A first de novo transcriptome assembly of feijoa (Acca sellowiana [Berg] Burret) reveals key genes involved in flavonoid biosynthesis.

Acca sellowiana [Berg] Burret, a cultivated fruit tree originating from South America, is gaining the attention of the nutraceutical and pharmaceutical industries due to their high content of flavonoids and other phenolic compounds in fruits, leaves, and flowers. Flavonoids are a diverse group of secondary metabolites with antioxidant, anti-inflammatory, and antimicrobial properties. They also play a crucial role in plant immune response. Despite their importance, the lack of research on A. sellowiana genomics and transcriptomics hinders a deeper understanding of the molecular mechanisms behind flavonoid biosynthesis and its regulation. Here, we de novo assembled and benchmarked 11 A. sellowiana transcriptomes from leaves and floral tissues at three developmental stages using high-throughput sequencing. We selected and annotated the best assembly according to commonly used metrics and databases. This reference transcriptome consisted of 221,649 nonredundant transcripts, of which 107,612 were functionally annotated. We then used this reference transcriptome to explore the expression profiling of key secondary metabolite genes. Transcripts from genes involved in the flavonoid and anthocyanin biosynthesis pathways were identified. We also identified 4068 putative transcription factors, with the most abundant families being bHLH, C2H2, NAC, MYB, and MYB-related. Transcript expression profiling revealed distinct patterns of gene expression during flower development. Particularly, we found 71 differentially expressed transcripts representing 14 enzymes of the flavonoid pathway, suggesting major changes in flavonoid accumulation across floral stages. Our findings will contribute to understanding the genetic basis of flavonoids and provide a foundation for further research and exploitation of the economic potential of this species.

An update in Claviceps paspali disease: a comprehensive analysis on field and greenhouse Paspalum spp. Infection.

Paspalum L. is a genus of the Poaceae family, with many species serving as well-adapted forage plants in subtropical climates and continuous grazing systems. However, Claviceps paspali, an ascomycete of the order Hypocreales, represents a major threat to Paspalum species. This fungus induces ergot disease, characterized by the replacement of infected flower seeds with sclerotia, which adversely affects seed production and animal health through mycotoxin production. Although ergot disease is reported in many countries, no totally resistant Paspalum cultivars have been reported for commercial use. This study comparatively evaluated disease development in six Paspalum species under greenhouse conditions with three specific isolates of C. paspali, along with field trials. In addition, field isolates of C. paspali were analyzed for phenotypic characteristics and phylogenetic relationships. Greenhouse evaluation revealed variable susceptibility among Paspalum species, with P. malacophyllum,P. notatum and P. umbrosum being the most resistant. In field trials P. dilatatum showed the highest severity index, while P. umbrosum and P. malacophyllum were less affected. Phenotypic characterization of 22 C. paspali isolates showed variability in pigmentation and growth rates, with PDA being the culture medium where the highest growth rate was observed. Phylogenetic analysis of the isolates identified two well-supported lineages between C. paspali species. This research reports an ergot resistance gradient among Paspalum species, identifying genuine sources of resistance. In addition, virulent isolates of C. paspali potentially useful for rapid screening of accessions or crosses in Paspalum breeding programs were identified.

Beauveria bassiana transcriptomics reveal virulence-associated shifts during insect lipid assimilation.

Insect cuticular lipids, especially epicuticular hydrocarbons (CHC), have a significant role in insect ecology and interactions with other organisms, including fungi. The CHC composition of a specific insect species may influence the outcome of the interaction with a specific fungal strain. Some insects, such as Piezodorus guildinii, have low susceptibility towards fungal infections seemingly due to their CHC composition. The entomopathogenic fungus Beauveria bassiana can assimilate CHC and incorporate them as building blocks via cytochrome P450 monooxygenases (CYPs). However, little is known about other enzymes that promote the degradation/assimilation of these cuticular components. In this study, we performed a transcriptomic analysis to evaluate the in vitro response of two virulence-contrasting B. bassiana strains when grown on three different P. guildinii CHC sources. We found a different expression profile of virulence-related genes, as well as different GO and KEGG parameters enriched at 4 days post-inoculation, which could help account for the intrinsic virulence and for an alkane-priming virulence enhancement effect. The hypovirulent strain predominantly showed higher expression of cuticle penetration genes, including chitinases, proteases, and CYPs, with GO term categories of "heme binding," "monooxygenase activity," and "peroxisome" pathways enriched. The hypervirulent strain showed higher expression of cell wall remodeling and cell cycle genes, and cuticle adhesion and a distinct set of CYPs, with GO categories of "DNA-binding transcription factor activity" and KEGG pathways corresponding to "meiosis-yeast" and "cell cycle" enriched. These results suggest a delay and alternate routes in pathogenicity-related metabolism in the hypovirulent strain in comparison with the hypervirulent strain. KEY POINTS: •Transcriptomics of two B. bassiana strains grown in P. guildinii cuticular components •Virulence-related genes correlated with virulence enhancement towards P. guildinii •Differentially expressed genes, GOs and KEGGs showed different metabolic timelines associated with virulence.