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1.
Bioorg Khim ; 19(3): 307-17, 1993 Mar.
Artigo em Russo | MEDLINE | ID: mdl-7683879

RESUMO

3'-Mercapto-2',3'-dideoxy-NTP were synthesized and tested as DNA chain terminating nucleotides. It is shown that the analogues selectively and irreversibly terminate DNA chain elongation by AMV and HIV reverse transcriptases and terminal deoxynucleotidyl transferase, whereas calf thymus alpha DNA polymerase, E. coli DNA polymerase I (Klenow fragment) and MLV reverse transcriptase do not use the nucleotide analogues as chain terminator substrates.


Assuntos
DNA/síntese química , Desoxirribonucleotídeos/síntese química , DNA Polimerase Dirigida por RNA/química , Animais , Vírus da Mieloblastose Aviária/enzimologia , Sequência de Bases , Bovinos , Desoxirribonucleotídeos/química , HIV/enzimologia , Dados de Sequência Molecular , Regiões Terminadoras Genéticas
2.
Mol Biol (Mosk) ; 26(5): 1063-79, 1992.
Artigo em Russo | MEDLINE | ID: mdl-1470173

RESUMO

Influence of rare codons upon gene expression in E. coli was investigated. The chimeric gene was created combining CAT gene and a fragment of the gene, encoding for alpha-domain of beta-galactosidase. The synthetic oligonucleotides were inserted in different parts of the chimeric gene. The constructed synthetic oligonucleotides encoded the same amino acid sequences and contained arginine codons AGG, AGA and CGT in various combinations. It was shown that the presence of rare arginine codons AGG and AGA in the template and their mutual arrangement significantly influence the level of gene expression. At the same time the presence of leucine, isoleucine, glycine and proline rare codons does not cause such an effect. Translation of AGGAGG and AGAAGA sequences was found to lead to the formation of a considerable amount of polypeptides of incomplete length. It was shown that the presence of such a cluster of rare codons effects on the length of specific mRNA.


Assuntos
Códon , Escherichia coli/genética , Expressão Gênica , Sequência de Aminoácidos , Sequência de Bases , Quimera , Cloranfenicol O-Acetiltransferase/genética , Eletroforese em Gel de Poliacrilamida , Dados de Sequência Molecular , Plasmídeos , beta-Galactosidase/genética
3.
Mol Biol (Mosk) ; 25(6): 1643-9, 1991.
Artigo em Russo | MEDLINE | ID: mdl-1813806

RESUMO

The genomic library of Mycoplasma gallisepticum was constructed and two clones, selected by hybridization on E. coli 16S rRNA, were analyzed. The restriction map of the clones indicate that both clones belong to the same region of the M. gallisepticum genome. The results of Southern hybridization with either E. coli 16S rRNA, or E. coli 23S rRNA, or oligonucleotide synthesized as a part of M. gallisepticum 5S rRNA, led to the conclusion that the unspliced rRNA operon was cloned. The order of genes in the operon is common for eubacteria: 16S-23S-5S. The tuf gene of M. gallisepticum was mapped inside the cloned region 5 kb upstream of 16S gene by hydridization on E. coli tufA gene and oligonucleotide synthesized on the basis of M. gallisepticum tuf gene sequence. The direction of transcription of the gene and the expected direction of transcription of the rRNA operon coincide.


Assuntos
Genes Bacterianos , Mycoplasma/genética , Óperon , RNA Ribossômico 16S/genética , Bacteriófagos/genética , Sequência de Bases , DNA Viral/genética , Escherichia coli/genética , Genes Virais , Biblioteca Genômica , Dados de Sequência Molecular , Hibridização de Ácido Nucleico , Mapeamento por Restrição , Transcrição Gênica
4.
Bioorg Khim ; 17(4): 504-9, 1991 Apr.
Artigo em Russo | MEDLINE | ID: mdl-1716104

RESUMO

3'-Mercapto-3'-deoxy-TTP was synthesized and tested as DNA chain terminator nucleotide for calf thymus alpha DNA polymerase, E. coli DNA polymerase I (Klenow fragment), terminal deoxyribonucleotidyltransferase (Bollum enzyme) and reverse transcriptase from AMV- and HIV-I-viruses. It was shown that the compound terminates DNA chain elongation by reverse transcriptases selectively and irreversibly. Other tested DNA polymerases do not use this nucleotide analogue as a substrate. 3'-Mercapto-3'-deoxythymidine was tested on lymphoblastoid T-cell line MT-4 with HIV-viruses and shown to suppress viruses as efficiently as 3'-azido-3'-deoxythymidine.


Assuntos
DNA Polimerase I/metabolismo , DNA/biossíntese , Nucleotídeos de Timina/farmacologia , Animais , Vírus da Mieloblastose Aviária/enzimologia , Sequência de Bases , Catálise , Bovinos , Linhagem Celular , DNA/efeitos dos fármacos , Eletroforese em Gel de Ágar , Escherichia coli/enzimologia , HIV-1/enzimologia , Dados de Sequência Molecular , Inibidores da Transcriptase Reversa
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