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1.
Phys Rev E ; 107(6-1): 064407, 2023 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-37464627

RESUMO

At the cellular level, all biological function relies on enzymes to provide catalytic acceleration of essential biochemical processes driving cellular metabolism. The enzyme is presumed to lower the activation energy barrier separating reactants from products, but the precise mechanism remains unresolved. Here we examine the temperature dependence of the enzyme-catalyzed dissociation of p-nitrophenyl-α-D-glucopyranoside (pNPG), a chromogenic analog for maltose, isomaltose, and sucrose disaccharide sugars, into p-nitrophenol (pNP) and glucose (monosaccharide). The enzymes of interest are the wild type and mutant forms of glucosidase MalL produced by the probiotic bacterium Bacillus subtilis. The per-enzyme production rates k(T) for the pNPG→ glucose reaction all show a characteristic temperature profile with an Arrhenius-like (approximately exponential) slow acceleration at low temperatures, rising through a point of inflexion to reach a maximum, then turning over to decline steeply towards zero production at high temperatures. This asymmetric profile is found to be well fitted by convolving an exponential growth function f(T) with a Gaussian temperature distribution g(T) to produce an exponentially modified Gaussian function h(T). To give a physical interpretation of the convolution components, we make the temperature mapping Θ≡T_{ref}-T where T_{ref} marks the temperature at which a given mutant becomes fully denatured (unfolded) and therefore inactive, then convert the convolution components to probability density functions which obey the convolution theorem of statistics. Working in Θ space, we identify f(Θ) as the density function for an Arrhenius-like transition from ground-state A to metastable-state B, and g(Θ) as the Gaussian distribution of offset-temperature fluctuations for the metastable state. By mapping the standard thermodynamic relations for temperature and energy fluctuations to the enzyme frame of reference, we are able to derive an expression for the lifetime for the metastable B state. For the 15 enzyme experiments, we obtain a mean value 〈Δt〉≳(29.0±1.3)×10^{-15}s, in remarkably good agreement with the ∼30-fs estimate for the period of glycosidic bond oscillations extracted from published infrared spectroscopy. We suggest that the metastable B state provides a low-energy target that has the effect of lowering the activation energy barrier by presenting an alternative axis for the reaction coordinate.


Assuntos
Glucose , Temperatura Alta , Temperatura , Termodinâmica , Catálise , Cinética
2.
J Biomol Struct Dyn ; 40(20): 10023-10032, 2022.
Artigo em Inglês | MEDLINE | ID: mdl-34229582

RESUMO

The novel coronavirus SARS-CoV-2, responsible for the present COVID-19 global pandemic, is known to bind to the angiotensin converting enzyme-2 (ACE2) receptor in human cells. A possible treatment of COVID-19 could involve blocking ACE2 and/or disabling the spike protein on the virus. Here, molecular dynamics simulations were performed to test the binding affinities of nine candidate compounds. Of these, three drugs showed significant therapeutic potential that warrant further investigation: SN35563, a ketamine ester analogue, was found to bind strongly to the ACE2 receptor but weakly within the spike receptor-binding domain (RBD); in contrast, arbidol and hydroxychloroquine bound preferentially with the spike RBD rather than ACE2. A fourth drug, remdesivir, bound approximately equally to both the ACE2 and viral spike RBD, thus potentially increasing risk of viral infection by bringing the spike protein into closer proximity to the ACE2 receptor. We suggest more experimental investigations to test that SN35563-in combination with arbidol or hydroxychloroquine-might act synergistically to block viral cell entry by providing therapeutic blockade of the host ACE2 simultaneous with reduction of viral spike receptor-binding; and that this combination therapy would allow the use of smaller doses of each drug.Communicated by Ramaswamy H. Sarma.


Assuntos
Enzima de Conversão de Angiotensina 2 , Antivirais , Receptores Virais , SARS-CoV-2 , Glicoproteína da Espícula de Coronavírus , Humanos , Enzima de Conversão de Angiotensina 2/antagonistas & inibidores , Enzima de Conversão de Angiotensina 2/química , Sítios de Ligação , COVID-19 , Hidroxicloroquina/farmacologia , Simulação de Dinâmica Molecular , Ligação Proteica , Receptores Virais/antagonistas & inibidores , Receptores Virais/química , SARS-CoV-2/efeitos dos fármacos , Glicoproteína da Espícula de Coronavírus/antagonistas & inibidores , Glicoproteína da Espícula de Coronavírus/química , Antivirais/farmacologia
3.
Neuroimage ; 227: 117633, 2021 02 15.
Artigo em Inglês | MEDLINE | ID: mdl-33316393

RESUMO

We present a detailed analysis of the Hindriks and van Putten thalamocortical mean-field model for propofol anesthesia [NeuroImage 60(23), 2012]. The Hindriks and van Putten (HvP) model predicts increases in delta and alpha power for moderate (up to 130%) prolongation of GABAA inhibitory response, corresponding to light anesthetic sedation. Our analysis reveals that, for deeper anesthetic effect, the model exhibits an unexpected abrupt jump in cortical activity from a low-firing state to an extremely high-firing stable state (∼250 spikes/s), and remains locked there even at GABAA prolongations as high as 300% which would be expected to induce full comatose suppression of all firing activity. We demonstrate that this unphysiological behavior can be completely suppressed with appropriate tuning of the parameters controlling the sigmoidal functions that map soma voltage to firing rate for the excitatory and inhibitory neural populations, coupled with elimination of the putative population-dependent anesthetic efficacies introduced in the HvP model. The modifications reported here constrain the anesthetized brain activity into a biologically plausible range in which the cortex now has access to a moderate-firing state ("awake") and a low-firing ("anesthetized") state such that the brain can transition from "awake" to "anesthetized" states at a critical level of drug concentration. The modified HvP model predicts a drug-effect hysteresis in which the drug concentration required for induction is larger than that at emergence. In addition, the revised model shows a decrease in the intensity and frequency of alpha-band fluctuations, transitioning to delta-band dominance, with deepening anesthesia. These predicted drug concentration-dependent changes in EEG dynamics are consistent with clinical reports.


Assuntos
Anestésicos Intravenosos/farmacologia , Córtex Cerebral/efeitos dos fármacos , Modelos Neurológicos , Rede Nervosa/efeitos dos fármacos , Inibição Neural/efeitos dos fármacos , Neurônios/efeitos dos fármacos , Propofol/farmacologia , Córtex Cerebral/fisiologia , Humanos , Rede Nervosa/fisiologia , Inibição Neural/fisiologia , Neurônios/fisiologia
4.
Phys Rev E ; 99(1-1): 012318, 2019 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-30780287

RESUMO

Spinodal decomposition is a well-known pattern-forming mechanism in metallurgic alloys, semiconductor crystals, and colloidal gels. In metallurgy, if a heated sample of a homogeneous Zn-Al alloy is suddenly quenched below a critical temperature, then the sample can spontaneously precipitate into inhomogenous textures of Zn- and Al-rich regions with significantly altered material properties such as ductility and hardness. Here we report on our recent discovery that a two-dimensional model of the human cortex with inhibitory diffusion can, under particular homogeneous initial conditions, exhibit a form of nonconserved spinodal decomposition in which regions of the cortex self-organize into hexagonally distributed binary patches of activity and inactivity. Fine-scale patterns precipitate rapidly, and then the dynamics slows to render coarser-scale shapes which can ripen into a range of slowly evolving patterns including mazelike labyrinths, hexagonal islands and continents, nucleating "mitotic cells" which grow to a critical size then subdivide, and inverse nucleations in which quiescent islands are surrounded by a sea of activity. One interesting class of activity coalesces into a soliton-like narrow ribbon of depolarization that traverses the cortex at ∼4cm/s. We speculate that this may correspond to the thus far unexplained interictal waves of cortical activation that precede grand-mal seizure in an epileptic event. We note that spinodal decomposition is quite distinct from the Turing mechanism for symmetry breaking in cortex investigated in earlier work by the authors [Steyn-Ross et al., Phys. Rev. E 76, 011916 (2007)PLEEE81539-375510.1103/PhysRevE.76.011916].

5.
Phys Rev E ; 97(6-1): 062403, 2018 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-30011536

RESUMO

The dynamics of a stochastic type-I Hodgkin-Huxley-like point neuron model exposed to inhibitory synaptic noise are investigated as a function of distance from spiking threshold and the inhibitory influence of the general anesthetic agent propofol. The model is biologically motivated and includes the effects of intrinsic ion-channel noise via a stochastic differential equation description as well as inhibitory synaptic noise modeled as multiple Poisson-distributed impulse trains with saturating response functions. The effect of propofol on these synapses is incorporated through this drug's principal influence on fast inhibitory neurotransmission mediated by γ-aminobutyric acid (GABA) type-A receptors via reduction of the synaptic response decay rate. As the neuron model approaches spiking threshold from below, we track membrane voltage fluctuation statistics of numerically simulated stochastic trajectories. We find that for a given distance from spiking threshold, increasing the magnitude of anesthetic-induced inhibition is associated with augmented signatures of critical slowing: fluctuation amplitudes and correlation times grow as spectral power is increasingly focused at 0 Hz. Furthermore, as a function of distance from threshold, anesthesia significantly modifies the power-law exponents for variance and correlation time divergences observable in stochastic trajectories. Compared to the inverse square root power-law scaling of these quantities anticipated for the saddle-node bifurcation of type-I neurons in the absence of anesthesia, increasing anesthetic-induced inhibition results in an observable exponent <-0.5 for variance and >-0.5 for correlation time divergences. However, these behaviors eventually break down as distance from threshold goes to zero with both the variance and correlation time converging to common values independent of anesthesia. Compared to the case of no synaptic input, linearization of an approximating multivariate Ornstein-Uhlenbeck model reveals these effects to be the consequence of an additional slow eigenvalue associated with synaptic activity that competes with those of the underlying point neuron in a manner that depends on distance from spiking threshold.

6.
Phys Rev E ; 93(2): 022402, 2016 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-26986357

RESUMO

Mean-field models of the brain approximate spiking dynamics by assuming that each neuron responds to its neighbors via a naive spatial average that neglects local fluctuations and correlations in firing activity. In this paper we address this issue by introducing a rigorous formalism to enable spatial coarse-graining of spiking dynamics, scaling from the microscopic level of a single type 1 (integrator) neuron to a macroscopic assembly of spiking neurons that are interconnected by chemical synapses and nearest-neighbor gap junctions. Spiking behavior at the single-neuron scale ℓ≈10µm is described by Wilson's two-variable conductance-based equations [H. R. Wilson, J. Theor. Biol. 200, 375 (1999)], driven by fields of incoming neural activity from neighboring neurons. We map these equations to a coarser spatial resolution of grid length Bℓ, with B≫1 being the blocking ratio linking micro and macro scales. Our method systematically eliminates high-frequency (short-wavelength) spatial modes q(->) in favor of low-frequency spatial modes Q(->) using an adiabatic elimination procedure that has been shown to be equivalent to the path-integral coarse graining applied to renormalization group theory of critical phenomena. This bottom-up neural regridding allows us to track the percolation of synaptic and ion-channel noise from the single neuron up to the scale of macroscopic population-average variables. Anticipated applications of neural regridding include extraction of the current-to-firing-rate transfer function, investigation of fluctuation criticality near phase-transition tipping points, determination of spatial scaling laws for avalanche events, and prediction of the spatial extent of self-organized macrocolumnar structures. As a first-order exemplar of the method, we recover nonlinear corrections for a coarse-grained Wilson spiking neuron embedded in a network of identical diffusively coupled neurons whose chemical synapses have been disabled. Intriguingly, we find that reblocking transforms the original type 1 Wilson integrator into a type 2 resonator whose spike-rate transfer function exhibits abrupt spiking onset with near-vertical takeoff and chaotic dynamics just above threshold.


Assuntos
Modelos Neurológicos , Neurônios/citologia , Membrana Celular/metabolismo , Difusão , Fenômenos Eletrofisiológicos , Junções Comunicantes/metabolismo
7.
Artigo em Inglês | MEDLINE | ID: mdl-25871145

RESUMO

The dynamics of a spiking neuron approaching threshold is investigated in the framework of Markov-chain models describing the random state-transitions of the underlying ion-channel proteins. We characterize subthreshold channel-noise-induced transmembrane potential fluctuations in both type-I (integrator) and type-II (resonator) parametrizations of the classic conductance-based Hodgkin-Huxley equations. As each neuron approaches spiking threshold from below, numerical simulations of stochastic trajectories demonstrate pronounced growth in amplitude simultaneous with decay in frequency of membrane voltage fluctuations induced by ion-channel state transitions. To explore this progression of fluctuation statistics, we approximate the exact Markov treatment with a 12-variable channel-based stochastic differential equation (SDE) and its Ornstein-Uhlenbeck (OU) linearization and show excellent agreement between Markov and SDE numerical simulations. Predictions of the OU theory with respect to membrane potential fluctuation variance, autocorrelation, correlation time, and spectral density are also in agreement and illustrate the close connection between the eigenvalue structure of the associated deterministic bifurcations and the observed behavior of the noisy Markov traces on close approach to threshold for both integrator and resonator point-neuron varieties.


Assuntos
Modelos Neurológicos , Neurônios/citologia , Neurônios/metabolismo , Canais Iônicos/metabolismo , Cadeias de Markov , Processos Estocásticos
8.
Front Syst Neurosci ; 8: 215, 2014.
Artigo em Inglês | MEDLINE | ID: mdl-25400558

RESUMO

The electroencephalogram (EEG) patterns recorded during general anesthetic-induced coma are closely similar to those seen during slow-wave sleep, the deepest stage of natural sleep; both states show patterns dominated by large amplitude slow waves. Slow oscillations are believed to be important for memory consolidation during natural sleep. Tracking the emergence of slow-wave oscillations during transition to unconsciousness may help us to identify drug-induced alterations of the underlying brain state, and provide insight into the mechanisms of general anesthesia. Although cellular-based mechanisms have been proposed, the origin of the slow oscillation has not yet been unambiguously established. A recent theoretical study by Steyn-Ross et al. (2013) proposes that the slow oscillation is a network, rather than cellular phenomenon. Modeling anesthesia as a moderate reduction in gap-junction interneuronal coupling, they predict an unconscious state signposted by emergent low-frequency oscillations with chaotic dynamics in space and time. They suggest that anesthetic slow-waves arise from a competitive interaction between symmetry-breaking instabilities in space (Turing) and time (Hopf), modulated by gap-junction coupling strength. A significant prediction of their model is that EEG phase coherence will decrease as the cortex transits from Turing-Hopf balance (wake) to Hopf-dominated chaotic slow-waves (unconsciousness). Here, we investigate changes in phase coherence during induction of general anesthesia. After examining 128-channel EEG traces recorded from five volunteers undergoing propofol anesthesia, we report a significant drop in sub-delta band (0.05-1.5 Hz) slow-wave coherence between frontal, occipital, and frontal-occipital electrode pairs, with the most pronounced wake-vs.-unconscious coherence changes occurring at the frontal cortex.

9.
Physiol Meas ; 35(2): 267-81, 2014 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-24434894

RESUMO

The electrical impedance of samples of mouse brain cortex has been measured between 4.7 kHz and 2.0 MHz. Brain slices of thickness 400 µm were prepared from two mice. Each slice was placed in either normal artificial cerebrospinal fluid or magnesium-free artificial cerebrospinal fluid; the latter induces seizure-like electrical behaviour. A total of 74 samples of cortex of approximate size 2 mm × 2 mm were then cut from these slices. Each sample in turn was placed between two flat Ag/AgCl electrodes and electrical impedance measured with an Agilent E4980A four-point impedance monitor. The measurements showed two regions of significant dispersion. Circuits based on the Cole-Cole and Fricke models, consisting of inductive, nonlinear capacitive and resistive elements were used to model the behaviour. Distributions of values for each circuit element have been determined for the samples prepared in seizing and non-seizing conditions. Few differences were found between the values of circuit elements between the seizing and non-seizing groups.


Assuntos
Córtex Cerebral/fisiologia , Modelos Biológicos , Animais , Córtex Cerebral/fisiopatologia , Impedância Elétrica , Feminino , Camundongos , Convulsões/fisiopatologia
10.
Phys Med Biol ; 58(11): 3599-613, 2013 Jun 07.
Artigo em Inglês | MEDLINE | ID: mdl-23640172

RESUMO

The electrical conductivity of small samples of mouse cortex (in vitro) has been measured at 10 kHz through the four-electrode method of van der Pauw. Brain slices from three mice were prepared under seizing and non-seizing conditions by changing the concentration of magnesium in the artificial cerebrospinal fluid used to maintain the tissue. These slices provided 121 square samples of cortical tissue; the conductivity of these samples was measured with an Agilent E4980A four-point impedance monitor. Of these, 73 samples were considered acceptable on the grounds of having good electrical contact between electrodes and tissue excluding outlier measurements. Results show that there is a significant difference (p = 0.03) in the conductivities of the samples under the two conditions. The seizing and non-seizing samples have mean conductivities of 0.33 and 0.36 S m(-1), respectively; however, these quantitative values should be used with caution as they are both subject to similar systematic uncertainties due to non-ideal temperature conditions and non-ideal placement of electrodes. We hypothesize that the difference between them, which is more robust to uncertainty, is due to the changing gap junction connectivity during seizures.


Assuntos
Encéfalo/patologia , Condutividade Elétrica , Convulsões/patologia , Animais , Feminino , Junções Comunicantes/metabolismo , Camundongos , Camundongos Endogâmicos C57BL
11.
PLoS Comput Biol ; 8(6): e1002560, 2012.
Artigo em Inglês | MEDLINE | ID: mdl-22737064

RESUMO

Relationships between spiking-neuron and rate-based approaches to the dynamics of neural assemblies are explored by analyzing a model system that can be treated by both methods, with the rate-based method further averaged over multiple neurons to give a neural-field approach. The system consists of a chain of neurons, each with simple spiking dynamics that has a known rate-based equivalent. The neurons are linked by propagating activity that is described in terms of a spatial interaction strength with temporal delays that reflect distances between neurons; feedback via a separate delay loop is also included because such loops also exist in real brains. These interactions are described using a spatiotemporal coupling function that can carry either spikes or rates to provide coupling between neurons. Numerical simulation of corresponding spike- and rate-based methods with these compatible couplings then allows direct comparison between the dynamics arising from these approaches. The rate-based dynamics can reproduce two different forms of oscillation that are present in the spike-based model: spiking rates of individual neurons and network-induced modulations of spiking rate that occur if network interactions are sufficiently strong. Depending on conditions either mode of oscillation can dominate the spike-based dynamics and in some situations, particularly when the ratio of the frequencies of these two modes is integer or half-integer, the two can both be present and interact with each other.


Assuntos
Potenciais de Ação/fisiologia , Modelos Neurológicos , Rede Nervosa/fisiologia , Animais , Biologia Computacional , Simulação por Computador , Humanos
12.
Bull Math Biol ; 73(2): 398-416, 2011 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-20821063

RESUMO

When the brain is in its noncognitive "idling" state, functional MRI measurements reveal the activation of default cortical networks whose activity is suppressed during cognitive processing. This default or background mode is characterized by ultra-slow BOLD oscillations (∼0.05 Hz), signaling extremely slow cycling in cortical metabolic demand across distinct cortical regions. Here we describe a model of the cortex which predicts that slow cycling of cortical activity can arise naturally as a result of nonlinear interactions between temporal (Hopf) and spatial (Turing) instabilities. The Hopf instability is triggered by delays in the inhibitory postsynaptic response, while the Turing instability is precipitated by increases in the strength of the gap-junction coupling between interneurons. We comment on possible implications for slow dendritic computation and information processing.


Assuntos
Potenciais de Ação/fisiologia , Córtex Cerebral/fisiologia , Modelos Neurológicos , Descanso/fisiologia , Algoritmos , Córtex Cerebral/citologia , Simulação por Computador , Dendritos/fisiologia , Sinapses Elétricas/fisiologia , Potenciais Pós-Sinápticos Excitadores/fisiologia , Humanos , Potenciais Pós-Sinápticos Inibidores/fisiologia , Interneurônios/fisiologia , Inibição Neural/fisiologia , Transmissão Sináptica/fisiologia
13.
Neuroimage ; 45(2): 298-311, 2009 Apr 01.
Artigo em Inglês | MEDLINE | ID: mdl-19121401

RESUMO

We argue that spatial patterns of cortical activation observed with EEG, MEG and fMRI might arise from spontaneous self-organisation of interacting populations of excitatory and inhibitory neurons. We examine the dynamical behavior of a mean-field cortical model that includes chemical and electrical (gap-junction) synapses, focusing on two limiting cases: the "slow-soma" limit with slow voltage feedback from soma to dendrite, and the "fast-soma" limit in which the feedback action of soma voltage onto dendrite reversal potentials is instantaneous. For slow soma-dendrite feedback, we find a low-frequency (approximately 1 Hz) dynamic Hopf instability, and a stationary Turing instability that catalyzes formation of patterned distributions of cortical firing-rate activity with pattern wavelength approximately 2 cm. Turing instability can only be triggered when gap-junction diffusion between inhibitory neurons is strong, but patterning is destroyed if the tonic level of subcortical excitation is raised sufficiently. Interaction between the Hopf and Turing instabilities may describe the non-cognitive background or "default" state of the brain, as observed by BOLD imaging. In the fast-soma limit, the model predicts a high-frequency Hopf (approximately 35 Hz) instability, and a traveling-wave gamma-band instability that manifests as a 2-D standing-wave pattern oscillating in place at approximately 30 Hz. Small levels of inhibitory diffusion enhance and broaden the definition of the gamma antinodal regions by suppressing higher-frequency spatial modes, but gamma emergence is not contingent on the presence of inhibitory gap junctions; higher levels of diffusion suppress gamma activity. Fast-soma instabilities are enhanced by increased subcortical stimulation. Prompt soma-dendrite feedback may be an essential component of the genesis and large-scale cortical synchrony of gamma activity observed at the point of cognition.


Assuntos
Potenciais de Ação/fisiologia , Relógios Biológicos/fisiologia , Córtex Cerebral/fisiologia , Cognição/fisiologia , Modelos Neurológicos , Rede Nervosa/fisiologia , Neurônios/fisiologia , Simulação por Computador , Humanos , Transmissão Sináptica/fisiologia
14.
Phys Rev E Stat Nonlin Soft Matter Phys ; 77(6 Pt 1): 061908, 2008 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-18643301

RESUMO

We present evidence for the hypothesis that transitions between the low- and high-firing states of the cortical slow oscillation correspond to neuronal phase transitions. By analyzing intracellular recordings of the membrane potential during the cortical slow oscillation in rats, we quantify the temporal fluctuations in power and the frequency centroid of the power spectrum in the period of time before "down" to "up" transitions. By taking appropriate averages over such events, we present these statistics as a function of time before transition. The results demonstrate an increase in fluctuation power and time scale broadly consistent with the slowing of systems close to phase transitions. The analysis is complicated and limited by the difficulty in identifying when transitions begin, and removing dc trends in membrane potential.


Assuntos
Biofísica/métodos , Oscilometria/métodos , Animais , Encéfalo/patologia , Córtex Cerebral/patologia , Simulação por Computador , Eletrodos , Masculino , Potenciais da Membrana , Modelos Neurológicos , Modelos Estatísticos , Neurônios/metabolismo , Ratos , Ratos Wistar , Fatores de Tempo
15.
Phys Rev E Stat Nonlin Soft Matter Phys ; 78(6 Pt 1): 061908, 2008 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-19256869

RESUMO

We use Hamilton's equations of classical mechanics to investigate the behavior of a cortical neuron on the approach to an action potential. We use a two-component dynamic model of a single neuron, due to Wilson, with added noise inputs. We derive a Lagrangian for the system, from which we construct Hamilton's equations. The conjugate momenta are found to be linear combinations of the noise input to the system. We use this approach to consider theoretically and computationally the most likely manner in which such a modeled neuron approaches a firing event. We find that the firing of a neuron is a result of a drop in inhibition, due to a temporary increase in negative bias of the mean noise input to the inhibitory control equation. Moreover, we demonstrate through theory and simulation that, on average, the bias in the noise increases in an exponential manner on the approach to an action potential. In the Hamiltonian description, an action potential can therefore be considered a result of the exponential growth of the conjugate momenta variables pulling the system away from its equilibrium state, into a nonlinear regime.


Assuntos
Modelos Neurológicos , Neurônios/fisiologia , Potenciais de Ação/fisiologia , Animais , Fenômenos Biofísicos , Modelos Lineares , Potenciais da Membrana/fisiologia , Dinâmica não Linear , Processos Estocásticos
16.
Phys Rev E Stat Nonlin Soft Matter Phys ; 76(1 Pt 1): 011916, 2007 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-17677503

RESUMO

One of the grand puzzles in neuroscience is establishing the link between cognition and the disparate patterns of spontaneous and task-induced brain activity that can be measured clinically using a wide range of detection modalities such as scalp electrodes and imaging tomography. High-level brain function is not a single-neuron property, yet emerges as a cooperative phenomenon of multiply-interacting populations of neurons. Therefore a fruitful modeling approach is to picture the cerebral cortex as a continuum characterized by parameters that have been averaged over a small volume of cortical tissue. Such mean-field cortical models have been used to investigate gross patterns of brain behavior such as anesthesia, the cycles of natural sleep, memory and erasure in slow-wave sleep, and epilepsy. There is persuasive and accumulating evidence that direct gap-junction connections between inhibitory neurons promote synchronous oscillatory behavior both locally and across distances of some centimeters, but, to date, continuum models have ignored gap-junction connectivity. In this paper we employ simple mean-field arguments to derive an expression for D2, the diffusive coupling strength arising from gap-junction connections between inhibitory neurons. Using recent neurophysiological measurements reported by Fukuda [J. Neurosci. 26, 3434 (2006)], we estimate an upper limit of D2 approximately 0.6cm2. We apply a linear stability analysis to a standard mean-field cortical model, augmented with gap-junction diffusion, and find this value for the diffusive coupling strength to be close to the critical value required to destabilize the homogeneous steady state. Computer simulations demonstrate that larger values of D2 cause the noise-driven model cortex to spontaneously crystalize into random mazelike Turing structures: centimeter-scale spatial patterns in which regions of high-firing activity are intermixed with regions of low-firing activity. These structures are consistent with the spatial variations in brain activity patterns detected with the BOLD (blood oxygen-level-dependent) signal detected with magnetic resonance imaging, and may provide a natural substrate for synchronous gamma-band rhythms observed across separated EEG (electroencephalogram) electrodes.


Assuntos
Relógios Biológicos/fisiologia , Córtex Cerebral/fisiologia , Cognição/fisiologia , Eletroencefalografia/métodos , Junções Comunicantes/fisiologia , Modelos Neurológicos , Rede Nervosa/fisiologia , Animais , Simulação por Computador , Humanos
17.
J Biol Phys ; 33(3): 213-46, 2007 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-19669541

RESUMO

Mean-field models of the cortex have been used successfully to interpret the origin of features on the electroencephalogram under situations such as sleep, anesthesia, and seizures. In a mean-field scheme, dynamic changes in synaptic weights can be considered through fluctuation-based Hebbian learning rules. However, because such implementations deal with population-averaged properties, they are not well suited to memory and learning applications where individual synaptic weights can be important. We demonstrate that, through an extended system of equations, the mean-field models can be developed further to look at higher-order statistics, in particular, the distribution of synaptic weights within a cortical column. This allows us to make some general conclusions on memory through a mean-field scheme. Specifically, we expect large changes in the standard deviation of the distribution of synaptic weights when fluctuation in the mean soma potentials are large, such as during the transitions between the "up" and "down" states of slow-wave sleep. Moreover, a cortex that has low structure in its neuronal connections is most likely to decrease its standard deviation in the weights of excitatory to excitatory synapses, relative to the square of the mean, whereas a cortex with strongly patterned connections is most likely to increase this measure. This suggests that fluctuations are used to condense the coding of strong (presumably useful) memories into fewer, but dynamic, neuron connections, while at the same time removing weaker (less useful) memories.

18.
J Comput Neurosci ; 21(3): 243-57, 2006 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-16927212

RESUMO

We use a mean-field macrocolumn model of the cerebral cortex to offer an interpretation of the K-complex of the electroencephalogram to complement those of more detailed neuron-by-neuron models. We interpret the K-complex as a momentary excursion of the cortex from a stable low-firing state to an unstable high-firing state, and hypothesize that the related slow oscillation can be considered as the periodic oscillation between two meta-stable solutions of the mean-field model. By incorporating a Hebbian-style learning rule that links the growth in synapse strength to fluctuations in soma potential, we demonstrate a self-organization behaviour that draws the modelled cortex close to the edge of stability of the low-firing state. Furthermore, a very slow oscillation can occur in the excitability of the cortex that has similarities with the infra-slow oscillation of sleep.


Assuntos
Córtex Cerebral/citologia , Córtex Cerebral/fisiologia , Modelos Biológicos , Neurônios/fisiologia , Animais , Eletroencefalografia/métodos , Neurônios/citologia , Sono/fisiologia , Sinapses/fisiologia
19.
Phys Rev E Stat Nonlin Soft Matter Phys ; 74(5 Pt 1): 051920, 2006 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-17279952

RESUMO

We present mathematical and simulation analyses of the below-threshold noisy response of two biophysically motivated models for excitable membrane due to H. R. Wilson: a squid axon ("resonator") and a human cortical neuron ("integrator"). When stimulated with a low-intensity white noise superimposed on a dc control current, both membrane types generate voltage fluctuations that exhibit critical slowing down--that is, the voltage responsiveness to noisy input currents grows in amplitude while slowing in frequency--as the membrane approaches spiking threshold from below. We define threshold unambiguously as that dc current that renders a zero real eigenvalue for the Jacobian matrix for the integrator neuron, and, for the resonator neuron, as the dc current that gives a complex eigenvalue pair whose real part is zero. Using a linear Ornstein-Uhlenbeck analysis, we give exact small-noise expressions for the variance, power spectrum, and correlation function of the voltage fluctuations, and we derive the scaling laws for the divergence of susceptibility and correlation times for approach to threshold. We compare these predictions with numerical simulations of the nonlinear stochastic equations, and demonstrate that, provided the white-noise perturbations are kept sufficiently small, the linearized theory works well. These predictions should be testable in the laboratory using a current-clamped cell configuration. If confirmed, then the proximity of a neuron to its spike-transition point can be judged by measuring its subthreshold susceptibility to white-noise stimulation. We postulate that such temporally correlated fluctuations could provide a means of subthreshold signaling via gap-junction connections with neighboring neurons.


Assuntos
Potenciais de Ação/fisiologia , Membrana Celular/fisiologia , Limiar Diferencial/fisiologia , Junções Comunicantes/fisiologia , Modelos Neurológicos , Neurônios/fisiologia , Transmissão Sináptica/fisiologia , Animais , Simulação por Computador , Decapodiformes , Humanos , Armazenamento e Recuperação da Informação/métodos , Modelos Estatísticos , Especificidade da Espécie , Processos Estocásticos
20.
Phys Rev E Stat Nonlin Soft Matter Phys ; 72(5 Pt 1): 051910, 2005 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-16383648

RESUMO

In this paper we use a continuum model in two spatial dimensions to study the dynamics of the cortex during natural sleep, including explicitly the effects of two key neuromodulators. The model predicts that a number of states could be available to the cortex. We identify two of these with slow-wave sleep and rapid eye movement (REM) sleep, and focus on the transition between the two. Eigenvalue analysis of the linearized model, together with simulations on a two-dimensional grid, show that a number of oscillatory states exist; the occurrence of these is particularly dependent upon the duration in time of the inhibitory postsynaptic potential. These oscillatory states are similar to the cortical slow oscillation and certain types of seizure. Power spectra are evaluated for different parameter sets and compare favorably with experiment. Grid simulations show that transitions between cortical states (e.g., slow-wave to REM) can be seeded at any point in space by random fluctuations in subcortical input.


Assuntos
Relógios Biológicos/fisiologia , Córtex Cerebral/fisiologia , Depressão Alastrante da Atividade Elétrica Cortical/fisiologia , Modelos Neurológicos , Rede Nervosa/fisiologia , Convulsões/fisiopatologia , Sono/fisiologia , Simulação por Computador , Eletroencefalografia/métodos , Neurônios/fisiologia , Transmissão Sináptica/fisiologia
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