Advantages and limitations of using matrix pencil method for the modal analysis of medical percussion signals.

Although clinical percussion remains one of the most widespread traditional noninvasive methods for diagnosing pulmonary disease, the available analysis of physical characteristics of the percussion sound using modern signal processing techniques is still quite limited. The majority of existing literature on the subject reports either time-domain or spectral analysis methods. However, Fourier analysis, which represents the signal as a sum of infinite periodic harmonics, is not naturally suited for decomposition of short and aperiodic percussion signals. Broadening of the spectral peaks due to damping leads to their overlapping and masking of the lower amplitude peaks, which could be important for the fine-level signal classification. In this study, an attempt is made to automatically decompose percussion signals into a sum of exponentially damped harmonics, which in this case form a more natural basis than Fourier harmonics and thus allow for a more robust representation of the signal in the parametric space. The damped harmonic decomposition of percussion signals recorded on healthy volunteers in clinical setting is performed using the matrix pencil method, which proves to be quite robust in the presence of noise and well suited for the task.

Estimating the parameters of audible clinical percussion signals by fitting exponentially damped harmonics.

Used for centuries in the clinical practice, audible percussion is a method of eliciting sounds by tapping various areas of the human body either by finger tips or by a percussion hammer. Despite its advantages, pulmonary diagnostics by percussion is still highly subjective, depends on the physician's skills, and requires quiet surroundings. Automation of this well-established technique could help amplify its existing merits while removing the above drawbacks. In this work, clinical percussion signals from normal volunteers are decomposed into a sum of exponentially damped sinusoids (EDS) whose parameters are determined using the Matrix Pencil Method. Some EDS represent transient oscillation modes of the thorax/abdomen excited by the percussion event, while others are associated with the noise. It is demonstrated that relatively few EDS are usually enough to accurately reconstruct the original signal. It is shown that combining the frequency and damping parameters of these most significant EDS allows for efficient classification of percussion signals into the two main types historically known as "resonant" and "tympanic." This classification ability can provide a basis for the automated objective diagnostics of various pulmonary pathologies including pneumothorax. The algorithm can be implemented on an embedded platform for the battlefield and other emergency applications.

Dissociation kinetics of an enzyme-inhibitor system using single-molecule force measurements.

We report on an improved method to interpret single molecule dissociation measurements using atomic force microscopy. We describe an easy to use methodology to reject nonspecific binding events, as well as estimating the number of multiple binding events. The method takes nonlinearities in the force profiles into account that result from the deformation of the used polymeric linkers. This new method is applied to a relevant enzyme-inhibitor system, latent matrix metalloprotease 9 (ProMMP-9, a gelatinase), and its inhibitor, tissue inhibitor of metalloproteases 1 (TIMP 1), which are important players in cancer metastasis. Our method provides a measured kinetic off-rate of 0.010 ± 0.003 s(-1) for the dissociation of ProMMP9 and TIMP1, which is consistent with values measured by ensemble methods.

Improving a high-resolution fiber-optic interferometer through deposition of a TiO2 reflective coating by simple dip-coating.

Fiber-optic based interferometers are used to detect small displacements, down to the subnanometer range. Coating the end of the optical fiber with a partially reflecting thin film greatly improves the resolution of interferometers by increasing the multiple reflections between the fiber end and the measured object. In this work, we present a quick and easy thin film deposition technique to coat the end of a single optical fiber by dip-coating a metal-organic precursor, which is then decomposed in a propane flame. The coated fiber was tested for morphology and usefulness for interferometric application. We found that this coating technique is much faster and easier than conventional thin coating techniques, and yields results that are comparable or better than can be achieved with sputtering or thermal evaporation.

Simultaneous normal and shear measurements of nanoconfined liquids in a fiber-based atomic force microscope.

We have developed an atomic force microscopy (AFM) technique that can perform simultaneous normal and shear stiffness measurements of nanoconfined liquids with angstrom-range amplitudes. The AFM technique is based on a fiber-interferometric, small-amplitude, off-resonance AFM. This AFM is capable of providing linear quasistatic measurements of the local mechanical properties of confined liquid layers while only minimally disturbing the layers themselves. A detailed analysis of the measurement geometry reveals that shear stiffness measurements are extremely challenging, as even small deviations from perfect orthogonality can lead to data that is very difficult to interpret. We will show ways out of this dilemma and present results that show simultaneous measurement of the shear and normal stiffness of confined liquid layers.