What would you do? Managing a metro network during mass crowd events.

Major public events, such as sporting events, carnivals and festivals, are common occurrences in urban and city environments. They are characterised by the mass movement of people in relatively small areas, far in excess of normal daily activity. This section reviews how different metro systems across the globe respond to such peaks of activity, ensuring that people are moved swiftly, efficiently and safely. To this end, representatives from four major public metro systems (London, Hong Kong, Rio de Janeiro and São Paulo) describe how their respective metro systems respond to the capacity demands of a major annual event.

Intensities of calcium dipicolinate and Bacillus subtilis spore Raman spectra excited with 244 nm light.

Ultraviolet (UV) resonance Raman spectra of Bacillus subtilis endospores have been excited at 244 nm. Spectra can be interpreted in terms of contributions from calcium dipicolinate and nucleic acid components. Differences between spectra of spores and vegetative cells are very large and are due to the dominance of the dipicolinate features in the spore spectra. Because the DNA and RNA composition of B. subtilis spores is known and because the cross-sections of Raman bands belonging to DNA and RNA bases are known, it is possible to calculate resonance Raman spectral cross-sections for the spore Raman peaks associated with the nucleic acids. The cross-sections of peaks associated with calcium dipicolinate have been measured from aqueous solutions. Cross-section values of the dominant 1017 cm(-1) calcium dipicolinate peak measured from the Bacillus spores have been shown to be consistent with a calcium dipicolinate composition of ten percent or less by weight in the spores. It is suggested that spectral cross-sections of endospores excited at 244 nm can be estimated to be the sum of the cross-sections of the calcium dipicolinate, DNA, and RNA components of the spore. It appears that the peaks due to DNA and RNA can be used as an internal standard in the calculation of spore Raman peak cross-sections, and potentially the amount of calcium dipicolinate in spores. It is estimated on the basis of known nucleic acid base cross-sections that the most intense Raman band of the Bacillus subtilis spore spectra has a cross-section of no more than 4 x 10(-18) cm(2)/mol-sr.

UV Raman spectral intensities of E. coli and other bacteria excited at 228.9, 244.0, and 248.2 nm.

Resonance Raman spectral intensities per average bacterial cell have been measured quantitatively for Gram-negative Escherichia coli, Citrobacter freundii, and Enterobacter aerogenes, as well as Gram-positive Bacillus subtilis and Staphylococcus epidermidis. Spectra have been obtained from cultures in the lag, log, and stationary growth phases excited in turn by 228.9, 244.0, and 248.2 nm light. Although Raman spectral peak positions (cm(-1)) excited by a given wavelength are very similar for all five bacterial species, the organisms are characterized by significantly different spectral intensity values. Intensity changes are associated with growth phase changes in all of the species as well. A comparison of measured with estimated average intensities has been made for spectra of log-phase E. coli. It is possible to compare measured intensities with intensities estimated for log-phase E. coli on the basis of the knowledge of its known average cellular molecular composition. A significant degree of hypochromism is observed in E. coli nucleic acid spectra. In contrast, strong average hyperchromism characterizes all aromatic amino acid peaks belonging to the same E. coli cells. Results suggest that knowledge of spectral intensity values will enhance significantly the capability to identify bacteria by means of their UV resonance Raman spectra.

Tardive dyskinesia--diagnostic issues, subsyndromes, and concurrent movement disorders: a study of state hospital inpatients referred to a movement disorder consultation service.

Of 49 state hospital patients referred for movement disorder consultation for tardive dyskinesia (TD), 11 (23.9%) of 46 meeting inclusion criteria had movement disorders other than TD. These other disorders led to a false diagnosis of TD in 6 subjects (12.2%). Between-day dyskinesia variability affected TD ascertainment in only 3.2 percent of subjects. Prevalences of other neurological conditions in the 30 patients identified with definite TD were parkinsonism (90%), dystonia (25%), akathisia (16%), cerebellar signs (40%), dysmetria (23%), cerebellar tremor (17%), tardive dystonia (3.3%), and tardive akathisia (3.3%). Concurrence rates of parkinsonism with TD varied significantly according to which clinical signs were used to define parkinsonism. Using a rating score threshold of at least mild, rigidity occurred in 79.3 percent, bradykinesia in 55.2 percent, and resting tremor in 41.4 percent of subjects with TD; more significant rigidity occurred in 41.4 percent, bradykinesia in 31.0 percent, and resting tremor in 20.7 percent. Concurrence rates of neurological conditions with TD subsyndromes were distributed rather evenly according to condition prevalences, except for an association of cervicotruncal TD with bradykinesia (perhaps because of ventromedial striatal presynaptic and postsynaptic D2 blockade, respectively). These findings, as well as the occurrence of equal gender ratio and relative under-representation of bipolar and alcohol disorders in subjects with definite TD, are discussed.

Intensities of E. coli nucleic acid Raman spectra excited selectively from whole cells with 251-nm light.

Escherichia coli bacteria in the logarithmic growth phase have been investigated by UV resonance Raman spectroscopy. Bacterial whole-cell Raman spectra excited at 251 nm reflect nearly exclusively the nucleic acid composition even though a very large fraction of the bacterial mass is composed of protein. It has been demonstrated that if bacteria are grown under controlled (logarithmic growth) conditions, which give rise to organisms of known average biochemical composition, the intensities of E. coli Raman spectra can be explained quantitatively from the knowledge of component nucleic acid base resonance Raman cross sections.

Free radical formation in X-irradiated crystals of 2'-deoxycytidine hydrochloride. Electron magnetic resonance studies at 10 K.

Single crystals of deoxycytidine hydrochloride (CdR.HCl) have been X-irradiated at 10 K with doses up to about 150 kGy and studied using 24 GHz (K-band) EPR, ENDOR and FSE spectroscopy. In this system, the cytosine base is protonated at the N3 position. Nine different radicals were characterized and identified. Three of these are ascribed to three versions of the one-electron reduced species, probably differing in their protonation state. Radicals formed by net hydrogen addition to the cytosine C5 and C6 positions were observed at 10 K. The hydrogen-abstraction radical at the deoxyribose C1' position most probably results from initial oxidation of the base. The remaining radical species are all localized to the sugar moiety, representing products formed by net hydrogen abstraction from three of the five available carbons of the deoxyribose sugar. The lack of base-centered oxidation products as well as the structures of the one-electron reduced species is rationalized by considering the specific proton donor-acceptor properties of this crystalline lattice in comparison with similar systems.

UV resonance Raman detection and quantitation of domoic acid in phytoplankton.

Cultures of the phytoplankton diatom, Pseudonitzschia multiseries, have been harvested under controlled growth conditions ranging from late logarithmic to late stationary phase (17-58 days). The amount of domoic acid (DA) present in the growth media and in the homogenized cells has been determined by HPLC. Defined samples of media, homogenized cells, whole cells, and whole cells in media have been laser excited at 251 nm for the purpose of selectively exciting intense UV resonance Raman spectra from DA in the samples. Neither media nor cell component spectra from algae seriously interfere with DA spectra. The spectral cross sections for the dominant 1652-cm-1 mode of DA have been determined for 242-, 251-, and 257-nm excitation. Maximum sensitivities are achieved with 251-nm excitation because cross sections for DA are a maximum, and interference from other algal components becomes very small. DA concentrations that have been determined with 251-nm excitation by resonance Raman methods correlate closely with values determined independently with HPLC, especially at higher DA concentrations. The UV resonance Raman analysis of DA in phytoplankton algae is shown to be very sensitive and quantitative as well as rapid and nonintrusive.

Electron paramagnetic resonance and electron nuclear double resonance studies of X-irradiated crystals of cytosine hydrochloride. Part I: free radical formation at 10 K after high radiation doses.

Anhydrous single crystals of cytosine hydrochloride (protonated at N3) have been X-irradiated at 10 K and studied using K-band EPR, ENDOR and FSE spectroscopy. At least seven radicals were present at 10 K after X irradiation with a dose of about 150 kGy. Two different protonation states of the one-electron reduced cytosine cation were observed: an amino-protonated species (R1) and the pristine one-electron reduced species (R2) with zero net charge. Apparently three deprotonated versions of the one-electron oxidized cytosine cation were formed: the amino-deprotonated cation (R3), an N3-deprotonated cation (R4) and an N1-deprotonated cation (R5). Finally, two products formed by net hydrogen addition to the cytosine base were observed: a C5 hydrogen-addition radical (R6) and a C6 hydrogen-addition radical (R7). The crystalline lattice of cytosine hydrochloride is characterized in part by a cytosine base initially protonated at the N3-position, thus forming a cytosine base cation, and in part by an extended network of hydrogen bonding involving the chlorine anions. Proton transfer properties of pristine one-electron oxidation and reduction base products in this lattice are discussed and are suggested as explanations of the unusual multitude of positions for deprotonation of the one-electron oxidized species as well as for the two protonation states of the reduction product observed. The magnetic parameters for the amino-protonated species R1 agree well with those extracted from previous studies of cytosine derivatives in frozen solutions and in various glasses.

Radiation damage to DNA base pairs. II. Paramagnetic resonance studies of 1-methyluracil x 9-ethyladenine complex crystals X-irradiated at 10 K.

Single crystals of the co-crystalline complex of 1-methyluracil and 9-ethyladenine were X-irradiated and studied using EPR, ENDOR and FSE spectroscopic techniques at 10 K. All together seven radicals were identified, and experimental evidence for at least one more species, as well as for a very low population of radical pairs, is available. Oxidation and reduction products appear to be stabilized at both base constituents of the pair. Of the 1-methyluracil moiety, the product formed by net hydrogen abstraction from the methyl group was observed, together with the 1-methyluracil anion and the 1-methyluracil-5-yl radical. From the 9-ethyladenine moiety, the N3-protonated 9-ethyladenine anion is stabilized. In addition, the 9-ethyladenine cation as well as traces of the amino-deprotonated cation were observed, together with the C8-H hydrogen adduct. The presence of oxidation and reduction products in each of the two bases may indicate that negligible energy transfer takes place between them. This behavior is different from that observed in the similar pair of 1-methylthymine-9-methyladenine. There also seems to be minor proton exchange between the two stacks of molecules: Interbase protonation-deprotonation channeled through the hydrogen-bonding scheme seems to be almost completely suppressed.

Electron spin resonance and electron nuclear double resonance study of X-irradiated deoxyadenosine: proton transfer behavior of primary ionic radicals.

A study of deoxyadenosine crystals (anhydrous form) after irradiation at 10 K found four base-centered radicals and one sugar-centered radical. Radical R1, thermally stable to about 100 K and photobleachable easily with white light, was the product of deprotonation at the amino group by the primary radical cation. Radical R2, also thermally stable to about 100 K, was the product of protonation at N3 of the primary radical anion. Radical R3, stable to about 170 K, was centered in the deoxyribose moiety and evidently was the result of net hydrogen abstraction from C4'. Radicals R4 and R5 were the C2 and C8 H-addition products with couplings typical of those species. Both R4 and R5 were formed at 10 K and were stable at room temperature. The behavior of R1 in several systems provides additional evidence for significant involvement of the hydrogen-bonding environment in controlling the stabilization (or formation) of radicals resulting directly from ionization, as described previously (Radiat. Res. 131, 272-284, 1992). From comparison of amino-group hydrogen-bonding environments in which radicals with the structure of R1 were stabilized, we conclude that oxygen atoms as proton acceptors are important in permitting the charge and spin separation necessary for radical stabilization. In particular, oxygens of ROH structures seem most efficient by readily permitting a multi-proton shuffle through a mechanism amounting to proton exchange. The collective results show that stabilization of these products is unlikely unless the charge and spin can be separated by at least one intervening molecule.

Differentiation of algae clones on the basis of resonance Raman spectra excited by visible light.

Fourteen algae clones belonging to four different classes, including clones of Pseudo-nitzschia (Bacillariophyceae), some of which are capable of producing the toxin domoic acid, have been studied by means of resonance Raman spectra excited at 457.9 and 488 nm. Spectra taken at both excitation wavelengths are of high quality and are sufficiently distinct to differentiate clones at the algal class level. All spectra contain major features near 1000, 1153, and 1523 cm(-)(1), which are strongly resonance enhanced due to carotenoid pigments. Weaker features between 920-980 and 1170-1230 cm(-)(1), also due to carotenoid pigments, are more characteristic of the algae clones and more directly reflect different carotenoid composition. Similarities and differences among spectra have been analyzed by the method of principal component analysis (PCA). A distinct clustering of spectral data according to algal class has been shown by PCA score plots. All Pseudo-nitzschia clones can be separated from other classes of algae on the basis of spectra, but it is not possible to distinguish toxic Pseudo-nitzschia from nontoxic clones on the basis of these spectra, which reflect only differences in carotenoid composition.

Radiation damage to DNA base pairs. I. Electron paramagnetic resonance and electron nuclear double resonance study of single crystals of the complex 1-methylthymine.9-methyladenine X-irradiated at 10K.

Single crystals of the complex 1-methylthymine.9-methyl-adenine were X -irradiated at 10 and at 65 K and studied in the temperature range 10 to 290 K using K-band EPR, ENDOR and field-swept ENDOR (FSE) techniques. The EPR and ENDOR spectra are dominated by two major and four minor resonances. The two major resonances are: MTMA1, the well-known radical formed by net hydrogen abstraction fr om the CS methyl group of the thymine moiety, and MTMA2, the radical formed by net hydrogen abstraction from the N1 methyl group of the thymine moiety. The latter product has not been observed previously in any 1-methylthymine derivative. The four minor resonances are: MTMA3, the anion of 1-methylthymine, possibly protonated at the O4 position; MTMA4, the well-known species formed by net hydrogen addition to C6 of the thymine moiety; MTMA5, the species formed by net hydrogen addition to C2 of the adenine moiety; and MTMA6, the species formed by net hydrogen addition to C8 of the adenine moiety. Radical MTMA3, the O4-protonated thymine anion, was clearly detected at 10 K, but upon thermal annealing at 40 K the lines began to disappear. In crystals irradiated at 65 K MTMA3 was only weakly present. Radical MTMA2 decayed at about 250 K with no detectable successor, and radical MTMA5 disappeared at about 180 K. It was not possible to learn from the d ata if MTMA5 transformed into MTMA6. The radical distribution in the 1-methylthymine.9-methyladenine crystal system is different from that in crystals of the individual components. Reasons for this behavior are discussed in light of the hydrogen bonding schemes and molecular stacking interactions in each of the crystals. An important feature is the concept of excited-state transfer from the adenine to the thymine moiety, followed by dehydrogenation at the thymine Nl-methyl group, the mechanism resulting in radical MTMA2.

Free radical formation in single crystals of 9-methyladenine X-irradiated at 10 K. An electron paramagnetic resonance and electron nuclear double resonance study.

Single crystals of 9-methyladenine were X-irradiated at 10 K and at 65 K and were studied using K-band EPR, ENDOR and field-swept ENDOR (FSE) techniques in the temperature range 10 K to 290 K. Three major radicals are stabilized in 9-methyladenine at 10 K. These are: MA1, the adenine anion, probably protonated at N3; MA2, the species formed by net hydrogen abstraction from the 9-methyl group; and MA3, the radical formed by net hydrogen addition to C8 of the adenine moiety. Radical MA1 decayed at about 80 K, possibly into the C2 H adduct (MA4). The other two species (MA2, MA3) were stable at room temperature. A fifth radical species was clearly present in the EPR spectra at 10 K but was not detectable by ENDOR. This species, which decayed above 200 K (possibly into MA3), remains unidentified. The radical population at room temperature is as described by previous authors. The mechanisms for radical formation in 9-methyladenine are discussed in light of the hydrogen bonding scheme and molecular stacking interactions.

ESR and ENDOR study of single crystals of deoxyadenosine monohydrate X-irradiated at 10 K.

Five free radicals have been detected by detailed ESR/ENDOR experiments on single crystals of deoxyadenosine monohydrate (AdRm), X-irradiated and observed at 10 K. In a previous study of adenosine (Radiat. Res. 117, 367-378, 1989), only the anion (protonated at N3) and the cation (deprotonated at the exocyclic NH2) were detected at 10 K. In AdRm, Radical R1 is the N3-protonated anion, similar to that observed previously in adenosine. Radical R3 is a C5' hydroxyalkyl radical formed by net H-abstraction from C5'. A second sugar radical is formed by net C1' H-abstraction. Two other base radicals observed in AdRm at 10 K are the C2 and C8 H-addition radicals. The C2 H-addition radical (Radical R5) exhibits inequivalent methylene hydrogen couplings of 5.43 and 3.29 mT, while in the C8 H-addition radical (Radical R6) the couplings are somewhat more equivalent (3.63 and 4.17 mT). No link between RAdical R1 and the H-addition radicals has been observed. The reduced base appears to protonate rapidly even at 10 K, while at the same time both H-addition radicals are clearly present. On warming, Radical R1 appears to decay at about 80 K with no apparent successor. Although no base cation was stabilized in AdRm at 10 K, it is interesting to note that Radicals R3 and R4 could both be formed as the result of deprotonation of primary oxidation products.

Ionization of adenine derivatives: EPR and ENDOR studies of X-irradiated adenine.HCl.1/2H2O and adenosine.HCl.

Following X irradiation of adenine.HCl.H2O at 10 K, evidence for five distinct radical products was present in the EPR/ENDOR. (In both adenine.HCl.1/2H2O and adenosine.HCl, the adenine base is present in a cationic form as it is protonated at N1). From ENDOR data, radical R1, stable at temperatures up to 250 K, was identified as the product of net hydrogen loss from N1. This product, evidently formed by electron loss followed by proton loss, is equivalent to the radical cation of the neutral adenine base. Radical R2, unstable at temperatures above 60 K, was identified as the product of net hydrogen addition to N3, and evidently formed by electron addition followed by proton addition. Radicals R3-R5 could not be identified with certainty. Similar treatment of adenosine.HCl provided evidence for six identifiable radical products. Radical R6, stable to ca. 150 K, was identified as the result of net hydrogen loss from the amino group, and evidently was the product of electron loss followed by proton loss. Radical R7 was tentatively identified as the product of net hydrogen addition to C4 of the adenine base. Radical R8 was found to be the product of net hydrogen addition to C2 of the adenine base, and R9 was the product of net hydrogen addition to C8. Radical R10 was identified as the product of net hydrogen abstraction from C1' of the ribose, and R11 was an alkoxy radical formed from the ribose. With the exception of R11, all products were also found following irradiation at 65 K. Only radical R8 and R9 were stable at room temperature. Most notable is the different deprotonation behavior of the primary electron-loss products (radical R1 vs. R6) and the different protonation behavior of the primary electron-gain products (radical R2 vs. no similar product in adenosine.HCl). The major structural difference in the two crystals is the electrostatic environment of the adenine base. Therefore, this study provides further evidence that environmental influences are important in determining proton transfer processes.

On the proton transfer behavior of the primary oxidation product in irradiated DNA.

Results are surveyed from investigations of six adenine and six guanine crystal systems X-irradiated and studied at temperatures near that of liquid helium (T less than 10 K). Basic conclusions from the overall results are that the primary oxidation products deprotonate rapidly, and that the specific site of deprotonation is environment-dependent. The following systematic behaviors were identified: (1) in no case was there deprotonation at a site hydrogen-bonded to a halide ion (three examples with guanine and two with adenine); (2) likewise, in no case was there deprotonation at a site hydrogen-bonded to a phosphate group (three examples, all with guanine); (3) in no case was there deprotonation at a site involving an greater than N-H . . . N less than hydrogen bond; (4) in all cases except one, the site of net deprotonation involved greater than N-H . . . O hydrogen bonds. In the remaining case, the leaving proton was uninvolved in hydrogen bonding. A review of results obtained previously from DNA leads to the conclusion that the actual protonation states of DNA oxidation products are unknown at the present time. The results presented here predict with high probability that such DNA products also will deprotonate, but the environment dependence makes it difficult to predict the specific sites. Thus the importance of obtaining this information from direct experimental evidence is increased.

Free radical formation in X-irradiated anhydrous crystals of inosine studied by EPR and ENDOR spectroscopy.

Single crystals of anhydrous inosine were studied subsequent to exposure to high and low doses of X radiation at 10 K using K-band, EPR, ENDOR, and field-swept-ENDOR (FSE) techniques. Immediately following high radiation doses at 10 K at least eight different radicals, RI-RVIII, were observed. All radicals, except for RVIII, were also observed at low doses, but the relative yields varied with the radiation doses. RI, which decayed with no observable successor at about 65 K, has magnetic characteristics similar to those expected for the hypoxanthine base cation. RII, the dominating radical at low radiation doses, exhibits only one hyperfine coupling amenable for ENDOR analysis. From the nature of this coupling and the EPR and FSE characteristics of the resonance, it is suggested that RII is formed by addition of a neighbor sugar fragment to the C2 position of a hypoxanthine base, forming a C2-O5'-C5' ester bond. RII is unstable and decayed at about 60 K without any detectable successor. RIII and RIV are the C2 and C8 H-addition radicals, respectively. These species are formed in minor amounts after irradiation at low temperatures, and they are the only observable radicals left at room temperature. Two sugar-centered radicals, RV and RVI, are formed by net H-abstraction from the C4' and C5' positions, respectively. These radicals dominate the EPR spectra after high radiation doses at low temperatures. A transformation from RV into RIII, the C2 H-adduct, started at about 80 K. Similarly, a transformation of RVI into RIV started at about 210 K. Several minor species were analyzed. RVII is characterized by an alpha-coupling due to 26% spin density at C8, and RVIII is characterized by 12% pi-spin density at N1. Possible structures for these radicals are discussed.

Free radical formation in single crystals of 2'-deoxyguanosine 5'-monophosphate tetrahydrate disodium salt: an EPR/ENDOR study.

Single crystals of 2'-deoxyguanosine 5'-monophosphate were X-irradiated at 10 K and at 65 K, receiving doses between 4.5 and 200 kGy, and studied using K-band EPR, ENDOR, and field-swept ENDOR (FSE) spectroscopy. Evidence for five base-centered and more than nine sugar-centered radicals was found at 10 K following high radiation doses. The base-centered radicals were the charged anion, the N10-deprotonated cation, the C8 H-addition radical, a C5 H-addition radical, and finally a stable radical so far unidentified but with parameters similar to those expected for the charged cation. The sugar-centered radicals were the H-abstraction radicals centered at C1', C2', C3', and C5', an alkoxy radical centered at O3', a C5'-centered radical in which the C5'-O5' phosphoester bond appears to be ruptured, a radical tentatively assigned to a C4'-centered radical involving a sugar-ring opening, as well as several additional unidentified sugar radicals. Most radicals were formed regardless of radiation doses. All radicals formed following low doses (4.5-9 kGy) were also observed subsequent to high doses (100-200 kGy). The relative amount of some of the radicals was dose dependent, with base radicals dominating at low doses, and a larger relative yield of sugar radicals at high doses. Above 200 K a transformation from a sugar radical into a base radical occurred. Few other radical transformations were observed. In the discussion of primary radicals fromed in DNA, the presence of sugar-centered radicals has been dismissed since they are not apparent in the EPR spectra. The present data illustrate how radicals barely traceable in the EPR spectra may be identified due to strong ENDOR resonances. Also, the observation of a stable radical with parameters similar to those expected for the charge guanine cation is interesting with regard to the nature of the primary radicals stabilized in X-irradiated DNA.

The structure of the guanine cation: ESR/ENDOR of cyclic guanosine monophosphate single crystals after X irradiation at 10 K.

Following X irradiation of 3',5'-cyclic guanosine monophosphate single crystals at 10 K, several free radicals were trapped and detected by ESR/ENDOR/FSE spectroscopy. The two dominant species both have unpaired spin located on the guanine base. One is the product of net hydrogen atom loss from the exocyclic amino group. The spectroscopic characteristics of this resonance leave this assignment unambiguous. The experimental conditions make it likely that this species was formed by deprotonation of the guanine base cation. The nature of the other species is more uncertain. However, the evidence is consistent with the assignment that it is a net OH adduct to the C4 position of the base. Several species in which the unpaired spin was located on the sugar-phosphate region of the molecule were also observed. The mechanisms for the decay of the primary radicals, also leading to the well-known C8 hydrogen addition radical of the guanine base, are described and discussed.