RESUMO
Approaches to rapidly collecting global biodiversity data are increasingly important, but biodiversity blind spots persist. We organized a three-day Datathon event to improve the openness of local biodiversity data and facilitate data reuse by local researchers. The first Datathon, organized among microbial ecologists in Uruguay and Argentina assembled the largest microbiome dataset in the region to date and formed collaborative consortia for microbiome data synthesis.
Assuntos
Biodiversidade , Ecologia , Microbiota , Argentina , UruguaiRESUMO
Background: Biodiversity is the assortment of life on earth covering evolutionary, ecological, biological, and social forms. To preserve life in all its variety and richness, it is imperative to monitor the current state of biodiversity and its change over time and to understand the forces driving it. This need has resulted in numerous works being published in this field. With this, a large amount of textual data (publications) and metadata (e.g. dataset description) has been generated. To support the management and analysis of these data, two techniques from computer science are of interest, namely Named Entity Recognition (NER) and Relation Extraction (RE). While the former enables better content discovery and understanding, the latter fosters the analysis by detecting connections between entities and, thus, allows us to draw conclusions and answer relevant domain-specific questions. To automatically predict entities and their relations, machine/deep learning techniques could be used. The training and evaluation of those techniques require labelled corpora. New information: In this paper, we present two gold-standard corpora for Named Entity Recognition (NER) and Relation Extraction (RE) generated from biodiversity datasets metadata and abstracts that can be used as evaluation benchmarks for the development of new computer-supported tools that require machine learning or deep learning techniques. These corpora are manually labelled and verified by biodiversity experts. In addition, we explain the detailed steps of constructing these datasets. Moreover, we demonstrate the underlying ontology for the classes and relations used to annotate such corpora.
RESUMO
Kin recognition is a key ability which facilitates the acquisition of inclusive fitness benefits and enables optimal outbreeding. In primates, phenotype matching is considered particularly important for the recognition of patrilineal relatives, as information on paternity is unlikely to be available via social familiarity. Phenotypic cues to both paternal and maternal relatedness exist in the facial features of humans and other primates. However, theoretical models suggest that in systems with uncertainty parentage it may be adaptive for offspring to conceal such cues when young, in order to avoid potential costs of being discriminated against by unrelated adults. Using experienced human raters, we demonstrate in a computer-based task that detection of parent-offspring resemblances in the faces of rhesus macaques (Macaca mulatta) increases significantly with offspring age. Moreover, this effect is specific to information about kinship, as raters were extremely successful at discriminating individuals even among the youngest animals. To our knowledge, this is the first evidence in non-humans for the age-dependent expression of visual cues used in kin recognition.
Assuntos
Face , Macaca mulatta/fisiologia , Fenótipo , Percepção Visual , Fatores Etários , Animais , Sinais (Psicologia) , Feminino , Humanos , MasculinoRESUMO
Kin recognition can enhance inclusive fitness via nepotism and optimal outbreeding. Mechanisms allowing recognition of patrilineal relatives are of particular interest in species in which females mate promiscuously, leading to paternity uncertainty. Humans are known to detect facial similarities between kin in the faces of third parties, and there is some evidence for continuity of this ability in nonhuman primates . However, no study has yet shown that this propensity translates into an ability to detect one's own relatives, one of the key prerequisites for gaining fitness benefits. Here we report a field experiment demonstrating that free-ranging rhesus macaques (Macaca mulatta) spontaneously discriminate between facial images of their paternal half-siblings and unrelated individuals, when both animals are unfamiliar to the tested individual. Specifically, subjects systematically biased their inspection time toward nonkin when the animals pictured were of their own sex (potential threats), relative to when they were of the opposite sex (potential mates). Our results provide strong evidence for visual phenotype matching and the first demonstration in any primate that individuals can spontaneously detect their own paternal relatives on the basis of facial cues under natural conditions.
Assuntos
Sinais (Psicologia) , Macaca mulatta/fisiologia , Reconhecimento Psicológico , Percepção Visual , Animais , Face/anatomia & histologia , Feminino , Macaca mulatta/psicologia , Masculino , IrmãosRESUMO
The ability to recognize kin and thus behaviourally discriminate between conspecifics based on genetic relatedness is of importance both in acquiring inclusive fitness benefits and to enable optimal inbreeding. In primates, mechanisms allowing recognition of paternal relatives are of particular interest, given that in these mating systems patrilineal information is unlikely to be available via social familiarity. Humans use visual phenotype matching based on facial features to identify their own and other's close relatives, and recent studies suggest similar abilities may be present in other species. However it is unclear to what extent familial resemblances remain detectable against the background levels of relatedness typically found within demes in the wild - a necessary condition if facial cues are to function in kin recognition under natural conditions. Here, we experimentally investigate whether parent-offspring relationships are discernible in rhesus macaque (Macaca mulatta) faces drawn from a large free-ranging population more representative of the latter scenario, and in which genetic relatedness has been well quantified from pedigrees determined via molecular markers. We used the human visual system as a means of integrating multiple types of facial cue simultaneously, and demonstrate that paternal, as well as maternal, resemblance to both sons and daughters can be detected even by human observers. Experts performed better than participants who lacked previous experience working with nonhuman primates. However the finding that even naïve individuals succeeded at the task underlines the strength of the phenotypic cues present in faces.
Assuntos
Face/fisiologia , Paternidade , Animais , Sinais (Psicologia) , Feminino , Humanos , Macaca mulatta , Masculino , FenótipoRESUMO
This introduction to the themed issue on Evolutionary and ecological approaches to the study of personality provides an overview of conceptual, theoretical and methodological progress in research on animal personalities over the last decade, and places the contributions to this volume in context. The issue has three main goals. First, we aimed to bring together theoreticians to contribute to the development of models providing adaptive explanations for animal personality that could guide empiricists, and stimulate exchange of ideas between the two groups of researchers. Second, we aimed to stimulate cross-fertilization between different scientific fields that study personality, namely behavioural ecology, psychology, genomics, quantitative genetics, neuroendocrinology and developmental biology. Third, we aimed to foster the application of an evolutionary framework to the study of personality.
Assuntos
Evolução Biológica , Fenômenos Ecológicos e Ambientais , Personalidade/genética , Animais , Comportamento Animal , Pesquisa Comportamental , Humanos , Modelos Genéticos , Modelos PsicológicosRESUMO
Recent studies in the field of behavioural ecology have revealed intriguing variation in behaviour within single populations. Increasing evidence suggests that individual animals differ in their average level of behaviour displayed across a range of contexts (animal 'personality'), and in their responsiveness to environmental variation (plasticity), and that these phenomena can be considered complementary aspects of the individual phenotype. How should this complex variation be studied? Here, we outline how central ideas in behavioural ecology and quantitative genetics can be combined within a single framework based on the concept of 'behavioural reaction norms'. This integrative approach facilitates analysis of phenomena usually studied separately in terms of personality and plasticity, thereby enhancing understanding of their adaptive nature.
Assuntos
Comportamento Animal , Invertebrados/fisiologia , Personalidade , Vertebrados/fisiologia , Animais , Ecossistema , Modelos Biológicos , Estresse FisiológicoRESUMO
Indirect fitness benefits from kin selection can explain why non-breeding individuals help raise the young of relatives. However, the evolution of helping by non-relatives requires direct fitness benefits, for example via group augmentation. Here, we examine nest visit rates, load sizes and prey types delivered by breeding pairs and their helpers in the cooperatively breeding bell miner (Manorina melanophrys). In this system, males remain in their natal colony while young females typically disperse, and helpers of both sexes often assist at multiple nests concurrently. We found extremely clear evidence for the expected effect of genetic relatedness on individual helping effort per nest within colonies. This positive incremental effect of kinship was facultative-i.e. largely the result of within-individual variation in helping effort. Surprisingly, no sex differences were detectable in any aspect of helping, and even non-relatives provided substantial aid. Helpers and breeders of both sexes regulated their provisioning effort by responding visit-by-visit to changes in nestling begging. Helping behaviour in bell miners therefore appears consistent with adaptive cooperative investment in the brood, and kin-selected care by relatives. Similar investment by 'unrelated' helpers of both sexes argues against direct fitness benefits, but is perhaps explained by kin selection at the colony level.
Assuntos
Cruzamento , Comportamento Cooperativo , Comportamento de Ajuda , Comportamento de Nidação/fisiologia , Passeriformes/fisiologia , Animais , Comportamento Animal , Feminino , MasculinoRESUMO
Animals often differ in suites of correlated behaviours, comparable with how humans differ in personality. Constraints on the architecture of behaviour have been invoked to explain why such 'behavioural syndromes' exist. From an adaptationist viewpoint, however, behavioural syndromes should evolve only in those populations where natural selection has favoured such trait covariance, and they should therefore exist only in particular types of population. A comparative approach was used to examine this prediction of the adaptive hypothesis. We measured behavioural correlations in 12 different populations of three-spined stickleback (Gasterosteus aculeatus) and assessed whether they indeed varied consistently according to the selective environment, where population was unit of analysis. For a sample of fry from each population, we measured five different behaviours within the categories of (i) aggression (towards conspecifics); (ii) general activity; and (iii) exploration-avoidance (of novel foods, novel environments and altered environments). We show that behavioural syndromes are not always the same in different types of stickleback population: the often-documented syndrome between aggressiveness, activity and exploratory behaviour existed only in large ponds where piscivorous predators were present. In small ponds where predators were absent, these behaviours were not (or only weakly) associated. Our findings imply that population variation in behavioural syndromes does not result from stochastic evolutionary processes, but may result instead from adaptive evolution of behaviour favouring what should prove to be optimal trait combinations.