Direct Probing of Vibrational Interactions in UiO-66 Polycrystalline Membranes with Femtosecond Two-Dimensional Infrared Spectroscopy.

UiO-66 is a benchmark metal-organic framework that holds great promise for the design of new functional materials. In this work, we perform two-dimensional infrared measurements on polycrystalline membranes of UiO-66 grown on c-sapphire substrates. We study the symmetric and antisymmetric stretch vibrations of the carboxylate groups of the terephthalate linker ions and find that these vibrations show a rapid energy exchange and a collective vibrational relaxation with a time constant of 1.3 ps. We also find that the symmetric vibration of the carboxylate group is strongly coupled to a vibration of the aromatic ring of the terephthalate ion. We observe that the antisymmetric carboxylate vibrations of different terephthalate linkers show rapid resonant (Förster) energy transfer with a time constant of ∼1 ps.

Nature of hydrated proton vibrations revealed by nonlinear spectroscopy of acid water nanodroplets.

We use polarization-resolved femtosecond pump-probe spectroscopy to investigate the vibrations of hydrated protons in anionic (AOT) and cationic (CTAB/hexanol) reverse micelles in the frequency range 2000-3500 cm-1. For small AOT micelles the dominant proton hydration structure consists of H3O+ with two OH groups donating hydrogen bonds to water molecules, and one OH group donating a weaker hydrogen bond to sulfonate. For cationic reverse micelles, we find that the absorption at frequencies >2500 cm-1 is dominated by asymmetric proton-hydration structures in which one of the OH groups of H3O+ is more weakly hydrogen-bonded to water than the other two OH groups.

Slow Proton Transfer in Nanoconfined Water.

The transport of protons in nanoconfined environments, such as in nanochannels of biological or artificial proton conductive membranes, is essential to chemistry, biology, and nanotechnology. In water, proton diffusion occurs by hopping of protons between water molecules. This process involves the rearrangement of many hydrogen bonds and as such can be strongly affected by nanoconfinement. We study the vibrational and structural dynamics of hydrated protons in water nanodroplets stabilized by a cationic surfactant using polarization-resolved femtosecond infrared transient absorption spectroscopy. We determine the time scale of proton hopping in the center of the water nanodroplets from the dynamics of the anisotropy of the transient absorption signals. We find that in small nanodroplets with a diameter <4 nm, proton hopping is more than 10 times slower than in bulk water. Even in relatively large nanodroplets with a diameter of ∼7 nm, we find that the rate of proton hopping is slowed by ∼4 times compared with bulk water.

Peptide Side-COOH Groups Have Two Distinct Conformations under Biorelevant Conditions.

The carboxyl (COOH) side chain groups of amino acids, such as aspartic acid, play an important role in biochemical processes, including enzymatic proton transport. In many theoretical studies, it was found that the (bio)chemical reactivity of the carboxyl group strongly depends on the conformation of this group. Interestingly, up to now there has been no experimental investigation of the geometry and the stability of different COOH conformers under biorelevant conditions. Here, we investigate the conformational isomerism of the side chain COOH group of N-acetyl aspartic acid amide using polarization-resolved two-dimensional infrared spectroscopy. We find that the carboxyl group shows two distinct near-planar conformers (syn and anti) when dissolved in water at room temperature. Both conformers are significantly populated in aqueous solution (75 ± 10% and 25 ± 10% for syn and anti, respectively). Molecular dynamics simulations show that the anti conformer interacts more strongly with water molecules than the syn conformer, explaining why this conformer is significantly present in aqueous solution.

Effect of intramolecular hydrogen-bond formation on the molecular conformation of amino acids.

The molecular conformation of the carboxyl group can be crucial for its chemical properties and intermolecular interactions, especially in complex molecular environments such as polypeptides. Here, we study the conformational behaviour of the model amino acid N-acetylproline in solution at room temperature with two-dimensional infrared spectroscopy. We find that the carboxyl group of N-acetylproline adopts two distinct conformations, syn- and anti-. In the syn-conformer the O-H group is oriented at  ~60∘ with respect to the C=O and in the anti-conformer the O-H is anti-parallel to the C=O. In hydrogen-bond accepting solvents such as dimethyl sulfoxide or water, we observe that, similar to simple carboxylic acids, around 20% of the -COOH groups adopt an anti-conformation. However, when N-acetylproline is dissolved in a weakly hydrogen-bond accepting solvent (acetonitrile), we observe the formation of a strong intramolecular hydrogen bond between the carboxyl group in the anti-conformation and the amide group, which stabilizes the anti-conformer, increasing its relative abundance to ~60%.

Vibrational Relaxation Dynamics of the Core and Outer Part of Proton-Hydration Clusters.

We study the ultrafast relaxation dynamics of hydrated proton clusters in acetonitrile using femtosecond mid-infrared pump-probe spectroscopy. We observe a strong dependence of transient absorption dynamics on the frequency of excitation. When we excite the OH vibrations with frequencies ≤3100 cm-1, we observe an ultrafast energy relaxation that leads to the heating of the local environment of the proton. This response is assigned to the OH vibrations of the water molecules in the core of the hydrated proton cluster. When we excite with frequencies ≥3200 cm-1, we observe a relatively slow vibrational relaxation with a T1 time constant ranging from 0.22 ± 0.04 ps at νex = 3200 cm-1 to 0.37 ± 0.02 ps at νex = 3520 cm-1. We assign this response to water molecules in the outer part of the hydrated proton cluster.

Observation of Distinct Carboxylic Acid Conformers in Aqueous Solution.

We investigate the molecular geometry of the carboxyl group of formic acid in acetonitrile and aqueous solutions at room temperature with two-dimensional infrared spectroscopy (2D-IR). We found that the carboxyl group adopts two distinct configurations: a configuration in which the carbonyl group is oriented antiparallel to the hydroxyl (anti-conformer), and a configuration in which the carbonyl group is oriented at an angle of ∼60° with respect to the hydroxyl (syn-conformer). These results constitute the first experimental evidence that carboxyl groups exist as two distinct and long-living conformational isomers in aqueous solution at room temperature.

Energy Relaxation and Structural Dynamics of Protons in Water/DMSO Mixtures.

We investigate the structure and dynamics of proton solvation structures in mixed water/dimethyl sulfoxide (DMSO) solvents using two-color mid-infrared femtosecond pump-probe spectroscopy. At a water fraction below 20%, protons are mainly solvated as (DMSO-H)+ and (DMSO-H)+-H2O structures. We find that excitation of the OH-stretch vibration of the proton in (DMSO-H)+-H2O structures leads to an ultrafast contraction of the hydrogen bond between (DMSO-H)+ and H2O. This excited state relaxes rapidly with T1 = 95 ± 10 fs and leads in part to a strong local heating effect and in part to predissociation of the protonated cluster into (DMSO-H)+ and water monomers.