Evidence and Mass Quantification of Atmospheric Microplastics in a Coastal New Zealand City.

This study investigated the atmospheric deposition of microplastics (MPs) in Auckland, New Zealand, from two sampling sites over a 9-week period. The sizes, morphologies, number counts, and mass concentrations of specific polymers were determined for airborne MPs using a combination of a Nile Red-assisted automated fluorescence microscopy technique in series with pyrolysis-gas chromatography-mass spectrometry (Pyr-GC/MS). This enabled a larger number of MPs to be analyzed from each sample compared to traditional spectroscopic techniques. Microplastic number concentrations increased exponentially with decreasing size. The results show the importance of using consistent methodologies and size cutoffs when comparing microplastic data between studies. Eight polymers were quantified in the atmospheric deposition samples, with polyethylene (PE), polycarbonate (PC), and poly(ethylene terephthalate) (PET) being the most commonly observed. The largest MP deposition rates at an urban rooftop correlated with winds originating from the marine environment with speeds between 15 and 20 m s-1, indicating that airborne MPs in coastal regions may originate from wave-breaking mechanisms. This study represents the first report of using Pyr-GC/MS to determine the chemical compositions and mass concentrations of atmospheric microplastics, along with corresponding data on their sizes, morphologies, and number counts.

Nitrosamine formation from the reaction of methamphetamine with gaseous nitrous acid.

Methamphetamine is the most commonly seized amphetamine-type stimulant (ATS) worldwide. Chemical residues associated with the use or manufacture of methamphetamine can persist in the air and surfaces in a property for over 5 years and potentially pose risks to the health and safety of the public. When a house is tested for contamination, the test focuses on the presence of surface methamphetamine residue; however, other hazardous chemicals may also be present, including methamphetamine precursors and reaction products. As little has been reported about the ageing of the methamphetamine inside dwellings, there is currently large uncertainty regarding its fate and/or degradation products in such environments. If the indoor reactivity of methamphetamine is similar to that of nicotine-derived third-hand smoke, the production of a carcinogenic nitrosamine is an expected result. Thus, this proof-of-concept study investigated the reaction of methamphetamine with the common gaseous indoor oxidant nitrous acid (HONO) and monitored the fate of the resulting reaction products in simulated laboratory experiments to further understand the potential health risks associated with contaminated properties. Surface methamphetamine residue was observed to decrease with an exponential decay with an upper limit of 2.38 ± 0.5 × 10-3  min-1 upon exposure to HONO gas (5.7 ppmv, 0.25 L min-1 ). N-nitrosomethamphetamine (NMA), a suspected human mutagen and carcinogen, was detected to have a steady-state formation over the sampling time frame, with a surface area concentration of 0.87 µg/100 cm2 , suggesting that the risks to public health for properties contaminated with methamphetamine may be currently underestimated.

The contribution of commercial fireworks to both local and personal air quality in Auckland, New Zealand.

Firework displays produce large amounts of particulate matter (PM), contributing to poor air quality in local areas. Since short-term exposure to particulate matter correlates with increased mortality risks, these celebrations may impact both human health and the environment. Little is known about the particulate matter produced from recreational fireworks, as most studies have focused on professional large-scale events. In New Zealand, it is common for consumer fireworks to be ignited within residential areas during the Guy Fawkes celebration around 5 November. To better understand the contribution of individual fireworks on local air quality, ambient PM10 sampling was conducted in the 10 days surrounding Guy Fawkes Day in Auckland, New Zealand. These data were supplemented with measurements of firework emissions from 11 different individual products, including smoke bombs, sparklers, and Roman candles. Filter sampling results indicated that personal fireworks can contribute to ground level ambient air quality during celebrations, increasing ambient PM10 concentrations by 21.6 µg m-3 over a 12-h sampling period. The use of personal fireworks can expose consumers to PM10 concentrations much higher, up to 9.51 mg m-3 from individual sparkler use under worst-case scenario assumptions. The inhalation of sparkler emissions for just 8 min can lead to an exposure to PM10 mass greater than that from daily recommended limits (50 µg m-3 exposure over 24 h). X-ray fluorescence (XRF) analysis indicated that potassium (K) and strontium (Sr) can be used as tracers for local firework use and that arsenic (As) may be an important contaminant during Guy Fawkes celebrations. The PM from personal fireworks contained large amounts of chlorine (Cl), which may be indicative of perchlorate oxidizers. In addition, lead (Pb) was observed in the PM generated from two of the colored sparklers, which were marketed as "safer" alternatives to more explosive firework products.

Biodegradable chelating agent improves the survival of early larvae for shellfish aquaculture.

The toxicity of heavy metals commonly impacts the survival of crustacean and bivalve larvae in hatchery culture, and this has led to the widespread use of EDTA to decrease this toxicity. Since EDTA has a very poor biodegradability leading to potential persistent environmental effects, alternative methods to prevent heavy metal toxicity to shellfish larvae are needed. EDDS is a biodegradable potential alternative to EDTA for this application and was tested as a treatment of the seawater used for rearing aquaculture Greenshell™ mussel (Perna canaliculus) larval embryos in this study. Mussel embryos reared with EDTA or EDDS had significantly better survival than without. The concentrations and spatial distributions of heavy metals in D-veliger larvae as determined by Inductively Coupled Plasma Mass Spectrometry (ICP-MS) and X-ray Fluorescence Microscopy (XFM) suggested that chelating agents increased the levels of calcium in larvae while they reduced the concentration of zinc. In addition, where decreased accumulation of the other heavy metals was not observed, chelating agents affected their distribution within the larvae, especially for copper and arsenic. This is the first study to test the use of EDDS for aquaculture hatchery application and shows that EDDS is an effective biodegradable alternative to EDTA that can mitigate the effects of heavy metals for shellfish larval rearing.

Examining the role of ethylenediaminetetraacetic acid (EDTA) in larval shellfish production in seawater contaminated with heavy metals.

Heavy metal pollution is a concern in many coastal locations where it is frequently deleterious to the survival of young shellfish. Consequently, a great number of commercial shellfish hatcheries around the world rely on the addition of ethylenediaminetetraacetic acid (EDTA) to seawater to ensure successful larval production. Despite the importance of this practice to global shellfish production the mode of action of EDTA in larval production remains undetermined. It is assumed EDTA chelates heavy metals in seawater preventing interference in larval development. Larval mussels (Perna canaliculus) raised in seawater with 3 µM EDTA had a 15 fold higher yield than those without EDTA. The concentration and spatial arrangement of heavy metals in larvae as determined by Inductively Coupled Plasma Mass Spectrometry (ICPMS) and X-ray Fluorescence Microscopy (XFM) was consistent with reduced bioavailability of several metals, especially copper and zinc. This is the first study to confirm the effectiveness of EDTA for managing metal pollution commonly encountered in coastal shellfish hatcheries.

A new analytical method to measure S-methyl-l-methionine in grape juice reveals the influence of yeast on dimethyl sulfide production during fermentation.

BACKGROUND: Dimethyl sulfide (DMS) is a small sulfur-containing impact odorant, imparting distinctive positive and / or negative characters to food and beverages. In white wine, the presence of DMS at perception threshold is considered to be a fault, contributing strong odors reminiscent of asparagus, cooked cabbage, and creamed corn. The source of DMS in wine has long been associated with S-methyl-l-methionine (SMM), a derivative of the amino acid methionine, which is thought to break down into DMS through chemical degradation, particularly during wine ageing. RESULTS: We developed and validated a new liquid chromatography-tandem mass spectrometry (LC-MS/MS) method with a stable isotope dilution assay (SIDA) to measure SMM in grape juice and wine. The application of this new method for quantitating SMM, followed by the quantitation of DMS using headspace-solid phase micro-extraction coupled with gas chromatography-mass spectrometry (HS-SPME/GC-MS), confirmed that DMS can be produced in wine via the chemical breakdown of SMM to DMS, with greater degradation observed at 28 °C than at 14 °C. Further investigation into the role of grape juice and yeast strain on DMS formation revealed that the DMS produced from three different Sauvignon blanc grape juices, either from the SMM naturally present or SMM spiked at 50 mmol L-1 , was modulated depending on each of the four strains of Saccharomyces cerevisiae wine yeast used for fermentation. CONCLUSION: This study confirms the existence of a chemical pathway to the formation of DMS and reveals a yeast-mediated mechanism towards the formation of DMS from SMM during alcoholic fermentation. © 2019 Society of Chemical Industry.

Potential for the Remediation of Methamphetamine Contamination Using Ozone.

The deposition of methamphetamine within indoor environments due to illegal activities can pose a health risk for occupants. Current cleaning techniques are costly and inefficient, calling for the development of alternative remediation methods. In addition, the fate of methamphetamine in indoor environments is largely unknown, negatively impacting our knowledge on the health risks associated with contaminated dwellings. Under the conditions of this study, 97% of surface deposited methamphetamine on a paper substrate was consumed after 12 min of exposure to ozone, thus demonstrating potential for its use as a remediation agent. The reaction had an effective second-order rate constant with an upper limit of 2.15 ± 1 × 10-18  cm3 /molecule/s, and the main product observed was phenyl-2-propanone (P2P) at 8.3% yield, as determined using GC/MS. Several products observed in this study have also been reported as by-products of methamphetamine synthesis, including P2P-a known methamphetamine precursor, which indicates that their detection at a potential clandestine site is not necessarily evidence of manufacture.

Hyperspectral and Color Imaging of Solvent Vapor Sorption Into Porous Silicon.

A porous silicon thin film photonic crystal (rugate) sample with both a radial gradient in the rugate reflectance band wavelength and two spatially separated pore-wall surface chemistries (methylated and oxidized) was monitored by hyperspectral and color imaging while it was dosed with vapors of acetone, ethanol, heptane, 2-propanol, and toluene at concentrations ranging from 100 to 3,000 mg m-3. The shift in the wavelength of the rugate reflectance band maximum at each position along a transect across the two surface chemistries, as derived from the hyperspectral imaging, could discriminate between the different solvents and concentrations of solvents, while the change in hue derived from the color camera data along an analogous transect did not provide discrimination. The discrimination between solvents was mainly due to the two different surface chemistries, and the gradient associated with the change in the rugate reflectance band wavelength did not affect the selectivity significantly. There was spatial variability in the spectral and color responses along the transect independent of the overall rugate reflectance band wavelength gradient and pore-wall surface chemistries, and this was attributed to factors such as the presence of striations in the silicon wafer from which the porous silicon was prepared.

Predicting effects on oxaliplatin clearance: in vitro, kinetic and clinical studies of calcium- and magnesium-mediated oxaliplatin degradation.

This study evaluated the impact of calcium and magnesium on the in vitro degradation and in vivo clearance of oxaliplatin. Intact oxaliplatin and Pt(DACH)Cl2 were measured in incubation solutions by HPLC-UV. A clinical study determined changes in plasma concentrations of calcium and magnesium in cancer patients and their impact on oxaliplatin clearance. Kinetic analyses modelled oxaliplatin degradation reactions in vitro and contributions to oxaliplatin clearance in vivo. Calcium and magnesium accelerated oxaliplatin degradation to Pt(DACH)Cl2 in chloride-containing solutions in vitro. Kinetic models based on calcium and magnesium binding to a monochloro-monooxalato ring-opened anionic oxaliplatin intermediate fitted the in vitro degradation time-course data. In cancer patients, calcium and magnesium plasma concentrations varied and were increased by giving calcium gluconate and magnesium sulfate infusions, but did not alter or correlate with oxaliplatin clearance. The intrinsic in vitro clearance of oxaliplatin attributed to chloride-, calcium- and magnesium-mediated degradation predicted contributions of <2.5% to the total in vivo clearance of oxaliplatin. In conclusion, calcium and magnesium accelerate the in vitro degradation of oxaliplatin by binding to a monochloro-monooxalato ring-opened anionic intermediate. Kinetic analysis of in vitro oxaliplatin stability data can be used for in vitro prediction of potential effects on oxaliplatin clearance in vivo.

Physicochemical studies on the copper(II) binding by glycated collagen telopeptides.

Emerging evidence indicates that levels of advanced glycation end-products (AGEs) correlate with age- and diabetes-related organ damage and may play a causative role in such damage. Increased chelation of Cu(II) ions appears to play an important role in this process, however, the precise relationship between formation of AGEs and accumulation of Cu(II) is yet to be determined. The interaction between AGEs and Cu(II) has been investigated using a collagenous peptide that has been site-specifically modified by a key AGE. Potentiometric titration showed that introduction of this AGE increased the capacity of the host-peptide to bind Cu(II). This result was confirmed by mass spectrometric characterisation of the AGE-modified peptide-Cu(II) system.

Monitoring of degradation of porous silicon photonic crystals using digital photography.

We report the monitoring of porous silicon (pSi) degradation in aqueous solutions using a consumer-grade digital camera. To facilitate optical monitoring, the pSi samples were prepared as one-dimensional photonic crystals (rugate filters) by electrochemical etching of highly doped p-type Si wafers using a periodic etch waveform. Two pSi formulations, representing chemistries relevant for self-reporting drug delivery applications, were tested: freshly etched pSi (fpSi) and fpSi coated with the biodegradable polymer chitosan (pSi-ch). Accelerated degradation of the samples in an ethanol-containing pH 10 aqueous basic buffer was monitored in situ by digital imaging with a consumer-grade digital camera with simultaneous optical reflectance spectrophotometric point measurements. As the nanostructured porous silicon matrix dissolved, a hypsochromic shift in the wavelength of the rugate reflectance peak resulted in visible color changes from red to green. While the H coordinate in the hue, saturation, and value (HSV) color space calculated using the as-acquired photographs was a good monitor of degradation at short times (t < 100 min), it was not a useful monitor of sample degradation at longer times since it was influenced by reflections of the broad spectral output of the lamp as well as from the narrow rugate reflectance band. A monotonic relationship was observed between the wavelength of the rugate reflectance peak and an H parameter value calculated from the average red-green-blue (RGB) values of each image by first independently normalizing each channel (R, G, and B) using their maximum and minimum value over the time course of the degradation process. Spectrophotometric measurements and digital image analysis using this H parameter gave consistent relative stabilities of the samples as fpSi > pSi-ch.

Thermally modulated porous silica multispectral filters and their application in remote imaging.

We report a thermally tunable multispectral imaging filter based on reversible condensation of volatile organic fluids within a nanoporous one-dimensional photonic crystal. The photonic crystal (optical rugate filter) comprises oxidized porous silicon, prepared by electrochemical etch of silicon and subsequent air oxidation (porous silica rugate filter, pSiF). The reflectance spectrum of the pSiF is designed and constructed to match two of the red emission bands of the luminescent complex europium(III) tris-dipicolinate, [Eu(dpa)3](3-), which has been used as an indicator for anthrax spores. When the pSiF is fitted with a thermoelectric Peltier cooler/heater and sealed in a container with 2-propanol vapor, microcapillary effects drive the temperature-dependent condensation/evaporation of 2-propanol into/out of the porous nanostructure. Thermal cycling experiments show that the wavelengths of the spectral bands of the pSiF are reversibly tuned by ±35 nm for a temperature change of ±40 °C. Difference images of a UV-illuminated scene containing the [Eu(dpa)3](3-) target, obtained by reflection from pSiF that is continuously thermally cycled through the emission bands of the dye, show that the target can be discriminated from the background or from control targets with overlapping but dissimilar luminescence spectra.

Ionic strength effects on silicic acid (H4SiO4) sorption and oligomerization on an iron oxide surface: an interesting interplay between electrostatic and chemical forces.

The effect of ionic strength on reactions at aqueous interfaces can provide insights into the nature of the chemistry involved. The adsorption of H(4)SiO(4) on iron oxides at low surface silicate concentration (Γ(Si)) forms monomeric silicate complexes with Fe-O-Si linkages, but as Γ(Si) increases silicate oligomers with Si-O-Si linkages become increasingly prevalent. In this paper, the effect of ionic strength (I) on both Γ(Si) and the extent of silicate oligomerization on the ferrihydrite surface is determined at pH 4, 7, and 10, where the surface is, respectively, positive, nearly neutral, and negatively charged. At pH 4, an increase in ionic strength causes Γ(Si) to decrease at a given H(4)SiO(4) solution concentration, while the proportion of oligomers on the surface at a given Γ(Si) increases. At pH 10, the opposite is observed; Γ(Si) increases as I increases, while the proportion of surface oligomers at a given Γ(Si) decreases. Ionic strength has only a small effect on the surface chemistry of H(4)SiO(4) at pH 7, but at low Γ(Si) this effect is in the direction observed at pH 4 while at high Γ(Si) the effect is in the direction observed at pH 10. The pH where the surface has zero charge decreases from ≈8 to 6 as Γ(Si) increases so that the surface potential (Ψ) is positive at pH 4 for all Γ(Si) and at pH 7 with low Γ(Si). Likewise, Ψ < 0 at pH 10 for all Γ(Si) and at pH 7 with high Γ(Si). The diffuse layer model is used to unravel the complex and subtle interactions between surface potential (Ψ) and chemical parameters that influence interfacial silicate chemistry. This analysis reveals that the decrease in the absolute value of Ψ as I increases causes Γ(Si) to decrease or increase where Ψ is, respectively, positive or negative. Therefore, at a given Γ(Si), the solution H(4)SiO(4) concentration changes with I, and because oligomerization has a higher H(4)SiO(4) stoichiometry coefficient than monomer adsorption, this results in the observed dependence of the extent of silicate oligomerization on I.

Preparation and characterization of pore-wall modification gradients generated on porous silicon photonic crystals using diazonium salts.

One-dimensional photonic crystals (rugate filters) constructed from porous silicon were modified by the chemical hydrosilylation of terminal alkenes (decyl, 10-carboxydecyl, and 10-hydroxydecyl) in the presence of a concentration gradient of diazonium salt initiators. The concentration gradient was generated by vertically orienting the Si wafer containing the porous Si layer in an alkene solution and then introducing the diazonium salt at the bottom edge of the wafer. Slow diffusion of the salt led to a varying density of grafted alkene across the surface of the porous layer. The modified surfaces were end-capped with methyl groups by electrochemical grafting to impart improved stability and greater hydrophobicity. The surface modified with 10-carboxydecyl species was ionized by deprotonation of the carboxy groups to increase the hydrophilicity of this porous silicon surface. The pore-wall modification gradients were characterized using attenuated total reflectance Fourier transform infrared spectroscopy (ATR-FTIR) and scanning electron microscopy (SEM) with energy-dispersive spectroscopy (EDS). The more hydrophilic portion of the gradient changes color when water infiltrates the porous nanostructure because of a shift in the stop band of the photonic crystal. The more hydrophobic portion of the gradient excludes water, although mixtures of water and ethanol will infiltrate this region, depending on the concentration of ethanol in the mixture. A simple visual sensor for small quantities of ethanol in water, capable of detecting ethanol concentrations of between 0 and 8% with a resolution of 1% is demonstrated.

Insights into H(4)SiO(4) surface chemistry on ferrihydrite suspensions from ATR-IR, Diffuse Layer Modeling and the adsorption enhancing effects of carbonate.

Silicic acid (H(4)SiO(4)) adsorbs at the ferrihydrite-water interface as monomeric or oligomeric surface silicate complexes.ATR-IR spectra were used to determine the proportions of monomeric and oligomeric surface silicate as a function of pH and Si surface concentrations (Γ(Si)) for H(4)SiO(4) in ferrihydrite suspensions.At each pH the proportion of adsorbed silicate present as monomers decreased as Γ(Si) increased while at a given Γ(Si) the proportion of adsorbed silicate present as monomers was higher at higher pH. ATR-IR spectra for ferrihydrite suspensions in combination with the adsorption isotherm data were used to calibrate the Diffuse Layer Model (DLM) to describe H(4)SiO(4) adsorption as monomers and oligomers on ferrihydrite surface sites (≡FeOH). Using a set of reactions that were consistent with the ATR-IR spectra the DLM could accurately describe the H(4)SiO(4) adsorption isotherms, the distribution of surface monomeric and oligomeric silicates, and the decrease in surface potential with Γ(Si).The reactions included the formation of monomeric complexes (≡FeH((3-n))SiO(4)((-n))) and trimeric silicate complexes formed between two surface sites(≡Fe(2)H((6-n))Si(3)O(10)((-n))). This oligomer stoichiometry is consistent with previous studies suggesting the surface silicate oligomer is formed by a solution H(4)SiO(4) bridging two adjacent adsorbed monomers to form a linear trimer. This study also showed that carbonate can enhance H(4)SiO(4) adsorption between pH 9 and 11. The data were consistent with formation of an outer-sphere complex between a solution H(3)SiO(4)(-) and a protonated adsorbed carbonate species which is analogous to the mechanism by which carbonate enhances the goethite adsorption of sulfate.

Electrochemical preparation of pore wall modification gradients across thin porous silicon layers.

Thin film porous silicon layers have been constructed in which the level of chemical modification to the pore walls is altered in a controlled gradient across the material. The gradient modification within such a nanoporous material represents a significant advance over gradients imposed across a flat surface. Gradients of methyl, pentyl acetate, and decyl groups are formed via electrochemical attachment of organohalides with an asymmetric electrode arrangement. The stability and hydrophobicity of the latter two systems have been improved through postprocess "end-capping" of the porous silicon with methyl groups. Two-dimensional mapping transmission FTIR microspectrophotometry and ATR-FTIR have been employed to characterize these new materials. Cleaving the surface-attached pentyl acetate groups to 5-hydroxypentyl groups leads to materials that can act as efficient visual indicators of the ethanol concentration in water over the range 1-10 vol %.

Recoveries of trace pseudoephedrine and methamphetamine residues from impermeable household surfaces: implications for sampling methods used during remediation of clandestine methamphetamine laboratories.

Evaluation of the risk posed by contaminants present during and after decontamination of clandestine methamphetamine laboratories requires a connection between the levels of contaminants measured and those actually present at the scene. The recoveries of pseudoephedrine and methamphetamine from glass, stainless steel, and a range of impermeable surfaces likely to be found in a clandestine laboratory were examined, using GC-MS of derivatized samples as the analytical method. When surfaces had been cleaned prior to drug deposition, wiping with water-dampened filter paper can recover 60-80% of pseudoephedrine immediately after deposition, and at least 50% of the pseudoephedrine still present on a surface after 2 days when deposited at a surface concentration of 2.5 microg/100 cm(2). Wiping with methanol-dampened filter paper could recover 60-90% of the methamphetamine immediately after deposition, and could recover at least 50-60% of the methamphetamine still present after 2 days when 0.6 microg/100 cm(2) was initially deposited on the surface. Recoveries were lower for surfaces that had not been pre-cleaned. Methamphetamine and pseudoephedrine showed significant volatility in both the free base and hydrochloride forms, with experiments in an enclosed format showing up to half the recovered drug being present on a glass plate held about 4mm above a substrate contaminated with one of the drugs at the above surface concentrations after 2 days. It is therefore important to remove any visible bulk contaminants and remove obvious pseudoephedrine or methamphetamine-contaminated surfaces prior to heating, ventilation or sealing of a clandestine laboratory to avoid redistribution of material around the site. A revised method for pseudoephedrine analysis was developed that could also detect the pseudoephedrine-formaldehyde adduct that can form from trace pseudoephedrine present at clandestine laboratories.

Silicic acid adsorption and oligomerization at the ferrihydrite-water interface: interpretation of ATR-IR spectra based on a model surface structure.

Oxide surfaces can promote specific lateral interactions between adsorbed species that become concentrated in specific orientations at an interface. In this article, in situ attenuated total reflectance (ATR) IR spectra were collected over time (from 0 to approximately 100 h) as the iron oxide ferrihydrite reacted with H(4)SiO(4) (between 0.007 and 1.65 mM) and at a pH of 4, 7, or 10. Under all conditions, the first product formed was a monomeric surface species with distinct bands at 945 and 880 cm(-1), and a bidentate (2)C complex with SiO(4) sharing corners with two edge-linked Fe octahedra was proposed. Once a certain surface concentration (Gamma(Si)) of monomers was reached, a condensed oligomeric surface species with Si-O-Si linkages was observed on the surface with bands at 1005, 917, and 827 cm(-1) and one or more bands at >1050 cm(-1). This species was observed as a minor surface component at Gamma(Si) that was up to 10 times lower than the calculated density of (2)C adsorption sites on ferrihydrite and became the dominant surface species at higher Gamma(Si). This formation of a specific oligomer is rationalized on the basis of a recent model for the ferrihydrite surface, with the arrangement of (2)C adsorption sites on the (021) ferrihydrite face causing adjacent Si monomers to be held in an orientation that is conducive to the formation of a condensed Si species upon insertion of a solution H(4)SiO(4). Therefore, this model predicts that the ferrihydrite surface may act as a template for oligomerization in one dimension forming segments of pyroxene-like structures. The ATR-IR spectra and changes in the surface species' composition with time are consistent with such a model.

Compositional data analysis for elemental data in forensic science.

Discrimination of material based on elemental composition was achieved within a compositional data (CoDa) analysis framework in a form appropriate for use in forensic science. The methods were carried out on example data from New Zealand nephrite. We have achieved good separation of the in situ outcrops of nephrite from within a well-defined area. The most significant achievement of working within the CoDa analysis framework is that the implications of the constraints on the data are acknowledged and dealt with, not ignored. The full composition was reduced based on collinearity of elements, principal components analysis (PCA) and scalings from a backwards linear discriminant analysis (LDA). Thus, a descriptive subcomposition was used for the final discrimination, using LDA, and proved to be more successful than using the full composition. The classification based on the LDA model showed a mean error rate of 2.9% when validated using a 10 repeat, three-fold cross-validation. The methods presented lend objectivity to the process of interpretation, rather than relying on subjective pattern matching type approaches.

Multiplexed DNA detection using spectrally encoded porous SiO2 photonic crystal particles.

A particle-based multiplexed DNA assay based on encoded porous SiO(2) photonic crystal disks is demonstrated. A "spectral barcode" is generated by electrochemical etch of a single-crystal silicon wafer using a programmed current-time waveform. A lithographic procedure is used to isolate cylindrical microparticles 25 microm in diameter and 10 microm thick, which are then oxidized, modified with a silane linker, and conjugated to various amino-functionalized oligonucleotide probes via cyanuric chloride. It is shown that the particles can be decoded based on their reflectivity spectra and that a multiple analyte assay can be performed in a single sample with a modified fluorescence microscope. The homogeneity of the reflectivity and fluorescence spectra, both within and across the microparticles, is also reported.