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1.
J Immunol Methods ; 516: 113458, 2023 05.
Artigo em Inglês | MEDLINE | ID: mdl-36921710

RESUMO

Metalloproteases derived from microbial pathogens are important virulence factors contributing to evasion of antimicrobial mechanisms of the innate immune system. Karilysin is a metalloprotease recently discovered in the periodonto-pathogen Tanneralla forsythia and currently no monoclonal antibodies exist against karilysin, which is a gap in the molecular toolbox for structure-function studies of karilysin. In this study we have used phage display for fast selection of single domain antibodies (VHs) towards the karilysin catalytic domain (Kly18) using a human domain library based on a VH framework. Following five panning rounds, phage clones were sequenced, and three unique sequences were identified (termed Kly18-VHI-III). Initial screens identified Kly18-VHII-phage as capable of inhibiting Kly18 proteolytic activity. The free Kly18-VHII was expressed in the periplasmic space of BL21 E. coli using the pET22b (+) vector and purified by IMAC and the inhibition capacity of purified Kly18-VHII was confirmed. The data presented in this study provides input to the molecular toolbox for the study of karilysin and Kly18-VHII could serve as a lead molecule for development of a karilysin-specific inhibitor.


Assuntos
Bacteriófagos , Anticorpos de Domínio Único , Humanos , Tannerella forsythia , Fatores de Virulência/genética , Anticorpos de Domínio Único/genética , Metaloproteinases da Matriz , Escherichia coli , Bacteriófagos/genética , Biblioteca de Peptídeos
2.
J Immunol Methods ; 502: 113214, 2022 03.
Artigo em Inglês | MEDLINE | ID: mdl-34998814

RESUMO

BACKGROUND: Therapeutic antibodies and Fc-conjugates are becoming increasingly popular for disease management and accurate and sensitive pharmacokinetic measurements are critical in lead candidate selection in pre-clinical drug discovery. METHODS AND STUDY DESIGN: Human Fc-specific intact monoclonal antibodies, polyclonal antibodies, Fab fragments, aptamers, affibodies and nanobodies were screened for potential as biotinylated capture moieties in a microfluidic assay. Test compounds were Bevacizumab, Rituximab, Infliximab as well as an in-house IgG1.1 and an IgG1-drug conjugate. RESULTS: Capture molecules were tested for specificity in plasma matrices from beagle dog, rat, mouse, pig, rhesus monkey and cynomolgus monkey. We find that the llama nanobody provides the best selectivity across across species. The assay usability were verified in cynomolgus monkey pharmacokinetic studies of in-house IgG1.1 and IgG1-fusion molecules. CONCLUSION: The presented generic nanobody-based assay may find relevance in preclinical testing of future human Fc-containing drug conjugates devoid of Fab fragments and intact monoclonal antibodies.


Assuntos
Antineoplásicos Imunológicos , Imunoglobulina G , Animais , Anticorpos Monoclonais , Cães , Humanos , Fragmentos Fab das Imunoglobulinas , Fragmentos Fc das Imunoglobulinas , Macaca fascicularis , Camundongos , Microfluídica , Ratos , Suínos
3.
Am J Hum Biol ; 33(3): e23501, 2021 05.
Artigo em Inglês | MEDLINE | ID: mdl-32902062

RESUMO

OBJECTIVES: Previous studies have suggested that acute exercise-induced cardiac and kidney damage following ultra-distance running is low in Mexican Tarahumara even though C-reactive protein (CRP) remained elevated 24 hours post-race. We aimed to study if the plasma biomarker, soluble urokinase-type plasminogen activator receptor (suPAR), could replace or complement CRP as a systemic inflammation biomarker in Tarahumara men and women following ultra-distance running. METHODS: Plasma samples were collected pre-race and at three to six different time points post-race in Mexican Tarahumara competing in three independent ultramarathons; men running 78 km (GroupI, n = 9), women running 52 km (GroupII, n = 3), and men running 63 km (GroupIII, n = 10). Baseline anthropometry, blood pressure, glycated hemoglobin, and hemoglobin were measured, aerobic fitness was estimated by submaximal step test, absolute and relative running intensity assessed using combined heart rate and accelerometry. Plasma was collected pre- and post-race to analyze concentrations of suPAR, and-for women only-a panel of inflammatory, cardiac and kidney plasma biomarkers. Mixed-effect models were used to evaluate the effect of ultramarathon running on plasma suPAR concentrations. RESULTS: Compared to pre-race values, suPAR was significantly elevated in plasma <5 minutes after the three ultramarathon races (70%-109% increase of the mean for the three groups). Furthermore, plasma suPAR remained significantly elevated up to 6 hours post-race for all three groups of runners independent of running intensity. CONCLUSIONS: The results suggest that suPAR can complement, but not replace CRP following ultra-distance running in Tarahumara men and women.


Assuntos
Indígenas Norte-Americanos/estatística & dados numéricos , Inflamação/metabolismo , Receptores de Ativador de Plasminogênio Tipo Uroquinase/metabolismo , Corrida/fisiologia , Adulto , Biomarcadores/sangue , Feminino , Humanos , Masculino , México , Pessoa de Meia-Idade , Plasma/química , Adulto Jovem
4.
J Immunol Methods ; 469: 26-32, 2019 06.
Artigo em Inglês | MEDLINE | ID: mdl-30880264

RESUMO

Tannerella forsythia is a gram-negative anaerobic bacterium that is associated with the development of destructive periodontal disease. T. forsythia secretes the metalloprotease-like enzyme karilysin. Using in vitro systems karilysin has been shown to modulate the host immune response by degradation of complement system proteins and by inactivation of the antimicrobial peptide LL-37 by proteolytic cleavage. This makes karilysin a highly interesting virulence factor to study in the framework of drug development and diagnostics. However, to date the presence of karilysin in clinical samples has not been demonstrated due to the lack of specific probes. In the present work, a high titer and stable affinity-purified avian IgY antibody against karilysin was developed. By surface plasmon resonance imaging the IgY affinity was found to be in the low nanomolar range. The antibody could be used to detect karilysin in saliva samples by immuno-blotting and was specific when tested towards human MMP-3. Furthermore, an avian IgY-based immunoassay was developed, which demonstrated low intra- and interday assay variability (CV's below 10%). Application of the immunoassay on a well-characterized set of saliva samples from adolescents with or without signs of periodontitis showed that it was possible to detect karilysin in saliva. A significant difference in karilysin concentration was found between saliva from participants with signs of periodontitis and saliva from healthy controls (p = .0024). The median of karilysin levels among periodontitis cases was 957 pg/ml (IQR, 499-2132 pg/ml) and the median for controls was 569 pg/ml (IQR, 210-1343 pg/ml). Collectively our data confirm the presence of karilysin in clinical samples. The described IgY-based immunoassay may prove useful as part of protein-based biomarker screenings in the clinic or in point-of care settings.


Assuntos
Anticorpos Antibacterianos/imunologia , Proteínas de Bactérias/fisiologia , Ensaio de Imunoadsorção Enzimática , Infecções por Bactérias Gram-Negativas/diagnóstico , Imunoglobulinas/imunologia , Metaloproteinases da Matriz/imunologia , Periodontite/diagnóstico , Saliva/microbiologia , Tannerella forsythia/imunologia , Fatores de Virulência/imunologia , Adolescente , Especificidade de Anticorpos , Proteínas de Bactérias/imunologia , Estudos de Casos e Controles , Feminino , Infecções por Bactérias Gram-Negativas/microbiologia , Humanos , Masculino , Periodontite/microbiologia , Valor Preditivo dos Testes , Reprodutibilidade dos Testes , Tannerella forsythia/patogenicidade , Virulência
5.
Cytokine ; 115: 135-141, 2019 03.
Artigo em Inglês | MEDLINE | ID: mdl-30626536

RESUMO

AIM: This study aimed to investigate the association between salivary levels of myeloperoxidase (MPO), neutrophil elastase (NE), soluble urokinase-type plasminogen activator receptor (suPAR), matrix metalloproteinase (MMP)-8 and tissue inhibitor of matrix metalloproteinases (TIMP)-1 and gingival inflammation development during an experimental gingivitis study. METHODS: A three-week experimental gingivitis study was conducted. Clinical recordings of dental plaque biofilm (Modified Quigley Hein Plaque Index, TQHPI) and gingival inflammation (Modified Gingival Index, MGI) were made at specific time points for each of the 42 participants. Salivary levels of MPO, NE, suPAR, MMP-8 and TIMP-1 at the same time points were measured using distinct immunoassays. For data analysis growth curve modelling was employed to account for the time-varying outcome (MGI score) and the time-varying covariates (salivary marker levels, and TQHPI score). Analyses were stratified according to the MGI-score trajectory groups previously identified as 'fast', respectively 'slow' responders. RESULTS: Overall, higher MGI scores were statistically significantly positively associated with higher levels of MPO, MMP-8 and TIMP-1. Stratified analysis according to inflammation development trajectory group revealed higher levels of salivary MPO, MMP-8 and MMP-8/TIMP-1 ratio among the 'fast' responders than among 'slow' responders. None of the investigated salivary protein markers was associated with a 'slow' inflammation development response. CONCLUSIONS: Salivary levels of MPO, MMP-8 and TIMP-1 were associated with the extent and severity of gingival inflammation. While the 'fast' gingival inflammation response was associated with increased levels of MPO, MMP-8 and MMP-8/TIMP-1 ratio, the 'slow' response was not associated with any of the salivary protein markers investigated in this study. Neutrophil activity seems to orchestrate a 'fast' gingival inflammatory response among participants previously primed to gingival inflammation.


Assuntos
Gengiva/metabolismo , Gengivite/metabolismo , Inflamação/metabolismo , Metaloproteinase 8 da Matriz/metabolismo , Peroxidase/metabolismo , Saliva/metabolismo , Inibidor Tecidual de Metaloproteinase-1/metabolismo , Adulto , Biomarcadores/metabolismo , Índice de Placa Dentária , Feminino , Humanos , Masculino , Índice Periodontal , Adulto Jovem
6.
Eur J Oral Sci ; 126(4): 292-299, 2018 08.
Artigo em Inglês | MEDLINE | ID: mdl-29752756

RESUMO

Owing to its molecular stability in body fluids, soluble urokinase-type plasminogen activator receptor (suPAR) is used as a biomarker for the level of systemic inflammation. This study compares the suPAR levels in serum with those in the saliva of adolescents and evaluates their association with the periodontal conditions. Adolescents identified as screen positive (n = 87) or screen negative (n = 73) for periodontitis had saliva and serum samples taken, along with subgingival plaque samples. The concentrations of suPAR were determined in saliva and serum, and 18 microbial species and the immunoglobulin response to them was evaluated. Factor analyses were used to reduce the number of variables within each of the domains of clinical, microbiological, and immunological findings. The median salivary suPAR concentration was 13.18 [(interquartile range (IQR): 6.20-23.36] µg l-1 and was not associated with the serum suPAR levels (median 2.05; IQR: 1.62-2.46 µg l-1 ). Linear regression analysis showed that the log10 (salivary suPAR concentration) was statistically significantly positively associated with the clinical phenotype 'Periodontitis Extent' (ß = 0.28; 95% CI: 0.16-0.39) along with 'Putative periodontopathogens' (ß = 0.65; 95% CI: 0.51-0.79). The study represents the first determination of salivary suPAR concentration in a larger well-defined adolescent population. Our results suggest the potential for clinical use of suPAR in saliva as an inflammatory risk indicator/biomarker of periodontitis.


Assuntos
Periodontite/enzimologia , Receptores de Ativador de Plasminogênio Tipo Uroquinase/metabolismo , Adolescente , Chile , Placa Dentária/enzimologia , Placa Dentária/microbiologia , Análise Fatorial , Feminino , Humanos , Imunoglobulina G/sangue , Masculino , Periodontite/microbiologia , Saliva/enzimologia , Adulto Jovem
7.
J Mol Graph Model ; 76: 305-312, 2017 09.
Artigo em Inglês | MEDLINE | ID: mdl-28779687

RESUMO

Porphyromonas gingivalis is a major periodontitis-causing pathogens. P. gingivalis secrete a cysteine protease termed RgpB, which is specific for Arg-Xaa bonds in substrates. Recently, a nanobody-based assay was used to demonstrate that RgpB could represent a novel diagnostic target, thereby simplifying. P. gingivalis detection. The nanobody, VHH7, had a high binding affinity and was specific for RgpB, when tested towards the highly identical RgpA. In this study a homology model of VHH7 was build. The complementarity determining regions (CDR) comprising the paratope residues responsible for RgpB binding were identified and used as input to the docking. Furthermore, residues likely involved in the RgpB epitope was identified based upon RgpB:RgpA alignment and analysis of residue surface accessibility. CDR residues and putitative RgpB epitope residues were used as input to an information-driven flexible docking approach using the HADDOCK server. Analysis of the VHH7:RgpB model demonstrated that the epitope was found in the immunoglobulin-like domain and residue pairs located at the molecular paratope:epitope interface important for complex stability was identified. Collectively, the VHH7 homology model and VHH7:RgpB docking supplies knowledge of the residues involved in the high affinity interaction. This information could prove valuable in the design of an antibody-drug conjugate for specific RgpB targeting.


Assuntos
Antígenos/química , Modelos Moleculares , Conformação Molecular , Anticorpos de Domínio Único/química , Sequência de Aminoácidos , Afinidade de Anticorpos/imunologia , Antígenos/imunologia , Domínio Catalítico , Simulação de Acoplamento Molecular , Simulação de Dinâmica Molecular , Ligação Proteica , Domínios e Motivos de Interação entre Proteínas , Anticorpos de Domínio Único/imunologia , Relação Estrutura-Atividade
8.
Int J Biol Macromol ; 92: 779-787, 2016 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-27402461

RESUMO

A method for development of murine Fab fragments towards extracellular domains of a surface receptor is presented. The GluA4 ionotropic glutamate receptor is used as a model system. Recombinant GluA4 ectodomain comprising both the N-terminal domain (NTD) and the ligand-binding domain (LBD) in one molecule was used for immunization. A Fab-phage library was constructed and a parallel panning approach enabled selection of murine Fab fragments towards either intact ectodomain or the isolated LBD of the GluA4 receptor. One LBD-Fab (FabL9) showed exclusive selectivity for the GluA4 LBD, over a panel of LBDs from GluA2, GluK1, GluK2 and GluD2. Soluble FabL9 was produced in amounts suitable for characterization. Competitive ELISA and rat-brain immunoprecipitation experiments confirmed that the FabL9 epitope is conserved in the LBD and in the intact native receptor. By an alignment of GluA2 and GluA4, the likely binding epitope for FabL9 was predicted. This study demonstrates a simple approach for development of antibody fragments towards specific sub-domains of a large ligand-gated ion channel, and this method could be utilized for all multi-domain surface receptors where antibody domain-selectivity may be desirable. Furthermore, we present for the first time a GluA4 subtype-specific murine Fab fragment targeting the LBD of the receptor.


Assuntos
Epitopos/química , Fragmentos Fab das Imunoglobulinas/isolamento & purificação , Biblioteca de Peptídeos , Receptores de AMPA/química , Sequência de Aminoácidos , Animais , Encéfalo/imunologia , Encéfalo/metabolismo , Química Encefálica , Células Clonais , Ensaio de Imunoadsorção Enzimática/métodos , Epitopos/imunologia , Feminino , Imunização , Fragmentos Fab das Imunoglobulinas/biossíntese , Imunoprecipitação , Camundongos , Camundongos Endogâmicos BALB C , Domínios Proteicos , Multimerização Proteica , Ratos , Receptores de AMPA/administração & dosagem , Receptores de AMPA/imunologia , Proteínas Recombinantes/administração & dosagem , Proteínas Recombinantes/química , Proteínas Recombinantes/imunologia , Alinhamento de Sequência
9.
Mol Immunol ; 65(2): 384-90, 2015 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-25749705

RESUMO

Urokinase-type plasminogen activator (uPA) is a trypsin-like serine protease that plays a vital role in extracellular conversion of inactive plasminogen into catalytically active plasmin. Activated plasmin facilitates the release of several proteolytic enzymes, which control processes like pericellular proteolysis and remodeling of ECM. uPA and the receptor uPAR, are overexpressed in a number of malignant tumours and uPA/uPAR play major roles in adhesion, migration, invasion and metastasis of cancer cells. Elevated levels of uPA have been reported as a risk biomarker for disease relapse, increased cancer malignancy and poor survival prognosis. For these reasons uPA is considered an important target for anticancer drug therapy. In this study we isolated two camel single domain antibodies (nanobodies) from a naïve library by phage display. The nanobody sequences were sequence-optimized for Escherichia coli expression, cloned into the pET22-B(+) vector system, expressed in BL-21 cells and purified from the periplasmic fraction by IMAC. ELISA tests demonstrated that the purified nanobodies were specific for uPA when tested towards other trypsin-like serine proteases. The apparent affinities of the nanobodies were determined by competitive ELISA to 80 nM and 522 nM, respectively. The best binder did not inhibit uPA (nAb-C3), however the lowest affinity binder (nAb-C8) was able to inhibit the uPA-mediated cleavage of the substrate S-2444. The results validate the naïve library as a resource for retrieval of relevant lead molecules and the novel uPA-nanobodies can be useful pharmacological tools to study uPA structure-function relationships.


Assuntos
Especificidade de Anticorpos/genética , Expressão Gênica , Oligopeptídeos/química , Anticorpos de Domínio Único , Ativador de Plasminogênio Tipo Uroquinase , Animais , Camelus , Linhagem Celular , Biblioteca Gênica , Humanos , Anticorpos de Domínio Único/química , Anticorpos de Domínio Único/genética , Anticorpos de Domínio Único/imunologia , Ativador de Plasminogênio Tipo Uroquinase/química , Ativador de Plasminogênio Tipo Uroquinase/imunologia
10.
Artigo em Inglês | MEDLINE | ID: mdl-23695557

RESUMO

Karilysin is the only metallopeptidase identified as a virulence factor in the odontopathogen Tannerella forsythia owing to its deleterious effect on the host immune response during bacterial infection. The very close structural and sequence-based similarity of its catalytic domain (Kly18) to matrix metalloproteinases suggests that karilysin was acquired by horizontal gene transfer from an animal host. Previous studies by phage display identified peptides with the consensus sequence XWFPXXXGGG (single-letter amino-acid codes; X represents any residue) as karilysin inhibitors with low-micromolar binding affinities. Subsequent refinement revealed that inhibition comparable to that of longer peptides could be achieved using the tetrapeptide SWFP. To analyze its binding, the high-resolution crystal structure of the complex between Kly18 and SWFP was determined and it was found that the peptide binds to the primed side of the active-site cleft in a substrate-like manner. The catalytic zinc ion is clamped by the α-amino group and the carbonyl O atom of the serine, thus distantly mimicking the general manner of binding of hydroxamate inhibitors to metallopeptidases and contributing, together with three zinc-binding histidines from the protein scaffold, to an octahedral-minus-one metal-coordination sphere. The tryptophan side chain penetrates the deep partially water-filled specificity pocket of Kly18. Together with previous serendipitous product complexes of Kly18, the present results provide the structural determinants of inhibition of karilysin and open the field for the design of novel inhibitory strategies aimed at the treatment of human periodontal disease based on a peptidic hit molecule.


Assuntos
Proteínas de Bactérias/química , Bacteroidetes/enzimologia , Domínio Catalítico , Metaloproteinases da Matriz/química , Oligopeptídeos/química , Proteínas de Bactérias/metabolismo , Domínio Catalítico/fisiologia , Cristalografia por Raios X , Metaloproteinases da Matriz/metabolismo , Oligopeptídeos/metabolismo , Ligação Proteica
11.
PLoS One ; 7(10): e48537, 2012.
Artigo em Inglês | MEDLINE | ID: mdl-23119051

RESUMO

Tannerella forsythia is a gram-negative bacteria, which is strongly associated with the development of periodontal disease. Karilysin is a newly identified metalloprotease-like enzyme, that is secreted from T. forsythia. Karilysin modulates the host immune response and is therefore considered a likely drug target. In this study peptides were selected towards the catalytic domain from Karilysin (Kly18) by phage display. The peptides were linear with low micromolar binding affinities. The two best binders (peptide14 and peptide15), shared the consensus sequence XWFPXXXGGG. A peptide15 fusion with Maltose Binding protein (MBP) was produced with peptide15 fused to the N-terminus of MBP. The peptide15-MBP was expressed in E. coli and the purified fusion-protein was used to verify Kly18 specific binding. Chemically synthesised peptide15 (SWFPLRSGGG) could inhibit the enzymatic activity of both Kly18 and intact Karilysin (Kly48). Furthermore, peptide15 could slow down the autoprocessing of intact Kly48 to Kly18. The WFP motif was important for inhibition and a truncation study further demonstrated that the N-terminal serine was also essential for Kly18 inhibition. The SWFP peptide had a Ki value in the low micromolar range, which was similar to the intact peptide15. In conclusion SWFP is the first reported inhibitor of Karilysin and can be used as a valuable tool in structure-function studies of Karilysin.


Assuntos
Proteínas de Bactérias/antagonistas & inibidores , Bacteroidetes/enzimologia , Inibidores Enzimáticos/farmacologia , Peptídeos/farmacologia , Motivos de Aminoácidos , Sequência de Aminoácidos , Proteínas de Bactérias/química , Proteínas de Bactérias/metabolismo , Domínio Catalítico , Inibidores Enzimáticos/química , Cinese , Metaloproteinases da Matriz/química , Metaloproteinases da Matriz/metabolismo , Modelos Moleculares , Biblioteca de Peptídeos , Peptídeos/química , Ligação Proteica , Conformação Proteica , Proteólise/efeitos dos fármacos , Proteínas Recombinantes de Fusão/antagonistas & inibidores , Proteínas Recombinantes de Fusão/química , Proteínas Recombinantes de Fusão/metabolismo , Solubilidade
12.
Anal Biochem ; 415(2): 158-67, 2011 Aug 15.
Artigo em Inglês | MEDLINE | ID: mdl-21569755

RESUMO

Porphyromonas gingivalis is one of the major periodontitis-causing pathogens. P. gingivalis secretes a group of proteases termed gingipains, and in this study we have used the RgpB gingipain as a biomarker for P. gingivalis. We constructed a naive camel nanobody library and used phage display to select one nanobody toward RgpB with picomolar affinity. The nanobody was used in an inhibition assay for detection of RgpB in buffer as well as in saliva. The nanobody was highly specific for RgpB given that it did not bind to the homologous gingipain HRgpA. This indicated the presence of a binding epitope within the immunoglobulin-like domain of RgpB. A subtractive inhibition assay was used to demonstrate that the nanobody could bind native RgpB in the context of intact cells. The nanobody bound exclusively to the P. gingivalis membrane-bound RgpB isoform (mt-RgpB) and to secreted soluble RgpB. Further cross-reactivity studies with P. gingivalis gingipain deletion mutants showed that the nanobody could discriminate between native RgpB and native Kgp and RgpA in complex bacterial samples. This study demonstrates that RgpB can be used as a specific biomarker for P. gingivalis detection and that the presented nanobody-based assay could supplement existing methods for P. gingivalis detection.


Assuntos
Adesinas Bacterianas/análise , Anticorpos Antibacterianos/imunologia , Infecções por Bacteroidaceae/diagnóstico , Cisteína Endopeptidases/análise , Porphyromonas gingivalis/isolamento & purificação , Anticorpos de Cadeia Única/imunologia , Adesinas Bacterianas/genética , Adesinas Bacterianas/imunologia , Sequência de Aminoácidos , Infecções por Bacteroidaceae/microbiologia , Biomarcadores/metabolismo , Cisteína Endopeptidases/genética , Cisteína Endopeptidases/imunologia , Cisteína Endopeptidases Gingipaínas , Humanos , Dados de Sequência Molecular , Biblioteca de Peptídeos , Porphyromonas gingivalis/enzimologia , Ligação Proteica , Isoformas de Proteínas/química , Isoformas de Proteínas/genética , Isoformas de Proteínas/metabolismo , Proteínas Recombinantes/química , Proteínas Recombinantes/genética , Proteínas Recombinantes/metabolismo , Saliva/microbiologia
14.
Acta Biomater ; 6(10): 3936-46, 2010 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-20417734

RESUMO

Magneto-resistive sensors capable of detecting superparamagnetic micro-/nano-sized beads are promising alternatives to standard diagnostic assays based on absorbance or fluorescence and streptavidin-functionalized beads are widely used as an integral part of these sensors. Here we have developed an immunomicroarray for systematic studies of the binding properties of 10 different micro-/nano-sized streptavidin-functionalized beads to a biotin substrate immobilized on SiO(2) with or without surface modification. SiO(2) surface cleaning, immobilized substrate concentration and surface blocking conditions were optimized. Polyethylene glycol-based surfaces with different end groups on the anchor molecule, 2,4,6-trichloro-1,3,5-triazine (TsT), were synthesized and compared with the standard (3-aminopropyl)triethoxysilane (APTS)/glutaraldehyde chemistry. APTS/glutaraldehyde, directly linked TsT and bare H(2)O(2)-activated SiO(2) performed better than polyethylene glycol-modified surfaces. Two beads, Masterbeads and M-280 beads, were found to give superior results compared with other bead types. Antibody/antigen interactions, illustrated by C-reactive protein, were best performed with Masterbeads. The results provide important information concerning the surface binding properties of streptavidin-functionalized beads and the immunomicroarray can be used when optimizing the performance of bead-based biosensors.


Assuntos
Imunoensaio/métodos , Magnetismo , Análise em Microsséries/métodos , Microesferas , Técnicas Biossensoriais , Biotina/química , Biotina/metabolismo , Proteína C-Reativa/metabolismo , Teste de Materiais , Estrutura Molecular , Polietilenoglicóis/química , Soroalbumina Bovina/metabolismo , Dióxido de Silício/química , Estreptavidina/química , Estreptavidina/metabolismo , Propriedades de Superfície
15.
Biosens Bioelectron ; 24(3): 339-48, 2008 Nov 15.
Artigo em Inglês | MEDLINE | ID: mdl-18675543

RESUMO

In this paper, the recent progress within biosensors for plant pathogen detection will be reviewed. Bio-recognition layers on sensors can be designed in various ways, however the most popular approach is to immobilise antibodies for specific capture of analytes. Focus will be put on antibody surface-immobilisation strategies as well as the use of antibodies in the widely used sensors, quartz crystal microbalance, surface plasmon resonance and cantilevers. We will describe the available data on antibody-based plant pathogen detection and furthermore use examples from detection of the pathogens Salmonella, Listeria monocytogenes, Streptococcus mutans, Bacillus cereus, Bacillus anthracis, Campylobacter and Escherichia coli. We will touch upon optimal assay design and further discuss the strengths and limitations of current sensor technologies for detection of viruses, bacteria and fungi.


Assuntos
Anticorpos Antibacterianos/imunologia , Bactérias/isolamento & purificação , Técnicas Biossensoriais/métodos , Plantas/microbiologia , Técnicas Biossensoriais/instrumentação , Ensaio de Imunoadsorção Enzimática , Sistemas Automatizados de Assistência Junto ao Leito , Quartzo/química , Sensibilidade e Especificidade , Ressonância de Plasmônio de Superfície
16.
Mycol Res ; 111(Pt 3): 332-8, 2007 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-17350244

RESUMO

The fungal pathogen Pst causes yellow rust disease in wheat plants leading to crop losses. The organism spreads by releasing wind-dispersed urediniospores from infected plants. In this study a library of novel monoclonal antibodies (mAbs) was developed against Pst urediniospores. Nine mAb-producing cell lines were cloned and their cross-reactivities characterised against a panel of airborne fungal spores representing genera commonly found in the same environment as Pst. Two specific mAbs were used to develop a competitive ELISA (Pst mAb4) and a subtractive inhibition ELISA (Pst mAb8). Standard curves for both assays had good intra- and interday reproducibility. The subtractive inhibition ELISA had greater sensitivity with a detection limit of 1.5 x 10(5) spores ml(-1). Cross-reactivity studies of Pst mAb8 in the subtractive inhibition ELISA, showed reaction with other Puccinia spores only, suggesting that common epitopes exist within this genus. The biosensor-compatible Pst mAb8 assay principle developed in this study has the potential to be implemented in future 'label-free' in-the-field systems for Pst detection.


Assuntos
Anticorpos Antifúngicos/imunologia , Anticorpos Monoclonais/imunologia , Basidiomycota/imunologia , Animais , Anticorpos Antifúngicos/biossíntese , Anticorpos Monoclonais/biossíntese , Especificidade de Anticorpos , Epitopos/imunologia , Camundongos , Camundongos Endogâmicos BALB C , Doenças das Plantas/microbiologia , Esporos Fúngicos/imunologia , Triticum/microbiologia
17.
J Microbiol Methods ; 68(3): 507-15, 2007 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-17157943

RESUMO

Phytophthora infestans is the cause of late blight disease in potato and is an economically important pathogen worldwide. Early disease detection is important to implement disease control measures. In this study a surface plasmon resonance (SPR) immunosensor for detection of P. infestans sporangia is presented. The specificity of an existing mouse monoclonal antibody (phyt/G1470 mAb) against P. infestans was investigated in plate-trapped antigen ELISA and in subtractive inhibition ELISA. No or only limited cross-reactivity was observed against representatives having air-borne spores from Ascomycetes, Deuteromycetes as well as Basidiomycetes. phyt/G1470 mAb was incorporated in a subtractive inhibition SPR assay, consisting of a pre-incubation of mAb and sporangia, a centrifugation step to remove sporangia-bound phyt/G1470 mAb and quantification of remaining phyt/G1470 mAb by SPR. Good intra- and interday assay variability was observed and the assay had a detection limit of 2.2x10(6) sporangia/ml. Analysis time was 75 min, which is superior to existing P. infestans detection methods.


Assuntos
Anticorpos Monoclonais/imunologia , Técnicas Biossensoriais/métodos , Phytophthora/isolamento & purificação , Esporos Fúngicos/isolamento & purificação , Ressonância de Plasmônio de Superfície/métodos , Animais , Técnicas Biossensoriais/instrumentação , Ensaio de Imunoadsorção Enzimática/métodos , Camundongos , Microscopia de Fluorescência , Phytophthora/imunologia , Phytophthora/fisiologia , Doenças das Plantas/microbiologia , Esporos Fúngicos/imunologia , Ressonância de Plasmônio de Superfície/instrumentação , Fatores de Tempo
18.
Biosens Bioelectron ; 22(11): 2724-9, 2007 May 15.
Artigo em Inglês | MEDLINE | ID: mdl-17178456

RESUMO

This paper describes a biosensor-based method for detection of fungal spores using surface plasmon resonance (SPR). The approach involves the use of a mouse monoclonal antibody (Pst mAb8) and a SPR sensor for label-free detection of urediniospores from the model organism Puccinia striiformis f.sp. tritici (Pst). In the subtractive inhibition assay, urediniospores and Pst mAb8 were mixed, urediniospore-bound Pst mAb8 removed by centrifugation and the remaining Pst mAb8 quantified using the SPR sensor. Assay conditions were optimised and a detection limit of 3.1 x 10(5)urediniospores/ml was achieved. Spiked Pst samples were further examined in a background of a related spore and it was found that Pst detection was possible in this mixture. This study represent the first use of SPR technology for fungal spore detection as well as the first report of a successful biosensor-based detection strategy for Pst.


Assuntos
Basidiomycota/isolamento & purificação , Técnicas Biossensoriais/métodos , Contagem de Colônia Microbiana/métodos , Imunoensaio/métodos , Esporos Fúngicos/isolamento & purificação , Ressonância de Plasmônio de Superfície/métodos , Proteínas de Bactérias/imunologia , Basidiomycota/imunologia , Técnicas Biossensoriais/instrumentação , Contagem de Colônia Microbiana/instrumentação , Imunoensaio/instrumentação , Esporos Fúngicos/imunologia , Ressonância de Plasmônio de Superfície/instrumentação
19.
Biochemistry ; 45(5): 1525-35, 2006 Feb 07.
Artigo em Inglês | MEDLINE | ID: mdl-16445295

RESUMO

Thrombin-activable fibrinolysis inhibitor (TAFI) is distinct from pancreatic procarboxypeptidase B in several ways. The enzymatic activity of TAFIa is unstable and decays with a half-life of a few minutes. During this study, we observed that (i) the isoelectric point (pI) of TAFI shifts dramatically from pH 5 toward pH 8 upon activation and (ii) TAFIa is significantly less soluble than TAFI. The structural bases for these observations were investigated by characterizing all post-translational modifications, including attached glycans and disulfide connectivity. The analyses revealed that all five potential N-glycosylation sites were utilized including Asn22, Asn51, Asn63, Asn86 (located in the activation peptide), and Asn219 (located in the catalytic domain). Asn219 was also found in an unglycosylated variant. Four of the glycans, Asn51, Asn63, Asn86, and Asn219 displayed microheterogeneity, while the glycan attached to Asn22 appeared to be homogeneous. In addition, bisecting GlcNAc attached to the trimannose core was detected, suggesting an origin other than the liver. Monosaccharide composition and LC-MS/MS analyses did not produce evidence for O glycosylation. TAFI contains eight cysteine residues, of which two, Cys69 and Cys383, are not involved in disulfides and contain free sulfhydryl groups. The remaining six cystines form disulfides, including Cys156-Cys169, Cys228-Cys252, and Cys243-Cys257. This pattern is homologous to pancreatic procarboxypeptidase B, and it is therefore unlikely that permutations in the cysteine connectivity are responsible for the enzymatic instability. LC-MS/MS analyses covering more than 90% of the TAFI amino acid sequence revealed no additional modifications. When these results are taken together, they suggest that the inherent instability of TAFIa is not caused by post-translational modifications. However, after activation, TAFIa loses 80% of the attached glycans, generating a large shift in pI and a propensity to precipitate. These changes are likely to significantly affect the properties of TAFIa as compared to TAFI.


Assuntos
Carboxipeptidase B2/química , Processamento de Proteína Pós-Traducional , Carboxipeptidase B2/sangue , Carboxipeptidase B2/isolamento & purificação , Cromatografia Líquida , Dissulfetos/química , Glicosilação , Humanos , Ponto Isoelétrico , Espectrometria de Massas , Peptídeos/química , Peptídeos/isolamento & purificação , Polissacarídeos/química , Sensibilidade e Especificidade , Solubilidade
20.
Thromb Haemost ; 90(2): 206-17, 2003 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-12888867

RESUMO

The serpin plasminogen activator inhibitor-1 (PAI-1) is a potential target for anti-thrombotic and anti-cancer therapy. PAI-1 has 3 potential sites for N-linked glycosylation. We demonstrate here that PAI-1 expressed recombinantly or naturally by human cell lines display a heterogeneous glycosylation pattern of the sites at N209 and N265, while that at N329 is not utilised. The IC(50)-values for inactivation of PAI-1 by 4 monoclonal antibodies differed strongly between glycosylated PAI-1 and non-glycosylated PAI-1 expressed in E. coli. For 3 antibodies, an overlap of the epitopes with the glycosylation sites could be excluded as explanation for the differential reactivity. The latency transition of non-glycosylated, but not of glycosylated PAI-1, was strongly accelerated by a non-ionic detergent. The different biochemical properties of glycosylated and non-glycosylated PAI-1 depended specifically on glycosylation of either one or the other of the utilised sites. The PAI-1-binding protein vitronectin reversed the changes associated with the lack of glycosylation at one of the sites. Our results stress the importance of the source of PAI-1 when studying the mechanisms of action of PAI-1-inactivating compounds of potential clinical importance.


Assuntos
Glicosilação , Inibidor 1 de Ativador de Plasminogênio/metabolismo , Anticorpos Monoclonais/imunologia , Linhagem Celular , Detergentes/farmacologia , Variação Genética , Meia-Vida , Humanos , Estrutura Molecular , Octoxinol/farmacologia , Inibidor 1 de Ativador de Plasminogênio/química , Inibidor 1 de Ativador de Plasminogênio/imunologia , Vitronectina/farmacologia
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