Humoral anti-SARS-CoV-2 response in patients with different long COVID phenotypes.

Long COVID (LC) is characterized by persistent symptoms following SARS-CoV-2 infection, with various mechanisms offered to explain its pathogenesis. This study explored whether adaptive humoral anti-SARS-CoV-2 responses differ in LC. Unvaccinated COVID-19 convalescents (n = 200) were enrolled, with 21.5% (n = 43) presenting LC three months post-infection. LC diagnosis was based on persistent symptom(s) and alterations in biochemical/clinical markers; three phenotypes were distinguished: cardiological, pulmonary, and psychiatric LC. All three phenotypes were characterized by significantly decreased seroprevalence of IgG antibodies against nucleocapsid (anti-NP). LC was associated with decreased odds of testing positive for anti-NP (OR = 0.35, 95%CI: 0.16-0.78, p = 0.001). Seropositive LC patients had lower anti-S1 and anti-S2 levels than individuals without LC, and those with pulmonary and psychological phenotypes also revealed decreased anti-RBD concentrations. The results indicate that LC can be characterized by diminished humoral response to SARS-CoV-2. The potential implication of this phenomenon in post-acute viral sequelae is discussed.

Spatio-temporal variations in water quality of a river-lake system during restoration treatments.

To fill the knowledge gap about the functioning of the lake-river system subjected to restoration treatments, two tributaries, a shallow, restored lake and its outflow, were examined. The quality of water inflows, lake and outflow was compared before (BR), during sustainable (SR, deep water aeration, phosphorus inactivation and biomanipulation for 3 years) and limited lake restoration (LR, only aeration for 2 years). Physico-chemical parameters were analysed monthly at five stations. The nutrient concentrations at the inflows decreased over the years due to the improvement of water and sewage management in the catchment (in Mielcuch from 18.0 to 8.0 mgN L-1 and 1.0 to 0.6 mgP L-1). The decline at the outflow was the result of a better quality of water at the tributaries and SR in the lake. During LR, decrease of phosphorus concentration still occurred (0.11 mgP L-1), but nitrogen concentration slightly increased (3.9 mgN L-1). Although the outflowing waters still transported a high content of chlorophyll a and suspended solids during SR, their amount was lower (34.5 µg L-1 and 17 mg L-1, respectively) than that during BR and LR. During restoration, it is significant to monitor the water quality not only in the lake but also at the outflow. The slow deterioration of water quality at the outflow indicated that introducing changes in the applied restoration methods must be done carefully because the previously achieved effect may be lost. Hence, restoration of the upstream lake and good quality of its tributaries are of great importance for water bodies located downstream.

Polysaccharide-protein complex from coelomic fluid of Dendrobaena veneta earthworm exerts a multi-pathway antiplatelet effect without coagulopathy and cytotoxicity.

There is a pressing need to identify novel antiplatelet agents, an alternative to acetylsalicylic acid and thienopyridines, to broaden the prevention of cardiovascular events, the leading cause of global morbidity and mortality. Invertebrate coelomocytes structurally and functionally resemble the thrombocyte-like cells of vertebrates; therefore, the coelomic fluid in which they are suspended may contain agents controlling their clumping abilities. However, whether coelomocytes-free coelomic fluid may also affect human platelet activities was not a subject of any study. This study aimed to screen the in vitro antiplatelet and anticoagulant activities of the polysaccharide-protein complex from Dendrobaena veneta coelomic fluid (25-100 µg/mL) (PPC-DV). All tested fluid concentrations induced significant (42.4-52.5%) inhibition of adenosine-5'-diphosphate (ADP)-induced aggregation of human platelets at a level comparable to that of 140 µmol/L acetylsalicylic acid. Its relevant antiplatelet effect (27.2-45.9%) was also evidenced in the thrombin receptor-activating peptide-6 (TRAP-6) assay. Moreover, 50 and 100 µg/mL of PPC-DV inhibited arachidonic acid-inducible aggregation. No coagulopathic or cytotoxic effects of PPC-DV were observed. The study indicates that PPC-DV, at a concentration of at least 50 µg/mL, exerts a favorable antiplatelet effect by targeting at least three pathways (P2Y12 receptor, cyclooxygenase-1, and protease-activated receptor-1), justifying further experimental and clinical investigations on its use in cardiovascular disease prevention.

The association of airborne particulate matter and benzo[a]pyrene with the clinical course of COVID-19 in patients hospitalized in Poland.

Air pollution can adversely affect the immune response and increase the severity of the viral disease. The present study aimed to explore the relationship between symptomatology, clinical course, and inflammation markers of adult patients with coronavirus disease 2019 (COVID-19) hospitalized in Poland (n = 4432) and air pollution levels, i.e., mean 24 h and max 24 h level of benzo(a)pyrene (B(a)P) and particulate matter <10 µm (PM10) and <2.5 µm (PM2.5) during a week before their hospitalization. Exposures to PM2.5 and B(a)P exceeding the limits were associated with higher odds of early respiratory symptoms of COVID-19 and hyperinflammatory state: interleukin-6 > 100 pg/mL, procalcitonin >0.25 ng/mL, and white blood cells count >11 × 103/mL. Except for the mean 24 h PM10 level, the exceedance of other air pollution parameters was associated with increased odds for oxygen saturation <90%. Exposure to elevated PM2.5 and B(a)P levels increased the odds of oxygen therapy and death. This study evidences that worse air quality is related to increased severity of COVID-19 and worse outcome in hospitalized patients. Mitigating air pollution shall be an integral part of measures undertaken to decrease the disease burden during a pandemic of viral respiratory illness.

Air pollution might affect the clinical course of COVID-19 in pediatric patients.

Air pollution, to which children are more susceptible than adults, can promote airway inflammation, potentially exaggerating the effects of respiratory viral infection. This study examined the association between the clinical manifestation of COVID-19 in unvaccinated pediatric patients hospitalized in Poland (n = 766) and levels of particulate matter 2.5 (PM2.5) and benzo(a)pyrene (B(a)P) within a week before hospitalization. Children aged ≤ 12 years exposed to mean and max 24 h B(a)P levels > 1 ng/m3 revealed higher odds of cough, dyspnea, fever, and increased concentrations of inflammatory markers (C-reactive protein, interleukin-6, procalcitonin, white blood cell count). In older patients (13-17 years), elevated mean 24 h B(a)P levels increased odds of dyspnea, fever, and diarrhea, and higher concentrations of C-reactive protein and procalcitonin. Exposure to max 24 h PM2.5 levels > 20 µg/m3 was associated with higher odds of cough, increased concentrations of C-reactive protein (group ≤12 years), and increased procalcitonin concentration (groups ≤12 years and 13-17 years). In both age groups, length of stay was extended in patients exposed to elevated levels of max 24 h PM2.5, mean and max 24 h B(a)P. This study suggests that worse air quality, particularly reflected in increased B(a)P levels, might affect the clinical course of COVID-19 in pediatric patients and adds to the disease burden during a pandemic.

Genome Study of a Novel Virulent Phage vB_SspS_KASIA and Mu-like Prophages of Shewanella sp. M16 Provides Insights into the Genetic Diversity of the Shewanella Virome.

Shewanella is a ubiquitous bacterial genus of aquatic ecosystems, and its bacteriophages are also isolated from aquatic environments (oceans, lakes, ice, and wastewater). In this study, the isolation and characterization of a novel virulent Shewanella phage vB_SspS_KASIA and the identification of three prophages of its host, Shewanella sp. M16, including a mitomycin-inducible Mu-like siphovirus, vB_SspS_MuM16-1, became the starting point for comparative analyses of phages infecting Shewanella spp. and the determination of their position among the known bacterial viruses. A similarity networking analysis revealed the high diversity of Shewanella phages in general, with vB_SspS_KASIA clustering exclusively with Colwellia phage 9A, with which it forms a single viral cluster composed of two separate viral subclusters. Furthermore, vB_SspS_MuM16-1 presented itself as being significantly different from the phages deposited in public databases, expanding the diversity of the known Mu-like phages and giving potential molecular markers for the identification of Mu-like prophages in bacterial genomes. Moreover, the functional analysis performed for vB_SspS_KASIA suggested that, despite the KASIA host, the M16 strain grows better in a rich medium and at 30 °C the phage replication cycle seems to be optimal in restrictive culture conditions mimicking their natural environment, the Zloty Stok gold and arsenic mine.

The Reappearance of An Extremely Rare and Critically Endangered Nitella translucens (Charophyceae) in Poland.

We report the reappearance of the rare charophyte Nitella translucens in Poland. It was identified in the soft-water lobelian Lake Jelen (North Poland) during 2013 and 2018 phytolittoral surveys. This species is considered critically endangered in various European countries and was previously classified as extinct in Poland. Its occurrence was confirmed using morphological and molecular data (ITS1-18S, ITS2-28S, rDNA, and rbcL). The N. translucens occupied ~20% of the lake bottom, at depths of 1.5-6.5 m, water pH 7.5-8.6, conductivity of 59-66 µS · cm-1 , and total nitrogen and phosphorus during growing season in the range of 1.1-1.4 mg · L-1 and 0.07-0.1 mg · L-1 , respectively. It co-occurred mainly with plant species typical for lobelia lakes: Isoetes lacustris, Littorella uniflora, and Myriophyllum alterniflorum, as well as Ceratophyllum demersum and Elodea canadensis, which are characteristic for eutrophicated waters. It appears that N. translucens may thrive in lobelia lakes during their transformation to more eutrophic states.

Zooplankton changes during bottom-up and top-down control due to sustainable restoration in a shallow urban lake.

Long-term cyanobacterial blooms and hypereutrophic state have been typical for the shallow, urban Swarzedzkie Lake for many years. Diversion of sewage did not change its trophic status, so restoration began in autumn 2011 using the sustainable approach based on three methods. The aim of the study was to analyse how sustainable restoration affects zooplankton. We hypothesised that bottom-up and top-down methods reconstructed zooplankton composition. Thus, the abundance of large-size cladocerans increased and controlled phytoplankton effectively. The elimination of cyanobacteria bloom, the decrease of rotifer abundance and the twofold increase of filter-feeder effectiveness were observed in summer 2012. However, high phosphorus concentration, lack of regular cyprinid removal and insufficient fish stocking together with high temperature prevented zooplankton from controlling cyanobacteria bloom in summer 2013. Rotifer domination with high trophy species was noted, as before restoration. The number of rotifers decreased in 2014, while crustaceans increased due to the significant decrease of nutrient concentrations and an intensification of biomanipulation treatments. Therefore, summer phytoplankton growth was low, without cyanobacteria dominance. The rebuilding of zooplankton in Swarzedzkie Lake was observed during sustainable restoration. However, the treatments should be intensified when adverse changes were observed to obtain better results for the improvement of water quality.

Water quality and phytoplankton structure changes under the influence of effective microorganisms (EM) and barley straw - Lake restoration case study.

Many lakes worldwide, especially shallow, experience great changes due to eutrophication, manifested in severe, usually toxic water blooms, disqualifying them from recreation. In order to improve water quality, restoration programs are implemented, including numerous methods. Intense nutrient cycling resulting from detrimental role of sediments impede obtaining of clear water state. One of the restoration methods proposed in recent years was Effective Microorganisms (EM), i.e. the set of microorganisms aiming at the inhibition of harmful bacteria through competitive exclusion. This approach was introduced in shallow Konin Lake (Western Poland), suffering from severe cyanobacterial water blooms. Prior to the treatment, protective action was conducted i.e. the elimination of external nutrient loads with backwater from the river. Changes in water chemistry, phytoplankton structure and macrophytes distribution were noted during the 5-year studies (2011-2015), covering the treatment (2013-2015) as well as two previous years. Oscillatoriacean cyanobacteria were most abundant in (2011-2012), while Nostocales in summer 2014-2015, as a result of decreased phosphorus but increased nitrogen concentrations. Slight increase in Cladoceran zooplankton was observed, but none in submerged macrophytes due to low water transparency. EM application initiated positive changes in the ecosystem by means of excessive organic matter decomposition and increased diversity of phytoplankton, nevertheless cyanobacteria blooms were still present due to high nutrient content.

Temperature Effects Explain Continental Scale Distribution of Cyanobacterial Toxins.

Insight into how environmental change determines the production and distribution of cyanobacterial toxins is necessary for risk assessment. Management guidelines currently focus on hepatotoxins (microcystins). Increasing attention is given to other classes, such as neurotoxins (e.g., anatoxin-a) and cytotoxins (e.g., cylindrospermopsin) due to their potency. Most studies examine the relationship between individual toxin variants and environmental factors, such as nutrients, temperature and light. In summer 2015, we collected samples across Europe to investigate the effect of nutrient and temperature gradients on the variability of toxin production at a continental scale. Direct and indirect effects of temperature were the main drivers of the spatial distribution in the toxins produced by the cyanobacterial community, the toxin concentrations and toxin quota. Generalized linear models showed that a Toxin Diversity Index (TDI) increased with latitude, while it decreased with water stability. Increases in TDI were explained through a significant increase in toxin variants such as MC-YR, anatoxin and cylindrospermopsin, accompanied by a decreasing presence of MC-LR. While global warming continues, the direct and indirect effects of increased lake temperatures will drive changes in the distribution of cyanobacterial toxins in Europe, potentially promoting selection of a few highly toxic species or strains.

The biodegradation of microcystins in temperate freshwater bodies with previous cyanobacterial history.

Cyanobacterial blooms and cyanotoxins occur in freshwater lakes and reservoirs all over the world. Bacterial degradation of microcystins (MC), hepatotoxins produced by several cyanobacterial species, has also been broadly documented. However, information regarding MC biodegradation in European water bodies is very limited. In this paper, the occurrence and identification of MC biodegradation products was documented for 21 European lakes and reservoirs, many of which have well-documented cyanobacterial bloom histories. Varying cyanobacterial abundance and taxonomical composition were documented and MC producers were found in all the analysed samples. Planktothrix agardhii was the most common cyanobacterial species and it formed mass occurrences in four lakes. MC biodegradation was observed in 86% of the samples (18 out of 21), and four products of dmMC-LR decomposition were detected by HPLC and LC-MS methods. The two main products were cyclic dmMC-LR with modifications in the Arg-Asp-Leu region; additionally one product was recognized as the tetrapeptide Adda-Glu-Mdha-Ala. The composition of the detected products suggested a new biochemical pathway of MC degradation. The results confirmed the hypothesis that microcystin biodegradation is a common phenomenon in central European waters and that it may occur by a mechanism which is different from the one previously reported. Such a finding implies the necessity to develop a more accurate methodology for screening bacteria with MC biodegradation ability. Furthermore, it warrants new basic and applied studies on the characterization and utilization of new MC-degrading strains and biodegradation pathways.

Cyanobacteria blooms before and during the restoration process of a shallow urban lake.

Swarzedzkie Lake (near Poznan) has been heavily polluted. To improve the water quality, the restoration of lake by three methods: aeration, phosphorus inactivation using small doses of iron sulphate and magnesium chloride (FeSO4 and MgCl2) and biomanipulation was initiated at the end of 2011. The aim of the present study was to determine whether sustainable restoration has a significant impact on phytoplankton, especially cyanobacterial blooms in a shallow, urban, degraded lake. Therefore, phytoplankton and the physico-chemical parameters of water at the summer thermal stratification and autumn water mixing before (2011) and during restoration (2012-2014) was studied. Samples were collected at the deepest place of the lake in depth profile, every 1 m. Phytoplankton samples were preserved with Lugol's solution. The phytoplankton was counted using a Sedgewick-Rafter chamber with a volume of 0.46 ml. Measurements of water temperature were made in the field with a YSI multiparameter meter, transparency - using a Secchi disk. Concentrations of nitrogen, phosphorus and chlorophyll a were analysed in the laboratory according to Polish standards. As a result of restoration the water quality of the lake has improved. Cyanobacteria had almost disappeared during the first year of restoration, however, a short bloom was observed (dominated by Pseudanabeana limnetica) in the second year. The main reason for this reappearance was a higher water temperature stimulating cyanobacteria growth, but an increased supply of phosphorus from the bottom sediments also contributed. A decrease in the temperature in the third year of restoration limited the growth of cyanobacteria again. Although the decrease in the phosphorus concentration as a result of restoration proved to be sufficient for average climatic conditions, it is highly likely to be more intense in the case of increased water temperature caused by global warming.