Can quarantine plant-parasitic nematodes within wastes be managed by useful tools in a circular economy approach?

Seen as an integral part of sustainable development, circular economy represents a model of production and consumption notably based on the limitation of both resource wastage and environmental impact. Laboratories and commercial companies working on plant pathogens, in particular quarantine species, must effectively disinfect their waste to avoid disseminating these organisms. The methods used for waste disinfection can however incur high energy costs or pose environmental and human health hazards. Here, we tested the effectiveness of five disinfection methods - chlorination, heat treatment, composting, mesophilic methanation and waste stabilization ponds - on plant-parasitic nematodes belonging to the genera Globodera and Meloidogyne. For the widely used chlorination and heat treatment methods, we showed that they can be very effective in inactivating nematodes at relatively low chlorine doses and temperatures (60 °C-3 min and 50 °C-30 min), respectively. For the three other disinfection methods tested, initially designed for waste recycling, we obtained different levels of efficiency. Composting and mesophilic methanation (based on cattle or pig slurry) both led to the complete elimination of nematodes, even for short treatment durations. However, waste stabilization ponds showed contrasting results, ranging from virtually no effect to high levels of inactivation of nematodes. Our study demonstrates that it is possible to use more environmentally friendly disinfection methods to control plant-parasitic nematodes. In particular, this finding paves the way towards the treatment of infected plant materials using composting or methanation, providing that disinfection is still reached under other (real-life) treatment conditions, especially with other kinds of waste. Both composting and methanation recycle and thus valorize infected waste; they are viable alternatives to landfilling or incineration, thereby demonstrating the usefulness of a circular economy approach.

Hatching Induction of Cyst Nematodes in Bare Soils Drenched With Root Exudates Under Controlled Conditions.

Cyst nematodes account for substantial annual yield losses in crop production worldwide. Concerns over environmental and health issues due to the use of chemical nematicides mean alternative sustainable and integrated solutions are urgently required. Hatch induction of encysted eggs in the absence of host plants, i.e., 'suicide-hatching,' could be a sustainable alternative in reducing population densities of cyst nematodes in infested soils. Here we examined in situ hatching of encysted eggs of Globodera pallida, Heterodera carotae, and Heterodera schachtii at varying soil depths, following exogenous applications of host root exudates in repeated glasshouse experiments. Cysts were retrieved 30 or 43 days post-incubation depending on the nematode species and assessed for hatching rates relative to the initial number of viable eggs per cyst. Hatching of the potato cyst nematode G. pallida depended on both soil moisture and effective exposure to root exudates, and to a lesser extent on exudate concentration. The carrot cyst nematode H. carotae had over 75% hatched induced by root exudate irrespective of the concentration, with better hatch induction at 20 cm as compared with 10 cm soil depth. Hatching of the beet cyst nematode H. schachtii largely depended on the soil moisture level at constant temperature, rather than the type or concentration of root exudates applied. As a conclusion, exogenously applied host root exudates may play a major role in inducing in situ hatch of encysted eggs of potato and carrot cyst nematodes in the absence of host plant under favorable soil temperature/moisture conditions. To improve such strategy, the characterization of chemical profiles of the root exudate composition and field validation are currently ongoing.

A Trade-Off Between Sporangia Size and Number Exists in the Potato Late Blight Pathogen Phytophthora infestans, and Is Not Altered by Biotic and Abiotic Factors.

The negative relationship between offspring size and number is a classic example of trade-off between life-history traits, reported many times in animal and plant species. Here, we wanted to ascertain whether such a trade-off occurred in the oomycete Phytophthora infestans, and whether it was impacted by biotic and abiotic factors. We thus conducted three infection experiments under controlled conditions and measured the number and the size of sporangia (asexual propagules) produced on potato by different P. infestans isolates. In all experiments, we observed a negative relationship between sporangia size and number, demonstrating the existence of a trade-off. Moreover, although the potato host cultivar, temperature and host of origin (tomato or potato) all affected sporangia number, sporangia size or both, none of these biotic and abiotic factors did change the trade-off. Therefore, the trade-off between sporangia size and number could maintain the polyphenism for these traits in P. infestans populations, and favors the coexistence of distinct reproductive strategies within this species. Our results emphasize the relevance to focus on the relationship between offspring size and number in other fungal plant pathogens, as well as to study the impact of offspring size on fitness-linked traits (virulence and disease lesion development) in these organisms.

Local adaptation to temperature in populations and clonal lineages of the Irish potato famine pathogen Phytophthora infestans.

Environmental factors such as temperature strongly impact microbial communities. In the current context of global warming, it is therefore crucial to understand the effects of these factors on human, animal, or plant pathogens. Here, we used a common-garden experiment to analyze the thermal responses of three life-history traits (latent period, lesion growth, spore number) in isolates of the potato late blight pathogen Phytophthora infestans from different climatic zones. We also used a fitness index (FI) aggregating these traits into a single parameter. The experiments revealed patterns of local adaptation to temperature for several traits and for the FI, both between populations and within clonal lineages. Local adaptation to temperature could result from selection for increased survival between epidemics, when isolates are exposed to more extreme climatic conditions than during epidemics. We also showed different thermal responses among two clonal lineages sympatric in western Europe, with lower performances of lineage 13_A2 compared to 6_A1, especially at low temperatures. These data therefore stress the importance of thermal adaptation in a widespread, invasive pathogen, where adaptation is usually considered almost exclusively with respect to host plants. This must now be taken into account to explain, and possibly predict, the global distribution of specific lineages and their epidemic potential.