Exploring glycine root uptake dynamics in phosphorus and iron deficient tomato plants during the initial stages of plant development.

BACKGROUND: Phosphorus (P) and iron (Fe) deficiencies are relevant plants nutritional disorders, prompting responses such as increased root exudation to aid nutrient uptake, albeit at an energy cost. Reacquiring and reusing exudates could represent an efficient energy and nitrogen saving strategy. Hence, we investigated the impact of plant development, Fe and P deficiencies on this process. Tomato seedlings were grown hydroponically for 3 weeks in Control, -Fe, and -P conditions and sampled twice a week. We used Isotope Ratio Mass-Spectrometry to measure δ13C in roots and shoots after a 2-h exposure to 13C-labeled glycine (0, 50, or 500 µmol L-1). Plant physiology was assessed with an InfraRed Gas Analyzer and ionome with an Inductively Coupled Plasma Mass-Spectrometry. RESULTS: Glycine uptake varied with concentration, suggesting an involvement of root transporters with different substrate affinities. The uptake decreased over time, with -Fe and -P showing significantly higher values as compared to the Control. This highlights its importance during germination and in nutrient-deficient plants. Translocation to shoots declined over time in -P and Control but increased in -Fe plants, suggesting a role of Gly in the Fe xylem transport. CONCLUSIONS: Root exudates, i.e. glycine, acquisition and their subsequent shoot translocation depend on Fe and P deficiency. The present findings highlight the importance of this adaptation to nutrient deficiencies, that can potentially enhance plants fitness. A thorough comprehension of this trait holds potential significance for selecting cultivars that can better withstand abiotic stresses.

Copper and zinc as a window to past agricultural land-use.

Intensive agricultural management significantly affects soil chemical properties. Such impacts, depending on the intensity of agronomic practices, might persist for several decades. We tested how current soil properties, especially heavy metal concentrations, reflect the land-use history over a 24,000 ha area dominated by intensive apple orchards and viticulture (South Tyrol, ITA). We combined georeferenced soil analyses with land-use maps from 1850 to 2010 in a space-for-time approach to detect the accumulation rates of copper and zinc and understand how present-day soil heavy metal concentrations reflect land-use history. Soils under vineyards since the 1850s showed the highest available copper concentration (median of 314.0 mg kg-1, accumulation rate between 19.4 and 41.3 mg kg-1·10 y-1). Zinc reached the highest concentration in the same land-use type (median of 32.5 mg kg-1, accumulation rate between 1.8 and 4.4 mg kg-1·10 y-1). Using a random forest approach on 44,132 soil samples, we extrapolated land-use history on the permanent crop area of the region, reaching an accuracy of 0.72. This suggests that combining current soil analysis, historical management information, and machine learning models provides a valuable tool to predict land-use history and understand management legacies.

Synergism and antagonisms between nutrients induced by copper toxicity in grapevine rootstocks: Monocropping vs. intercropping.

The long-term use of Cu-containing fungicides contaminates vineyards soils, which can induce Cu toxicity and nutrient imbalances in several plant species. The aim of this work was to evaluate the effect of Cu toxicity on two grapevine rootstocks, Fercal and 196.17, and to elucidate if intercropping with oat can alleviate grapevine Cu toxicity. Plants were hydroponically-cultivated and treated with different Cu concentrations. At harvest the biomass accumulation, the SPAD index and the symplastic and apoplastic root and leaves ionome were measured to evaluate possible synergistic and/or antagonistic effects on other micro- and macronutrients. The root exudation analysis was correlated with genes expression (VvPEZ-like), whereas PCA analysis performed on the grapevine and oat ionome revealed that both mono- and intercropped 196.17 rootstock display a positive effect on Zn and Mn in the root tissues at high Cu concentrations. An increase of Zn and Mn in roots was also reported for the intercropped Fercal rootstock at high Cu concentrations while an antagonistic relation was reported for root Zn concentration in the monocropped Fercal rootstock. Our results showed that grapevine and oat compete for nutrient uptake and that this phenomenon can possibly alleviate grapevine Cu toxicity. However, Fercal rootstock is able to take advantage from oat, while 196.17 is disadvantaged by the intercropping system. Even though intercropping system seems to be a valuable tool to counteract grapevine Cu toxicity, the application of this agricultural practice has shown to be species dependent and should be evaluated for each rootstock.

Plant-Microbiota Interactions as a Driver of the Mineral Turnover in the Rhizosphere.

A major challenge facing agriculture in the 21st century is the need to increase the productivity of cultivated land while reducing the environmentally harmful consequences of mineral fertilization. The microorganisms thriving in association and interacting with plant roots, the plant microbiota, represent a potential resource of plant probiotic function, capable of conjugating crop productivity with sustainable management in agroecosystems. However, a limited knowledge of the organismal interactions occurring at the root-soil interface is currently hampering the development and use of beneficial plant-microbiota interactions in agriculture. Therefore, a comprehensive understanding of the recruitment cues of the plant microbiota and the molecular basis of nutrient turnover in the rhizosphere will be required to move toward efficient and sustainable crop nutrition. In this chapter, we will discuss recent insights into plant-microbiota interactions at the root-soil interface, illustrate the processes driving mineral dynamics in soil, and propose experimental avenues to further integrate the metabolic potential of the plant microbiota into crop management and breeding strategies for sustainable agricultural production.

Characterization of plant growth promoting traits of bacterial isolates from the rhizosphere of barley (Hordeum vulgare L.) and tomato (Solanum lycopersicon L.) grown under Fe sufficiency and deficiency.

Plant Growth Promoting Bacteria (PGPB) are considered a promising approach to replace the conventional agricultural practices, since they have been shown to affect plant nutrient-acquisition processes by influencing nutrient availability in the rhizosphere and/or those biochemical processes determining the uptake at root level of nitrogen (N), phosphorus (P), and iron (Fe), that represent the major constraints for crop productivity worldwide. We have isolated novel bacterial strains from the rhizosphere of barley (Hordeum vulgare L.) and tomato (Solanum lycopersicon L.) plants, previously grown in hydroponic solution (either Fe deficient or Fe sufficient) and subsequently transferred onto an agricultural calcareous soil. PGPB have been identified by molecular tools and characterized for their capacity to produce siderophores and indole-3-acetic acid (IAA), and to solubilize phosphate. Selected bacterial isolates, showing contemporarily high levels of the three activities investigated, were finally tested for their capacity to induce Fe reduction in cucumber roots two isolates, from barley and tomato plants under Fe deficiency, significantly increased the root Fe-chelate reductase activity; interestingly, another isolate enhanced the reduction of Fe-chelate reductase activity in cucumber plant roots, although grown under Fe sufficiency.

Effects of aluminum sorption on calcium-polygalacturonate network used as soil-root interface model.

The objective of this study is to determine the influence of aluminum sorption on a calcium-polygalacturonate (Ca-PG) network used as a soil-root interface model. The Ca-PG network is exposed to aluminum solutions at different concentrations (25-800 microM) at pH 3.50. High concentrations lead to a release of calcium (80%) and aluminum becomes the predominant reticulating cation of the polygalacturonic chains. The FTIR spectra show how aluminum sorption induces shifts of the characteristic bands of carbohydrates in the spectral regions of 1700-1400 and 1200-800 cm(-1), which are enhanced by decreasing intensities. This might be induced by a weakening of the metal-PG complex through conformational variations of the structure. Scanning electron micrographs also show a collapse of the fibrillar structure of Ca-PG that is due to aluminum sorption. This structural rearrangement suggests that the soil-root interface could modify its functionality, affecting the transport of metal ions (nutrients) across the interface and consequently through the cell membranes.

The potential of diffuse reflectance spectroscopy for the determination of carbon inventories in soils.

Investigations have shown that near- and mid-infrared reflectance spectroscopy can accurately determine organic-C in soil. Efforts have also demonstrated that both can differentiate between organic and inorganic-C in soils, but the mid-infrared produces more accurate calibrations. Nevertheless, the greatest benefit would come with in situ determinations where factors such as particle size, sample heterogeneity and moisture can be important. While the variations in large (> 20 mesh) particle size can adversely effect calibration accuracy, efforts have demonstrated that the scanning of larger amounts of sample can overcome this, but the effects of moisture have not been fully explored. While under in situ conditions C distribution and sample heterogeneity are a problem for any analytical method, the rapid analysis possible with spectroscopic techniques will allow many more samples to be analyzed. In conclusion, near- and mid-infrared spectroscopy have great potential for providing the C values needed for C sequestration studies.