Genome-wide association study for body weight and feed consumption traits in Japanese quail using Bayesian approaches.

The aim of this study was to perform a genome-wide association study (GWAS) based on Bayes A and Bayes B statistical methods to identify genomic loci and candidate genes associated with body weight gain, feed intake, and feed conversion ratio in Japanese quail. For this purpose, genomic data obtained from Illumina iSelect 4K quail SNP chip were utilized. After implementing various quality control steps, genotype data from a total of 875 birds for 2,015 SNP markers were used for subsequent analyses. The Bayesian analyses were performed using hibayes package in R (version 4.3.1) and Gibbs sampling algorithm. The results of the analyses showed that Bayes A accounted for 11.43, 11.65, and 11.39% of the phenotypic variance for body weight gain, feed intake, and feed conversion ratio, respectively, while the variance explained by Bayes B was 7.02, 8.61, and 6.48%, respectively. Therefore, in the current study, results obtained from Bayes A were used for further analyses. In order to perform the gene enrichment analysis and to identify the functional pathways and classes of genes that are over-represented in a large set of genes associated with each trait, all markers that accounted for more than 0.1% of the phenotypic variance for each trait were used. The results of this analysis revealed a total of 23, 38, and 14 SNP markers associated with body weight gain, feed intake, and feed conversion ratio in Japanese quail, respectively. The results of the gene enrichment analysis led to the identification of biological pathways (and candidate genes) related to lipid phosphorylation (TTC7A gene) and cell junction (FGFR4 and FLRT2 genes) associated with body weight gain, calcium signaling pathway (ADCY2 and CAMK1D genes) associated with feed intake, and glycerolipid metabolic process (LIPC gene), lipid metabolic process (ADGRF5 and ESR1 genes), and glutathione transferase (GSTK1 gene) associated with feed conversion ratio. Overall, the findings of this study can provide valuable insights into the genetic architecture of growth and feed consumption traits in Japanese quail.

Effects of low eggshell temperatures during incubation, in ovo feeding of L-arginine, and post-hatch dietary guanidinoacetic acid on hatching traits, performance, and physiological responses of broilers reared at low ambient temperature.

This study aimed to investigate the effect of eggshell temperature (ET) manipulations during incubation, in ovo feeding (IOF) of arginine, and post-hatch dietary supplementation with guanidinoacetic acid (GAA) on hatching traits and subsequent growth and physiological performance of hatched broiler chicks reared under subnormal temperature. In experiment 1, from d 8 of incubation onward, a total of 2,160 hatching eggs were randomly arranged in a 2 × 3 factorial design, in which the eggs were exposed to 2 ET (37.8°C or periodically low ET), and 3 IOF treatments (noninjected, diluent-injected, and 1% arginine solution-injected). In experiment 2, a total of 576 one-day-old male broiler chicks from 2 temperature conditions and 2 IOF treatment groups (noninjected and Arg-injected) were reared for 42 d with or without GAA supplementation in a 2 × 2 × 2 factorial design. Each treatment had 6 replicates with 12 birds each. A subnormal ambient temperature (17°C) was applied from 15 d onward to induce ascites. Results from experiment 1 showed a 2-way interaction between ET and IOF for embryonic mortality rate during 19 to 21 d of incubation and residual yolk weight at hatch (P < 0.05). A periodically low ET significantly increased yolk free body mass, first-grade chicks, and relative heart weight than an ET of 37.8°C. In the second experiment, overall average daily gain (ADG) was increased, but feed conversion ratio (FCR), ascites mortality, and serum thyroid hormones and corticosterone were reduced in the low ET group (P < 0.05). There were also IOF × GAA interactions for ADG and FCR (P < 0.05). IOF of arginine or dietary GAA increased serum nitric oxide concentration and jejunal villus height, but decreased ascites mortality (P < 0.05). In conclusion, a periodically low ET accompanied by IOF of arginine during incubation and posthatch dietary supplementation with GAA could be a useful strategy for improving the chick quality at hatch and subsequent improvements in post-hatch performance and ascites indices in cold-stressed broilers.

Effects of multicarbohydrase and butyrate glycerides on productive performance, nutrient digestibility, gut morphology, and ileal microbiota in late-phase laying hens fed corn- or wheat-based diets.

A study was undertaken to determine the effects of supplemental multicarbohydrase (MC) and butyrate glycerides (BG) on productive performance, nutritional, and physiological responses in laying hens fed corn- or wheat-based diets during a 12-week production period (from 50-62 wk of age). The experiment consisted of a 2 × 2 × 2 factorial arrangement of the treatments with 2 different basal diets (corn- or wheat-based diets), 2 concentrations of MC (0 or 200 mg/kg of diet), and 2 concentrations of BG (0 or 2 g/kg of diet). Each treatment had 6 replicates with 8 hens each. The interactions among diet, MC, and BG were observed for egg production (P = 0.048), feed conversion ratio (P = 0.005), and ileal Escherichia coli count (P = 0.043), indicating that the effects of MC and BG on these responses were more marked when wheat-based diet was fed. A diet × MC interaction (P < 0.05) was also detected for egg mass, eggshell breaking strength, jejunal viscosity, and digestibility coefficients of fat and ash. Replacing 100% of the corn with wheat in the diets of laying hens negatively affected (P < 0.05) yolk color index, eggshell thickness, digesta viscosity, jejunal morphology, and populations of ileal microbiota. By contrast, MC supplementation increased (P < 0.05) eggshell thickness, digestibility coefficients of energy and crude protein, and populations of Lactobacillus and Bifidobacterium spp. in the ileum. Inclusion of BG also resulted in greater (P < 0.05) jejunal villus height and villus surface area, and digestibility coefficients of protein and ash, but lower (P < 0.05) populations of total bacteria, Salmonella and E. coli in the ileum. Results indicate that while the complete substitution of corn by wheat has a detrimental effect on productive performance and gut health, the combination of MC and BG may have synergistic effects on improving productive performance and intestinal microbiota in laying hens fed the wheat-based diets during the late laying period.

Effect of increasing dosage of a multi-mineral-vitamin supplement on productive performance and blood minerals of fattening male Ghezel × Afshar lambs.

This study was conducted to evaluate the effects of supplementation with different levels of mineral-vitamin supplement (MVS) on performance and health of fattening lambs. Thirty-nine fattening male Ghezel× Afshar lambs (averaging body weight 31.02 ± 3.46 kg) were used in a completely randomized design for a period of 84 days. Treatments consisted of 0 (CON), 15 (MVS15), or 30 (MVS30) g/day of MVS mixed into the concentrate. The results showed that inclusion of MVS in the ration linearly enhanced body weight (BW) on day 29 (P < 0.002), 45 (P = 0.05), and 70 (P < 0.002). Dry matter intake (DMI) was increased linearly (P < 0.02) and quadratically (P < 0.001) with increasing supplement between days 58 and 70. Overall DMI tended (P = 0.1) to be greater for the MVS 30 treatment. Total average daily gain (ADG), ADG between days 16 and 29, days 58 and 70, total gain: feed ratio, gain: feed ratio between days 16-29 and days 58-70 linearly increased with increasing amount of MVS in the ration (P < 0.01). The days with loose fecal scores were not affected by treatments (P > 0.05). There was a linear and quadratic (P < 0.01) effect on serum Ca concentration. Phosphorus concentration tended to quadratically increase (P = 0.06) with MVS. Blood serum Zn increased linearly (P = 0.01) with increasing level of MVS. Collectively, the results showed that, under the conditions of the current experiment, MVS addition to ration improved performance of fattening lambs.

The effect of feeding rations with different ratios of concentrate to alfalfa hay on blood hematological and biochemical parameters of farmed ostriches (Struthio camelus).

A two-month trial was conducted to investigate the effects of pelleting rations with 70:30, 65:35, and 60:40 concentrate to high-quality roughage (alfalfa hay) ratios on hematological and biochemical parameters of ostriches. A total of 18 seven-month-old male ostrich chicks, initially weighing an average of 60-70 kg, were distributed into three different outdoor paddocks at a stocking density of six birds per paddock. In the morning, blood collection was made from the wing vein after about 12 h of fasting. All rations resulted in no significant change in hematological parameters. However, with increasing alfalfa inclusion rate, the heterophil/lymphocyte ratio tended to be lower (P = 0.089); whereas the values of hemoglobin, packed cell volume (PCV), and mean corpuscular hemoglobin (MCH) tended to be higher (P values 0.069, 0.072 and 0.094, respectively). In terms of plasma biochemical parameters, increasing the ratio of concentrate to alfalfa hay in ostrich diets resulted in significant (P < 0.05) depression in the values of glucose (up to 20.2 %), total cholesterol (up to 19.2 %), creatine kinase (up to 27.9 %), and aspartate aminotransferase (up to 29.9 %). Additionally, the 65:35 or 60:40 rations caused a decrease in low-density lipoprotein cholesterol level (27.9 and 42 %, respectively; P = 0.008) compared to the 70:40 ration. Without exception, no rations affected the values of leukocyte subsets, total protein, albumin, globulin, uric acid, alanine aminotransferase, gamma glutamyl transferase, triglycerides, high-density lipoprotein cholesterol, and very low density lipoprotein. Based on our results, the concentrate to alfalfa ratio of 60:40 could be suggested as optimum ratio for good health conditions of juvenile ostriches.