Contrasting sap flow characteristics between pioneer and late-successional tree species in secondary tropical montane forests of Eastern Himalaya, India.

The interactive role of life-history traits and environmental factors on plant water relations is crucial for understanding the responses of species to climate change, but it remains poorly understood in secondary tropical montane forests (TMFs). In this study, we examined differences in sap flow between the pioneer species Symplocos racemosa and Eurya acuminata, and the late-successional species Castanopsis hystrix that co-occur in a biodiverse Eastern Himalayan secondary broadleaved TMF. The fast-growing pioneers had sap flux densities that were 1.6-2.1 times higher than the late-successional species, and exhibited characteristics of long-lived pioneer species. Significant radial and azimuthal variability in sap flow (V) between species was observed and could be attributed to the life-history trait and the access of the canopy to sunlight. Nocturnal V was 13.8% of the daily total and was attributable to stem recharge during the evening period (18.00-23.00 h) and to endogenous stomatal controls during the pre-dawn period (00.00-05.00 h). The shallow-rooted pioneer species both exhibited midday depression in V that was attributable to photosensitivity and diel moisture stress responses. In contrast, the deep-rooted late-successional species showed unaffected transpiration across the dry season, indicating their access to groundwater. Thus, our results suggest that secondary broadleaved TMFs, with a dominance of shallow-rooted pioneers, are more prone to the negative impacts of drier and warmer winters than primary forests, which are dominated by deep-rooted species. Our study provides an empirical understanding of how life-history traits coupled with microclimate can modulate plant water use in the widely distributed secondary TMFs in Eastern Himalaya, and highlights their vulnerability to warmer winters and reduced winter precipitation due to climate change.

Gamma diversity and under-sampling together generate patterns in beta-diversity.

Beta diversity represents how species in the regional pool segregate among local communities and hence forms a link between local and regional species diversities. Therefore, the magnitude of beta diversity and its variation across geographic gradients can provide insights into mechanisms of community assembly. Along with limits on local or regional level diversities, effects of local abundance that lead to under-sampling of the regional species pool are important determinants of estimated beta diversity. We explore the effects of regional species pools, abundance distributions, and local abundance to show that patterns in beta diversity as well as the mean of species abundance distribution have distinct outcomes, depending on limits on species pools and under-sampling. We highlight the effect of under-sampling in some established relationships between gamma diversity and beta diversity using graphical methods. We then use empirical data on ant communities across an elevational gradient in the Eastern Himalayas to demonstrate a shift from effect of reduction in species pool to under-sampling at mid-elevations. Our results show that multiple processes with contrasting effects simultaneously affect patterns in beta diversity across geographic gradients.

Monitoring microbial growth on a microfluidic lab-on-chip with electrochemical impedance spectroscopic technique.

A continuous rise in the wastes from industrial effluents, bio-waste, and pharmaceuticals has deteriorated surface water and drinking water sources. Standard laboratory tests of total coliform are time-consuming and logistically inefficient for field data generation. Better and portable sensing technologies are needed. This paper reports an electrical impedance spectroscopic technique incorporated in a micro-fluidic chip with interdigitated microelectrodes to monitor the growth of microbial cells. Lag, log, and stationary phases of Escherichia coli cell growth with an integrated electrode are successfully detected, for samples of reverse osmosis water, standard treated tap water, and recycled water respectively. The results indicate that reverse osmosis water has a higher probability of contamination with bacterial pathogens compared to the other two types of water samples when subjected to the same amount of added nutrients. The statistical analysis shows a possible single detection range with higher-order regression, and repeat use of a single chip with the electrode was found to be within an acceptable limit. The interdigitated electrodes exposed to in-situ cell growth conditions and repeated electrical measurements have shown a promise for possible periodic or continuous monitoring. The paper further identifies several complimentary analysis methodologies that are robust towards phase noise in the measured impedance and are suited particularly for early-stage detection of bacterial contamination. The cell adhesion tendencies over the microelectrode due to the electric field need to be further analyzed.

Biological cells and coupled electro-mechanical effects: The role of organelles, microtubules, and nonlocal contributions.

Biological cells are exposed to a variety of mechanical loads throughout their life cycles that eventually play an important role in a wide range of cellular processes. The understanding of cell mechanics under the application of external stimuli is important for capturing the nuances of physiological and pathological events. Such critical knowledge will play an increasingly vital role in modern medical therapies such as tissue engineering and regenerative medicine, as well as in the development of new remedial treatments. At present, it is well known that the biological molecules exhibit piezoelectric properties that are of great interest for medical applications ranging from sensing to surgery. In the current study, a coupled electro-mechanical model of a biological cell has been developed to better understand the complex behaviour of biological cells subjected to piezoelectric and flexoelectric properties of their constituent organelles under the application of external forces. Importantly, a more accurate modelling paradigm has been presented to capture the nonlocal flexoelectric effect in addition to the linear piezoelectric effect based on the finite element method. Major cellular organelles considered in the developed computational model of the biological cell are the nucleus, mitochondria, microtubules, cell membrane and cytoplasm. The effects of variations in the applied forces on the intrinsic piezoelectric and flexoelectric contributions to the electro-elastic response have been systematically investigated along with accounting for the variation in the coupling coefficients. In addition, the effect of mechanical degradation of the cytoskeleton on the electro-elastic response has also been quantified. The present studies suggest that flexoelectricity could be a dominant electro-elastic coupling phenomenon, exhibiting electric fields that are four orders of magnitude higher than those generated by piezoelectric effects alone. Further, the output of the coupled electro-mechanical model is significantly dependent on the variation of flexoelectric coefficients. We have found that the mechanical degradation of the cytoskeleton results in the enhancement of both the piezo and flexoelectric responses associated with electro-mechanical coupling. In general, our study provides a framework for more accurate quantification of the mechanical/electrical transduction within the biological cells that can be critical for capturing the complex mechanisms at cellular length scales.

The impact of leopards (Panthera pardus) on livestock losses and human injuries in a human-use landscape in Maharashtra, India.

There are many ways in which large carnivores and humans interact in shared spaces. In this study we provide insights into human-leopard relationships in an entirely modified, human-dominated landscape inhabited by dense populations of humans (266 per km2), their livestock (162 per km2) and relatively high densities of large predators (10 per 100 km2). No human deaths were recorded, and livestock losses to leopards numbered only 0.45 per km2per year (averaged over three years) despite the almost complete dependency of leopards on domestic animals as prey. Predation was not the major cause of livestock mortality as diseases and natural causes caused higher losses (80% of self-reported losses). We also found that ineffective night time livestock protection and the presence of domestic dogs increased the probability of a farmer facing leopard attacks on livestock. Resident farmers faced much lower livestock losses to leopard predation in contrast to the migratory shepherds who reported much higher losses, but rarely availed of the government compensation schemes. We recommend that local wildlife managers continue to shift from reactive measures such as leopard captures after livestock attacks to proactive measures such as focusing on effective livestock protection and informing the affected communities about safety measures to be taken where leopards occur in rural landscapes. The natural causes of livestock deaths due do diseases may be better prevented by involving animal husbandry department for timely vaccinations and treatment.

Spatial and climatic variables independently drive elevational gradients in ant species richness in the Eastern Himalaya.

Elevational gradients are considered important for understanding causes behind gradients in species richness due to the large variation in climate and habitat within a small spatial extent. Geometric constraints are thought to interact with environmental variables and influence elevational patterns in species richness. However, the geographic setting of most mountain ranges, particularly continuity with low elevation areas may reduce the effect of geometric constraints at lower elevations. In the present study, we test the effects of climatic gradients and continuity with the low elevation plains of the eastern Himalayan mountain range on patterns of species richness. We studied species richness of ants (Hymenoptera: Formicidae) on an elevational gradient between 600m and 2400m in the Eastern Himalaya-part of Himalaya biodiversity hotspot. Ants were sampled in nine elevational bands of 200m with four transects in each band using pitfall and Winkler traps. We used regression models to identify the most important environmental variables that predict species richness and used constrained null models to test the effects of contiguity between the mountain range and plains. We find a monotonic decline in species richness of ants with elevation. Temperature was a more important predictor of species richness than habitat complexity. Geometric constraints model weighted by temperature with a soft lower boundary and hard upper boundary best explained the species richness pattern. This suggests that a combination of climate and geometric constraints drive the elevational species richness patterns of ants.

Interacting effects of vessel noise and shallow river depth elevate metabolic stress in Ganges river dolphins.

In riverine 'soundscapes', complex interactions between sound, substrate type, and depth create difficulties in assessing impacts of anthropogenic noise pollution on freshwater fauna. Underwater noise from vessels can negatively affect endangered Ganges river dolphins (Platanista gangetica), which are 'almost blind' and rely entirely on high-frequency echolocation clicks to sense their environment. We conducted field-based acoustic recordings and modelling to assess acoustic responses of Platanista to underwater noise exposure from vessels in the Ganga River (India), which is now being transformed into a major waterway. Dolphins showed enhanced activity during acute noise exposure and suppressed activity during chronic exposure. Increase in ambient noise levels altered dolphin acoustic responses, strongly masked echolocation clicks, and more than doubled metabolic stress. Noise impacts were further aggravated during dry-season river depth reduction. Maintaining ecological flows, downscaling of vessel traffic, and propeller modifications to reduce cavitation noise, could help mitigate noise impacts on Ganges river dolphins.

Consistent response of vegetation dynamics to recent climate change in tropical mountain regions.

Global climate change has emerged as a major driver of ecosystem change. Here, we present evidence for globally consistent responses in vegetation dynamics to recent climate change in the world's mountain ecosystems located in the pan-tropical belt (30°N-30°S). We analyzed decadal-scale trends and seasonal cycles of vegetation greenness using monthly time series of satellite greenness (Normalized Difference Vegetation Index) and climate data for the period 1982-2006 for 47 mountain protected areas in five biodiversity hotspots. The time series of annual maximum NDVI for each of five continental regions shows mild greening trends followed by reversal to stronger browning trends around the mid-1990s. During the same period we found increasing trends in temperature but only marginal change in precipitation. The amplitude of the annual greenness cycle increased with time, and was strongly associated with the observed increase in temperature amplitude. We applied dynamic models with time-dependent regression parameters to study the time evolution of NDVI-climate relationships. We found that the relationship between vegetation greenness and temperature weakened over time or was negative. Such loss of positive temperature sensitivity has been documented in other regions as a response to temperature-induced moisture stress. We also used dynamic models to extract the trends in vegetation greenness that remain after accounting for the effects of temperature and precipitation. We found residual browning and greening trends in all regions, which indicate that factors other than temperature and precipitation also influence vegetation dynamics. Browning rates became progressively weaker with increase in elevation as indicated by quantile regression models. Tropical mountain vegetation is considered sensitive to climatic changes, so these consistent vegetation responses across widespread regions indicate persistent global-scale effects of climate warming and associated moisture stresses.

Big cats in our backyards: persistence of large carnivores in a human dominated landscape in India.

Protected areas are extremely important for the long term viability of biodiversity in a densely populated country like India where land is a scarce resource. However, protected areas cover only 5% of the land area in India and in the case of large carnivores that range widely, human use landscapes will function as important habitats required for gene flow to occur between protected areas. In this study, we used photographic capture recapture analysis to assess the density of large carnivores in a human-dominated agricultural landscape with density >300 people/km(2) in western Maharashtra, India. We found evidence of a wide suite of wild carnivores inhabiting a cropland landscape devoid of wilderness and wild herbivore prey. Furthermore, the large carnivores; leopard (Panthera pardus) and striped hyaena (Hyaena hyaena) occurred at relatively high density of 4.8±1.2 (sd) adults/100 km(2) and 5.03±1.3 (sd) adults/100 km(2) respectively. This situation has never been reported before where 10 large carnivores/100 km(2) are sharing space with dense human populations in a completely modified landscape. Human attacks by leopards were rare despite a potentially volatile situation considering that the leopard has been involved in serious conflict, including human deaths in adjoining areas. The results of our work push the frontiers of our understanding of the adaptability of both, humans and wildlife to each other's presence. The results also highlight the urgent need to shift from a PA centric to a landscape level conservation approach, where issues are more complex, and the potential for conflict is also very high. It also highlights the need for a serious rethink of conservation policy, law and practice where the current management focus is restricted to wildlife inside Protected Areas.

Averting biodiversity collapse in tropical forest protected areas.

The rapid disruption of tropical forests probably imperils global biodiversity more than any other contemporary phenomenon. With deforestation advancing quickly, protected areas are increasingly becoming final refuges for threatened species and natural ecosystem processes. However, many protected areas in the tropics are themselves vulnerable to human encroachment and other environmental stresses. As pressures mount, it is vital to know whether existing reserves can sustain their biodiversity. A critical constraint in addressing this question has been that data describing a broad array of biodiversity groups have been unavailable for a sufficiently large and representative sample of reserves. Here we present a uniquely comprehensive data set on changes over the past 20 to 30 years in 31 functional groups of species and 21 potential drivers of environmental change, for 60 protected areas stratified across the world's major tropical regions. Our analysis reveals great variation in reserve 'health': about half of all reserves have been effective or performed passably, but the rest are experiencing an erosion of biodiversity that is often alarmingly widespread taxonomically and functionally. Habitat disruption, hunting and forest-product exploitation were the strongest predictors of declining reserve health. Crucially, environmental changes immediately outside reserves seemed nearly as important as those inside in determining their ecological fate, with changes inside reserves strongly mirroring those occurring around them. These findings suggest that tropical protected areas are often intimately linked ecologically to their surrounding habitats, and that a failure to stem broad-scale loss and degradation of such habitats could sharply increase the likelihood of serious biodiversity declines.

Coexistence of fisheries with river dolphin conservation.

Freshwater biodiversity conservation is generally perceived to conflict with human use and extraction (e.g., fisheries). Overexploited fisheries upset the balance between local economic needs and endangered species' conservation. We investigated resource competition between fisheries and Ganges river dolphins (Platanista gangetica gangetica) in a human-dominated river system in India to assess the potential for their coexistence. We surveyed a 65-km stretch of the lower Ganga River to assess habitat use by dolphins (encounter rates) and fishing activity (habitat preferences of fishers, intensity of net and boat use). Dolphin abundance in the main channel increased from 179 (SE 7) (mid dry season) to 270 (SE 8) (peak dry season), probably as a result of immigration from upstream tributaries. Dolphins preferred river channels with muddy, rocky substrates, and deep midchannel waters. These areas overlapped considerably with fishing areas. Sites with 2-6 boats/km (moderately fished) were more preferred by dolphins than sites with 8-55 boats/km (heavily fished). Estimated spatial (85%) and prey-resource overlap (75%) between fisheries and dolphins (chiefly predators of small fish) suggests a high level of competition between the two groups. A decrease in abundance of larger fish, indicated by the fact that small fish comprised 74% of the total caught, may have intensified the present competition. Dolphins seem resilient to changes in fish community structure and may persist in overfished rivers. Regulated fishing in dolphin hotspots and maintenance of adequate dry season flows can sustain dolphins in tributaries and reduce competition in the main river. Fish-stock restoration and management, effective monitoring, curbing destructive fishing practices, secure tenure rights, and provision of alternative livelihoods for fishers may help reconcile conservation and local needs in overexploited river systems.

Proximity to forests drives bird conservation value of coffee plantations: implications for certification.

Widespread loss of primary habitat in the tropics has led to increased interest in production landscapes for biodiversity conservation. In the Western Ghats biodiversity hotspot in India, shade coffee plantations are located in close proximity to sites of high conservation value: protected and unprotected forests. Coffee is grown here under a tree canopy that may be dominated by native tree species or by nonnative species, particularly silver oak (Grevillea robusta). We investigated the influence of properties at the local scale and the landscape scale in determining bird communities in coffee plantations, with particular emphasis on species of conservation priority. We used systematic point counts in 11 coffee plantation sites and analyzed data in a randomized linear modeling framework that addressed spatial autocorrelation. Greater proportion of silver oak at the local scale and distance to contiguous forests at the landscape scale were implicated as factors most strongly driving declines in bird species richness and abundance, while increased basal area of native tree species, a local-scale variable, was frequently related to increased bird species richness and abundance. The influence of local-scale variables increased at greater distances from the forest. Distance to forests emerged as the strongest predictor of declines in restricted-range species, with 92% reduction in the abundance of two commonly encountered restricted-range species (Pompadour Green Pigeon and Yellow-browed Bulbul) and a 43% reduction in richness of bird species restricted to Indian hill forests within 8 km of forests. Increase in proportion of silver oak from 33% to 55% was associated with 91% reduction in the abundance of one commonly encountered restricted-range species (Crimson-fronted Barbet). One conservation strategy is providing incentives to grow coffee in a biodiversity-friendly manner. One implication of our study is that plantations located at varying distances to the forest cannot be compared fairly for biodiversity friendliness by existing certification methodology. Another is that conservation of existing forests at the landscape scale is essential for maintaining higher biodiversity in coffee plantations. Incentive schemes that promote conservation of remnant forests at the landscape scale and biodiversity-friendly practices locally and that relate to coffee communities as a whole rather than individual planters are likely to be more effective.