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1.
Oper Dent ; 45(1): 80-91, 2020.
Artigo em Inglês | MEDLINE | ID: mdl-31226005

RESUMO

OBJECTIVE: The purpose of this study was to evaluate whether different enamel etching methods with reduced etching times would improve the bonding effectiveness of universal adhesives. METHODS AND MATERIALS: Three enamel etching methods, phosphoric acid ester monomer (PPM) etching, phosphoric acid (PPA) etching, and polyalkenoic acid (PLA) etching, and three universal adhesives, G-Premio Bond (GP), Prime&Bond elect (PE), and Scotchbond Universal Adhesive (SU), were evaluated. Initial bond strengths and fatigue strengths of universal adhesives to ground enamel and ground enamel etched for less than one, five, 10, and 15 seconds using different etching methods were determined. The bonded fatigue specimens were loaded using a sine wave at a frequency of 20 Hz for 50,000 cycles or until failure occurred with a staircase method. Atomic force micrograph (AFM) observations along with measurements of surface Ra roughness and modified surface area of enamel with different etching protocols were also conducted. RESULTS: The bond fatigue durability of universal adhesives to enamel with PPA etching from less than one to 15 seconds and PLA etching for 15 seconds was significantly higher than that to ground enamel. The bond fatigue durability to enamel with PPM etching was not increased compared with ground enamel. The surface Ra roughness and surface area obtained with AFM of enamel increased after PPA and PLA etching, and those values were significantly higher than those of ground enamel. Furthermore, surface Ra roughness and surface area with PPA etching were significantly higher than those with PLA etching. However, surface Ra roughness and surface area of enamel with PPM etching were similar to those of ground enamel regardless of etching time. CONCLUSION: PPA etching for less than one to 15 seconds and PLA etching for 15 seconds improve universal adhesive bonding, surface Ra roughness, and surface area of enamel. However, PPM etching is not effective, regardless of etching time, in improving bonds strengths, increasing surface roughness, and increasing surface area.


Assuntos
Condicionamento Ácido do Dente , Colagem Dentária , Cimentos Dentários , Esmalte Dentário , Teste de Materiais , Ácidos Fosfóricos , Cimentos de Resina , Resistência ao Cisalhamento , Propriedades de Superfície
2.
Micron ; 118: 50-57, 2019 03.
Artigo em Inglês | MEDLINE | ID: mdl-30590254

RESUMO

In this work, the porosity of the layers of calcified chicken eggshell (vertical crystal layer VCL, palisade layer PL and mammillary layer ML) was evaluated using atomic force microscopy (AFM) and image processing (IP). AFM topographic images were obtained from different locations for each layer and along the cross-section of calcified eggshell. Roughness parameters, surface area values, pore size and shape, surface porosity, area occupied by pores and pore density were obtained from AFM and IP. It was observed that the thickest layer (PL) exhibited the highest degree of porosity (surface porosity = 2.75 ± 1.68%, pore density = 162 ± 60 pores/µm2) when compared to the other two layers. In general, the pores located in all layers ("bubble pores") had circular shape and similar sizes. Measurements revealed a porosity gradient along the cross-section which varied with position, i.e., increasing surface porosity from the VCL towards the region of the PL closer to the ML, and decreasing surface porosity from this location towards the ML innermost surface. This suggests that the calcified eggshell has a sandwich-like structure where porosity may influence gas exchange and mechanical properties. The combination of AFM with IP presented here provides a simple and precise method to study porosity in calcified chicken eggshell, and this methodology could be used to examine other types of porous biological materials.

3.
Sci Rep ; 8(1): 9668, 2018 06 25.
Artigo em Inglês | MEDLINE | ID: mdl-29941916

RESUMO

Fruit and nut shells can exhibit high hardness and toughness. In the peninsula of Yucatan, Mexico, the fruit of the Cocoyol palm tree (Acrocomia mexicana) is well known to be very difficult to break. Its hardness has been documented since the 1500 s, and is even mentioned in the popular Maya legend The Dwarf of Uxmal. However, until now, no scientific studies quantifying the mechanical performance of the Cocoyol endocarp has been found in the literature to prove or disprove that this fruit shell is indeed "very hard". Here we report the mechanical properties, microstructure and hardness of this material. The mechanical measurements showed compressive strength values of up to ~150 and ~250 MPa under quasi-static and high strain rate loading conditions, respectively, and microhardness of up to ~0.36 GPa. Our findings reveal a complex hierarchical structure showing that the Cocoyol shell is a functionally graded material with distinctive layers along the radial directions. These findings demonstrate that structure-property relationships make this material hard and tough. The mechanical results and the microstructure presented herein encourage designing new types of bioinspired superior synthetic materials.


Assuntos
Arecaceae , Frutas , Fenômenos Mecânicos , Fenômenos Biomecânicos , Força Compressiva , Dureza
4.
Heliyon ; 3(6): e00329, 2017 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-28653042

RESUMO

The crumpling of precursor materials to form dense three dimensional geometries offers an attractive route towards the utilisation of minor-value waste materials. Crumple-forming results in a mesostructured system in which mechanical properties of the material are governed by complex cross-scale deformation mechanisms. Here we investigate the physical and mechanical properties of dense compacted structures fabricated by the confined uniaxial compression of a cellulose tissue to yield crumpled mesostructuring. A total of 25 specimens of various densities were tested under compression. Crumple formed specimens exhibited densities in the range 0.8-1.3 g cm-3, and showed high strength to weight characteristics, achieving ultimate compressive strength values of up to 200 MPa under both quasi-static and high strain rate loading conditions and deformation energy that compares well to engineering materials of similar density. The materials fabricated in this work and their mechanical attributes demonstrate the potential of crumple-forming approaches in the fabrication of novel energy-absorbing materials from low-cost precursors such as recycled paper. Stiffness and toughness of the materials exhibit density dependence suggesting this forming technique further allows controllable impact energy dissipation rates in dynamic applications.

5.
Artigo em Inglês | MEDLINE | ID: mdl-26465480

RESUMO

Using spheropolygon-based simulations and contact slope analysis, we investigate the effects of surface topography and atomic scale friction on the macroscopically observed friction between rigid blocks with fractal surface structures. From our mathematical derivation, the angle of macroscopic friction is the result of the sum of the angle of atomic friction and the slope angle between the contact surfaces. The latter is obtained from the determination of all possible contact slopes between the two surface profiles through an alternative signature function. Our theory is validated through numerical simulations of spheropolygons with fractal Koch surfaces and is applied to the description of frictional properties of Weierstrass-Mandelbrot surfaces. The agreement between simulations and theory suggests that for interpreting macroscopic frictional behavior, the descriptors of surface morphology should be defined from the signature function rather than from the slopes of the contacting surfaces.

6.
Micron ; 66: 37-46, 2014 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-25080275

RESUMO

When atomic force microscopy (AFM) is employed for in vivo study of immersed biological samples, the fluid medium presents additional complexities, not least of which is the hydrodynamic drag force due to viscous friction of the cantilever with the liquid. This force should be considered when interpreting experimental results and any calculated material properties. In this paper, a numerical model is presented to study the influence of the drag force on experimental data obtained from AFM measurements using computational fluid dynamics (CFD) simulation. The model provides quantification of the drag force in AFM measurements of soft specimens in fluids. The numerical predictions were compared with experimental data obtained using AFM with a V-shaped cantilever fitted with a pyramidal tip. Tip velocities ranging from 1.05 to 105 µm/s were employed in water, polyethylene glycol and glycerol with the platform approaching from a distance of 6000 nm. The model was also compared with an existing analytical model. Good agreement was observed between numerical results, experiments and analytical predictions. Accurate predictions were obtained without the need for extrapolation of experimental data. In addition, the model can be employed over the range of tip geometries and velocities typically utilized in AFM measurements.

7.
New Phytol ; 194(1): 254-263, 2012 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-22276783

RESUMO

• It is widely assumed that post-fire tree mortality results from necrosis of phloem and vascular cambium in stems, despite strong evidence that reduced xylem conductivity also plays an important role. • In this study, experiments with Populus balsamifera were used to demonstrate two mechanisms by which heat reduces the hydraulic conductivity of xylem: air seed cavitation and conduit wall deformation. Heat effects on air seed cavitation were quantified using air injection experiments that isolate potential temperature-dependent changes in sap surface tension and pit membrane pore diameters. Heat effects on conduit wall structure were demonstrated using air conductivity measurements and light microscopy. • Heating increased vulnerability to cavitation because sap surface tension varies inversely with temperature. Heating did not affect cavitation via changes in pit membrane pore diameters, but did cause significant reductions in xylem air conductivity that were associated with deformation of conduit walls (probably resulting from thermal softening of viscoelastic cell wall polymers). • Additional work is required to understand the relative roles of cavitation and deformation in the reduction of xylem conductivity, and how reduced xylem conductivity in roots, stems, and branches correlates and interacts with foliage and root necroses to cause tree mortality. Future research should also examine how heat necrosis of ray parenchyma cells affects refilling of embolisms that occur during and after the fire event.


Assuntos
Câmbio/fisiologia , Incêndios , Modelos Biológicos , Árvores/fisiologia , Xilema/fisiologia , Ar , Temperatura Alta , Permeabilidade , Populus/fisiologia , Pressão , Árvores/anatomia & histologia , Xilema/anatomia & histologia
9.
Aliment Pharmacol Ther ; 34(1): 76-82, 2011 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-21585407

RESUMO

BACKGROUND: Patients with cirrhosis and gastrointestinal haemorrhage are a complex group with high thirty-day mortality rates. AIM: To evaluate the quality of care delivered to patients admitted with gastrointestinal (GI) haemorrhage to a tertiary care centre before and after implementing a quality improvement initiative for better adherence to practice standards. METHODS: This is a prospective cohort study. All patients admitted to a tertiary care centre with a GI haemorrhage and known or suspected chronic liver disease were evaluated before and after the quality improvement initiative was implemented. Interventions to improve quality of care included the delivery of educational sessions for medical practitioners, and creation and implementation of standardised admission order sets. Quality of care measures included delivery of prophylactic antibiotics (PAs) within 24 h of admission, delivery of a somatostatin analogue (SA) and use of a proton pump inhibitor (PPI); optimal care was defined as receiving all three. Secondary outcomes included hospital length of stay (LOS) and 30-day readmission rate. RESULTS: In comparing the preintervention and postintervention groups, we found significant gains in delivering PAs (57% vs. 75%, P=0.05), SAs (54% vs. 76%, P=0.013) and overall optimal care (41% vs. 65%, P=0.008). Use of PPIs did not change and remained in accordance with guidelines (90% vs. 87%, P=0.67). Hospital LOS remained similar between the two groups (6.8 vs. 7.1, P=0.88), whereas the 30-day readmission decreased (41% vs. 13%, P=0.001). CONCLUSION: Implementation of quality improvement initiatives, such as targeted educational efforts and standardised order sets, can improve the quality of care delivered and patient outcomes in patients with cirrhosis and GI haemorrhage.


Assuntos
Atenção à Saúde/normas , Hemorragia Gastrointestinal/terapia , Cirrose Hepática/terapia , Melhoria de Qualidade/normas , Qualidade da Assistência à Saúde/normas , Adulto , Idoso , Idoso de 80 Anos ou mais , Atenção à Saúde/organização & administração , Feminino , Hospitais/normas , Humanos , Tempo de Internação , Masculino , Pessoa de Meia-Idade , Readmissão do Paciente , Estudos Prospectivos , Melhoria de Qualidade/organização & administração , Qualidade da Assistência à Saúde/organização & administração
10.
Theor Appl Genet ; 122(8): 1467-80, 2011 May.
Artigo em Inglês | MEDLINE | ID: mdl-21344184

RESUMO

A mapping population was created to detect quantitative trait loci (QTL) for resistance to stem rust caused by Puccinia graminis subsp. graminicola in Lolium perenne. A susceptible and a resistant plant were crossed to produce a pseudo-testcross population of 193 F(1) individuals. Markers were produced by the restriction-site associated DNA (RAD) process, which uses massively parallel and multiplexed sequencing of reduced-representation libraries. Additional simple sequence repeat (SSR) and sequence-tagged site (STS) markers were combined with the RAD markers to produce maps for the female (738 cM) and male (721 cM) parents. Stem rust phenotypes (number of pustules per plant) were determined in replicated greenhouse trials by inoculation with a field-collected, genetically heterogeneous population of urediniospores. The F(1) progeny displayed continuous distribution of phenotypes and transgressive segregation. We detected three resistance QTL. The most prominent QTL (qLpPg1) is located near 41 cM on linkage group (LG) 7 with a 2-LOD interval of 8 cM, and accounts for 30-38% of the stem rust phenotypic variance. QTL were detected also on LG1 (qLpPg2) and LG6 (qLpPg3), each accounting for approximately 10% of phenotypic variance. Alleles of loci closely linked to these QTL originated from the resistant parent for qLpPg1 and from both parents for qLpPg2 and qLpPg3. Observed quantitative nature of the resistance may be due to partial-resistance effects against all pathogen genotypes, or qualitative effects completely preventing infection by only some genotypes in the genetically mixed inoculum. RAD markers facilitated rapid construction of new genetic maps in this outcrossing species and will enable development of sequence-based markers linked to stem rust resistance in L. perenne.


Assuntos
Basidiomycota , Marcadores Genéticos/genética , Imunidade Inata/genética , Lolium/genética , Fenótipo , Doenças das Plantas/microbiologia , Locos de Características Quantitativas/genética , Mapeamento Cromossômico/métodos , Lolium/microbiologia , Repetições Minissatélites , Sitios de Sequências Rotuladas
11.
Protein Eng Des Sel ; 24(3): 321-31, 2011 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-21149386

RESUMO

Botulism, a disease of humans characterized by prolonged paralysis, is caused by botulinum neurotoxins (BoNTs), the most poisonous substances known. There are seven serotypes of BoNT (A-G) which differ from each other by 34-64% at the amino acid level. Each serotype is uniquely recognized by polyclonal antibodies, which originally were used to classify serotypes. To determine if there existed monoclonal antibodies (mAbs) capable of binding two or more serotypes, we evaluated the ability of 35 yeast-displayed single-chain variable fragment antibodies generated from vaccinated humans or mice for their ability to bind multiple BoNT serotypes. Two such clonally related human mAbs (1B18 and 4E17) were identified that bound BoNT serotype A (BoNT/A) and B or BoNT/A, B, E and F, respectively, with high affinity. Using molecular evolution techniques, it proved possible to both increase affinity and maintain cross-serotype reactivity for the 4E17 mAb. Both 1B18 and 4E17 bound to a relatively conserved epitope at the tip of the BoNT translocation domain. Immunoglobulin G constructed from affinity matured variants of 1B18 and 4E17 were evaluated for their ability to neutralize BoNT/B and E, respectively, in vivo. Both antibodies potently neutralized BoNT in vivo demonstrating that this epitope is functionally important in the intoxication pathway. Such cross-serotype binding and neutralizing mAbs should simplify the development of antibody-based BoNT diagnostics and therapeutics.


Assuntos
Anticorpos Monoclonais/imunologia , Anticorpos Neutralizantes/imunologia , Especificidade de Anticorpos , Toxinas Botulínicas/imunologia , Sequência de Aminoácidos , Animais , Anticorpos Monoclonais/química , Anticorpos Monoclonais/genética , Anticorpos Neutralizantes/química , Afinidade de Anticorpos , Toxinas Botulínicas/química , Células CHO , Sequência Conservada , Cricetinae , Cricetulus , Reações Cruzadas , Evolução Molecular Direcionada , Mapeamento de Epitopos , Epitopos/imunologia , Feminino , Humanos , Imunoglobulina G/imunologia , Camundongos , Dados de Sequência Molecular , Estrutura Terciária de Proteína , Anticorpos de Cadeia Única/genética , Anticorpos de Cadeia Única/imunologia
12.
J Food Prot ; 72(5): 1005-11, 2009 May.
Artigo em Inglês | MEDLINE | ID: mdl-19517727

RESUMO

The objective of this research project was to determine the usefulness of an egg antibody platform for producing materials for the detection and neutralization of botulinum type A neurotoxin. Yield estimates for detection and neutralizing antibodies produced using methods described were calculated. Antibody specific to botulinum toxoid A (aToxoid) and toxin A (aBoNT/A) was produced by immunizing hens with botulinum toxoid A (toxoid) followed by increasing amounts of botulinum neurotoxin A (BoNT/A) in Freund incomplete adjuvant. Egg yolks were extracted with polyethylene glycol (PEG) for antibody detection and neutralization experiments. A model aToxoid/toxoid immunoassay using only egg yolk antibody was developed and had a detection limit of 1 pg/ml of toxoid. In an indirect enzyme-linked immunosorbent assay of BoNT/A-specific antibody, the aBoNT/A contained more BoNT/A-specific antibody than did the aToxoid, and aBoNT/A was as effective as commercial rabbit antibody. The aToxoid provided no protection against BoNT/A in a standard mouse neutralization assay; however, 1 mg of PEG-extracted aBoNT/A neutralized 4,000 lethal doses of BoNT/A injected intraperitoneally. Based on these results, we calculated that in 1 month one hen could produce more than 100 liters of antibody detection reagents or enough antibody to neutralize approximately 11.6 million mouse lethal doses of botulinum toxin. Utilization of an egg antibody platform is potentially rapid (28 to 70 days) and scalable to kilogram quantities using current egg production facilities with as few as 1,000 hens.


Assuntos
Anticorpos Monoclonais , Toxinas Botulínicas Tipo A/isolamento & purificação , Gema de Ovo , Contaminação de Alimentos/análise , Animais , Especificidade de Anticorpos , Bioensaio , Toxinas Botulínicas Tipo A/imunologia , Ensaio de Imunoadsorção Enzimática , Microbiologia de Alimentos , Adjuvante de Freund , Dose Letal Mediana , Camundongos , Testes de Neutralização , Coelhos
13.
Philos Trans A Math Phys Eng Sci ; 367(1893): 1559-69, 2009 Apr 28.
Artigo em Inglês | MEDLINE | ID: mdl-19324723

RESUMO

The importance of biological materials has long been recognized from the molecular level to higher levels of organization. Whereas, in traditional engineering, hardness and stiffness are considered desirable properties in a material, biology makes considerable and advantageous use of softer, more pliable resources. The development, structure and mechanics of these materials are well documented and will not be covered here. The purpose of this paper is, however, to demonstrate the importance of such materials and, in particular, the functional structures they form. Using only a few simple building blocks, nature is able to develop a plethora of diverse materials, each with a very different set of mechanical properties and from which a seemingly impossibly large number of assorted structures are formed. There is little doubt that this is made possible by the fact that the majority of biological 'materials' or 'structures' are based on fibres and that these fibres provide opportunities for functional hierarchies. We show how these structures have inspired a new generation of innovative technologies in the science and engineering community. Particular attention is given to the use of insects as models for biomimetically inspired innovations.


Assuntos
Materiais Biomiméticos/química , Biomimética , Animais , Materiais Biocompatíveis , Biologia , Engenharia Biomédica/métodos , Desenho de Equipamento , Insetos , Masculino , Microscopia Eletrônica de Varredura , Nanotecnologia , Estresse Mecânico , Propriedades de Superfície
14.
Ann N Y Acad Sci ; 1134: 120-45, 2008.
Artigo em Inglês | MEDLINE | ID: mdl-18566092

RESUMO

Extraction of oil from the Alberta Oil Sands through surface mining involves the removal of the overburden and oil sand to a depth of up to 100 m and over extremely large areas. While the operation of the bitumen processing plants has serious environmental impacts on downstream habitats, this article focuses on the reclamation of areas from which the oil sands have been removed, processed, and returned. This reclamation following closure of the mines will entail the complete re-creation of landforms and ecosystems at a landscape scale, with the goal of producing suitable habitats for plants, animals, and people. Such projects will require a reasonable understanding of the geophysical and ecological processes that operate at a wide range of scales. Some information is provided on the climate, hydrology, vegetation, and land use (past and current) of the Oil Sands area, situated within the Boreal Plain ecozone, to provide a framework for discussion of issues to be addressed in, and proposed guidelines for, such large-scale reclamation. Although none of the mines has yet closed, numerous consultant reports have been produced with recommendations for various aspects of such reclamation projects (e.g., wetland hydrology, vegetation, wildlife habitat). The scientific basis of such reports is found to vary with respect to depth of understanding of the relevant processes.


Assuntos
Conservação dos Recursos Naturais/métodos , Ecossistema , Mineração/métodos , Petróleo , Alberta , Conservação dos Recursos Naturais/legislação & jurisprudência , Fenômenos Geológicos , Geologia , Mineração/legislação & jurisprudência
15.
Neurology ; 70(19 Pt 2): 1732-9, 2008 May 06.
Artigo em Inglês | MEDLINE | ID: mdl-18160675

RESUMO

BACKGROUND: Education may modulate the degree to which the neuropathology of Alzheimer disease (AD) is expressed as impaired cognitive performance. METHODS: We studied 2,051 participants age 65+ years at 27 AD Centers who died and underwent autopsy. All took the Mini-Mental State Examination (MMSE) within 2 years before death. Braak & Braak stage, neuritic plaque density, and Consortium to Establish a Registry for Alzheimer's Disease and National Institute on Aging (NIA)/Reagan diagnostic classifications quantified AD neuropathologic severity. Multivariate analyses modeled MMSE in relation to education and neuropathologic severity, adjusting for age at death, Lewy body pathology, and vascular dementia. RESULTS: Higher education was associated with higher MMSE scores when AD neuropathology was absent or mild. But with more advanced neuropathology, differences in MMSE scores among education levels were attenuated. For example, among patients without AD by NIA/Reagan criteria, fitted MMSE scores ranged from 19.6 for patients with less than high school education to 25.9 with education beyond high school. But among patients with neuropathologically advanced AD, the range of scores by education was only 7.1 to 8.6. CONCLUSIONS: We found no evidence of larger education-related differences in cognitive function when Alzheimer disease (AD) neuropathology was more advanced. Higher Mini-Mental State Examination scores among more educated persons with mild or no AD may reflect better test-taking skills or cognitive reserve, but these advantages may ultimately be overwhelmed by AD neuropathology.


Assuntos
Doença de Alzheimer/epidemiologia , Doença de Alzheimer/patologia , Encéfalo/patologia , Transtornos Cognitivos/epidemiologia , Transtornos Cognitivos/patologia , Escolaridade , Idoso , Idoso de 80 Anos ou mais , Doença de Alzheimer/prevenção & controle , Atrofia/epidemiologia , Atrofia/patologia , Atrofia/prevenção & controle , Autopsia , Encéfalo/fisiopatologia , Transtornos Cognitivos/prevenção & controle , Progressão da Doença , Meio Ambiente , Feminino , Humanos , Testes de Inteligência , Masculino , Plasticidade Neuronal/fisiologia , Testes Neuropsicológicos , Índice de Gravidade de Doença , Estatística como Assunto
16.
Philos Trans R Soc Lond B Biol Sci ; 363(1501): 2317-29, 2008 Jul 12.
Artigo em Inglês | MEDLINE | ID: mdl-18006414

RESUMO

The area burned in the North American boreal forest is controlled by the frequency of mid-tropospheric blocking highs that cause rapid fuel drying. Climate controls the area burned through changing the dynamics of large-scale teleconnection patterns (Pacific Decadal Oscillation/El Niño Southern Oscillation and Arctic Oscillation, PDO/ENSO and AO) that control the frequency of blocking highs over the continent at different time scales. Changes in these teleconnections may be caused by the current global warming. Thus, an increase in temperature alone need not be associated with an increase in area burned in the North American boreal forest. Since the end of the Little Ice Age, the climate has been unusually moist and variable: large fire years have occurred in unusual years, fire frequency has decreased and fire-climate relationships have occurred at interannual to decadal time scales. Prolonged and severe droughts were common in the past and were partly associated with changes in the PDO/ENSO system. Under these conditions, large fire years become common, fire frequency increases and fire-climate relationships occur at decadal to centennial time scales. A suggested return to the drier climate regimes of the past would imply major changes in the temporal dynamics of fire-climate relationships and in area burned, a reduction in the mean age of the forest, and changes in species composition of the North American boreal forest.


Assuntos
Clima , Incêndios , Modelos Teóricos , Árvores , América do Norte
18.
Ecology ; 88(6): 1582-6, 2007 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-17601149

RESUMO

To study forest dynamics without relying on the space-for-time substitution, one must be able to follow a population or stand of trees back or forward in time. The method of stand reconstruction looks back in time by aging all the live trees and aging and dating the time of death of dead standing and fallen trees. However, dead trees are lost by decomposition so the record becomes increasingly incomplete with passage of time. Here we present a model of the passage of trees from dead standing to dead decomposed but still datable to completely decomposed and thus undatable or lost. We then generalize a method for calculating the falling rate of dead trees originally proposed in 1985 by A. P. Gore, E. A. Johnson, and H. P. Lo. We do this by removing the assumption that no trees are lost by decomposition, i.e., by using the decomposition rate. Finally, in the most important result, the model allows estimation of how far back a good estimate of the numbers in the population can be made if the decomposition rates are known.


Assuntos
Biodegradação Ambiental , Filogenia , Árvores/classificação , Árvores/crescimento & desenvolvimento , Ecossistema , Dinâmica Populacional , Crescimento Demográfico , Comportamento Espacial , Especificidade da Espécie
19.
J Bacteriol ; 189(3): 818-32, 2007 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-17114256

RESUMO

Clostridium botulinum is a taxonomic designation for many diverse anaerobic spore-forming rod-shaped bacteria that have the common property of producing botulinum neurotoxins (BoNTs). The BoNTs are exoneurotoxins that can cause severe paralysis and death in humans and other animal species. A collection of 174 C. botulinum strains was examined by amplified fragment length polymorphism (AFLP) analysis and by sequencing of the 16S rRNA gene and BoNT genes to examine the genetic diversity within this species. This collection contained representatives of each of the seven different serotypes of botulinum neurotoxins (BoNT/A to BoNT/G). Analysis of the16S rRNA gene sequences confirmed previous identifications of at least four distinct genomic backgrounds (groups I to IV), each of which has independently acquired one or more BoNT genes through horizontal gene transfer. AFLP analysis provided higher resolution and could be used to further subdivide the four groups into subgroups. Sequencing of the BoNT genes from multiple strains of serotypes A, B, and E confirmed significant sequence variation within each serotype. Four distinct lineages within each of the BoNT A and B serotypes and five distinct lineages of serotype E strains were identified. The nucleotide sequences of the seven toxin genes of the serotypes were compared and showed various degrees of interrelatedness and recombination, as was previously noted for the nontoxic nonhemagglutinin gene, which is linked to the BoNT gene. These analyses contribute to the understanding of the evolution and phylogeny within this species and assist in the development of improved diagnostics and therapeutics for the treatment of botulism.


Assuntos
Toxinas Botulínicas/biossíntese , Clostridium botulinum/genética , Variação Genética , Clostridium botulinum/metabolismo , Dados de Sequência Molecular , Filogenia , RNA Ribossômico 16S/genética , Análise de Sequência de DNA , Sorotipagem
20.
Ecol Appl ; 16(5): 1757-70, 2006 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-17069369

RESUMO

This paper examines the commonly accepted assumption in the riparian literature that areas adjacent to streams do not burn. Using time-since-fire distributions, derived from stand-origin maps for a watershed in the front ranges of the Canadian Rocky Mountains, we found that the areas adjacent to streams and the whole study watershed have similar fire frequencies. In addition, the relative importance of fires and floods is regulated by a change in channel morphology associated with the creation of bars. The results demonstrate that fires solely control tree establishment along straight streams without bars, while the influence of floods is observed at the onset of lateral- and point-bar formation. This occurs because bars are formed in-channel and require smaller discharges in order to be flooded, compared to higher terraces. Consequently, bars are the only surfaces being flooded more frequently than they are being burned. Thus, overall the results indicate that, on this watershed, areas adjacent to streams are not less likely to burn than the uplands, except for lateral and point bars. The generality of these results to other systems should be tested as they have important implications for current forest ecological definition of "riparian zones," which typically include all fluvially derived landforms, from the channel banks to the terraces. Indeed, this study suggests that along smaller, headwater, gravel-bed mountain watersheds, the forests found on terraces are only influenced by fire and not fluvial processes and should therefore not be included in the riparian zone, while the forests on bars are the only surfaces currently being influenced by fluvial processes. Such a change in definition has implications for both ecologists and forest managers aiming to protect areas along streams as they now must take into account the effects of two disturbances on these small gravel-bed streams.


Assuntos
Desastres , Ecossistema , Incêndios , Rios , Árvores/fisiologia , Conservação dos Recursos Naturais , Fatores de Tempo
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