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1.
Nat Commun ; 13(1): 5923, 2022 Oct 07.
Artigo em Inglês | MEDLINE | ID: mdl-36207297

RESUMO

Covalency involving the 5f orbitals is regularly invoked to explain the reactivity, structure and spectroscopic properties of the actinides, but the ionic versus covalent nature of metal-ligand bonding in actinide complexes remains controversial. The tetrakis 2,6-di-tert-butylphenoxide complexes of Th, U and Np form an isostructural series of crystal structures containing approximately tetrahedral MO4 cores. We show that up to 3 GPa the Th and U crystal structures show negative linear compressibility as the OMO angles distort. At 3 GPa the angles snap back to their original values, reverting to a tetrahedral geometry with an abrupt shortening of the M-O distances by up to 0.1 Å. The Np complex shows similar but smaller effects, transforming above 2.4 GPa. Electronic structure calculations associate the M-O bond shortening with a change in covalency resulting from increased contributions to the M-O bonding by the metal 6d and 5f orbitals, the combination promoting MO4 flexibility at little cost in energy.

2.
Nat Commun ; 13(1): 3931, 2022 Jul 07.
Artigo em Inglês | MEDLINE | ID: mdl-35798750

RESUMO

A range of reasons has been suggested for why many low-coordinate complexes across the periodic table exhibit a geometry that is bent, rather a higher symmetry that would best separate the ligands. The dominating reason or reasons are still debated. Here we show that two pyramidal UX3 molecules, in which X is a bulky anionic ligand, show opposite behaviour upon pressurisation in the solid state. UN″3 (UN3, N″ = N(SiMe3)2) increases in pyramidalization between ambient pressure and 4.08 GPa, while U(SAr)3 (US3, SAr = S-C6H2-tBu3-2,4,6) undergoes pressure-induced planarization. This capacity for planarization enables the use of X-ray structural and computational analyses to explore the four hypotheses normally put forward for this pyramidalization. The pyramidality of UN3, which increases with pressure, is favoured by increased dipole and reduction in molecular volume, the two factors outweighing the slight increase in metal-ligand agostic interactions that would be formed if it was planar. The ambient pressure pyramidal geometry of US3 is favoured by the induced dipole moment and agostic bond formation but these are weaker drivers than in UN3; the pressure-induced planarization of US3 is promoted by the lower molecular volume of US3 when it is planar compared to when it is pyramidal.

3.
J Chem Phys ; 154(11): 114502, 2021 Mar 21.
Artigo em Inglês | MEDLINE | ID: mdl-33752367

RESUMO

Ice III is a hydrogen-disordered phase of ice that is stable between about 0.2 and 0.35 GPa. Upon cooling, it transforms to its hydrogen-ordered counterpart ice IX within the stability region of ice II. Here, the effect of ammonium fluoride doping on this phase transition is investigated, which is followed for the first time with in situ neutron diffraction. The a and c lattice constants are found to expand and contract, respectively, upon hydrogen ordering, yielding an overall negative volume change. Interestingly, the anisotropy in the lattice constants persists when ice IX is fully formed, and negative thermal expansion is observed. Analogous to the isostructural keatite and ß-spodumenes, the negative thermal expansion can be explained through the buildup of torsional strain within the a-b plane as the helical "springs" within the structure expand upon heating. The reversibility of the phase transition was demonstrated upon heating. As seen in diffraction and Raman spectroscopy, the ammonium fluoride doping induces additional residual hydrogen disorder in ice IX and is suggested to be a chemical way for the "excitation" of the configurational ice-rules manifold. Compared to ice VIII, the dopant-induced hydrogen disorder in ice IX is smaller, which suggests a higher density of accessible configurational states close to the ground state in ice IX. This study highlights the importance of dopants for exploring the water's phase diagram and underpins the highly complex solid-state chemistry of ice.

4.
Phys Chem Chem Phys ; 22(29): 16804-16812, 2020 Aug 07.
Artigo em Inglês | MEDLINE | ID: mdl-32662500

RESUMO

Covalency is complex yet central to our understanding of chemical bonding, particularly in the actinide series. Here we assess covalency in a series of isostructural d and f transition element compounds M(OC6H5)4 (M = Ti, Zr, Hf, Ce, Th, Pa, U, Np) using scalar relativistic hybrid density functional theory in conjunction with the Natural Bond Orbital (NBO), quantum theory of atoms in molecules (QTAIM) and interacting quantum atoms (IQA) approaches. The IQA exchange-correlation covalency metric is evaluated for the first time for actinides other than uranium, in order to assess its applicability in the 5f series. It is found to have excellent correlation with NBO and QTAIM covalency metrics, making it a promising addition to the computational toolkit for analysing metal-ligand bonding. Our range of metrics agree that the actinide-oxygen bonds are the most covalent of the elements studied, with those of the heavier group 4 elements the least. Within the early actinide series, Th stands apart from the other three elements considered, being consistently the least covalent.

5.
J Phys Chem A ; 124(24): 5015-5022, 2020 Jun 18.
Artigo em Inglês | MEDLINE | ID: mdl-32441526

RESUMO

Carbon and ice make up a substantial proportion of our universe. Recent space exploration has shown that these two chemical species often coexist such as on comets and asteroids and in the interstellar medium. Here, we prepare mixtures of C60 fullerene and H2O by vapor codeposition at 90 K with molar C60/H2O ratios ranging from 1:1254 to 1:5. The C60 percolation threshold is found between the 1:132 and 1:48 samples, corresponding to a transition from matrix-isolated C60 molecules to percolating C60 domains that confine H2O. Below this threshold, the crystallization and thermal desorption properties of H2O are not significantly affected by C60, whereas the crystallization temperature of H2O is shifted toward higher temperatures for the C60-rich samples. These C60-rich samples also display exotherms corresponding to the crystallization of C60 as the two components undergo phase separation. More than 60 vol % C60 is required to significantly affect the desorption properties of H2O. A thick blanket of C60 on top of pure amorphous ice is found to display large cracks due to water desorption. These findings may help us to understand the recently observed unusual surface features and the H2O weather cycle on the 67P/Churyumov-Gerasimenko comet.

6.
J Chem Phys ; 151(13): 134505, 2019 Oct 07.
Artigo em Inglês | MEDLINE | ID: mdl-31594355

RESUMO

Vapor-deposited amorphous ice, traditionally called amorphous solid water (ASW), is one of the most abundant materials in the universe and a prototypical material for studying physical vapor-deposition processes. Its complex nature arises from a strong tendency to form porous structures combined with complicated glass transition, relaxation, and desorption behavior. To gain further insights into the various gas-trapping environments that exist in ASW and hence its morphology, films in the 25-100 µm thickness range were codeposited with small amounts of gaseous "nanoprobes" including argon, methane, helium, and carbon dioxide. Upon heating in the 95-185 K temperature range, three distinct desorption processes are observed which we attribute to the gas desorption out of open cracks above 100 K, from internal voids that collapse due to the glass transition at ∼125 K and finally from fully matrix-isolated gas induced by the irreversible crystallization to stacking disordered ice (ice Isd) at ∼155 K. Nanoscale films of ASW have only displayed the latter desorption process which means that the first two desorption processes arise from the macroscopic dimensions of our ASW films. Baffling the flow of water vapor toward the deposition plate greatly reduces the first desorption feature, and hence the formation of cracks, but it significantly increases the amount of matrix-isolated gas. The complex nature in which ASW can trap gaseous species is thought to be relevant for a range of cosmological processes.

7.
Dalton Trans ; 48(9): 2939-2947, 2019 Feb 26.
Artigo em Inglês | MEDLINE | ID: mdl-30720806

RESUMO

A series of compounds M(OC6H5)4 (M = Ti, Zr, Hf, Ce, Th, U) is studied with hybrid density functional theory, to assess M-O bond covalency. The series allows for the comparison of d and f element compounds that are structurally similar. Two well-established analysis methods are employed: Natural Bond Orbital and the Quantum Theory of Atoms in Molecules. A consistent pattern emerges; the U-O bond is the most covalent, followed by Ce-O and Th-O, with those involving the heavier transition metals the least so. The covalency of the Ti-O bond differs relative to Ce-O and Th-O, with the orbital-based method showing greater relative covalency for Ti than the electron density-based methods. The deformation energy of r(M-O) correlates with the d orbital contribution from the metal to the M-O bond, while no such correlation is found for the f orbital component. f orbital involvement in M-O bonding is an important component of covalency, facilitating orbital overlap and allowing for greater expansion of the electrons, thus lowering their kinetic energy.

8.
J Chem Phys ; 147(14): 144501, 2017 Oct 14.
Artigo em Inglês | MEDLINE | ID: mdl-29031263

RESUMO

We present experimental and simulated 2D IR spectra of some high-pressure forms of isotope-pure D2O ice and compare the results to those of ice Ih published previously [F. Perakis and P. Hamm, Phys. Chem. Chem. Phys. 14, 6250 (2012); L. Shi et al., ibid. 18, 3772 (2016)]. Ice II, ice V, and ice XIII have been chosen for this study, since this selection covers many aspects of the polymorphism of ice. That is, ice II is a hydrogen-ordered phase of ice, in contrast to ice Ih, while ice V and ice XIII are a hydrogen-disordered/ordered couple that shares essentially the same oxygen structure and hydrogen-bonded network. For the transmission 2D IR spectroscopy, a novel method had to be developed for the preparation of ultrathin films (1-2 µm) of high-pressure ices with good optical quality. We also simulated 2D IR spectra based on molecular dynamics simulations connected to a vibrational exciton picture. These simulations agree with the experimental results in a semi-quantitative manner for ice II, while the same approach failed for ice V and ice XIII. From the perspective of 2D IR spectroscopy, ice II appears to be more inhomogeneously broadened than ice Ih, despite its hydrogen-order, which we attribute to the fact that ice II is structurally more complex with four distinguishable hydrogen bonds that mix due to exciton coupling. Ice V and ice XIII, on the other hand, behave as expected with the hydrogen-disordered case (ice V) being more inhomogenously broadened. Furthermore, in all hydrogen-ordered forms (ice II and ice XIII), cross peaks could be identified in the anisotropic 2D IR spectrum, whose signs reveal the relative direction of the corresponding excitonic states.

9.
J Phys Chem Lett ; 8(7): 1645-1650, 2017 Apr 06.
Artigo em Inglês | MEDLINE | ID: mdl-28323429

RESUMO

The structural nature of high-density amorphous ice (HDA), which forms through low-temperature pressure-induced amorphization of the "ordinary" ice I, is heavily debated. Clarifying this question is important for understanding not only the complex condensed states of H2O but also in the wider context of pressure-induced amorphization processes, which are encountered across the entire materials spectrum. We first show that ammonium fluoride (NH4F), which has a similar hydrogen-bonded network to ice I, also undergoes a pressure collapse upon compression at 77 K. However, the product material is not amorphous but NH4F II, a high-pressure phase isostructural with ice IV. This collapse can be rationalized in terms of a highly effective mechanism. In the case of ice I, the orientational disorder of the water molecules leads to a deviation from this mechanism, and we therefore classify HDA as a "derailed" state along the ice I to ice IV pathway.

10.
J Chem Phys ; 145(20): 204501, 2016 Nov 28.
Artigo em Inglês | MEDLINE | ID: mdl-27908115

RESUMO

The D2O ice VI to ice XV hydrogen ordering phase transition at ambient pressure is investigated in detail with neutron diffraction. The lattice constants are found to be sensitive indicators for hydrogen ordering. The a and b lattice constants contract whereas a pronounced expansion in c is found upon hydrogen ordering. Overall, the hydrogen ordering transition goes along with a small increase in volume, which explains why the phase transition is more difficult to observe upon cooling under pressure. Slow-cooling ice VI at 1.4 GPa gives essentially fully hydrogen-disordered ice VI. Consistent with earlier studies, the ice XV obtained after slow-cooling at ambient pressure is best described with P-1 space group symmetry. Using a new modelling approach, we achieve the atomistic reconstruction of a supercell structure that is consistent with the average partially ordered structure derived from Rietveld refinements. This shows that C-type networks are most prevalent in ice XV, but other structural motifs outside of the classifications of the fully hydrogen-ordered networks are identified as well. The recently proposed Pmmn structural model for ice XV is found to be incompatible with our diffraction data, and we argue that only structural models that are capable of describing full hydrogen order should be used.

11.
J Chem Phys ; 144(20): 204502, 2016 May 28.
Artigo em Inglês | MEDLINE | ID: mdl-27250311

RESUMO

Low-density amorphous (LDA) ice is involved in critical cosmological processes and has gained prominence as one of the at least two distinct amorphous forms of ice. Despite these accolades, we still have an incomplete understanding of the structural diversity that is encompassed within the LDA state and the dynamic processes that take place upon heating LDA. Heating the high-pressure ice VIII phase at ambient pressure is a remarkable example of temperature-induced amorphisation yielding LDA. We investigate this process in detail using X-ray diffraction and Raman spectroscopy and show that the LDA obtained from ice VIII is structurally different from the more "traditional" states of LDA which are approached upon thermal annealing. This new structural relaxation pathway involves an increase of structural order on the intermediate range length scale. In contrast with other LDA materials the local structure is more ordered initially and becomes slightly more disordered upon annealing. We also show that the cascade of phase transitions upon heating ice VIII at ambient pressure includes the formation of ice IX which may be connected with the structural peculiarities of LDA from ice VIII. Overall, this study shows that LDA is a structurally more diverse material than previously appreciated.

12.
J Phys Chem Lett ; 5(14): 2469-73, 2014 Jul 17.
Artigo em Inglês | MEDLINE | ID: mdl-26277817

RESUMO

There is a growing realization that the presence of stacking disorder in ice I strongly influences its physical and chemical properties. Using Raman spectroscopy, we gain new fundamental insights into the spectroscopic properties of ice. We show that stacking disorder can be detected and quantified by comparing the spectra of stacking disordered ice with spectra of the "ordinary" hexagonal ice Ih. The spectral signature of stacking disorder is thought to arise from a greater structural diversity on the local length scale, vibrational modes that appear due to the lower-symmetry environments, and a strengthening of the covalent bonds. Our findings are compared to results from diffraction and calorimetry, and we discuss the advantages and disadvantages of the three techniques with respect to detecting stacking disorder in ice I. Apart from characterizing stacking disordered ice in the research lab, our new method is perfectly suited for remote or telescopic applications aiming at the identification of stacking disordered ice in nature.

13.
Langmuir ; 26(11): 8659-65, 2010 Jun 01.
Artigo em Inglês | MEDLINE | ID: mdl-20415441

RESUMO

The influence on cell hydrophobicity of differential extension with ionic strength of lipopolysaccharide molecules (LPS), which exist as charged and uncharged polymers at the surface of the gram-negative bacterium Pseudomonas aeruginosa (PA01), has been investigated. Attenuated total reflection infrared (ATR-IR) spectral absorptions from a single layer of cells adsorbed to ZnSe increased in intensity with increasing NaCl concentration up to 0.1 mol L(-1). Dynamic contact angle measurements (Wilhelmy plate tensiometry) made with a ZnSe plate having an adsorbed cell layer and the adherence of the cells to hexadecane suggest that PA01 cells were most hydrophobic in contact with 0.1 mol L(-1) NaCl solutions. These data indicate a charge screening induced compression of the charged LPS polymers decreasing the cell-surface approach distance and increasing the cell hydrophobicity due to the greater surface predominance of the uncharged LPS polymers. Interestingly, adsorbed cell layers in 0.3 mol L(-1) NaCl had a lower IR absorption intensity, and PA01 cells suspended in 0.3 mol L(-1) were found to be more hydrophilic, indicating that other factors influence the cell-surface approach distance and hydrophobicity. The examination of cell electrophoretic mobility variation with NaCl concentration suggests that the compression of charged polysaccharides increases the polysaccharide charge density and may also reduce the flow of liquid through the polysaccharide layer affecting the effective potential at the interface, the cell hydrophobicity, and the cell-surface approach distance.


Assuntos
Aderência Bacteriana , Pseudomonas aeruginosa/fisiologia , Cloreto de Sódio/farmacologia , Adsorção , Ensaio de Desvio de Mobilidade Eletroforética , Pseudomonas aeruginosa/crescimento & desenvolvimento , Espectrofotometria Infravermelho/métodos
14.
Langmuir ; 26(6): 4048-56, 2010 Mar 16.
Artigo em Inglês | MEDLINE | ID: mdl-19928841

RESUMO

A ligand with a bisphosphonate headgroup and methyl-terminated poly(ethylene oxide) 550 tail has been adsorbed to a boehmite (AlOOH) particle film from aqueous solutions at 9, 18, 26, and 40 degrees C with a range of coverages. In situ attenuated total reflectance infrared (ATR-IR) spectra of the PEO-modified boehmite particle films has been used to monitor surface coverage. PEO-related IR absorptions showed variation in band shape with coverage and temperature which reflect changes in the configuration and crowding of PEO ligand tails. The integrated absorbance of PEO-related absorptions arising from CH(2) wagging and twisting vibrations indicated the average conformation about the C-C and C-O bonds. At all values of coverage and temperature, the PEO tails of the PEO-phosphonate ligands were found to have a predominantly gauche conformation about C-C bonds and a predominantly trans conformation about C-O bonds. The proportion of PEO with this predominant configuration, termed TGT, was found to vary with coverage and temperature and was most prevalent for PEO-modified boehmite surfaces with a ligand coverage of approximately 0.95 at 18 degrees C. Dynamic water contact angle measurements showed that PEO-modified surfaces with the greatest proportion of PEO in the TGT configuration were also the most hydrophilic, thus indicating that PEO in the TGT configuration was more hydrated or polar than other configurations. Variation in the proportion of PEO in the TGT configuration with temperature and coverage have been used to explain the variable resistance to protein adhesion reported for PEO-modified surfaces. Factors influencing the configuration of surface-bound PEO with changes in ligand coverage and temperature have been discussed.


Assuntos
Hidróxido de Alumínio/química , Óxido de Alumínio/química , Organofosfonatos/química , Polietilenoglicóis/química , Ligantes , Microscopia Eletrônica de Varredura , Estrutura Molecular , Soluções , Espectrofotometria Infravermelho , Água
15.
J Phys Chem B ; 113(43): 14229-38, 2009 Oct 29.
Artigo em Inglês | MEDLINE | ID: mdl-19799394

RESUMO

Infrared absorption spectra of aqueous mixtures of poly(ethylene oxide) dimethyl ether (PEO), with a number average molecular weight of 500 and a water volume fraction between 0 and 0.96 have been recorded at 18, 26, and 40 degrees C. Composition and temperature were found to influence the intensity and wavenumber of PEO-related absorptions. Spectral band fitting of the CH(2) wagging/twisting region of the spectra showed that the proportion of gauche and trans conformers of the C-C and C-O bonds varied with composition. Principal component analysis (PCA) of the PEO-related absorptions showed that the configuration with a gauche conformation about the C-C bond and trans conformation about the C-O bond was favored at all the compositions and temperatures tested but was decreasingly favored as the temperature was increased. PCA also enabled the assignment of spectral features associated with a specific conformation of either the C-C or C-O bond. Water-related O-H stretching absorptions indicated that hydrogen bonds were formed between water and PEO ether oxygen atoms. Variation in the wavenumber and integrated absorbance of band-fitted contributions to the water O-H stretching region suggest that the degree of water-water hydrogen bonding changes with composition. At water volume fractions between 0.2 and 0.6, almost all of the water appeared to be strongly hydrogen bonded. The smallest infrared absorption intensity from weakly hydrogen bonded water was recorded for mixtures with a water volume fraction of around 0.4. Such PEO-water mixtures had the greatest proportion of trans conformers about the C-O bond, and there were unexpectedly large PEO and water absorption intensities. Correlations between the average PEO configuration and the water O-H stretching absorptions suggest that, while the conformation about the C-C bond was mainly determined by the polarity of the mixture, the conformation about the C-O bond was influenced by the formation of a strongly hydrogen bonded PEO-water network.

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