Community structure and species composition of a periodically flooded Restinga forest in Caraguatatuba, São Paulo, Brazil / Estrutura e composição de espécies de uma floresta de Restinga periodicamente alagada em Caraguatatuba, São Paulo, Brasil

Abstract: The aim of this study was to characterize the structure and composition of the tree and shrub community in a 77-ha fragment of Restinga forest in Caraguatatuba, São Paulo, Brazil. In this fragment, forty 20 × 20-m plots (1.6 ha) were systematically allocated and all trees with a stem diameter at breast height (DBH) ≥4.8 cm were sampled. Sixteen plots were randomly chosen to also sample individuals with a DBH of between 1 and 4.8 cm. All individuals were tagged, identified to species level, and their diameters and heights were measured. A total of 2587 individuals (1616 ind./ha) from 119 species and 42 families were found with a DBH >4.8 cm, and 2659 individuals (4154 ind./ha) from 125 species and 38 families were found with a DBH >1 cm. The richest families were Myrtaceae, Lauraceae, and Fabaceae, and the most abundant species were Diospyros brasiliensis (Ebenaceae), Anaxagorea dolichocarpa (Annonaceae), and Euterpe edulis (Arecaceae). The structure of the studied site was similar to that of other Restinga forest sites, but the forest composition was quite distinct. Implications for the conservation and restoration of Restinga forests in this region are discussed in light of the results obtained.

Resumo: O objetivo deste estudo foi caracterizar a estrutura e composição da comunidade arbórea e arbustiva em um fragmento de 77 ha de floresta de Restinga em Caraguatatuba, São Paulo. Neste fragmento, 40 parcelas de 20 × 20 m (1,6 ha) foram distribuídas sistematicamente e todas as árvores com diâmetro do tronco na altura do peito (DAP) ≥4,8 cm foram amostradas. Além disso, 16 parcelas foram escolhidas aleatoriamente para amostrar também todos os indivíduos com DAP entre 1 e 4.8 cm de DAP. Todos os indivíduos foram marcados, identificados ao nível de espécie e tiveram seu diâmetro e altura medidos. Para indivíduos acima de 4,8 cm de DAP, foi amostrado um total de 2587 indivíduos (1616 ind./ha) em 119 espécies e 42 famílias. Para indivíduos acima de 1 cm de DAP, foi amostrado um total de 2659 indivíduos (4154 ind./ha) em 125 espécies e 38 famílias. As famílias mais ricas foram Myrtaceae, Lauraceae e Fabaceae. As espécies mais abundantes foram Diospyros brasiliensis, Anaxagorea dolichocarpa e Euterpe edulis. Quando comparado com outros locais de florestas de Restinga, a estrutura florestal do fragmento estudado é semelhante a outras florestas de Restinga. No entanto, a composição da floresta é bastante distinta, evidenciando a heterogeneidade das florestas de Restinga ao longo da costa do Brasil. Implicações para a conservação e restauração das florestas de Restinga são destacadas.

Can plant DNA barcoding be implemented in species-rich tropical regions? A perspective from São Paulo State, Brazil.

DNA barcoding helps to identify species, especially when identification is based on parts of organisms or life stages such as seeds, pollen, wood, roots or juveniles. However, the implementation of this approach strongly depends on the existence of complete reference libraries of DNA sequences. If such a library is incomplete, DNA-based identification will be inefficient. Here, we assess if DNA barcoding can already be implemented in species-rich tropical regions. We focus on the tree flora of São Paulo state, Brazil, which contains more than 2000 tree species. Using new DNA sequence data and carefully assembled GenBank accessions, we assembled 12,113 sequences from ten different regions. The ITS, rbcL, psbA-trnH, matK and trnL regions were better represented within the available sequences for São Paulo tree flora. Currently, only 58% of the São Paulo tree flora currently have at least one barcoding sequence available. However, these species represent on average 89% of the trees in São Paulo state forests. Therefore, conservation-oriented and ecological studies can already benefit from DNA barcoding to obtain more accurate species identifications. We present which taxa remain underrepresented for the São Paulo tree flora and discuss the implications of this result for other species-rich tropical regions.

Making a Bad Situation Worse: An Invasive Species Altering the Balance of Interactions between Local Species.

Biological invasions pose a significant threat to biodiversity, especially on oceanic islands. One of the primary explanations for the success of plant invaders is direct suppression of competitors. However, indirect interactions can also be important, although they are often overlooked in studies on biological invasion. The shrub Leucaena leucocephala is a widespread island invader with putative allelopathic effects on the germination and growth of other species. We quantified the impact of Leucaena on plant communities richness on an oceanic Brazilian island and, through nursery experiments, investigated the potential for allelopathic effects on the germination of Erythrina velutina, a native species that is often absent from stands of Leucaena. Additionally, in a manipulative field experiment, we examined the direct and indirect effects (mediated by the native species Capparis flexuosa) of the invader on the development of Erythrina. The species richness in invaded sites was lower than in uninvaded sites, and Capparis was the only native species that was frequently present in invaded sites. In the nursery experiments, we found no evidence that Leucaena affects the germination of Erythrina. In the field experiments, the odds of Erythrina germination were lower in the presence of Leucaena litter, but higher in the presence of Leucaena trees. However, the survival and growth of Erythrina were considerably inhibited by the presence of Leucaena trees. The isolated effect of native Capparis on the germination and growth of Erythrina varied from positive to neutral. However, when Capparis and Leucaena were both present, their combined negative effects on Erythrina were worse than the effect of Leucaena alone, which may be attributed to indirect effects. This study provides the first empirical evidence that the balance of the interactions between native species can shift from neutral/positive to negative in the presence of an exotic species.

Litterfall and leaf decomposition in forest fragments under different successional phases on the Atlantic Plateau of the state of Sao Paulo, Brazil / Produção de serrapilheira e decomposição foliar em fragmentos florestais de diferentes fases sucessionais no Planalto Atlântico do estado de São Paulo, Brasil

Litterfall and litter decomposition are vital processes in tropical forests because they regulate nutrient cycling. Nutrient cycling can be altered by forest fragmentation. The Atlantic Forest is one of the most threatened biomes in the world due to human occupation over the last 500 years. This scenario has resulted in fragments of different size, age and regeneration phase. To investigate differences in litterfall and leaf decomposition between forest successional phases, we compared six forest fragments at three different successional phases and an area of mature forest on the Atlantic Plateau of Sao Paulo, Brazil. We sampled litter monthly from November 2008 to October 2009. We used litterbags to calculate leaf decomposition rate of an exotic species, Tipuana tipu (Fabaceae), over the same period litter sampling was performed. Litterfall was higher in the earliest successional area. This pattern may be related to the structural properties of the forest fragments, especially the higher abundance of pioneer species, which have higher productivity and are typical of early successional areas. However, we have not found significant differences in the decomposition rates between the studied areas, which may be caused by rapid stabilization of the decomposition environment (combined effect of microclimatic conditions and the decomposers activities). This result indicates that the leaf decomposition process have already been restored to levels observed in mature forests after a few decades of regeneration, although litterfall has not been entirely restored. This study emphasizes the importance of secondary forests for restoration of ecosystem processes on a regional scale.

A produção e a decomposição de serrapilheira são processos vitais nas florestas tropicais, uma vez que determinam a ciclagem de nutrientes. O processo de ciclagem de nutrientes pode ser alterado pela fragmentação florestal. A Floresta Atlântica é um dos biomas mais ameaçados mundialmente devido à ocupação humana nos últimos 500 anos. Este cenário resultou em fragmentos de diferentes tamanhos, idades e estádios de regeneração. Para explorar as diferenças na produção de serrapilheira e na decomposição foliar de acordo com o estádio sucessional da floresta, comparamos seis fragmentos florestais em três diferentes estádios sucessionais e uma área de floresta primária no Planalto Atlântico de São Paulo, Brasil. Coletamos a serrapilheira mensalmente de novembro de 2008 a outubro de 2009. Utilizamos bolsas de confinamento de serrapilheira para calcular a taxa de decomposição foliar de uma espécie exótica, Tipuana tipu (Fabaceae), durante o mesmo período de coleta da serrapilheira. A deposição de serrapilheira foi maior na área de estádio sucessional mais inicial. Esse padrão pode estar relacionado com as características estruturais dos fragmentos florestais, especialmente com a maior abundância de espécies pioneiras, que possuem uma maior produtividade e são espécies típicas de fragmentos em estádios iniciais de sucessão. Por outro lado, não encontramos diferenças significativas nas taxas de decomposição entre as áreas estudadas, o que pode ocorrer devido à rápida estabilização do ambiente de decomposição (efeito combinado das condições microclimáticas e das atividades dos decompositores). Estes resultados indicam que o processo de decomposição foliar foi restabelecido aos níveis das florestas maduras após algumas décadas de regeneração, embora a produção de serrapilheira ainda não tenha sido totalmente restaurada. Este estudo destaca a importância das florestas secundárias em um cenário regional de restauração de processos ecossistêmicos.