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Protein Sci ; 30(9): 1804-1817, 2021 09.
Artigo em Inglês | MEDLINE | ID: mdl-34076319

RESUMO

With over 150 heritable mutations identified as disease-causative, superoxide dismutase 1 (SOD1) has been a main target of amyotrophic lateral sclerosis (ALS) research and therapeutic efforts. However, recent evidence has suggested that neither loss of function nor protein aggregation is responsible for promoting neurotoxicity. Furthermore, there is no clear pattern to the nature or the location of these mutations that could suggest a molecular mechanism behind SOD1-linked ALS. Here, we utilize reliable and accurate computational techniques to predict the perturbations of 10 such mutations to the free energy changes of SOD1 as it matures from apo monomer to metallated dimer. We find that the free energy perturbations caused by these mutations strongly depend on maturational progress, indicating the need for state-specific therapeutic targeting. We also find that many mutations exhibit similar patterns of perturbation to native and non-native maturation, indicating strong thermodynamic coupling between the dynamics at various sites of maturation within SOD1. These results suggest the presence of an allosteric network in SOD1 which is vulnerable to disruption by these mutations. Analysis of these perturbations may contribute to uncovering a unifying molecular mechanism which explains SOD1-linked ALS and help to guide future therapeutic efforts.


Assuntos
Apoproteínas/química , Superóxido Dismutase-1/química , Zinco/química , Regulação Alostérica , Esclerose Lateral Amiotrófica/genética , Esclerose Lateral Amiotrófica/metabolismo , Esclerose Lateral Amiotrófica/patologia , Apoproteínas/genética , Apoproteínas/metabolismo , Sítios de Ligação , Cátions Bivalentes , Expressão Gênica , Humanos , Ligação de Hidrogênio , Cinética , Simulação de Dinâmica Molecular , Mutação , Agregados Proteicos , Ligação Proteica , Conformação Proteica em alfa-Hélice , Conformação Proteica em Folha beta , Domínios e Motivos de Interação entre Proteínas , Multimerização Proteica , Superóxido Dismutase-1/genética , Superóxido Dismutase-1/metabolismo , Termodinâmica , Zinco/metabolismo
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