Temperature extremes of 2022 reduced carbon uptake by forests in Europe.

The year 2022 saw record breaking temperatures in Europe during both summer and fall. Similar to the recent 2018 drought, close to 30% (3.0 million km2) of the European continent was under severe summer drought. In 2022, the drought was located in central and southeastern Europe, contrasting the Northern-centered 2018 drought. We show, using multiple sets of observations, a reduction of net biospheric carbon uptake in summer (56-62 TgC) over the drought area. Specific sites in France even showed a widespread summertime carbon release by forests, additional to wildfires. Partial compensation (32%) for the decreased carbon uptake due to drought was offered by a warm autumn with prolonged biospheric carbon uptake. The severity of this second drought event in 5 years suggests drought-induced reduced carbon uptake to no longer be exceptional, and important to factor into Europe's developing plans for net-zero greenhouse gas emissions that rely on carbon uptake by forests.

Monitoring of carbon-water fluxes at Eurasian meteorological stations using random forest and remote sensing.

Simulating the carbon-water fluxes at more widely distributed meteorological stations based on the sparsely and unevenly distributed eddy covariance flux stations is needed to accurately understand the carbon-water cycle of terrestrial ecosystems. We established a new framework consisting of machine learning, determination coefficient (R2), Euclidean distance, and remote sensing (RS), to simulate the daily net ecosystem carbon dioxide exchange (NEE) and water flux (WF) of the Eurasian meteorological stations using a random forest model or/and RS. The daily NEE and WF datasets with RS-based information (NEE-RS and WF-RS) for 3774 and 4427 meteorological stations during 2002-2020 were produced, respectively. And the daily NEE and WF datasets without RS-based information (NEE-WRS and WF-WRS) for 4667 and 6763 meteorological stations during 1983-2018 were generated, respectively. For each meteorological station, the carbon-water fluxes meet accuracy requirements and have quasi-observational properties. These four carbon-water flux datasets have great potential to improve the assessments of the ecosystem carbon-water dynamics.

Modeled production, oxidation, and transport processes of wetland methane emissions in temperate, boreal, and Arctic regions.

Wetlands are the largest natural source of methane (CH4 ) to the atmosphere. The eddy covariance method provides robust measurements of net ecosystem exchange of CH4 , but interpreting its spatiotemporal variations is challenging due to the co-occurrence of CH4 production, oxidation, and transport dynamics. Here, we estimate these three processes using a data-model fusion approach across 25 wetlands in temperate, boreal, and Arctic regions. Our data-constrained model-iPEACE-reasonably reproduced CH4 emissions at 19 of the 25 sites with normalized root mean square error of 0.59, correlation coefficient of 0.82, and normalized standard deviation of 0.87. Among the three processes, CH4 production appeared to be the most important process, followed by oxidation in explaining inter-site variations in CH4 emissions. Based on a sensitivity analysis, CH4 emissions were generally more sensitive to decreased water table than to increased gross primary productivity or soil temperature. For periods with leaf area index (LAI) of ≥20% of its annual peak, plant-mediated transport appeared to be the major pathway for CH4 transport. Contributions from ebullition and diffusion were relatively high during low LAI (<20%) periods. The lag time between CH4 production and CH4 emissions tended to be short in fen sites (3 ± 2 days) and long in bog sites (13 ± 10 days). Based on a principal component analysis, we found that parameters for CH4 production, plant-mediated transport, and diffusion through water explained 77% of the variance in the parameters across the 19 sites, highlighting the importance of these parameters for predicting wetland CH4 emissions across biomes. These processes and associated parameters for CH4 emissions among and within the wetlands provide useful insights for interpreting observed net CH4 fluxes, estimating sensitivities to biophysical variables, and modeling global CH4 fluxes.

Screening New Xylanase Biocatalysts from the Mangrove Soil Diversity.

Mangrove sediments from New Caledonia were screened for xylanase sequences. One enzyme was selected and characterized both biochemically and for its industrial potential. Using a specific cDNA amplification method coupled with a MiSeq sequencing approach, the diversity of expressed genes encoding GH11 xylanases was investigated beneath Avicenia marina and Rhizophora stylosa trees during the wet and dry seasons and at two different sediment depths. GH11 xylanase diversity varied more according to tree species and season, than with respect to depth. One complete cDNA was selected (OFU29) and expressed in Pichia pastoris. The corresponding enzyme (called Xyn11-29) was biochemically characterized, revealing an optimal activity at 40-50 °C and at a pH of 5.5. Xyn11-29 was stable for 48 h at 35 °C, with a half-life of 1 h at 40 °C and in the pH range of 5.5-6. Xyn11-29 exhibited a high hydrolysis capacity on destarched wheat bran, with 40% and 16% of xylose and arabinose released after 24 h hydrolysis. Its activity on wheat straw was lower, with a release of 2.8% and 6.9% of xylose and arabinose, respectively. As the protein was isolated from mangrove sediments, the effect of sea salt on its activity was studied and discussed.

Determinism of nonadditive litter mixture effect on decomposition: Role of the moisture content of litters.

The mechanisms behind the plant litter mixture effect on decomposition are still difficult to disentangle. To tackle this issue, we used a model that specifically addresses the role of the litter moisture content. Our model predicts that when two litters interact in terms of water flow, the difference of evaporation rate between two litters can trigger a nonadditive mixture effect on decomposition. Water flows from the wettest to the driest litter, changing the reaction rates without changing the overall litter water content. The reaction rate of the litter receiving the water increases relatively more than the decrease in the reaction rate of the litter supplying the water, leading to a synergistic effect. Such water flow can keep the microbial biomass of both litter in a water content domain suitable to maintain decomposition activity. When applied to experimental data (Sphagnum rubellum and Molinia caerulea litters), the model is able to assess whether any nonadditive effect originates from water content variation alone or whether other factors have to be taken into account.

Biofilm and temperature controls on greenhouse gas (CO2 and CH4) emissions from a Rhizophora mangrove soil (New Caledonia).

Seasonal variations of CO2 and CH4 fluxes were investigated in a Rhizophora mangrove forest that develops under a semi-arid climate, in New Caledonia. Fluxes were measured using closed incubation chambers connected to a CRDS analyzer. They were performed during low tide at light, in the dark, and in the dark after having removed the top 1-2 mm of soil, which may contain biofilm. CO2 and CH4 fluxes ranged from 31.34 to 187.48 mmol m-2 day-1 and from 39.36 to 428.09 µmol m-2 day-1, respectively. Both CO2 and CH4 emissions showed a strong seasonal variability with higher fluxes measured during the warm season, due to an enhanced production of these two gases within the soil. Furthermore, CO2 fluxes were higher in the dark than at light, evidencing photosynthetic processes at the soil surface and thus the role of biofilm in the regulation of greenhouse gas emissions from mangrove soils. The mean δ13C-CO2 value of the CO2 fluxes measured was -19.76 ±â€¯1.19‰, which was depleted compared to the one emitted by root respiration (-22.32 ±â€¯1.06‰), leaf litter decomposition (-21.43 ±â€¯1.89‰) and organic matter degradation (-22.33 ±â€¯1.82‰). This result confirmed the use of the CO2 produced within the soil by the biofilm developing at its surface. After removing the top 1-2 mm of soil, both CO2 and CH4 fluxes increased. Enhancement of CH4 fluxes suggests that biofilm may act as a physical barrier to the transfer of GHG from the soil to the atmosphere. However, the δ13C-CO2 became more enriched, evidencing that the biofilm was not integrally removed, and that its partial removal resulted in physical disturbance that stimulated CO2 production. Therefore, this study provides useful information to understand the global implication of mangroves in climate change mitigation.

Effects of elevated atmospheric CO2 and increased tidal flooding on leaf gas-exchange parameters of two common mangrove species: Avicennia marina and Rhizophora stylosa.

In this study, we examined interactive effects of elevated atmospheric CO2, concentrations, and increased tidal flooding on two mangroves species, Avicennia marina and Rhizophora stylosa. Leaf gas-exchange parameters (photosynthesis, transpiration rates, water-use efficiency, stomatal conductance, and dark respiration rates) were measured monthly on more than 1000 two-year-old seedlings grown in greenhouses for 1 year. In addition, stomatal density and light curve responses were determined at the end of the experiment. Under elevated CO2 concentrations (800 ppm), the net photosynthetic rates were enhanced by more than 37% for A. marina and 45% for R. stylosa. This effect was more pronounced during the warm season, suggesting that an increase in global temperatures would further enhance the photosynthetic response of the considered species. Transpiration rates decreased by more than 15 and 8% for A. marina and R. stylosa, respectively. Consequently, water-use efficiency increased by 76% and 98% for A. marina and R. stylosa, respectively, for both species, which will improve drought resistance. These responses to elevated CO2 were minimized (by 5%) with longer flooding duration. Consequently, future increases of atmospheric CO2 may have a strong and positive effect on juveniles of A. marina and R. stylosa during the next century, which may not be suppressed by the augmentation of tidal flooding duration induced by sea-level rise. It is possible that this effect will enhance seedling dynamic by increasing photosynthesis, and therefore will facilitate their settlements in new area, extending the role of mangrove ecosystems in carbon sequestration and climate change mitigation.

Variability of CO2 emissions during the rearing cycle of a semi-intensive shrimp farm in a mangrove coastal zone (New Caledonia).

In New Caledonia, shrimp ponds are built not on cleared mangroves but on salt flats behind the mangroves. The objectives of this study were to determine the variability of CO2 fluxes from a semi-intensive shrimp pond during active and non-active periods of the farm and to determine the carbon dynamics from the upstream tidal creek to the downstream creek, which receives the farm's effluents. CO2 emissions from the active pond were estimated at 11.1 ±â€¯5.26 mmol CO2 m-2 d-1. By modifying the hydrodynamics of the creeks, farm practices also influenced CO2 emissions from both the upstream and downstream creeks. After tillage, all the organic carbon deposited at the pond bottom during the active period was mineralized, resulting in CO2 emissions to the atmosphere estimated at 7.9 TCO2 ha-1. Therefore, shrimp farming is an anthropogenic source of CO2 to the atmosphere, but suitable and optimized rearing practices limit these emissions.

Tidal variability of CO2 and CH4 emissions from the water column within a Rhizophora mangrove forest (New Caledonia).

We performed a preliminary study to quantify CO2 and CH4 emissions from the water column within a Rhizophora spp. mangrove forest. Mean CO2 and CH4 emissions during the studied period were 3.35±3.62mmolCm-2h-1 and 18.30±27.72µmolCm-2h-1, respectively. CO2 and CH4 emissions were highly variable and mainly driven by tides (flow/ebb, water column thickness, neap/spring). Indeed, an inverse relationship between the magnitude of the emissions and the thickness of the water column above the mangrove soil was observed. δ13CO2 values ranged from -26.88‰ to -8.6‰, suggesting a mixing between CO2-enriched pore waters and lagoon incoming waters. In addition, CO2 and CH4 emissions were significantly higher during ebb tides, mainly due to the progressive enrichment of the water column by diffusive fluxes as its residence time over the forest floor increased. Eventually, we observed higher CO2 and CH4 emissions during spring tides than during neap tides, combined to depleted δ13CO2 values, suggesting a higher contribution of soil-produced gases to the emissions. These higher emissions may result from higher renewable of the electron acceptor and enhanced exchange surface between the soil and the water column. This study shows that CO2 and CH4 emissions from the water column were not negligible and must be considered in future carbon budgets in mangroves.