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2.
Environ Sci Pollut Res Int ; 31(27): 39514-39532, 2024 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-38822957

RESUMO

Decoupling of crop-livestock systems increases the risks of pollution, waste of nutrient resources, and biodiversity loss. Crop-livestock integration (CLI) is an effective solution to these problems, and motivating farmers to adopt CLI is the key. Many countries have implemented environmental regulations (ER) aiming to influence farmers' CLI adoption decisions. Based on a field study of 316 hog farmers from Shaanxi Province of China, this paper applies the triple-hurdle model to empirically examine the impacts of economic expectations (EE) and ER on CLI adoption decisions. It also verifies the income effect of CLI. The results are as follows: 90.5% of farmers are willing to adopt CLI, but the adoption rate is only 40.8% and the average integration degree is only 0.236; CLI not been widely popularized. EE and ER promote farmers' CLI adoption significantly, while the impact of interaction between EE and ER on CLI adoption differs. IER weakens the positive impact of EE on farmers' CLI integration degree, which has a "crowding out effect." GER negatively moderates the impact of EE on farmers' adoption willingness of CLI. CER strengthens the positive effect of EE on farmers' adoption behavior and CLI integration degree. CLI increases the farmers' income. These results contribute to our understanding of the mechanisms of CLI adoption decisions and sustainable policy optimization for green agricultural development.


Assuntos
Fazendeiros , China , Animais , Produtos Agrícolas , Gado , Agricultura , Humanos
3.
Sci Data ; 11(1): 212, 2024 Feb 16.
Artigo em Inglês | MEDLINE | ID: mdl-38365866

RESUMO

With the emergence of technology and the usage of a large number of smart devices, cyber threats are increasing. Therefore, research studies have shifted their attention to detecting Android malware in recent years. As a result, a reliable and large-scale malware dataset is essential to build effective malware classifiers. In this paper, we have created AndroDex: an Android malware dataset containing a total of 24,746 samples that belong to more than 180 malware families. These samples are based on .dex images that truly reflect the characteristics of malware. To construct this dataset, we first downloaded the APKs of the malware, applied obfuscation techniques, and then converted them into images. We believe this dataset will significantly enhance a series of research studies, including Android malware detection and classification, and it will also boost deep learning classification efforts, among others. The main objective of creating images based on the Android dataset is to help other malware researchers better understand how malware works. Additionally, an important result of this study is that most malware nowadays employs obfuscation techniques to hide their malicious activities. However, malware images can overcome such issues. The main limitation of this dataset is that it contains images based on .dex files that are based on static analysis. However, dynamic analysis takes time, therefore, to overcome the issue of time and space this dataset can be used for the initial examination of any .apk files.

4.
Plants (Basel) ; 12(19)2023 Oct 08.
Artigo em Inglês | MEDLINE | ID: mdl-37836243

RESUMO

Zucchini yellow mosaic virus (ZYMV) is a severe threat to cucurbit crops worldwide, including Pakistan. This study was pursued to evaluate the prevalence, geographic distribution, and molecular diversity of ZYMV isolates infecting cucurbits in Pakistan's Pothwar region. Almost all the plant viruses act as a biotic stress on the host plants, which results in a yield loss. These viruses cause losses in single-infection or in mixed-infection cucurbit crops, and we have found a number of mixed-infected samples belonging to the Curubitaceae family. Serological detection of the tested potyviruses in the collected cucurbit samples revealed that ZYMV was the most prevalent virus, with a disease incidence (DI) at 35.2%, followed by Papaya ringspot virus (PRSV) with an incidence of 2.2%, and Watermelon mosaic virus (WMV) having an incidence as little as 0.5% in 2016. In the year 2017, a relatively higher disease incidence of 39.7%, 2.4%, and 0.3% for ZYMV, WMV, and PRSV, respectively, was recorded. ZYMV was the most prevalent virus with the highest incidence in Attock, Rawalpindi, and Islamabad, while PRSV was observed to be the highest in Islamabad and Jhelum. WMV infection was observed only in Rawalpindi and Chakwal. Newly detected Pakistani ZYMV isolates shared 95.8-97.0% nucleotide identities among themselves and 77.1-97.8% with other isolates retrieved from GenBank. Phylogenetic relationships obtained using different ZYMV isolates retrieved from GenBank and validated by in silico restriction analysis revealed that four Pakistani isolates clustered with other ZYMV isolates in group IIb with Chinese, Italian, Polish, and French isolates, while another isolate (MK848239) formed a separate minor clade within IIb. The isolate MK8482490, reported to infect bitter gourd in Pakistan, shared a minor clade with a Chinese isolate (KX884570). Recombination analysis revealed that the recently found ZYMV isolate (MK848239) is most likely a recombinant of Pakistani (MK848237) and Italian (MK956829) isolates, with a recombinant breakpoint between 266 and 814 nucleotide positions. Local isolate comparison and recombination detection may aid in the development of a breeding program that identifies resistant sources against recombinant isolates because the ZYMV is prevalent in a few cucurbit species grown in the surveyed areas and causes heavy losses and economic damage to the agricultural community.

5.
Heliyon ; 9(9): e19557, 2023 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-37681162

RESUMO

In this review paper, the anti-surge control (ASC) of the compressors and fault-tolerant control (FTC) systems are described from the perspective of integration for reliability enhancement against faults in the system components. It explains the phenomenon of a surge in the compressors, surge precursors, and the potential damage caused by this surge. The explanation of surge avoidance methods in compressors incorporated with modern surge control systems is described along with their applications. The sizing of the system components and valves, particularly methodologies for appropriately estimating acceptable upstream pipe sizes, are elaborated. The existing surge protection techniques for compressors are analyzed to highlight the advantages and disadvantages and from a future perspective, new approaches for detecting system changes and surges, are included. In the end, the concept of fault tolerance and its advanced applications concerning the anti-surge control for compressors are explained. This study contributes to the young researchers in the field of anti-surge control systems for compressors with the integration of fault tolerance to increase the reliability of the system.

6.
Chemosphere ; 342: 140193, 2023 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-37722537

RESUMO

Heavy metals contamination is posing severe threat to the soil health and environmental sustainability. Application of industrial and sewage waste as irrigation and growing urbanization and agricultural industry is the main reason for heavy metals pollution. Therefore, the present study was planned to assess the influence of different irrigation sources such as industrial effluents, sewage wastewater, tube well water, and canal water on the soil physio-chemical, soil biological, and enzymatic characteristics. Results showed that sewage waste and industrial effluents affect the soil pH, organic matter, total organic carbon, and cation exchange capacity. The highest total nickel (383.71 mg kg-1), lead (312.46 mg kg-1), cadmium (147.75 mg kg-1), and chromium (163.64 mg kg-1) were recorded with industrial effluents application. Whereas, industrial effluent greatly reduced the soil microbial biomass carbon (SMB-C), soil microbial biomass nitrogen (SMB-N), soil microbial biomass phosphorus (SMB-P), and soil microbial biomass sulphur (SMB-S) in the winter season at sowing time. Industrial effluent and sewage waste inhibited the soil enzymes activities. For instance, the minimum activity of amidase, urease, alkaline-phosphatase, ß-glucosidase, arylsulphatase and dehydrogenase activity was noted with HMs contamination. The higher levels of metals accumulation was observed in vegetables grown in soil contaminated with untreated waste water and industrial effluent in comparison to soil irrigated with canal and tube well water. The mean increase in soil microbial parameters and enzyme activities was also observed in response to the change in season from winter to spring due to increase in soil mean temperature. The SMB-C, SMB-N, SMB-P and SMB-S showed significant positive correlation with soil enzymes (amidase, urease, alkaline-phosphatase, ß-glucosidase, arylsulphatase and dehydrogenase). The heavy metals accumulation in soil is toxic to microorganisms and inhibits enzyme functions critical for nutrient cycling and organic matter decomposition and can disrupt the delicate balance of soil ecosystem and may lead to long-term damage of soil biological health.

7.
Pest Manag Sci ; 79(1): 336-348, 2023 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-36153706

RESUMO

BACKGROUND: Bacillus species synthesize antifungal lipopeptides (LPs) making them a sustainable and eco-friendly management option to combat Fusarium wilt of chickpea. RESULTS: In this study, 18 endophytic Bacillus strains were assessed for their antifungal activity against Fusarium oxysporum f. sp. ciceris (FOC) associated with Fusarium wilt of chickpea. Among them, 13 strains produced significant inhibition zones in a direct antifungal assay while five strains failed to produce the inhibition of FOC. Bacillus thuringiensis CHGP12 exhibited the highest inhibition 3.45 cm of FOC. The LPs extracted from CHGP12 showed significant inhibition of the pathogen. Liquid chromatography-mass spectrometry (LC-MS) analysis confirmed that CHGP12 possessed the ability to produce fengycin, surfactin, iturin, bacillaene, bacillibactin, plantazolicin, and bacilysin. In an in vitro qualitative assay CHGP12 exhibited the ability to produce lipase, amylase, cellulase, protease, siderophores, and indole 3-acetic acid (IAA). IAA and gibberellic acid (GA) were quantified using ultra-performance liquid chromatography (UPLC) with 370 and 770 ng mL-1 concentrations of IAA and GA respectively. Furthermore, the disease severity showed a 40% decrease over control in CHGP12 treated plants compared to the control in a glasshouse experiment. Moreover, CHGP12 also exhibited a significant increase in total biomass of the plants namely, root and shoot growth parameters, stomatal conductance, and photosynthesis rate. CONCLUSION: In conclusion, our findings suggest that B. thuringiensis CHGP12 is a promising strain with high antagonistic and growth-promoting potential against Fusarium wilt of chickpea. © 2022 Society of Chemical Industry.


Assuntos
Bacillus thuringiensis , Cicer , Fusarium , Bacillus thuringiensis/metabolismo , Cicer/crescimento & desenvolvimento , Cicer/microbiologia , Fusarium/patogenicidade , Doenças das Plantas/microbiologia , Doenças das Plantas/prevenção & controle
8.
Viruses ; 14(11)2022 11 09.
Artigo em Inglês | MEDLINE | ID: mdl-36366579

RESUMO

Southern tomato amalgavirus (STV) is a cryptic pathogen that is abundant in tomato production fields and intensifies the resurgence of tomato yellow stunt disease (ToYSD), together with other phytoviruses. Here, we mapped the geographical and genomic diversity, phylogenetics, and evolutionary dynamics of STV. We found that STV prevailed across China and Pakistan, with a maximum average rate of infection of 43.19% in Beijing, China, and 40.08% in Punjab, Pakistan. Subsequently, we amplified, cloned, and annotated the complete genome sequences of STV isolates from Solanum lycopersicum L. in China (OP548653 and OP548652) and Pakistan (MT066231) using Sanger and next-generation sequencing (NGS). These STV isolates displayed close evolutionary relationships with others from Asia, America, and Europe. Whole-genome-based molecular diversity analysis showed that STV populations had 33 haplotypes with a gene diversity (Hd) of 0.977 and a nucleotide diversity (π) of 0.00404. The genetic variability of RNA-dependent RNA-polymerase (RdRp) was higher than that of the putative coat protein (CP) p42. Further analysis revealed that STV isolates were likely to be recombinant but with a lower-to-moderate level of confidence. With a variable distribution pattern of positively and negatively selected sites, negative selection pressure predominantly acted on p42 and RdRp. These findings elaborated on the molecular variability and evolutionary trends among STV populations across major tomato-producing regions of the world.


Assuntos
Vírus de RNA , Solanum lycopersicum , Vírus de RNA/genética , Genômica , RNA Polimerase Dependente de RNA , RNA , Paquistão
9.
Plant Dis ; 2022 Oct 24.
Artigo em Inglês | MEDLINE | ID: mdl-36281019

RESUMO

Bitter gourd (Momordica charantia L.) is an important vegetable crop of the Cucurbitaceae family widely cultivated in Pakistan and around the world. In October 2020, a nutrition management trial of Bitter gourd cv. Seminis-200) was conducted on an area of 10,860 sq. ft. (99×110 feet) at the Agricultural Research farm of Bahauddin Zakariya University, Multan (30.2601° N, 71.5158° E), Pakistan. Symptoms of large, brown necrotic leaf spots were observed on the leaves of bitter gourd vines. The disease started from the yellowing of leaves within the reticulate venation and turned brown. Irregular brown leaf spots coalesced to form large necrotic areas followed by foliar chlorosis then wilting that occurred very late. There were no crown rot symptoms although there was slight discoloration of roots and when cut longitudinally, browning of tissues was observed. The disease was assessed visually with 37% incidence which resulted in poor quality and yield in terms of reduced size and yellowing of fruit. Infected vines along with the roots were collected for the isolation of pathogen. A total of 34 leaves and 22 root samples were collected from the field for isolation. The leaf, collar and root portions were cut into 0.5 to 1 cm in length and surface disinfected with 1% sodium hypochlorite (NaOCl) for 2-3 minutes followed by washing twice with autoclaved distilled water and after drying, placed on potato dextrose agar (PDA) medium, and incubated at 25±2 °C for one week. The fungal colonies of fluffy white growth with light orange pigment were isolated. For morphological characterization, a total of 4 pure cultures were isolated from leaves, collar region and root by single spore technique on carnation leaf agar (CLA) medium after 15 days of incubation at 25±2℃. Curved and thick-walled macroconidia with elongated or pointed apical characteristic foot-shaped basal cells were produced in sporodochia. Macroconidia with 5-7 septa measured 22.50-41.80 µm × 2.90-4.20 µm (n = 60). Thick, brown with roughened walls and subglobose ellipsoidal chlamydospores were observed in clumps or chains with the dimension of 5.8 to 10.8 µm (n = 20). On morphological characteristics, the fungus was identified as Fusarium equiseti (Corda) Sacc. according to Leslie and Summerell (2006). Two single spore isolates were used for molecular identification by amplifying ribosomal DNA of the internal transcribed spacer (ITS) region with ITS1/ITS4 primers (White et al. 1990) and for ß-tubulin gene region, primers T1/Bt-2b (O'Donnell and Cigelnik, 1997) were used. The obtained sequences were deposited in GenBank with accession numbers MW880179 and MW880198 from the ITS region and BLAST search in GenBank showed 100 and 98.11% alignment with previously published sequences of F. equiseti with accessions OM992323.1and MT558569.1 respectively. Accession number OM867571from the ß-tubulin region showed 100% sequence similarity with F. equiseti with accession MN653163.1. For pathogenicity, macroconidia from 2-week-old cultures on CLA medium were harvested to prepare spore suspension (1 × 106 conidia/ml). Koch's postulates were confirmed on nine bitter gourd plants (cv. Seminis-200) by applying spore suspension of fungal inoculum at 3-4 leaf stage separately on leaves by automizer, on collar region after making incision spore suspension was applied and in the root zone, 20ml spore suspension was added whereas distilled water was used as a control with three replications. Plants were kept under controlled conditions in the greenhouse with 65% to 75% humidity and the temperature was maintained at 32±2 °C for one week. After 7-8 days, inoculated plants began to exhibit symptoms of brown, necrotic leaf spots on the leaves of bitter gourd vines followed by yellowing of leaves that eventually turned brown. Roots showed slight discoloration and browning of vascular bundles and finally, the plants wilted after four weeks. while control plants remained symptomless. The symptoms resembled those noticed in the field. The fungus was re-isolated from leaves, collar region and roots, followed by morphological identification, and finally confirmed as F. equiseti. To the best of our knowledge, this is the first report of a leaf spot caused by F. equiseti in a bitter gourd from Pakistan. If the disease is not managed properly, it may cause a drastic effect on yield under favorable environmental conditions. The pathogen may also damage other cucurbitaceous crops cultivated in the area.

10.
Mol Biol Rep ; 49(12): 11433-11441, 2022 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-36002656

RESUMO

BACKGROUND: Citrus plants are prone to infection by different viroids which deteriorate their vigor and production. Citrus viroid V (CVd-V) is among the six citrus viroids, belongs to genus Apscaviroid (family Pospiviroidae) which induces symptoms of mild necrotic lesions on branches and cracks on trunk portion. METHODS AND RESULTS: A survey was conducted to evaluate the prevalence of CVd-V in core and non-core citrus cultivated areas of Punjab, Pakistan. A total of 154 samples from different citrus cultivars were tested for CVd-V infection by RT-PCR. The results revealed 66.66% disease incidence of CVd-V. Citrus cultivars Palestinia Sweet lime, Roy Ruby, Olinda Valencia, Kaghzi lime, and Dancy were identified as new citrus hosts of CVd-V for the first time from Pakistan. The viroid infection was confirmed by biological indexing on indicator host Etrog citron. The reported primers used for the detection of CVd-V did not amplify, rather showed non-specific amplification, which led to the designing of new primers. Whereas, new back-to-back designed primers (CVd-V AF1/CVd-V AR1) detected CVd-V successfully and obtained an expected amplified product of CVd-V with 294 bp. Sequencing analysis confirmed the new host of CVd-V showing 98-100% nucleotide sequence homology with those reported previously from other countries while 100% sequence homology to the isolates reported from Pakistan. Based on phylogenetic analysis using all CVd-V sequences in GenBank, two main CVd-V groups (I and II) were identified, and newly identified isolates during this study fall in the group I. CONCLUSION: The study revealed that there are some changes in the nucleotide sequences of CVd-V which made difficult for their detection using reported primers. All isolates of Pakistan showed high sequence homology with other isolates of CVd-V from Iran and USA whereas; the isolates from China, Japan, Tunisia, and Africa are distantly related. It is evident that CVd-V is spreading in all citrus cultivars in Pakistan.


Assuntos
Citrus , Viroides , Citrus/virologia , Paquistão , Filogenia , Doenças das Plantas , Tunísia , Viroides/genética
11.
Sensors (Basel) ; 22(10)2022 May 19.
Artigo em Inglês | MEDLINE | ID: mdl-35632272

RESUMO

Faults frequently occur in the sensors and actuators of process machines to cause shutdown and process interruption, thereby creating costly production loss. centrifugal compressors (CCs) are the most used equipment in process industries such as oil and gas, petrochemicals, and fertilizers. A compressor control system called an anti-surge control (ASC) system based on many critical sensors and actuators is used for the safe operation of CCs. In this paper, an advanced active fault-tolerant control system (AFTCS) has been proposed for sensor and actuator faults of the anti-surge control system of a centrifugal compressor. The AFTCS has been built with a dedicated fault detection and isolation (FDI) unit to detect and isolate the faulty part as well as replace the faulty value with the virtual redundant value from the observer model running in parallel with the other healthy sensors. The analytical redundancy is developed from the mathematical modeling of the sensors to provide estimated values to the controller in case the actual sensor fails. Dual hardware redundancy has been proposed for the anti-surge valve (ASV). The simulation results of the proposed Fault-tolerant control (FTC) for the ASC system in the experimentally validated CC HYSYS model reveal that the system continued to operate in the event of faults in the sensors and actuators maintaining system stability. The proposed FTC for the ASC system is novel in the literature and significant for the process industries to design a highly reliable compressor control system that would continue operation despite faults in the sensors and actuators, hence preventing costly production loss.

12.
PLoS One ; 17(3): e0264481, 2022.
Artigo em Inglês | MEDLINE | ID: mdl-35239700

RESUMO

Topic models extract latent concepts from texts in the form of topics. Lifelong topic models extend topic models by learning topics continuously based on accumulated knowledge from the past which is updated continuously as new information becomes available. Hierarchical topic modeling extends topic modeling by extracting topics and organizing them into a hierarchical structure. In this study, we combine the two and introduce hierarchical lifelong topic models. Hierarchical lifelong topic models not only allow to examine the topics at different levels of granularity but also allows to continuously adjust the granularity of the topics as more information becomes available. A fundamental issue in hierarchical lifelong topic modeling is the extraction of rules that are used to preserve the hierarchical structural information among the rules and will continuously update based on new information. To address this issue, we introduce a network communities based rule mining approach for hierarchical lifelong topic models (NHLTM). The proposed approach extracts hierarchical structural information among the rules by representing textual documents as graphs and analyzing the underlying communities in the graph. Experimental results indicate improvement of the hierarchical topic structures in terms of topic coherence that increases from general to specific topics.

13.
Sensors (Basel) ; 22(4)2022 Feb 17.
Artigo em Inglês | MEDLINE | ID: mdl-35214481

RESUMO

With the new advancements in Internet of Things (IoT) and its applications in different sectors, such as the industrial sector, by connecting billions of devices and instruments, IoT has evolved as a new paradigm known as the Industrial Internet of Things (IIoT). Nonetheless, its benefits and applications have been approved in different areas, but there are possibilities for various cyberattacks because of its extensive connectivity and diverse nature. Such attacks result in financial loss and data breaches, which urge a consequential need to secure IIoT infrastructure. To combat the threats in the IIoT environment, we proposed a deep-learning SDN-enabled intelligent framework. A hybrid classifier is used for threat detection purposes, i.e., Cu-LSTMGRU + Cu-BLSTM. The proposed model achieved a better detection accuracy with low false-positive rate. We have conducted 10-fold cross-validation to show the unbiasdness of the results. The proposed scheme results are compared with Cu-DNNLSTM and Cu-DNNGRU classifiers, which were tested and trained on the same dataset. We have further compared the proposed model with other existing standard classifiers for a thorough performance evaluation. Results achieved by our proposed scheme are impressive with respect to speed efficiency, F1 score, accuracy, precision, and other evaluation metrics.


Assuntos
Internet das Coisas , Benchmarking , Meio Ambiente , Indústrias , Inteligência
14.
Viruses ; 14(2)2022 01 18.
Artigo em Inglês | MEDLINE | ID: mdl-35215763

RESUMO

Plants in nature are under the persistent intimidation of severe microbial diseases, threatening a sustainable food production system. Plant-bacterial pathogens are a major concern in the contemporary era, resulting in reduced plant growth and productivity. Plant antibiotics and chemical-based bactericides have been extensively used to evade plant bacterial diseases. To counteract this pressure, bacteria have evolved an array of resistance mechanisms, including innate and adaptive immune systems. The emergence of resistant bacteria and detrimental consequences of antimicrobial compounds on the environment and human health, accentuates the development of an alternative disease evacuation strategy. The phage cocktail therapy is a multidimensional approach effectively employed for the biocontrol of diverse resistant bacterial infections without affecting the fauna and flora. Phages engage a diverse set of counter defense strategies to undermine wide-ranging anti-phage defense mechanisms of bacterial pathogens. Microbial ecology, evolution, and dynamics of the interactions between phage and plant-bacterial pathogens lead to the engineering of robust phage cocktail therapeutics for the mitigation of devastating phytobacterial diseases. In this review, we highlight the concrete and fundamental determinants in the development and application of phage cocktails and their underlying mechanism, combating resistant plant-bacterial pathogens. Additionally, we provide recent advances in the use of phage cocktail therapy against phytobacteria for the biocontrol of devastating plant diseases.


Assuntos
Antibacterianos/farmacologia , Bactérias/virologia , Bacteriófagos/fisiologia , Agentes de Controle Biológico/farmacologia , Terapia por Fagos , Doenças das Plantas/prevenção & controle , Plantas/microbiologia , Bactérias/efeitos dos fármacos , Resistência à Doença , Interações Hospedeiro-Patógeno , Doenças das Plantas/microbiologia , Plantas/imunologia
15.
Postgrad Med J ; 98(1162): 572-574, 2022 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-33452146

RESUMO

Diversification of academic medicine improves healthcare standards and patient outcomes. Gender and racial inequalities are major challenges faced by the healthcare system. This article reviews the trends of gender and racial disparity among residents of neurology. This retrospective analysis of the annual Accreditation Council for Graduate Medical Education Data Resource Books encompassed all residents at US neurology residency training programmes from the year 2007 to 2018. The representation of women steadily increased, with an absolute increase of 3% from the year 2007 to 2018. Although the absolute change (%) increased for the White race, Asian/Pacific Islander, Black/African Americans, there was a decrease seen in the Hispanic representation in neurology residents from the year 2011 to 2018. There was no change seen for the Native Americans/Alaskans. Our study concluded that gender and racial disparity persists in the recruitment of residents in neurology. This study highlights the need for targeted interventions to address gender and racial disparity among residents of neurology. Further studies are needed to explore etiological factors to address gender and racial disparity.


Assuntos
Negro ou Afro-Americano , Neurologia , Feminino , Hispânico ou Latino , Humanos , Grupos Raciais , Estudos Retrospectivos , Estados Unidos/epidemiologia
16.
Front Genet ; 13: 1104635, 2022.
Artigo em Inglês | MEDLINE | ID: mdl-36712883

RESUMO

Citrus viroid infection is emerging as a serious threat because of its efficient systemic movement within the host plant and its quick spread due to contaminated pruning tools. A survey was conducted to investigate the primary distribution and molecular characterization of Citrus bent leaf viroid (CBLVd) and its variants in different citrus cultivars. A total of 154 symptomatic citrus samples were collected and detected by RT‒PCR with newly designed specific primers with the incidence of 36.33%. During biological indexing study on Etrog citron, expressions of reduced leaf size, yellowing with a light green pattern, and bending were observed. Amplified products were sequenced and analyzed using a nucleotide BLAST search, which showed 98% homology with other CBLVd isolates. The results of the phylogenetic tree analysis showed the presence of two main groups (A and B), with the predominant variants of CBLVd, i.e., CVd-I-LSS (Citrus viroid Low Sequence Similarity) sequences, clustering in subgroup A1 along with newly detected CVd-I-LSS from Palestinian sweet lime (Citrus limettioides), which has been identified as a new host of CVd-I-LSS in Pakistan. Further analysis of the sequences in subgroup A1 showed that the variant of CVd-I-LSS infecting citrus cultivars had a close relationship with isolates reported from China, Japan, and Iran, which may have resulted from the exchange of planting material. This study also unveiled the variability in nucleotide sequences of CBLVd, which made it unable to be detected by old primers. The results of this study indicate that the widespread presence of divergent variants of CBLVd is a major concern for the citrus industry in Pakistan and other countries where virulent isolates of CBLVd are prevalent. These findings suggest the need for future research on effective management and quarantine measures to stop the spread of CBLVd.

17.
Front Microbiol ; 13: 1022016, 2022.
Artigo em Inglês | MEDLINE | ID: mdl-36590416

RESUMO

Potato leafroll virus (PLRV) is a widespread and one of the most damaging viral pathogens causing significant quantitative and qualitative losses in potato worldwide. The current knowledge of the geographical distribution, standing genetic diversity and the evolutionary patterns existing among global PLRV populations is limited. Here, we employed several bioinformatics tools and comprehensively analyzed the diversity, genomic variability, and the dynamics of key evolutionary factors governing the global spread of this viral pathogen. To date, a total of 84 full-genomic sequences of PLRV isolates have been reported from 22 countries with most genomes documented from Kenya. Among all PLRV-encoded major proteins, RTD and P0 displayed the highest level of nucleotide variability. The highest percentage of mutations were associated with RTD (38.81%) and P1 (31.66%) in the coding sequences. We detected a total of 10 significantly supported recombination events while the most frequently detected ones were associated with PLRV genome sequences reported from Kenya. Notably, the distribution patterns of recombination breakpoints across different genomic regions of PLRV isolates remained variable. Further analysis revealed that with exception of a few positively selected codons, a major part of the PLRV genome is evolving under strong purifying selection. Protein disorder prediction analysis revealed that CP-RTD had the highest percentage (48%) of disordered amino acids and the majority (27%) of disordered residues were positioned at the C-terminus. These findings will extend our current knowledge of the PLRV geographical prevalence, genetic diversity, and evolutionary factors that are presumably shaping the global spread and successful adaptation of PLRV as a destructive potato pathogen to geographically isolated regions of the world.

18.
Sensors (Basel) ; 21(14)2021 Jul 18.
Artigo em Inglês | MEDLINE | ID: mdl-34300623

RESUMO

The Internet of Things (IoT) has emerged as a new technological world connecting billions of devices. Despite providing several benefits, the heterogeneous nature and the extensive connectivity of the devices make it a target of different cyberattacks that result in data breach and financial loss. There is a severe need to secure the IoT environment from such attacks. In this paper, an SDN-enabled deep-learning-driven framework is proposed for threats detection in an IoT environment. The state-of-the-art Cuda-deep neural network, gated recurrent unit (Cu- DNNGRU), and Cuda-bidirectional long short-term memory (Cu-BLSTM) classifiers are adopted for effective threat detection. We have performed 10 folds cross-validation to show the unbiasedness of results. The up-to-date publicly available CICIDS2018 data set is introduced to train our hybrid model. The achieved accuracy of the proposed scheme is 99.87%, with a recall of 99.96%. Furthermore, we compare the proposed hybrid model with Cuda-Gated Recurrent Unit, Long short term memory (Cu-GRULSTM) and Cuda-Deep Neural Network, Long short term memory (Cu- DNNLSTM), as well as with existing benchmark classifiers. Our proposed mechanism achieves impressive results in terms of accuracy, F1-score, precision, speed efficiency, and other evaluation metrics.


Assuntos
Aprendizado Profundo , Internet das Coisas , Benchmarking , Comunicação , Redes Neurais de Computação
19.
J Pak Med Assoc ; 71(12): 2817-2819, 2021 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-35150546

RESUMO

The artery of Percheron is a rare variant of the posterior cerebral circulation. It is characterised by a single arterial trunk that supplies blood to bilateral paramedian thalami and rostral midbrain. Its occlusion can have a very wide range of presentation, and initial imaging including CT of the head maybe normal. Diagnosis and eventual treatment is usually delayed. We describe the case of an elderly man who presented with loss of consciousness, aphasia, and bilateral lower limb weakness. He was diagnosed with bilateral thalamic infarction due to the occlusion of the artery of Percheron only after an MRI of the brain was performed. Despite treatment his symptoms did not resolve completely.


Assuntos
Artérias , Infarto Cerebral , Idoso , Infarto Cerebral/diagnóstico por imagem , Infarto Cerebral/etiologia , Humanos , Imageamento por Ressonância Magnética , Masculino , Mesencéfalo , Tálamo/diagnóstico por imagem
20.
BMJ Case Rep ; 20182018 Aug 16.
Artigo em Inglês | MEDLINE | ID: mdl-30115713

RESUMO

Cerebral air embolism (CAE) is a rare, avoidable and potentially fatal iatrogenic complication. Here, we report a case of CAE associated with a central venous catheter in the internal jugular vein that resulted in neurological deficits and generalised epileptic seizures. A 64-year-old man admitted for fasciotomy for compartment syndrome developed CAE with left-sided neurological deficits. The suspected origin was retrograde air flow from the right internal jugular venous catheter. The air spontaneously resorbed without the need for specific therapy, and he made a good recovery. CAE is an infrequent iatrogenic complication that requires prompt diagnosis to avoid significant morbidity and mortality. This case serves as a timely reminder that adverse outcome such as stroke, seizures or death can be avoided by a high index of suspicion and prompt diagnosis. Hyperbaric oxygen is the prime therapeutic measure, but high-quality evidence on its clinical value is lacking.


Assuntos
Cateterismo Venoso Central/efeitos adversos , Cateteres Venosos Centrais/efeitos adversos , Embolia Aérea/etiologia , Embolia Intracraniana/etiologia , Cateterismo Venoso Central/métodos , Embolia Aérea/diagnóstico por imagem , Humanos , Veias Jugulares/diagnóstico por imagem , Veias Jugulares/lesões , Imageamento por Ressonância Magnética , Masculino , Pessoa de Meia-Idade , Tomografia Computadorizada por Raios X
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