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1.
Phys Chem Chem Phys ; 2024 May 17.
Artigo em Inglês | MEDLINE | ID: mdl-38757604

RESUMO

Iminosilylene (HNSi) has been observed in the laboratory and is expected to occur in the envelopes of carbon-rich stars. However, the lack of spectroscopic information for HNSi has hampered its further astrophysical detection. Using robust ab initio methods, we present the first and comprehensive molecular line list for HNSi (X 1Σ+). The new line list contains almost 3.36 billion transitions between 1.57 million levels with rotational excitation up to J = 160. It is suitable for temperatures up to 3000 K and covers the wavenumber range of 0-9000 cm-1 (wavelengths λ > 1.11 µm). This new line list can be helpful for the future spectroscopic characterization and molecular detection of HNSi in the laboratory and interstellar space.

2.
Phys Chem Chem Phys ; 26(16): 12838-12843, 2024 Apr 24.
Artigo em Inglês | MEDLINE | ID: mdl-38623625

RESUMO

Hydroboron monoxide (HBO) is expected to occur in envelopes of the asymptotic giant branch (AGB), but a lack of spectroscopic data is hampering its possible detection. Using the state-of-the-art ab initio method, we present the first, comprehensive molecular line list for HBO which is suitable for temperatures up to T = 3000 K. This new line list covers the wavenumber range of 0-9000 cm-1 (wavelengths of λ ≥ 1.11 µm), and it contains almost 75 million transitions between 435 631 energy levels with rotational excitation up to J = 120. The new line list of HBO can facilitate its future molecular detection in the laboratory and interstellar space.

3.
Neural Netw ; 175: 106315, 2024 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-38626618

RESUMO

Pre-trained Language Model (PLM) is nowadays the mainstay of Unsupervised Sentence Representation Learning (USRL). However, PLMs are sensitive to the frequency information of words from their pre-training corpora, resulting in anisotropic embedding space, where the embeddings of high-frequency words are clustered but those of low-frequency words disperse sparsely. This anisotropic phenomenon results in two problems of similarity bias and information bias, lowering the quality of sentence embeddings. To solve the problems, we fine-tune PLMs by leveraging the frequency information of words and propose a novel USRL framework, namely Sentence Representation Learning with Frequency-induced Adversarial tuning and Incomplete sentence filtering (Slt-fai). We calculate the word frequencies over the pre-training corpora of PLMs and assign words thresholding frequency labels. With them, (1) we incorporate a similarity discriminator used to distinguish the embeddings of high-frequency and low-frequency words, and adversarially tune the PLM with it, enabling to achieve uniformly frequency-invariant embedding space; and (2) we propose a novel incomplete sentence detection task, where we incorporate an information discriminator to distinguish the embeddings of original sentences and incomplete sentences by randomly masking several low-frequency words, enabling to emphasize the more informative low-frequency words. Our Slt-fai is a flexible and plug-and-play framework, and it can be integrated with existing USRL techniques. We evaluate Slt-fai with various backbones on benchmark datasets. Empirical results indicate that Slt-fai can be superior to the existing USRL baselines.


Assuntos
Idioma , Aprendizado de Máquina não Supervisionado , Humanos , Redes Neurais de Computação , Processamento de Linguagem Natural , Algoritmos
4.
ChemSusChem ; : e202400551, 2024 Apr 15.
Artigo em Inglês | MEDLINE | ID: mdl-38618906

RESUMO

Over the past decades, CO2 greenhouse emission has been considerably increased, causing global warming and climate change. Indeed, converting CO2 into valuable chemicals and fuels is a desired option to resolve issues caused by its continuous emission into the atmosphere. Nevertheless, CO2 conversion has been hampered by the ultrahigh dissociation energy of C=O bonds, which makes it thermodynamically and kinetically challenging. From this prospect, photocatalytic approaches appear promising for CO2 reduction in terms of their efficiency compared to other traditional technologies. Thus, many efforts have been made in the designing of photocatalysts with asymmetric sites and oxygen vacancies, which can break the charge distribution balance of CO2 molecule, reduce hydrogenation energy barrier and accelerate CO2 conversion into chemicals and fuels. Here, we review the recent advances in CO2 hydrogenation to C1 and C2 products utilizing photocatalysis processes. We also pin down the key factors or parameters influencing the generation of C2 products during CO2 hydrogenation. In addition, the current status of CO2 reduction is summarized, projecting the future direction for CO2 conversion by photocatalysis processes.

5.
Animals (Basel) ; 13(23)2023 Dec 01.
Artigo em Inglês | MEDLINE | ID: mdl-38067072

RESUMO

Broiler weighing is essential in the broiler farming industry. Camera-based systems can economically weigh various broiler types without expensive platforms. However, existing computer vision methods for weight estimation are less mature, as they focus on young broilers. In effect, the estimation error increases with the age of the broiler. To tackle this, this paper presents a novel framework. First, it employs Mask R-CNN for instance segmentation of depth images captured by 3D cameras. Next, once the images of either a single broiler or multiple broilers are segmented, the extended artificial features and the learned features extracted by Customized Resnet50 (C-Resnet50) are fused by a feature fusion module. Finally, the fused features are adopted to estimate the body weight of each broiler employing gradient boosting decision tree (GBDT). By integrating diverse features with GBTD, the proposed framework can effectively obtain the broiler instance among many depth images of multiple broilers in the visual field despite the complex background. Experimental results show that this framework significantly boosts accuracy and robustness. With an MAE of 0.093 kg and an R2 of 0.707 in a test set of 240 63-day-old bantam chicken images, it outperforms other methods.

6.
Neural Netw ; 168: 652-664, 2023 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-37847949

RESUMO

Graph Convolutional Networks (GCNs) can be acknowledged as one of the most significant methodologies for graph representation learning, and the family of GCNs has recently achieved great success in the community. However, in real-world scenarios, the graph data may be imperfect, e.g., with noisy and sparse features or labels, which poses a great challenge to the robustness of GCNs. To meet this challenge, we propose a simple-yet-effective LAbel-ENhanced Networks (LaenNet) architecture for GCNs, where the basic spirit is to propagate labels together with features. Specifically, we add an extra LaenNet module at one hidden layer of GCNs, which propagates labels along the graph and then integrates them with the hidden representations as the inputs to the deeper layer. The proposed LaenNet can be directly generalized to the variants of GCNs. We conduct extensive experiments to verify LaenNet on semi-supervised node classification tasks under four noisy and sparse graph data scenarios, including the graphs with noisy features, sparse features, noisy labels, and sparse labels. Empirical results indicate the superiority and robustness of LaenNet compared to the state-of-the-art baseline models. The implementation code is available to ease reproducibility1.


Assuntos
Aprendizagem , Reprodutibilidade dos Testes
7.
Medicine (Baltimore) ; 102(39): e34700, 2023 Sep 29.
Artigo em Inglês | MEDLINE | ID: mdl-37773847

RESUMO

The dysregulation of adenylate cyclase-associated protein 1 (CAP1) is associated with a variety of inflammatory conditions. Here, we aimed to assess the role of serum CAP1 protein in predicting acute myocardial infarction (AMI), and to explore its effect and mechanism in vascular endothelial cells injury. ELISA was utilized to detected CAP1 protein expression in serum from 70 patients with first-time AMI at 0, 6, 12, 24, 48 hours and 7 days of the onset of chest pain. Receiver operating characteristic (ROC) curve analysis was administered to analyze the diagnostic power of CAP1 for AMI. The CCK-8 and 5-BrdU assays were applied to measure cell proliferation and inflammation in a model of oxidized low-density lipoprotein (ox-LDL) induced human umbilical vein endothelial cells (HUVEC). Luciferase reporter gene assay and Western blotting were used to assess the activity of NF-κB pathway. Results showed that serum CAP1 protein expression was upregulated in patients with first-time AMI, its expression was highest at 12 hours of the onset of chest pain. CAP1 protein was positively associated with the levels of cTnI and ox-LDL. CAP1 showed a relatively high diagnostic accuracy in patients with first-time AMI compared with cTnI, and CAP1 combined with cTnI had superior diagnostic value than CAP1 and cTnI alone. The expression of CAP1 protein was increased in supernatants of ox-LDL induced HUVEC in a dose- and time-dependent manner. CAP1 inhibited cell proliferation but promoted inflammation, and induced the activation of NF-κB pathway in vitro. To sum up, increased serum CAP1 expression might serve as a novel diagnostic biomarker for patients with first-time AMI, the mechanism might be related to its induction of NF-κB pathway activation causing abnormal proliferation and inflammation and thus mediating vascular endothelial cell injury.


Assuntos
Proteínas do Citoesqueleto , MicroRNAs , Infarto do Miocárdio , Humanos , Proteínas de Ciclo Celular/metabolismo , Dor no Peito , Proteínas do Citoesqueleto/sangue , Células Endoteliais da Veia Umbilical Humana , Inflamação/metabolismo , Lipoproteínas LDL/farmacologia , MicroRNAs/metabolismo , NF-kappa B/metabolismo
8.
ESC Heart Fail ; 10(6): 3287-3298, 2023 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-37671738

RESUMO

AIMS: A high red blood cell distribution width (RDW) at admission or discharge is associated with a worse prognosis in hospitalized patients with heart failure (HF), and the prognostic value of the in-hospital change in RDW (∆RDW) remains debatable. METHODS AND RESULTS: We included 5514 patients with critical illness and HF from the MIMIC-IV database. The ΔRDW was calculated by the RDW at discharge minus that at admission. Clinical outcomes included all-cause mortality at 90 day, 180 day, and 1 year after discharge. The median age of the patients was 73.91 years, and 46.37% were women. Kaplan-Meier curve and Cox regression analyses were used to examine the association between the ΔRDW and all-cause mortality at different time points. A multivariable Cox proportional hazard model showed that the ΔRDW (per 1% increase) was independently associated with all-cause mortality at 90 day, 180 day, and 1 year after adjusting for confounding factors (hazard ratio [HR] = 1.17, 95% confidence interval [CI] = 1.13-1.21, P < 0.001; HR = 1.17, 95% CI = 1.14-1.20, P < 0.001; and HR = 1.18, 95% CI = 1.15-1.20, P < 0.001, respectively). Restricted cubic splines showed a non-linear relationship between the ΔRDW and the risk of clinical outcomes. High ΔRDW was associated with a high risk of mortality at different time points. A subgroup analysis showed that this positive association remained consistent in pre-specified subgroups. CONCLUSIONS: Our study suggests that an increased RDW during hospitalization is independently associated with short- or long-term all-cause mortality in critical-ill patients with HF.


Assuntos
Estado Terminal , Insuficiência Cardíaca , Humanos , Feminino , Idoso , Masculino , Índices de Eritrócitos , Eritrócitos , Hospitais
9.
Artigo em Inglês | MEDLINE | ID: mdl-37605410

RESUMO

BACKGROUND: Diffuse large B-cell lymphoma (DLBCL) is the most common type of non-Hodgkin's lymphoma worldwide. Novel treatment strategies are still needed for refractory or relapsed DLBCL. OBJECTIVE: The present study aimed to systematically explore the potential targets and molecular mechanisms of matrine in the treatment of DLBCL. METHODS: Potential matrine targets were collected from multiple platforms. Microarray data and clinical characteristics of DLBCL were downloaded from publicly available databases. Differential expression analysis and weighted gene co-expression network analysis (WGCNA) were applied to identify the hub genes of DLBCL using R software. Then, the shared target genes between matrine and DLBCL were identified as the potential targets of matrine against DLBCL. The least absolute shrinkage and selection operator (LASSO) algorithm was used to determine the final core target genes, which were further verified by molecular docking simulation and receiver operating characteristic (ROC) curve analysis. Functional analysis was also performed to elucidate the potential mechanisms. RESULTS: A total of 222 matrine target genes and 1269 DLBCL hub genes were obtained through multiple databases and machine learning algorithms, respectively. From the nine shared target genes of matrine and DLBCL, five final core target genes, including CTSL, NR1H2, PDPK1, MDM2, and JAK3, were identified. Molecular docking showed that the binding of matrine to the core genes was stable. ROC curves also suggested close associations between the core genes and DLBCL. Additionally, functional analysis showed that the therapeutic effect of matrine against DLBCL may be related to the PI3K-Akt signaling pathway. CONCLUSION: Matrine may target five genes and the PI3K-Akt signaling pathway in DLBCL treatment.

10.
Animals (Basel) ; 13(12)2023 Jun 20.
Artigo em Inglês | MEDLINE | ID: mdl-37370546

RESUMO

Today, large-scale Penaeus monodon farms no longer incubate eggs but instead purchase larvae from large-scale hatcheries for rearing. The accurate counting of tens of thousands of larvae in these transactions is a challenging task due to the small size of the larvae and the highly congested scenes. To address this issue, we present the Penaeus Larvae Counting Strategy (PLCS), a simple and efficient method for counting Penaeus monodon larvae that only requires a smartphone to capture images without the need for any additional equipment. Our approach treats two different types of keypoints as equip keypoints based on keypoint regression to determine the number of shrimp larvae in the image. We constructed a high-resolution image dataset named Penaeus_1k using images captured by five smartphones. This dataset contains 1420 images of Penaeus monodon larvae and includes general annotations for three keypoints, making it suitable for density map counting, keypoint regression, and other methods. The effectiveness of the proposed method was evaluated on a real Penaeus monodon larvae dataset. The average accuracy of 720 images with seven different density groups in the test dataset was 93.79%, outperforming the classical density map algorithm and demonstrating the efficacy of the PLCS.

11.
Chin Med J (Engl) ; 136(10): 1198-1206, 2023 May 20.
Artigo em Inglês | MEDLINE | ID: mdl-37052146

RESUMO

BACKGROUND: Right ventricular (RV)-arterial uncoupling is a powerful independent predictor of prognosis in heart failure with preserved ejection fraction (HFpEF). Coronary artery disease (CAD) can contribute to the pathophysiological characteristics of HFpEF. This study aimed to evaluate the prognostic value of RV-arterial uncoupling in acute HFpEF patients with CAD. METHODS: This prospective study included 250 consecutive acute HFpEF patients with CAD. Patients were divided into RV-arterial uncoupling and coupling groups by the optimal cutoff value, based on a receiver operating characteristic curve of tricuspid annular plane systolic excursion to pulmonary artery systolic pressure (TAPSE/PASP). The primary endpoint was a composite of all-cause death, recurrent ischemic events, and HF hospitalizations. RESULTS: TAPSE/PASP ≤0.43 provided good accuracy in identifying patients with RV-arterial uncoupling (area under the curve, 0.731; sensitivity, 61.4%; and specificity, 76.6%). Of the 250 patients, 150 and 100 patients could be grouped into the RV-arterial coupling (TAPSE/PASP >0.43) and uncoupling (TAPSE/PASP ≤0.43) groups, respectively. Revascularization strategies were slightly different between groups; the RV-arterial uncoupling group had a lower rate of complete revascularization (37.0% [37/100] vs . 52.7% [79/150], P <0.001) and a higher rate of no revascularization (18.0% [18/100] vs . 4.7% [7/150], P <0.001) compared to the RV-arterial coupling group. The cohort with TAPSE/PASP ≤0.43 had a significantly worse prognosis than the cohort with TAPSE/PASP >0.43. Multivariate Cox analysis showed TAPSE/PASP ≤0.43 as an independent associated factor for the primary endpoint, all-cause death, and recurrent HF hospitalization (hazard ratios [HR]: 2.21, 95% confidence interval [CI]: 1.44-3.39, P <0.001; HR: 3.32, 95% CI: 1.30-8.47, P = 0.012; and HR: 1.93, 95% CI: 1.10-3.37, P = 0.021, respectively), but not for recurrent ischemic events (HR: 1.48, 95% CI: 0.75-2.90, P = 0.257). CONCLUSION: RV-arterial uncoupling, based on TAPSE/PASP, is independently associated with adverse outcomes in acute HFpEF patients with CAD.


Assuntos
Doença da Artéria Coronariana , Insuficiência Cardíaca , Disfunção Ventricular Direita , Humanos , Prognóstico , Estudos Prospectivos , Volume Sistólico/fisiologia , Ecocardiografia Doppler/efeitos adversos , Doença da Artéria Coronariana/complicações , Artéria Pulmonar/diagnóstico por imagem , Função Ventricular Direita/fisiologia
12.
Mol Immunol ; 157: 8-17, 2023 05.
Artigo em Inglês | MEDLINE | ID: mdl-36958140

RESUMO

TBK1-IRF3 complex plays vital roles in antiviral immune responses, its regulatory mechanisms are currently incompletely understood. p120-catenin (p120), an armadillo-repeat protein, mainly regulates the stability of classical cadherins and the development of epithelial-to-mesenchymal transitions (EMTs). Here we report that p120 is a positive regulator of type I IFN production. Ectopic expression of p120 enhanced Vesicular stomatitis virus and Sendai-virus-induced type I IFN production, whereas knockdown of p120 expression suppressed type I IFN production. Mechanistically, p120 promoted phosphorylation of IRF3 via stabilizing the TBK1-IRF3 complex. Consistently, p120 knock down mice are more susceptible to VSV infection as indicated by higher tissue viral titers, less IFN-I production and greater infiltration of immune cells. This study reveals p120 as an important positive regulator in innate immunity and identifies that p120 facilitates host antiviral response through stabilizing TBK1-IRF3 complex.


Assuntos
Interferon Tipo I , Proteínas Serina-Treonina Quinases , Animais , Camundongos , Proteínas Serina-Treonina Quinases/metabolismo , delta Catenina , Antivirais , Imunidade Inata , Fosforilação , Fator Regulador 3 de Interferon/metabolismo
13.
Sci Total Environ ; 858(Pt 1): 159807, 2023 Feb 01.
Artigo em Inglês | MEDLINE | ID: mdl-36461568

RESUMO

Antibiotics have been widely used for improving human and animal health and well-being for many decades. However, the enormous antibiotic usage in agriculture especially for livestock leads to considerable quantities of antibiotic residues in associated food products and can reach potentially hazardous levels for consumers. Therefore, timely detection and systematical surveillance on residual antibiotics in food materials are of significance to minimize the negative impact caused by such unwanted antibiotic leftovers. To this end, we constructed a cloud-platform-based system (ARSCP) for comprehensive surveillance of antibiotic residues in food materials. With the system, we collected 126,560 samples from 68 chicken farms across China and detected the antibiotic residues using a rapid detection colorimetric commercial (Explorer 2.0) kit and UPLC-MS/MS. Only 108 (0.085 %) of the samples contained residual antibiotics exceeding the MRLs and all data were subjected to ARSCP system to provide a landscape of antibiotic residues in China. As a proof-of-concept, we provided an overview of residual antibiotics based on data from China, but the system is generally applicable to track and monitor the antibiotic residues globally when the data from other countries are incorporated. We used the combined Explorer 2.0 and MS data to construct ARSCP, an antimicrobial residue surveillance cloud platform for raw chicken samples. ARSCP can be used for rapid detection and real-time monitoring of antibiotic residues in animal food and provides both data management and risk warning functions. This system provides a solution to improve the management of facilities that must monitor antibiotic MRLs in food animal products that can reduce the pollution of antibiotics to the environment.


Assuntos
Anti-Infecciosos , Computação em Nuvem , Animais , Humanos , Cromatografia Líquida , Espectrometria de Massas em Tandem , Antibacterianos , Ração Animal , Progressão da Doença
14.
Front Med (Lausanne) ; 9: 1040168, 2022.
Artigo em Inglês | MEDLINE | ID: mdl-36582294

RESUMO

Background: Emergence agitation (EA) is common in patients after general anesthesia (GA) and is associated with poor outcomes. Patients with thoracic surgery have a higher incidence of EA compared with other surgery. This study aimed to investigate the impact of pre-anesthetic butorphanol infusion on the incidence of EA in patients undergoing thoracic surgery with GA. Materials and methods: This prospective randomized controlled trial (RCT) was conducted in 20 tertiary hospitals in China. A total of 668 patients undergoing elective video-assisted thoracoscopic lobectomy/segmentectomy for lung cancer were assessed for eligibility, and 620 patients were enrolled. In total, 296 patients who received butorphanol and 306 control patients were included in the intention-to-treat analysis. Patients in the intervention group received butorphanol 0.02 mg/kg 15 min before induction of anesthesia. Patients in the control group received volume-matched normal saline in the same schedule. The primary outcome was the incidence of EA after 5 min of extubation, and EA was evaluated using the Riker Sedation-Agitation Scale (RSAS). The incidence of EA was determined by the chi-square test, with a significance of P < 0.05. Results: In total, 296 patients who received butorphanol and 306 control patients were included in the intention-to-treat analysis. The incidence of EA 5 min after extubation was lower with butorphanol treatment: 9.8% (29 of 296) vs. 24.5% (75 of 306) in the control group (P = 0.0001). Patients who received butorphanol had a lower incidence of drug-related complications (including injecting propofol pain and coughing with sufentanil): 112 of 296 vs. 199 of 306 in the control group (P = 0.001) and 3 of 296 vs. 35 of 306 in the control group (P = 0.0001). Conclusion: The pre-anesthetic administration of butorphanol reduced the incidence of EA after thoracic surgery under GA. Clinical trial registration: [http://www.chictr.org.cn/showproj.aspx?proj=42684], identifier [ChiCTR1900025705].

15.
BMC Cancer ; 22(1): 1277, 2022 Dec 07.
Artigo em Inglês | MEDLINE | ID: mdl-36474188

RESUMO

BACKGROUND: Speckle-type POZ protein(SPOP), a substrate adaptor of Cul3 ubiquitin ligase, plays crucial roles in solid neoplasms by promoting the ubiquitination and degradation of substrates. Limited studies have shown that SPOP is overexpressed in human renal cell carcinoma (RCC) tissue. However, the exact role of SPOP in RCC remains unclear and needs to be further elucidated. The present study showed that SPOP was expressed at different levels in different RCC cell lines. The purpose of this study was to explore the roles of SPOP in the biological features of RCC cells and the expression levels of SPOP in human tissue microarray (TMA) and kidney tissues. METHODS: Here, SPOP was overexpressed by lentiviral vector transfection in ACHN and Caki-1 cells, and SPOP was knocked down in Caki-2 cells with similar transfection methods. The transfection efficiency was evaluated by quantitative PCR and western blotting analyses. The role of SPOP in the proliferation, migration, invasion and apoptosis of cell lines was determined by the MTT, wound-healing, transwell and flow cytometry assays. Moreover, the cells were treated with different drug concentrations in proliferation and apoptosis assays to investigate the effect of sunitinib and IFN-α2b on the proliferation and apoptosis of SPOP-overexpressing cells and SPOP-knockdown RCC cells. Finally, immunohistochemical staining of SPOP was performed in kidney tissues and TMAs, which included RCC tissues and corresponding adjacent normal tissues. RESULTS: Overexpression of SPOP inhibited cell proliferation, migration and invasion and increased cell apoptosis. Interestingly, sunitinib and IFN-α2b at several concentrations increased the proliferation inhibitory rate and total apoptosis rate of cells overexpressing SPOP. The findings of the present study showed that the SPOP protein was significantly expressed at low levels in most clear cell RCC (ccRCC) tissues and at relatively high levels in the majority of adjacent normal tissues and kidney tissues. Kaplan-Meier survival analysis showed that there was no statistically significant difference in cumulative survival based on the data of different SPOP expression levels in TMA and patients. CONCLUSIONS: In contrast to previous studies, our findings demonstrated that overexpression of SPOP might suppress the progression of RCC cells, which was supported by cell experiments and immunohistochemical staining. SPOP could be a potential tumour inhibitor in RCC.


Assuntos
Carcinoma de Células Renais , Neoplasias Renais , Humanos , Carcinoma de Células Renais/genética , Neoplasias Renais/genética , Proteínas Nucleares/genética , Proteínas Repressoras/genética
16.
Front Genet ; 13: 967378, 2022.
Artigo em Inglês | MEDLINE | ID: mdl-36406111

RESUMO

Background: Clear cell renal cell carcinoma (ccRCC) is the most common pathological type of renal cell carcinoma. Tetratricopeptide repeat domain 21A (TTC21A), known as a component of intraflagellar transport complex A which is essential for the function of cilia, However, the role of TTC21A remains unclear in ccRCC. For the first time, we explore the role and potential mechanism of TTC21A in ccRCC based on multiple databases. Methods: TTC21A expression across all TCGA tumor was analyzed via Tumor Immune Estimation Resource (TIMER) site. The correlation between TTC21A and clinicopathologic characteristics of ccRCC was analyzed with TCGA database. The diagnostic and prognostic value of TTC21A was evaluated by receiver operation characteristic curve, Kaplan-Meier plotter and Cox regression respectively. Moreover, functional enrichment analysis of TTC21A and the co-expression genes were performed by Gene Set Enrichment Analysis. The correlation of TTC21A and immune infiltration were evaluated by single sample Gene Set Enrichment Analysis. Results: Pan-cancer analysis indicated that TTC21A was highly expressed in ccRCC and other cancer. In addition, elevated expression of TTC21A was associated with worse overall survival in ccRCC patients. Functional enrichment analysis showed that TTC21A and the co-expressed genes enriched in glucose metabolism and energy metabolism. Moreover, TTC21A expression was associated with infiltrating levels of dendritic cell, nature killer cell and other immune marker sets. Conclusion: The results of analysis indicate that expression of TTC21A is associated with poor prognosis and immune infiltrating in ccRCC, which suggested TTC21A might be used as a potential predictor and target of treatment in ccRCC.

17.
Artigo em Inglês | MEDLINE | ID: mdl-36417733

RESUMO

Document distance is a fundamental yet significant research topic in the information retrieval community, and its accuracy dominates the performance of many text retrieval applications. Beyond the Bag-of-Words (BoW) model, the Word Mover's Distance (WMD) semantically defines the distance between documents as the minimum cost (i.e. measured by word similarities of embeddings) required to transport the words from one document to another, and it has been proven to be superior by k-nearest neighbor classification. In this article, we thoroughly study the characteristics of WMD and its relaxed versions, e.g. Relaxed WMD (RWMD) and Iterative Constrained Transfers (ICT), in various scenarios. Specifically, we concentrate on the problem of negative word similarity: the WMD family leverages all word similarities, however, most of them are meaningless, resulting in negative effects for measuring document distances. To remedy this problem, we propose Informative Similarity Filter (ISF), which retains a very small percentage of top word similarities and fixes the others as the same lower similarity. Built on it, we propose a greedy optimization (GOM) for WMD, an accurate approximation to WMD. We theoretically analyze that is more applicable for relatively longer documents. Extensive experiments have been conducted to validate: 1) the problem of RWMD; 2) the effectiveness of ; and 3) the consistence of our analysis of . Our codes and datasets are available at https://github.com/BoCheng-96/ISF-GOM.

18.
Phys Chem Chem Phys ; 24(43): 26564-26574, 2022 Nov 09.
Artigo em Inglês | MEDLINE | ID: mdl-36285566

RESUMO

The amidogen radical (NH2) and its associated N(2D) + H2(X1Σ+g) → H(2S) + NH(X3Σ-) reaction have great significance in interstellar chemistry and the accurate potential energy surface (PES) is the basis for studying them. We report a new and accurate PES for the ground state NH2(X2A'') using the combined-hyperbolic-inverse-power-representation methodology based on 7970 ab initio energy points computed at the Davidson-corrected internally contracted multireference configuration interaction level of theory. Both aug-cc-pVTZ and aug-cc-pVQZ basis sets have been employed to extrapolate the energies to the complete basis set limit. The analytical PES reproduces well with the ab initio energy points with a root mean square deviation of 55.7 cm-1. The topographical features of the analytical PES are examined in detail and agree well with the previous theoretical results. The integral cross sections and rate constants of the N(2D) + H2(X1Σ+g) → H(2S) + NH(X3Σ-) reaction are obtained using the quasi-classical trajectory method and the time-dependent wave packet method and then compared with the available theoretical and experimental values.

19.
Cardiol Res Pract ; 2022: 1638209, 2022.
Artigo em Inglês | MEDLINE | ID: mdl-36051574

RESUMO

Proprotein convertase subtilisin/kexin type 9 (PCSK9) inhibitors have been shown to inhibit pyroptosis and apoptosis, which play important roles in the development and progression of contrast-induced acute kidney injury (CI-AKI). However, to the best of our knowledge, no studies have investigated the potential effect of PCSK9 inhibitors on the prevalence of CI-AKI after percutaneous coronary intervention (PCI). This study aimed to determine whether PCSK9 inhibitors are associated with the prevalence of CI-AKI. The medical records of 309 (mean age, 63.35 years; 71.84% male) patients with acute myocardial infarction who underwent PCI at our institution were retrospectively analyzed. Overall, 149 and 160 patients were assigned to the evolocumab and control groups, respectively. Serum creatinine levels were examined preoperatively and 24-72 h postoperatively and compared between groups. Data were grouped according to the occurrence of CI-AKI, and a univariate analysis was conducted to exclude suspected influencing factors that led to CI-AKI occurrence. After adjusting for confounding factors, a logistic regression analysis was performed to assess the association between evolocumab administration (independent variable) and CI-AKI occurrence (dependent variable). The prevalence of CI-AKI was significantly lower in the evolocumab group (6.7%) than in the control group (20.0%; p < 0.01).We further evaluated the correlation between exposure factor and outcome. The relative risk(RR) between the use of evolocumab and the occurrence of CI-AKI was 0.34(95% CI 0.17-0.66,p<0.01).This result indicate a significant association between the use of evolocumab and a reduction in the incidence of CI-AKI.The logistic regression analysis results revealed that evolocumab was significantly associated with CI-AKI. The use of PCSK9 inhibitors, hydration therapy, and statin administration appears promising for preventing CI-AKI in patients with acute myocardial infarction undergoing PCI.

20.
Chemosphere ; 308(Pt 2): 136383, 2022 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-36088979

RESUMO

BACKGROUND: Phthalates are commonly used in variety of plastic products. Previously it has been revealed that di (2-ethylhexyl) phthalate (DEHP), as the most common member of the class of phthalates, may disturb cholesterol homeostasis and deregulate the inflammatory response, and leading to accelerate the atherosclerosis process. In this regard, the aim of the current study is to explore the underlying mechanism of DEHP-induced atherosclerosis through the increasing of foam cell formation and Vascular Smooth Muscle Cells (VSMCs) damage via the interaction of long-non coding RNA (GAS5) and miR-145-5p. METHODS: ApoE-/- mice were used to evaluate the in vivo study. RAW264.7 and VSMCs were used to evaluate the effect of DEHP on formation of foam cell, cell proliferation, and cell damage in vitro. Animals were treated with DEHP (5% w/w of food) orally and cells were treated with medium containing of 100 µM DEHP; qRT-PCR, Western blotting, flowcytometry, IHC, oil red O, BODIPY, and autophagic vacuoles assay were used to evaluate the effect of DEHP on formation of atherosclerosis. RESULTS: DEHP significantly accelerated the formation of atherosclerosis in mice and alter the lipid profile in mice. In addition, after treating VSMCs with DEHP, GAS5 was significantly up-regulated and miR-145-5p was down-regulated. In VSMCs treated with DEHP, we observed that GAS5 could be used as the competing endogenous RNA (ceRNA) of miR-145-5p to regulate the proliferation and apoptosis of VSMCs; and the expression of GAS5 was correlated with the expression of miR-145-5p. DEHP increased the ox-LDL uptake by macrophage and increasing the formation of foam cells. Besides, GAS5 knocking down reversed the effect of DEHP on foam cell formation and ox-LDL uptake. CONCLUSION: DEHP could accelerate the atherosclerosis process through increasing VSMCs damage and formation of macrophage foam cell by increasing lipid uptake though down regulating lncRNA GAS5 and altering in regulation of miR-145-5p.


Assuntos
Aterosclerose , Dietilexilftalato , MicroRNAs , RNA Longo não Codificante , Animais , Apolipoproteínas E/genética , Apolipoproteínas E/metabolismo , Apolipoproteínas E/farmacologia , Aterosclerose/induzido quimicamente , Aterosclerose/metabolismo , Movimento Celular , Proliferação de Células , Colesterol/metabolismo , Dietilexilftalato/metabolismo , Células Espumosas/metabolismo , Lipoproteínas LDL/metabolismo , Lipoproteínas LDL/farmacologia , Macrófagos/metabolismo , Camundongos , MicroRNAs/metabolismo , Músculo Liso Vascular/metabolismo , Ácidos Ftálicos , Plásticos/metabolismo , RNA Longo não Codificante/genética , RNA Longo não Codificante/metabolismo
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