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1.
Nature ; 627(8004): 505-509, 2024 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-38418881

RESUMO

The Double Asteroid Redirection Test (DART) had an impact with Dimorphos (a satellite of the asteroid Didymos) on 26 September 20221. Ground-based observations showed that the Didymos system brightened by a factor of 8.3 after the impact because of ejecta, returning to the pre-impact brightness 23.7 days afterwards2. Hubble Space Telescope observations made from 15 minutes after impact to 18.5 days after, with a spatial resolution of 2.1 kilometres per pixel, showed a complex evolution of the ejecta3, consistent with other asteroid impact events. The momentum enhancement factor, determined using the measured binary period change4, ranges between 2.2 and 4.9, depending on the assumptions about the mass and density of Dimorphos5. Here we report observations from the LUKE and LEIA instruments on the LICIACube cube satellite, which was deployed 15 days in advance of the impact of DART. Data were taken from 71 seconds before the impact until 320 seconds afterwards. The ejecta plume was a cone with an aperture angle of 140 ± 4 degrees. The inner region of the plume was blue, becoming redder with increasing distance from Dimorphos. The ejecta plume exhibited a complex and inhomogeneous structure, characterized by filaments, dust grains and single or clustered boulders. The ejecta velocities ranged from a few tens of metres per second to about 500 metres per second.

2.
Science ; 364(6445)2019 06 14.
Artigo em Inglês | MEDLINE | ID: mdl-30655447

RESUMO

The interior structure of Saturn, the depth of its winds, and the mass and age of its rings constrain its formation and evolution. In the final phase of the Cassini mission, the spacecraft dived between the planet and its innermost ring, at altitudes of 2600 to 3900 kilometers above the cloud tops. During six of these crossings, a radio link with Earth was monitored to determine the gravitational field of the planet and the mass of its rings. We find that Saturn's gravity deviates from theoretical expectations and requires differential rotation of the atmosphere extending to a depth of at least 9000 kilometers. The total mass of the rings is (1.54 ± 0.49) × 1019 kilograms (0.41 ± 0.13 times that of the moon Mimas), indicating that the rings may have formed 107 to 108 years ago.

3.
Nature ; 555(7695): 220-222, 2018 03 07.
Artigo em Inglês | MEDLINE | ID: mdl-29517001

RESUMO

The gravity harmonics of a fluid, rotating planet can be decomposed into static components arising from solid-body rotation and dynamic components arising from flows. In the absence of internal dynamics, the gravity field is axially and hemispherically symmetric and is dominated by even zonal gravity harmonics J2n that are approximately proportional to qn, where q is the ratio between centrifugal acceleration and gravity at the planet's equator. Any asymmetry in the gravity field is attributed to differential rotation and deep atmospheric flows. The odd harmonics, J3, J5, J7, J9 and higher, are a measure of the depth of the winds in the different zones of the atmosphere. Here we report measurements of Jupiter's gravity harmonics (both even and odd) through precise Doppler tracking of the Juno spacecraft in its polar orbit around Jupiter. We find a north-south asymmetry, which is a signature of atmospheric and interior flows. Analysis of the harmonics, described in two accompanying papers, provides the vertical profile of the winds and precise constraints for the depth of Jupiter's dynamical atmosphere.

4.
Science ; 344(6179): 78-80, 2014 Apr 04.
Artigo em Inglês | MEDLINE | ID: mdl-24700854

RESUMO

The small and active Saturnian moon Enceladus is one of the primary targets of the Cassini mission. We determined the quadrupole gravity field of Enceladus and its hemispherical asymmetry using Doppler data from three spacecraft flybys. Our results indicate the presence of a negative mass anomaly in the south-polar region, largely compensated by a positive subsurface anomaly compatible with the presence of a regional subsurface sea at depths of 30 to 40 kilometers and extending up to south latitudes of about 50°. The estimated values for the largest quadrupole harmonic coefficients (10(6)J2 = 5435.2 ± 34.9, 10(6)C22 = 1549.8 ± 15.6, 1σ) and their ratio (J2/C22 = 3.51 ± 0.05) indicate that the body deviates mildly from hydrostatic equilibrium. The moment of inertia is around 0.335MR(2), where M is the mass and R is the radius, suggesting a differentiated body with a low-density core.


Assuntos
Gravitação , Saturno , Água , Meio Ambiente Extraterreno , Gelo , Astronave
5.
Vox Sang ; 106(3): 227-33, 2014 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-24134566

RESUMO

BACKGROUND: In the countries with high G6PD deficiency prevalence, blood donors are not routinely screened for this genetic defect. G6PD deficiency is often asymptomatic, blood donors may be carriers of the deficiency without being aware of it. The aim of the study was to evaluate the prevalence of G6PD deficiency among the Italian blood donors. DESIGN AND METHODS: From October 2009 to April 2011, 3004 blood donors from a large hospital transfusion centre were screened for G6PD deficiency using differential pH-metry and the characterization of G6PD mutations was performed on G6PD-deficient subjects. The haematological features of G6PD-deficient and normal donors were also compared. RESULTS: Thirty-three subjects (25 men and 8 women) with low G6PD activity were identified, corresponding to 1·1% of the examined blood donor population. The frequencies of class II severe alleles (Mediterranean, Valladolid, Chatham and Cassano) and class III mild alleles (Seattle, A- and Neapolis) were 48% and 43%, respectively. The haematological parameters of G6PD- donors were within normal range; however, the comparison between normal and G6PD- class II donors showed significant differences. CONCLUSION: In Italy, the presence of blood donors with G6PD deficiency is not a rare event and the class II severe variants are frequent. The identification of G6PD-deficient donors and the characterization of the molecular variants would prevent the use of G6PD-deficient RBC units when the haemolytic complications could be relevant especially for high risk patients as premature infants and neonates and patients with sickle cell disease submitted to multiple transfusions.


Assuntos
Doadores de Sangue , Deficiência de Glucosefosfato Desidrogenase/epidemiologia , Deficiência de Glucosefosfato Desidrogenase/genética , Glucosefosfato Desidrogenase/sangue , Mutação , Reação Transfusional , Adulto , Anemia Falciforme/enzimologia , Anemia Falciforme/epidemiologia , Anemia Falciforme/genética , Feminino , Glucosefosfato Desidrogenase/genética , Deficiência de Glucosefosfato Desidrogenase/enzimologia , Humanos , Lactente , Recém-Nascido , Recém-Nascido Prematuro , Itália/epidemiologia , Masculino , Programas de Rastreamento , Prevalência , Fatores de Risco , Índice de Gravidade de Doença
6.
Nature ; 448(7149): 50-3, 2007 Jul 05.
Artigo em Inglês | MEDLINE | ID: mdl-17611535

RESUMO

Hyperion is Saturn's largest known irregularly shaped satellite and the only moon observed to undergo chaotic rotation. Previous work has identified Hyperion's surface as distinct from other small icy objects but left the causes unsettled. Here we report high-resolution images that reveal a unique sponge-like appearance at scales of a few kilometres. Mapping shows a high surface density of relatively well-preserved craters two to ten kilometres across. We have also determined Hyperion's size and mass, and calculated the mean density as 544 +/- 50 kg m(-3), which indicates a porosity of >40 per cent. The high porosity may enhance preservation of craters by minimizing the amount of ejecta produced or retained, and accordingly may be the crucial factor in crafting this unusual surface.

7.
Ultramicroscopy ; 107(2-3): 158-65, 2007.
Artigo em Inglês | MEDLINE | ID: mdl-16942840

RESUMO

We report computational and experimental investigations on injection and transmission of light in microfabricated fully Aluminum-coated quartz probes. In particular, we show that a selective coupling of either the HE(11) or the TM(01) mode can be carried out by injecting focused linearly or radially polarized beams into the probe. Optical fields, emitted by the probe after a controlled injection, are characterized in intensity and phase with the help of an interferometric technique. With the help of near-field measurement, we finally demonstrate that a longitudinally polarized spot localized at the tip apex is actually produced when the TM(01) mode is coupled into the probe.

8.
Opt Lett ; 30(21): 2885-7, 2005 Nov 01.
Artigo em Inglês | MEDLINE | ID: mdl-16279458

RESUMO

We apply heterodyne scanning near-field optical microscopy (SNOM) to observe with subwavelength resolution the amplitude and phase of optical fields propagating in several microfabricated waveguide devices operating around the 1.55 microm wavelength. Good agreement between the SNOM measurements and predicted optical mode propagation characteristics in standard ridge waveguides demonstrates the validity of the method. In situ observation of the subwavelength-scale distribution and propagation of optical fields in straight and 90 degrees bend photonic crystal waveguides facilitates a more detailed understanding of the optical performance characteristics of these devices and illustrates the usefulness of the technique for investigating nanostructured photonic devices.


Assuntos
Cristalização/métodos , Aumento da Imagem/métodos , Microscopia Confocal/instrumentação , Microscopia Confocal/métodos , Desenho de Equipamento , Análise de Falha de Equipamento , Fótons
9.
Braz J Med Biol Res ; 38(8): 1175-83, 2005 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-16082457

RESUMO

The pressure behavior of proteins may be summarized as a the pressure-induced disordering of their structures. This thermodynamic parameter has effects on proteins that are similar but not identical to those induced by temperature, the other thermodynamic parameter. Of particular importance are the intermolecular interactions that follow partial protein unfolding and that give rise to the formation of fibrils. Because some proteins do not form fibrils under pressure, these observations can be related to the shape of the stability diagram. Weak interactions which are differently affected by hydrostatic pressure or temperature play a determinant role in protein stability. Pressure acts on the 2 degrees, 3 degrees and 4 degrees structures of proteins which are maintained by electrostatic and hydrophobic interactions and by hydrogen bonds. We present some typical examples of how pressure affects the tertiary structure of proteins (the case of prion proteins), induces unfolding (ataxin), is a convenient tool to study enzyme dissociation (enolase), and provides arguments to understand the role of the partial volume of an enzyme (butyrylcholinesterase). This approach may have important implications for the understanding of the basic mechanism of protein diseases and for the development of preventive and therapeutic measures.


Assuntos
Pressão Hidrostática , Estrutura Terciária de Proteína , Ataxina-3 , Butirilcolinesterase/química , Humanos , Proteínas do Tecido Nervoso/química , Proteínas Nucleares , Fosfopiruvato Hidratase/química , Príons/química , Proteínas Repressoras , Termodinâmica
10.
Braz. j. med. biol. res ; 38(8): 1175-1183, Aug. 2005.
Artigo em Inglês | LILACS | ID: lil-405518

RESUMO

The pressure behavior of proteins may be summarized as a the pressure-induced disordering of their structures. This thermodynamic parameter has effects on proteins that are similar but not identical to those induced by temperature, the other thermodynamic parameter. Of particular importance are the intermolecular interactions that follow partial protein unfolding and that give rise to the formation of fibrils. Because some proteins do not form fibrils under pressure, these observations can be related to the shape of the stability diagram. Weak interactions which are differently affected by hydrostatic pressure or temperature play a determinant role in protein stability. Pressure acts on the 2°, 3° and 4° structures of proteins which are maintained by electrostatic and hydrophobic interactions and by hydrogen bonds. We present some typical examples of how pressure affects the tertiary structure of proteins (the case of prion proteins), induces unfolding (ataxin), is a convenient tool to study enzyme dissociation (enolase), and provides arguments to understand the role of the partial volume of an enzyme (butyrylcholinesterase). This approach may have important implications for the understanding of the basic mechanism of protein diseases and for the development of preventive and therapeutic measures.


Assuntos
Humanos , Pressão Hidrostática , Estrutura Terciária de Proteína , Butirilcolinesterase/química , Proteínas Nucleares , Proteínas do Tecido Nervoso/química , Fosfopiruvato Hidratase/química , Príons/química , Proteínas Repressoras , Termodinâmica
11.
Cell Mol Biol (Noisy-le-grand) ; 50(4): 377-85, 2004 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-15529748

RESUMO

Protein folding is essential for the flow of genetic information to biological activity. A failure in this process can result in disease, by causing cell damage and sometimes death. The misfolding of proteins often induces their aggregation, initiating the fibril formation seen in a range of human and animal diseases. Because misfolding and aggregation are of fundamental importance in vivo, there is currently great interest in understanding their mechanisms. To gain insight into the folding and unfolding processes of proteins, for nearly a century, an original biophysical approach has been successfully used: the application of high hydrostatic pressure combined with various spectroscopic and kinetic techniques. Because high pressure provides new insight into protein structure and folding which cannot be obtained by other techniques, the conformations of pressure-induced unfolding intermediates and species involved in the initial states of aggregation of proteins associated with specific diseases are currently being investigated. Our contention is that by exploring folding kinetics, misfolding pathways and stability under pressure, it will be possible to understand the mechanisms of amyloidogenesis, with the ultimate goal to design therapeutic strategies to prevent progression of the disease.


Assuntos
Pressão , Desnaturação Proteica , Proteínas/química , Amiloide/química , Amiloide/fisiologia , Animais , Ataxina-3 , Doença/etiologia , Humanos , Métodos , Proteínas do Tecido Nervoso/química , Proteínas do Tecido Nervoso/fisiologia , Proteínas Nucleares , Príons/química , Príons/fisiologia , Dobramento de Proteína , Proteínas/fisiologia , Proteínas Repressoras
12.
Nature ; 425(6956): 374-6, 2003 Sep 25.
Artigo em Inglês | MEDLINE | ID: mdl-14508481

RESUMO

According to general relativity, photons are deflected and delayed by the curvature of space-time produced by any mass. The bending and delay are proportional to gamma + 1, where the parameter gamma is unity in general relativity but zero in the newtonian model of gravity. The quantity gamma - 1 measures the degree to which gravity is not a purely geometric effect and is affected by other fields; such fields may have strongly influenced the early Universe, but would have now weakened so as to produce tiny--but still detectable--effects. Several experiments have confirmed to an accuracy of approximately 0.1% the predictions for the deflection and delay of photons produced by the Sun. Here we report a measurement of the frequency shift of radio photons to and from the Cassini spacecraft as they passed near the Sun. Our result, gamma = 1 + (2.1 +/- 2.3) x 10(-5), agrees with the predictions of standard general relativity with a sensitivity that approaches the level at which, theoretically, deviations are expected in some cosmological models.

13.
Hum Gene Ther ; 12(16): 2007-16, 2001 Nov 01.
Artigo em Inglês | MEDLINE | ID: mdl-11686941

RESUMO

Gene therapy may provide a long-term approach to the treatment of mucopolysaccharidoses. As a first step toward the development of an effective gene therapy for mucopolysaccharidosis type IVA (Morquio syndrome), a recombinant retroviral vector, LGSN, derived from the LXSN vector, containing a full-length human wildtype N-acetylgalactosamine-6-sulfate sulfatase (GALNS) cDNA, was produced. Severe Morquio and normal donor fibroblasts were transduced by LGSN. GALNS activity in both Morquio and normal transduced cells was several fold higher than normal values. To measure the variability of GALNS expression among different transduced cells, we transduced normal and Morquio lymphoblastoid B cells and PBLs, human keratinocytes, murine myoblasts C2C12, and rabbit synoviocytes HIG-82 with LGSN. In all cases, an increase of GALNS activity after transduction was measured. In Morquio cells co-cultivated with enzyme-deficient transduced cells, we demonstrated enzyme uptake and persistence of GALNS activity above normal levels for up to 6 days. The uptake was mannose-6-phosphate dependent. Furthermore, we achieved clear evidence that LGSN transduction of Morquio fibroblasts led to correction of the metabolic defect. These results provide the first evidence that GALNS may be delivered either locally or systematically by various cells in an ex vivo gene therapy of MPS IVA.


Assuntos
Condroitina Sulfatases/genética , Terapia Genética , Mucopolissacaridose IV/terapia , Retroviridae/genética , Transdução Genética , Animais , Técnicas de Cocultura , Humanos , Mucopolissacaridose IV/patologia , Coelhos
14.
FEBS Lett ; 497(2-3): 131-6, 2001 May 25.
Artigo em Inglês | MEDLINE | ID: mdl-11377427

RESUMO

Sso7d is a small, basic, abundant protein from the thermoacidophilic archaeon Sulfolobus solfataricus. Previous research has shown that Sso7d can bind double-stranded DNA without sequence specificity by placing its triple-stranded beta-sheet across the minor groove. We previously found RNase activity both in preparations of Sso7d purified from its natural source and in recombinant, purified protein expressed in Escherichia coli. This paper provides conclusive evidence that supports the assignment of RNase activity to Sso7d, shown by the total absence of activity in the single-point mutants E35L and K12L, despite the preservation of their overall structure under the assay conditions. In keeping with our observation that the residues putatively involved in RNase activity and those playing a role in DNA binding are located on different surfaces of the molecule, the activity was not impaired in the presence of DNA. If a small synthetic RNA was used as a substrate, Sso7d attacked both predicted double- and single-stranded RNA stretches, with no evident preference for specific sequences or individual bases. Apparently, the more readily attacked bonds were those intrinsically more unstable.


Assuntos
Proteínas de Ligação a DNA/metabolismo , Ribonucleases/metabolismo , Substituição de Aminoácidos , Proteínas Arqueais/metabolismo , Catálise , Proteínas de Ligação a DNA/genética , Relação Dose-Resposta a Droga , Ativação Enzimática/efeitos dos fármacos , Estabilidade Enzimática/fisiologia , Escherichia coli/genética , Temperatura Alta , Modelos Moleculares , Mutagênese Sítio-Dirigida , Mutação Puntual , Conformação Proteica , Desnaturação Proteica/fisiologia , RNA de Transferência de Metionina/metabolismo , RNA de Transferência de Metionina/farmacologia , Especificidade por Substrato , Sulfolobus
15.
Mol Microbiol ; 36(6): 1470-80, 2000 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-10931296

RESUMO

Polynucleotide phosphorylase (PNPase, polyribonucleotide nucleotidyltransferase, EC 2.7.7.8) is one of the cold shock-induced proteins in Escherichia coli and pnp, the gene encoding it, is essential for growth at low temperatures. We have analysed the expression of pnp upon cold shock and found a dramatic transient variation of pnp transcription profile: within the first hour after temperature downshift the amount of pnp transcripts detectable by Northern blotting increased more than 10-fold and new mRNA species that cover pnp and the downstream region, including the cold shock gene deaD, appeared; 2 h after temperature downshift the transcription profile reverted to a preshift-like pattern in a PNPase-independent manner. The higher amount of pnp transcripts appeared to be mainly due to an increased stability of the RNAs. The abundance of pnp transcripts was not paralleled by comparable variation of the protein: PNPase steadily increased about twofold during the first 3 h at low temperature, as determined both by Western blotting and enzymatic activity assay, suggesting that PNPase, unlike other known cold shock proteins, is not efficiently translated in the acclimation phase. In experiments aimed at assessing the role of PNPase in autogenous control during cold shock, we detected a Rho-dependent termination site within pnp. In the cold acclimation phase, termination at this site depended upon the presence of PNPase, suggesting that during cold shock pnp is autogenously regulated at the level of transcription elongation.


Assuntos
Temperatura Baixa , Escherichia coli/enzimologia , Regulação Bacteriana da Expressão Gênica , Regulação Enzimológica da Expressão Gênica , Polirribonucleotídeo Nucleotidiltransferase/genética , Processamento Pós-Transcricional do RNA , Transcrição Gênica , Aclimatação , Adaptação Fisiológica , Indução Enzimática , Escherichia coli/genética , Escherichia coli/fisiologia , Perfilação da Expressão Gênica , Polirribonucleotídeo Nucleotidiltransferase/biossíntese , Regiões Promotoras Genéticas , Estabilidade de RNA , RNA Bacteriano , RNA Mensageiro
16.
Hum Mol Genet ; 9(9): 1283-90, 2000 May 22.
Artigo em Inglês | MEDLINE | ID: mdl-10814710

RESUMO

Mucopolysaccharidosis IVA (MPS IVA; OMIM#253000), a lysosomal storage disorder caused by a deficiency of N -acetylgalactosamine-6-sulfate sulfatase (GALNS), has variable clinical phenotypes. To date we have identified 65 missense mutations in the GALNS gene from MPS IVA patients, but the correlation between genotype and phenotype has remained unclear. We studied 17 missense mutations using biochemical approaches and 32 missense mutations, using structural analyses. Fifteen missense mutations and two newly engineered active site mutations (C79S, C79T) were characterized by transient expression analysis. Mutant proteins, except for C79S and C79T, were destabilized and detected as insoluble precursor forms while the C79S and C79T mutants were of a soluble mature size. Mutants found in the severe phenotype had no activity. Mutants found in the mild phenotype had a considerable residual activity (1.3-13.3% of wild-type GALNS activity). Sulfatases, including GALNS, are members of a highly conserved gene family sharing an extensive sequence homology. Thus, a tertiary structural model of human GALNS was constructed from the X-ray crystal structure of N -acetylgalacto-samine-4-sulfatase and arylsulfatase A, using homology modeling, and 32 missense mutations were investigated. Consequently, we propose that there are at least three different reasons for the severe phenotype: (i) destruction of the hydrophobic core or modification of the packing; (ii) removal of a salt bridge to destabilize the entire conformation; (iii) modification of the active site. In contrast, mild mutations were mostly located on the surface of the GALNS protein. These studies shed further light on the genotype-phenotype correlation of MPS IVA and structure-function relationship in the sulfatase family.


Assuntos
Condroitina Sulfatases/genética , Mucopolissacaridose IV/genética , Mucopolissacaridose IV/metabolismo , Mutação de Sentido Incorreto , Sequência de Aminoácidos , Sítios de Ligação/genética , Western Blotting , Condroitina Sulfatases/química , Cristalografia por Raios X , Fibroblastos/metabolismo , Genótipo , Humanos , Modelos Moleculares , Dados de Sequência Molecular , Mutagênese Sítio-Dirigida , Fenótipo , Estrutura Terciária de Proteína , Homologia de Sequência de Aminoácidos , Transfecção
17.
Int J Parasitol ; 30(2): 143-7, 2000 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-10704597

RESUMO

Male gerbils were inoculated intragastrically with embryonated Toxocara canis eggs. They were euthanised, and their eyes were excised at different days p.i. to identify the number of larvae as well as lesions resulting in these organs. In most animals, larvae were detected from day 5 to day 60 p.i. (end of the study). From days 10 to 20 p.i., larvae and haemorrhage were observed in the choroid and in the ciliary process. At days 30 and 40 p.i., some eyes had larvae surrounded by an infiltrate of neutrophils, oedema, haemorrhages and tissue damage in the retina or the ciliary process. On day 60 p.i., there were granulomatous lesions in the retina. This study provides a model for the study of ocular toxocariasis.


Assuntos
Infecções Oculares Parasitárias/veterinária , Gerbillinae , Toxocaríase/patologia , Animais , Olho/patologia , Infecções Oculares Parasitárias/patologia , Masculino , Toxocara canis
18.
Biochemistry ; 38(39): 12709-17, 1999 Sep 28.
Artigo em Inglês | MEDLINE | ID: mdl-10504241

RESUMO

Sso7d is a basic 7-kDa DNA-binding protein from Sulfolobus solfataricus, also endowed with ribonuclease activity. The protein consists of a double-stranded antiparallel beta-sheet, onto which an orthogonal triple-stranded antiparallel beta-sheet is packed, and of a small helical stretch at the C-terminus. Furthermore, the two beta-sheets enclose an aromatic cluster displaying a fishbone geometry. We previously cloned the Sso7d-encoding gene, expressed it in Escherichia coli, and produced several single-point mutants, either of residues located in the hydrophobic core or of Trp23, which is exposed to the solvent and plays a major role in DNA binding. The mutation F31A was dramatically destabilizing, with a loss in thermo- and piezostabilities by at least 27 K and 10 kbar, respectively. Here, we report the solution structure of the F31A mutant, which was determined by NMR spectroscopy using 744 distance constraints obtained from analysis of multidimensional spectra in conjunction with simulated annealing protocols. The most remarkable finding is the change in orientation of the Trp23 side chain, which in the wild type is completely exposed to the solvent, whereas in the mutant is largely buried in the aromatic cluster. This prevents the formation of a cavity in the hydrophobic core of the mutant, which would arise in the absence of structural rearrangements. We found additional changes produced by the mutation, notably a strong distortion in the beta-sheets with loss in several hydrogen bonds, increased flexibility of some stretches of the backbone, and some local strains. On one hand, these features may justify the dramatic destabilization provoked by the mutation; on the other hand, they highlight the crucial role of the hydrophobic core in protein stability. To the best of our knowledge, no similar rearrangement has been so far described as a result of a single-point mutation.


Assuntos
Proteínas Arqueais/química , Proteínas de Ligação a DNA/química , Mutação Puntual , Sulfolobus/química , Sequência de Aminoácidos , Proteínas Arqueais/genética , Proteínas de Ligação a DNA/genética , Escherichia coli/genética , Temperatura Alta , Espectroscopia de Ressonância Magnética , Modelos Moleculares , Dados de Sequência Molecular , Pressão , Estrutura Secundária de Proteína , Proteínas Recombinantes/química , Proteínas Recombinantes/genética
19.
Anal Biochem ; 269(2): 353-8, 1999 May 01.
Artigo em Inglês | MEDLINE | ID: mdl-10222010

RESUMO

Polynucleotide phosphorylase (PNPase) is a prokaryotic enzyme that catalyzes phosphorolysis of polynucleotides with release of NDPs. It is also believed to play a key role in turnover of prokaryotic transcripts, thus regulating gene expression. At the moment, only radioisotopic methods are available for assaying PNPase in crude extracts; these involve incubating [32P]phosphate and poly(A) in the presence of the enzyme, separating [32P]phosphate from [32P]ADP, and quantifying ADP by scintillation counting. Photometric assay using pyruvate kinase and lactate dehydrogenase as auxiliary enzymes is not feasible in crude extracts because of endogenous ATPase activities, which regenerate ADP from the ATP released by pyruvate kinase. Here, we present a simple photometric assay that uses a cyclic detection system which, due to the sequential action of pyruvate kinase and hexokinase, results in an exponential increase of ADP and glucose 6-phosphate. Glucose 6-phosphate is then revealed by a glucose-6-phosphate dehydrogenase reaction. Based on the theoretical model, a linear increase in absorbance is predicted as a function of the square of the reaction time, with a slope proportional to PNPase activity. Experimental data confirmed the theoretical predictions and showed that the assay was quantitative and unquestionably specific. We also devised a simple procedure for determining absolute enzyme activities (expressed in micromoles of product formed per minute) using exact amounts of pure PNPase as internal standards.


Assuntos
Fotometria/métodos , Polirribonucleotídeo Nucleotidiltransferase/análise , Difosfato de Adenosina , Escherichia coli/enzimologia , Glucose-6-Fosfato , Hexoquinase , Fotometria/normas , Polirribonucleotídeo Nucleotidiltransferase/normas , Pseudomonas putida/enzimologia , Piruvato Quinase , Padrões de Referência
20.
Biochemistry ; 37(29): 10493-8, 1998 Jul 21.
Artigo em Inglês | MEDLINE | ID: mdl-9671520

RESUMO

Sso7d from the thermoacidophilic archaebacterium Sulfolobus solfataricus is a small globular protein with a known three-dimensional structure. Inspection of the structure reveals that Phe31 is a member of the aromatic cluster forming the protein hydrophobic core, whereas Trp23 is located on the protein surface and its side chain exposed to the solvent. The thermodynamic consequences of the substitution of these two residues in Sso7d have been investigated by comparing the temperature-induced denaturation of Sso7d with that of three mutants: F31A-Sso7d, F31Y-Sso7d, and W23A-Sso7d. The denaturation processes proved to be reversible for all proteins, and represented well by the two-state N if D transition model in a wide range of pH. All three mutants are less thermally stable than the parent protein; in particular, in the pH range of 5.0-7.0, the F31A substitution leads to a decrease of 24 degreesC in the denaturation temperature, the F31Y substitution to a decrease of 10 degreesC, and the W23A substitution to a decrease of 6 degreesC. A careful thermodynamic analysis of such experimental data is carried out.


Assuntos
Proteínas Arqueais/química , Proteínas de Ligação a DNA/química , Mutagênese Sítio-Dirigida , Sulfolobus/química , Termodinâmica , Alanina/genética , Substituição de Aminoácidos/genética , Proteínas Arqueais/genética , Varredura Diferencial de Calorimetria , Proteínas de Ligação a DNA/genética , Concentração de Íons de Hidrogênio , Concentração Osmolar , Fenilalanina/genética , Desnaturação Proteica , Sulfolobus/genética , Triptofano/genética , Tirosina/genética
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