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1.
Toxins (Basel) ; 16(5)2024 May 11.
Artigo em Inglês | MEDLINE | ID: mdl-38787076

RESUMO

Kunitz-type peptide expression has been described in the venom of snakes of the Viperidae, Elapidae and Colubridae families. This work aimed to identify these peptides in the venom gland transcriptome of the coral snake Micrurus mipartitus. Transcriptomic analysis revealed a high diversity of venom-associated Kunitz serine protease inhibitor proteins (KSPIs). A total of eight copies of KSPIs were predicted and grouped into four distinctive types, including short KSPI, long KSPI, Kunitz-Waprin (Ku-WAP) proteins, and a multi-domain Kunitz-type protein. From these, one short KSPI showed high identity with Micrurus tener and Austrelaps superbus. The long KSPI group exhibited similarity within the Micrurus genus and showed homology with various elapid snakes and even with the colubrid Pantherophis guttatus. A third group suggested the presence of Kunitz domains in addition to a whey-acidic-protein-type four-disulfide core domain. Finally, the fourth group corresponded to a transcript copy with a putative 511 amino acid protein, formerly annotated as KSPI, which UniProt classified as SPINT1. In conclusion, this study showed the diversity of Kunitz-type proteins expressed in the venom gland transcriptome of M. mipartitus.


Assuntos
Cobras Corais , Venenos Elapídicos , Perfilação da Expressão Gênica , Transcriptoma , Animais , Cobras Corais/genética , Venenos Elapídicos/genética , Venenos Elapídicos/química , Sequência de Aminoácidos , Simulação por Computador , Serpentes Peçonhentas
2.
J Fungi (Basel) ; 9(7)2023 Jun 29.
Artigo em Inglês | MEDLINE | ID: mdl-37504700

RESUMO

Beauveria bassiana is an entomopathogenic fungus used in agriculture as a biological controller worldwide. Despite being a well-studied organism, there are no genomic studies of B. bassiana isolates from Central American and Caribbean countries. This work characterized the functional potential of eight Neotropical isolates and provided an overview of their genomic characteristics, targeting genes associated with pathogenicity, the production of secondary metabolites, and the identification of CAZYmes as tools for future biotechnological applications. In addition, a comparison between these isolates and reference genomes was performed. Differences were observed according to geographical location and the lineages of the B. bassiana complex to which each isolate belonged.

3.
Mol Omics ; 18(8): 699-715, 2022 09 26.
Artigo em Inglês | MEDLINE | ID: mdl-35866667

RESUMO

The production of mannosylerythritol lipids (MELs) has been reported on different smut fungi. These biomolecules possess four typical conformations to which key commercially interesting properties have been attributed. In vivo, MEL production could only be explained by the chain-shortening pathway, a new route, unlike the main three fatty acid synthesis pathways described. The production of MELs requires nitrogen starvation and a carbon source, usually a fatty acid, the principals. The first MEL biosynthetic gene cluster was elucidated in U. maydis by the combination of different methodologies, which resulted in a reference genome, on which five genes comprising the MEL cluster were annotated. Subsequently, the evolution of DNA sequencing technologies advanced genome and transcriptome assembly, allowing the annotation of more MEL producers' genomes. These, in combination with different experimental techniques, coupled to bioinformatic methods offer a plethora of genomic resources for further manipulation and commercial exploitation. In this review, we present the main findings, which unraveled MEL production and multi-omics studies, leading to molecular tools for further genomic manipulation and exploitation in smut fungi.


Assuntos
Ustilaginales , Carbono/metabolismo , Ácidos Graxos/metabolismo , Família Multigênica , Nitrogênio/metabolismo , Ustilaginales/genética , Ustilaginales/metabolismo
4.
Microbiol Resour Announc ; 11(7): e0026722, 2022 Jul 21.
Artigo em Inglês | MEDLINE | ID: mdl-35658535

RESUMO

Beauveria bassiana, a well-known entomopathogenic fungus, has a worldwide distribution; however, genomes of isolates from the Neotropical region are scarce. Here, we report the draft genome sequences of eight B. bassiana isolates from Costa Rica, Puerto Rico, and Honduras.

5.
Microbiol Resour Announc ; 8(42)2019 Oct 17.
Artigo em Inglês | MEDLINE | ID: mdl-31624158

RESUMO

The basidiomycete Sporisorium graminicola (formally Pseudozyma graminicola) strain CBS10092 was originally isolated from an herbaceous plant in Russia. It is a known producer of mannosylerythritol lipids (MELs), the main component being MEL-C. Here, we present the 19.9-Mb draft genome sequence, which comprises 6,602 genes, including those encoding the MEL biosynthetic pathway.

6.
J Zoo Wildl Med ; 48(4): 1135-1145, 2017 12.
Artigo em Inglês | MEDLINE | ID: mdl-29297799

RESUMO

With stricter laws regulating the capture and possession of wild animals in Costa Rica, local wildlife-rescue centers have been overwhelmed by an influx of confiscated or relinquished illegal pets, specifically of psittacine species. As part of a nationwide health-assessment program targeting these centers, 122 birds representing five psittacine species ( Ara macao, Amazona autumnalis, Amazona auropalliata, Amazona farinosa, Aratinga finschi) and one hybrid macaw ( Ara macao × Ara ambiguus) were examined and tested between January 2011 and October 2012. Physical examination, hematology, and serum biochemical analyses were performed. Blood and feathers were tested for psittacine beak and feather disease virus (PBFDV) and avian polyomavirus (APV) via PCR. A DNA-based prevalence and sequence analysis characterized the strains of PBFDV and APV isolated. Physical abnormalities observed in 36% of the 122 birds examined were limited to thin body condition and poor feather quality. None of the feather abnormalities were characteristic of disease caused by either PBFDV or APV. Results of hematological and biochemical analyses were within normal limits except for five birds with leukocytosis and heterophilia, three birds with uric acid values above 16 mg/dl, and two additional birds with AST values above 400 IU/L. No hemoparasites were detected during blood smear examination. Overall prevalences of 9.8% (12/122) for PBFDV and 3.3% (4/122) for APV were documented, with only one bird testing positive for both PBFDV and APV. Birds from two of the eight centers were negative for both viruses. Findings from this study constitute the beginning of a standardized surveillance program for Costa Rican rescue centers, targeting the management of avian species enrolled in propagation and reintroduction programs and expanding of the spectrum of pathogen surveillance and husbandry recommendations in prerelease centers.


Assuntos
Bem-Estar do Animal , Doenças das Aves/diagnóstico , Psittaciformes , Animais , Animais Selvagens , Doenças das Aves/epidemiologia , Conservação dos Recursos Naturais , Costa Rica/epidemiologia
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