang, 1935 genus of Asian warty newts is the second most diverse genus in the family Salamandridae, currently containing 14 recognized species from northern Vietnam to southwest-central and southern China. Although species of this genus have been included in previous phylogenetic studies, the origin and interspecific relationships of the genus are still not fully resolved, especially at key nodes in the phylogeny. In this study, we sequenced mitochondrial genomes and 32 nuclear genes from 27 samples belonging to 14 species to reconstruct the interspecific phylogenetic relationships within Paramesotriton and explore its historical biogeography in southern China. Both Bayesian inference and maximum-likelihood analyses highly supported the monophyly of Paramesotriton and its two recognized species groups ( P. caudopunctatus and P. chinensis groups) and further identified five hypothetical phylogenetic cryptic species. Biogeographic analyses indicated that Paramesotriton originated in southwestern China (Yunnan-Guizhou Plateau/South China) during the late Oligocene. The time of origin of Paramesotriton corresponded to the second uplift of the Himalayan/Qinghai-Xizang (Tibetan) Plateau (QTP), rapid lateral extrusion of Indochina, and formation of karst landscapes in southwestern China. Principal component analysis (PCA), independent sample t-tests, and niche differentiation using bioclimatic variables based on locations of occurrence suggested that Paramesotriton habitat conditions in the three current regions (West, South, and East) differ significantly, with different levels of climatic niche differentiation. Species distribution model (SDM) predictions indicated that the most suitable distribution areas for the P. caudopunctatus and P. chinensis species groups are western and southern/eastern areas of southern China. This study increases our knowledge of the taxonomy, biodiversity, origin, and suitable distribution areas of the genus Paramesotriton based on phylogenetic, biogeographic, and species distribution models.


Assuntos
Genoma Mitocondrial , Animais , Teorema de Bayes , China , Filogenia , Salamandridae/genética
14.
Zhongguo Dang Dai Er Ke Za Zhi ; 23(4): 356-362, 2021 Apr.
Artigo em Chinês | MEDLINE | ID: mdl-33840407

RESUMO

OBJECTIVE: To systematically evaluate the efficacy and safety of levetiracetam (LEV) versus phenytoin (PHT) as second-line drugs for the treatment of convulsive status epilepticus (CSE) in children. METHODS: English and Chinese electronic databases were searched for the randomized controlled trials comparing the efficacy and safety of LEV and PHT as second-line drugs for the treatment of childhood CSE. RevMan 5.3 software was used for data analysis. RESULTS: Seven studies with 1 434 children were included. The Meta analysis showed that compared with the PHT group, the LEV group achieved a significantly higher control rate of CSE (RR=1.12, 95%CI:1.00-1.24, P=0.05), but there was no significant difference between the two groups in the recurrence rate of epilepsy within 24 hours (RR=0.82, 95%CI:0.22-3.11, P=0.77) and the rate of further antiepileptic drug therapy (RR=0.97, 95%CI:0.64-1.45, P=0.87). There was no significant difference in the incidence rate of adverse events between the two groups (RR=0.77, 95%CI:0.55-1.09, P=0.15). CONCLUSIONS: LEV has a better clinical effect than PHT in the treatment of children with CSE and does not increase the incidence rate of adverse events.


Assuntos
Preparações Farmacêuticas , Estado Epiléptico , Anticonvulsivantes/efeitos adversos , Criança , Humanos , Levetiracetam/uso terapêutico , Fenitoína/efeitos adversos , Estado Epiléptico/tratamento farmacológico
16.
Huan Jing Ke Xue ; 42(5): 2213-2222, 2021 May 08.
Artigo em Chinês | MEDLINE | ID: mdl-33884790

RESUMO

Urban water is a significant part of the urban ecosystem. Therefore, a comprehensive evaluation method of the water environment was proposed based on domestic high-resolution images. The relationships between the spectral characteristics and water quality parameters of urban water were analyzed based on sampling in Nanjing, Wuxi, Changzhou, and Yangzhou from 2017 to 2019. An index named the U-FUI (urban Forel-Ule index) suitable for urban water based on GF-2 images was proposed to achieve the classification of urban water on the basis of the international standard chroma conversion model and the Forel-Ule index. Independent verification data showed that the recognition accuracy of the classification model could reach 72%. The results indicated that urban water can be classified into six classes from Ⅰ to Ⅵ, which represent water colors of blue, light green, dark green, yellow, yellowish brown, and dark grey, respectively, according to the U-FUI. Among them, the water quality of U-FUI Ⅰ water is good, but is rarely distributed in urban water. The concentrations of chlorophyll-a in U-FUI Ⅱ-Ⅲ water are higher than those of the other classes; the concentrations of total suspended solids, particularly inorganic suspended solids, of U-FUI Ⅳ-Ⅴ water are higher than those of the other classes; and the water quality of U-FUI Ⅵ water is poor and the water quality parameters are different from those of the other classes. Meanwhile, the method was successfully applied to the GF-2 image of Nanjing on April 9, 2018. The results showed that the urban water in Nanjing is mainly composed of U-FUI Ⅱ-Ⅳ water, whereas the distribution of U-FUI Ⅰ, Ⅴ, and Ⅵ water is lower in the city. The spatial distribution characteristics were consistent with the results of in-situ sampling in the same period.

17.
Huan Jing Ke Xue ; 41(11): 4924-4935, 2020 Nov 08.
Artigo em Chinês | MEDLINE | ID: mdl-33124236

RESUMO

Groundwater is an important source of water supply in the Leizhou Peninsula. In August 2018, five surface water samples, 18 shallow pore water samples, 14 middle-deep pore water samples, and 27 pore fissure water samples were collected in the Lingbei area, the northern part of the Leizhou Peninsula. Major ion concentrations, as well as H, O isotope composition (of δ18O and δ2H) were analyzed. The results show that groundwater pH values, total hardness, concentrations of K+, TDS, Cl-, and SO42- are low, while H2SiO3(aq) and NO3- concentrations are relatively high. For pores and fissures water, hydrochemical types are mainly Mg-Ca-HCO3, Mg-Ca-HCO3-Cl, and Cl- loadings are significantly increased along the flow path. Ca-Cl, Na-Ca-HCO3-Cl, and Na-Ca-Mg-HCO3-Cl types predominate in shallow pore water. For middle-deep pore water, the types are primarily Mg-Ca-HCO3, Na-Ca-Mg-HCO3, K-Na-HCO3-SO4, and concentrations of K+, Na+, Cl-, and SO42- are modestly increased along the flow path. We find that the groundwater is of meteoric origin, groundwater Cl- and Na+ originate from marine atmospheric precipitation, Mg+, Ca2+, and HCO3- are mainly derived from silicate weathering, and NO3- principally arises from chemical fertilizer. Shallow pore water and fissure pore water are affected by evaporation concentration, whereas cation exchange is important for middle-deep pore water. The milligram equivalent ratio of nitrate in groundwater reaches 28.3%. After taking into account the nitrate, 50.85% of the sampling water is NO3 type, and displays a pollution trend. Our results contribute to the sustainable utilization of groundwater in the study area and other similar areas.


Assuntos
Água Subterrânea , Poluentes Químicos da Água , Monitoramento Ambiental , Nitratos , Poluentes Químicos da Água/análise , Abastecimento de Água
18.
Zool Res ; 41(3): 341-344, 2020 May 18.
Artigo em Inglês | MEDLINE | ID: mdl-32274906

RESUMO

In mid-September 2018, during a field survey in Chiat'ung, Sanjiangyuan (Three-River-Source) Region, Tibetan Plateau, China, we discovered the first active breeding den of the Chinese mountain cat (Felis bieti), inhabited by one adult female and two kittens. Based on fieldwork over the following months, five breeding dens were discovered, and 33 sightings were recorded. In addition, at least five individuals were confirmed to inhabit this overlooked region, and much previously unknown information concerning this cat species and its ecology was revealed for the first time.


Assuntos
Comportamento Animal , Felis , Animais , Animais Selvagens , China
19.
BMC Genomics ; 21(1): 112, 2020 Jan 31.
Artigo em Inglês | MEDLINE | ID: mdl-32005168

RESUMO

BACKGROUND: In sorghum (Sorghum bicolor), one paramount breeding objective is to increase grain quality. The nutritional quality and end use value of sorghum grains are primarily influenced by the proportions of tannins, starch and proteins, but the genetic basis of these grain quality traits remains largely unknown. This study aimed to dissect the natural variation of sorghum grain quality traits and identify the underpinning genetic loci by genome-wide association study. RESULTS: Levels of starch, tannins and 17 amino acids were quantified in 196 diverse sorghum inbred lines, and 44 traits based on known metabolic pathways and biochemical interactions amongst the 17 amino acids calculated. A Genome-wide association study (GWAS) with 3,512,517 SNPs from re-sequencing data identified 14, 15 and 711 significant SNPs which represented 14, 14, 492 genetic loci associated with levels of tannins, starch and amino acids in sorghum grains, respectively. Amongst these significant SNPs, two SNPs were associated with tannin content on chromosome 4 and colocalized with three previously identified loci for Tannin1, and orthologs of Zm1 and TT16 genes. One SNP associated with starch content colocalized with sucrose phosphate synthase gene. Furthermore, homologues of opaque1 and opaque2 genes associated with amino acid content were identified. Using the KEGG pathway database, six and three candidate genes of tannins and starch were mapped into 12 and 3 metabolism pathways, respectively. Thirty-four candidate genes were mapped into 16 biosynthetic and catabolic pathways of amino acids. We finally reconstructed the biosynthetic pathways for aspartate and branched-chain amino acids based on 15 candidate genes identified in this study. CONCLUSION: Promising candidate genes associated with grain quality traits have been identified in the present study. Some of them colocalized with previously identified genetic regions, but novel candidate genes involved in various metabolic pathways which influence grain quality traits have been dissected. Our study acts as an entry point for further validation studies to elucidate the complex mechanisms controlling grain quality traits such as tannins, starch and amino acids in sorghum.


Assuntos
Redes Reguladoras de Genes , Estudo de Associação Genômica Ampla/métodos , Locos de Características Quantitativas , Sorghum/química , Mapeamento Cromossômico , Grão Comestível/química , Grão Comestível/genética , Grão Comestível/normas , Desequilíbrio de Ligação , Melhoramento Vegetal , Proteínas de Plantas/genética , Polimorfismo de Nucleotídeo Único , Análise de Sequência de DNA , Sorghum/genética , Amido/análise , Taninos/análise
20.
Iran J Public Health ; 49(12): 2240-2250, 2020 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-34178730

RESUMO

BACKGROUND: Interstitial lung disease (ILD) is a category of chronic lung diseases with more than 200 subtypes. Idiopathic interstitial pneumonia (IIP), systemic sclerosis (SSc) ILD, and familial interstitial pneumonia (FIP) are three major groups of lung diseases with different causes or with unknown causes. Mucin5B (MUC5B) belongs to the mucin family, which contribute to the lubricating and viscoelastic properties of the whole saliva, normal lung mucus, and cervical mucus. The association between MUC5B rs35705950 and ILDs risks has been widely studied. However, the results were inconclusive and inconsistent. METHODS: In the present meta-analysis, the database PubMed, Embase, Cochrane Central Register of Controlled Trials, CNKI and Chinese Biomedical Literature Database were searched till Aug 20th, 2018. Overall 16 publications with 28 studies, 76345 cases and 18402 controls were included. RESULTS: The results indicated a significant increase of overall IIP risk for TT genotype and T allele of the rs35705950 in all genetic models (TT vs GG, OR=9.11; TT vs GT+TT, OR=5.80; GT+TT vs GG, OR=4.34; T vs G, OR=4.03. P<0.0001). Subgroup analysis by subtypes of IIP revealed higher risks of TT genotype and T allele for IPF and iNSIP (P<0.05). A significant increase of FIP risk was also found for the TT genotype and T allele of the rs35705950 (TT vs GG, OR=17.08; GT+TT vs GG, OR=6.02; T vs G, OR=1.64.P<0.05). CONCLUSION: No significant relations existed between the rs35705950 and SSc-ILD risks. MUC5B rs35705950 might be a predictor for the susceptibility of IIP and FIP.

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