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1.
Microorganisms ; 12(9)2024 Sep 05.
Artigo em Inglês | MEDLINE | ID: mdl-39338510

RESUMO

Several studies have investigated the multifunctional characteristics of outer membrane vesicles (OMVs), but research on their role in mediating phage-bacteria interactions is limited. Employing Escherichia coli as a model, we engineered a mutant strain overproducing OMVs for protective experiments against phage infections. The addition of exogenous OMVs proved highly effective in safeguarding the bacterial host against various phages, mitigating predatory threats. Screening for phage-resistant strains and adsorption experiments revealed that inhibiting phage adsorption is a crucial pathway through which OMVs protect against phage predation. Although OMVs conferred tolerance to the phage-sensitive strains (those easily infected by phages), they could not restore the phage-resistant strains (those that effectively resist phage infection) to a sensitive phenotype. This study provides valuable insights for the future development of novel biotechnological approaches aimed at utilizing OMVs to protect fermentative strains and reduce the risk of phage contamination.

2.
Ying Yong Sheng Tai Xue Bao ; 35(7): 1877-1886, 2024 Jul 18.
Artigo em Inglês | MEDLINE | ID: mdl-39233417

RESUMO

Investigating the wind speed flow field and aerodynamic characteristics of shelterbelts with different structural features is of significant importance for the rational arrangement of shelterbelts and the mitigation of wind-blown sand disasters. Considering five cross-sectional shapes of shelterbelts (rectangle, windward right-angle triangle, leeward right-angle triangle, isosceles triangle, and parabolic) and four layout forms (single shelterbelt, L-shaped network, U-shaped network, and rectangular network), we conducted computational fluid dynamics (CFD) simulations using the large eddy simulation (LES) turbulence model to understand mean wind speed flow field and turbulence structure of shelterbelts with different structural features, and investigated the effects of shelterbelt cross-sectional shapes and layout forms on windbreak indicators, such as protection distance and area. We considered tree canopies as porous media and conducted simulation with the 'Tsujimatsu' shelterbelt in Japan with a total height (H) of 7 m, canopy height of 5.8 m, and a canopy base width of 2 m. The results showed that the average relative errors of mean wind speed and turbulent kinetic energy at different heights obtained by numerical simulations and field measurement were small, being 5.5% and 12%, respectively, indicating that the porous medium canopy model successfully reproduced the mean wind speed and turbulent kinetic energy in the leeward area of the shelterbelt. The rectangular cross-section shelterbelt, with the largest canopy volume, significantly obstructed airflow. The mean wind speed and turbulent kinetic energy showed a notable reduction in the leeward area near the shelterbelt, especially in the upper region (z≥0.5H, where z denoted the height), showing the largest protection range. The parabolic cross-section shelterbelt ranked second in terms of protection range, followed by shelterbelts with windward right-angle, leeward right-angle, and isosceles triangular cross-sections. In the downstream area where horizontal distance x≥10H, the mean wind speed and turbulent kinetic energy of shelterbelts with different cross-sectional shapes tended to be the same. Comparing the flow field structures of single shelterbelts and L-shaped, U-shaped, and rectangular networks, it revealed that the more shelterbelts oriented perpendicular to the incoming wind speed, the more pronounced the wind speed attenuation behind the canopy, a longer distance would be required for airflow to recover to the incoming wind speed. In contrast, the wind protection effect of shelterbelts paralleled to the wind direction was extremely limited, making the U-shaped and rectangular networks more effective in wind protection than single shelterbelts and L-shaped networks. The findings would provide references for the structural configuration and optimal layout of shelterbelt systems.


Assuntos
Simulação por Computador , Florestas , Vento , Modelos Teóricos , Conservação dos Recursos Naturais , Pinus/crescimento & desenvolvimento , Ecossistema , Árvores/crescimento & desenvolvimento , China
3.
Nat Chem ; 2024 Aug 12.
Artigo em Inglês | MEDLINE | ID: mdl-39134777

RESUMO

Photocatalytic overall water splitting holds great promise for solar-to-hydrogen conversion. Maintaining charge separation is a major challenge but is key to unlocking this potential. Here we discovered a metal-organic framework (MOF) that shows suppressed charge recombination. This MOF features electronically insulated Zn2+ nodes and two chemically equivalent, yet crystallographically independent, linkers. These linkers behave as an electron donor-acceptor pair with non-overlapping band edges. Upon photoexcitation, the MOF undergoes a dynamic excited-state structural twist, inducing orbital rearrangements that forbid radiative relaxation and thereby promote a long-lived charge-separated state. As a result, the MOF achieves visible-light photocatalytic overall water splitting, in the presence of co-catalysts, with an apparent quantum efficiency of 3.09 ± 0.32% at 365 nm and shows little activity loss in 100 h of consecutive runs. Furthermore, the dynamic excited-state structural twist is also successfully extended to other photocatalysts. This strategy for suppressing charge recombination will be applicable to diverse photochemical processes beyond overall water splitting.

4.
World J Microbiol Biotechnol ; 40(9): 284, 2024 Jul 29.
Artigo em Inglês | MEDLINE | ID: mdl-39073496

RESUMO

Bacterial ghosts (BGs) are described as bacterial cell envelopes that retain their structure but lack cytoplasmic contents. The study of BGs spans multiple disciplinary domains, and the development of BG production techniques to obtain ample and stable BG samples holds significant implications for probing the biological characteristics of BGs, devising novel disease treatment strategies, and leveraging their industrial applications. Numerous products encoded within bacteriophage (phage) genomes possess the capability to lyse bacteria, thereby inducing BG formation primarily via disruption of bacterial cell wall integrity. This review comprehensively surveys the utilization of phage-encoded proteins in BG production techniques, encompassing methodologies such as phage E protein-mediated lysis, perforin protein-induced lysis, and strategies combining E protein with holin-endolysin systems. Additionally, discussions and summaries are provided on the current applications, challenges, and modification strategies associated with different techniques. Through a focused exploration of BG production techniques, with an emphasis on precise manipulation of BG formation using phage-encoded protein technologies, this study aims to furnish robust tools and methodologies for delving into the mechanisms underlying BG formation, as well as for the development of novel therapeutic strategies and applications based on BGs.


Assuntos
Bactérias , Bacteriófagos , Proteínas Virais , Bacteriófagos/genética , Bacteriófagos/metabolismo , Proteínas Virais/genética , Proteínas Virais/metabolismo , Bactérias/virologia , Bactérias/metabolismo , Bactérias/genética , Parede Celular/metabolismo , Endopeptidases/metabolismo , Bacteriólise
5.
Biomater Res ; 28: 0028, 2024.
Artigo em Inglês | MEDLINE | ID: mdl-38715912

RESUMO

The field of immunotherapy, particularly immune checkpoint blockade (ICB), holds immense potential in mitigating the progression of cancer. However, the challenges of insufficient tumor antigen production and the immunosuppressive state in the tumor microenvironment substantially impede patients from deriving benefits. In this research, we present a tumor-microenvironment-modulation manganese-based nanosystem, PEG-MnMOF@PTX, aiming to improve the responsiveness of ICB. Under acidic conditions, the released Mn2+ accomplishes multiple objectives. It generates toxic hydroxyl radicals (•OH), together with the released paclitaxel (PTX), inducing immunogenic cell death of tumor cells and normalizing tumor blood vessels. Concurrently, it facilitates the in situ generation of oxygen (O2) from hydrogen peroxide (H2O2), ameliorating the microenvironmental immunosuppression and increasing the efficacy of immunotherapy. In addition, this study demonstrates that PEG-MnMOF@PTX can promote the maturation of dendritic cells and augment the infiltration of cytotoxic T lymphocytes through activation of the cyclic guanosine 5'-monophosphate-adenosine 5'-monophosphate synthase (cGAS) and interferon gene stimulator (STING) pathways, namely cGAS-STING pathways, thereby heightening the sensitivity to ICB immunotherapy. The findings of this study present a novel paradigm for the progress in cancer immunotherapy.

6.
Pathogens ; 13(5)2024 Apr 27.
Artigo em Inglês | MEDLINE | ID: mdl-38787213

RESUMO

BACKGROUND: Animal manure-based compost is a valuable organic fertilizer and biological soil amendment. To ensure the microbiological safety of compost products, the effectiveness of competitive exclusion microorganisms (CE) in reducing Escherichia coli O157:H7 in dairy manure-based compost was evaluated. METHODS: A cocktail of E. coli O157:H7 strains were inoculated into dairy compost along with CE strains isolated from compost, and the reduction in E. coli O157:H7 by CE was determined in compost with 20%, 30%, and 40% moisture levels at 22 °C and 30 °C under laboratory conditions, as well as in fall, winter, and summer seasons under greenhouse settings. RESULTS: Under lab conditions, CE addition resulted in 1.1-3.36 log reductions in E. coli O157:H7 in compost, with enhanced pathogen reduction by higher moisture and lower temperature. In the greenhouse, >99% of the E. coli O157:H7 population in compost with ≥30% moisture due to cross-contamination can be effectively inactivated by CE within 2 days during colder seasons. However, it took ≥8 days to achieve the same level of reduction for heat-adapted E. coli O157:H7 cells. CONCLUSIONS: Our results demonstrated that the competitive exclusion of microorganisms can be an effective tool for controlling foodborne pathogens in compost and reducing the potential for soil and crop contamination.

7.
Front Cell Infect Microbiol ; 14: 1296777, 2024.
Artigo em Inglês | MEDLINE | ID: mdl-38469347

RESUMO

Phage therapy is a potential approach in the biocontrol of foodborne pathogens. However, the emergence of phage resistance and the narrow host range of most phage isolates continue to limit the antimicrobial efficacy of phages. Here, we investigated the potential of the pqsA gene, encoding the anthranilate-CoA ligase enzyme, as an adjuvant for phage therapy. The knockout of the pqsA gene significantly enhanced the bactericidal effect of phages vB_Pae_QDWS and vB_Pae_S1 against Pseudomonas aeruginosa. Under phage infection pressure, the growth of the PaΔpqsA was significantly inhibited within 8 h compared to the wild-type PAO1. Furthermore, we found that altering phage adsorption is not how PaΔpqsA responds to phage infection. Although pqsA represents a promising target for enhancing phage killing, it may not be applicable to all phages, such as types vB_Pae_W3 and vB_Pae_TR. Our findings provide new material reserves for the future design of novel phage-based therapeutic strategies.


Assuntos
Bacteriófagos , Terapia por Fagos , Infecções por Pseudomonas , Fagos de Pseudomonas , Humanos , Pseudomonas aeruginosa/genética , Fagos de Pseudomonas/genética , Infecções por Pseudomonas/terapia , Mutação
8.
Adv Sci (Weinh) ; 11(15): e2306031, 2024 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-38342617

RESUMO

Overproduction of reactive oxygen species (ROS), metal ion accumulation, and tricarboxylic acid cycle collapse are crucial factors in mitochondria-mediated cell death. However, the highly adaptive nature and damage-repair capabilities of malignant tumors strongly limit the efficacy of treatments based on a single treatment mode. To address this challenge, a self-reinforced bimetallic Mito-Jammer is developed by incorporating doxorubicin (DOX) and calcium peroxide (CaO2) into hyaluronic acid (HA) -modified metal-organic frameworks (MOF). After cellular, Mito-Jammer dissociates into CaO2 and Cu2+ in the tumor microenvironment. The exposed CaO2 further yields hydrogen peroxide (H2O2) and Ca2+ in a weakly acidic environment to strengthen the Cu2+-based Fenton-like reaction. Furthermore, the combination of chemodynamic therapy and Ca2+ overload exacerbates ROS storms and mitochondrial damage, resulting in the downregulation of intracellular adenosine triphosphate (ATP) levels and blocking of Cu-ATPase to sensitize cuproptosis. This multilevel interaction strategy also activates robust immunogenic cell death and suppresses tumor metastasis simultaneously. This study presents a multivariate model for revolutionizing mitochondria damage, relying on the continuous retention of bimetallic ions to boost cuproptosis/immunotherapy in cancer.


Assuntos
Peróxido de Hidrogênio , Neoplasias , Humanos , Espécies Reativas de Oxigênio , Trifosfato de Adenosina , Morte Celular , Mitomicina , Microambiente Tumoral
9.
Adv Mater ; 36(21): e2313029, 2024 May.
Artigo em Inglês | MEDLINE | ID: mdl-38353366

RESUMO

Activation of the cyclic GMP-AMP synthase-stimulator of interferon genes (cGAS-STING) pathway has emerged as an efficient strategy to improve the therapeutic outcomes of immunotherapy. However, the "constantly active" mode of current STING agonist delivery strategies typically leads to off-target toxicity and hyperimmunity. To address this critical issue, herein a metal-organic frameworks-based nanoagonist (DZ@A7) featuring tumor-specific and near-infrared (NIR) light-enhanced decomposition is constructed for precisely localized STING activation and photodynamic-metalloimmunotherapy. The engineered nanoagonist enabled the generation of mitochondria-targeted reactive oxygen species under NIR irradiation to specifically release mitochondrial DNA (mtDNA) and inhibit the repair of nuclear DNA via hypoxia-responsive drugs. Oxidized tumor mtDNA serves as an endogenous danger-associated molecular pattern that activates the cGAS-STING pathway. Concurrently, NIR-accelerated zinc ions overloading in cancer cells further enhance the cGAS enzymatic activity through metalloimmune effects. By combining the synergistically enhanced activation of the cGAS-STING pathway triggered by NIR irradiation, the engineered nanoagonist facilitated the maturation of dendritic cells and infiltration of cytotoxic T lymphocytes for primary tumor eradication, which also established a long-term anti-tumor immunity to suppress tumor metastasis. Therefore, the developed nanoagonist enabled NIR-triggered, agonist-free, and tandem-amplified activation of the cGAS-STING pathway, thereby offering a distinct paradigm for photodynamic-metalloimmunotherapy.


Assuntos
Imunoterapia , Raios Infravermelhos , Proteínas de Membrana , Estruturas Metalorgânicas , Nucleotidiltransferases , Fotoquimioterapia , Fotoquimioterapia/métodos , Animais , Proteínas de Membrana/metabolismo , Nucleotidiltransferases/metabolismo , Camundongos , Humanos , Estruturas Metalorgânicas/química , Estruturas Metalorgânicas/farmacologia , Linhagem Celular Tumoral , Espécies Reativas de Oxigênio/metabolismo , DNA Mitocondrial/metabolismo , Neoplasias/terapia , Neoplasias/tratamento farmacológico , Neoplasias/patologia , Nanopartículas/química , Fármacos Fotossensibilizantes/química , Fármacos Fotossensibilizantes/farmacologia , Fármacos Fotossensibilizantes/uso terapêutico
10.
iScience ; 27(1): 108723, 2024 Jan 19.
Artigo em Inglês | MEDLINE | ID: mdl-38283328

RESUMO

The NACHT, LRR, and PYD domains-containing protein 3 (NLRP3) inflammasome has been involved in the pathogenesis of various chronic liver diseases. However, its role in hepatitis B virus (HBV)-associated hepatitis remains unknown. Here we demonstrate the synergistic effect of HBV with potential intrahepatic danger signals on NLRP3 inflammasome activation. HBV exposure at the appropriate temporal points enhances potassium efflux-dependent NLRP3 inflammasome activation in macrophages and also increases NLRP3 inflammasome-mediated inflammation in HBV-transgenic mouse model. HBV-mediated synergism with intrahepatic signals represented by ATP molecules on NLRP3 activation was observed via relevance analysis, confocal microscopy, and co-immunoprecipitation, and its effector cytokines exhibit positive associations with hepatic inflammation in patients with severe hepatitis B. Furthermore, the synergism of HBV on NLRP3 inflammasome activation owes to increased sodium influx into macrophages. Our data demonstrate that HBV contributes to hepatic inflammation via sodium influx-dependent synergistic activation of NLRP3 inflammasome, which provides a deeper understanding of immune pathogenesis in HBV-associated hepatitis.

11.
Sheng Wu Gong Cheng Xue Bao ; 39(9): 3876-3886, 2023 Sep 25.
Artigo em Chinês | MEDLINE | ID: mdl-37805861

RESUMO

This study investigated the application of poly(N-isopropylacrylamide)-based interpenetrating network temperature-sensitive hydrogels (notation: IPNT) as the delivery vehicle for phage endolysin Lys84 and the potential of drug-loaded hydrogels as antimicrobial materials. Interpenetrating network temperature-sensitive hydrogels were prepared by free radical polymerization of sodium alginate and N-isopropylacrylamide. Drug-loaded hydrogels (IPNT-Lys84) were obtained by dry soaking method with the endolysin Lys84 of Staphylococcus aureus phage. The physical properties of the hydrogels with and without drug loading were characterized by infrared spectroscopy, scanning electron microscopy, and differential scanning calorimetry. The swelling and deswelling of the hydrogels as well as the release of endolysin Lys84 were investigated. Moreover, the antibacterial properties of IPNT-Lys84 hydrogels at different temperatures and concentrations of the drug solution were studied. The results showed that IPNT-Lys84 hydrogel had uniform pores and a low critical solubility temperature (LCST) of 32 ℃. The equilibrium swelling of the hydrogel was 30 g/g, and the water loss rate was 88% upon deswelling. The release rate of endolysin reached more than 70% within 6 h at 37 ℃. The bactericidal rate of IPNT-Lys84 hydrogel was over 99.9%. The research results showed the feasibility of using IPNT to deliver the endolysin Lys84, and IPNT-Lys84 hydrogel might be an effective antimicrobial material against multi-drug resistant Staphylococcus aureus.


Assuntos
Anti-Infecciosos , Bacteriófagos , Staphylococcus aureus Resistente à Meticilina , Hidrogéis/química , Temperatura
12.
Microb Pathog ; 183: 106279, 2023 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-37549798

RESUMO

Clostridium perfringens, a common foodborne pathogen, exhibit high-stress resistance. The prevailing reliance on antibiotics in the farming industry for its prevention and control has led to increasing concerns over antibiotic residue and bacterial resistance. Bacteriophages that possess specific lytic activity against C. perfringens are of significant interest. Here, a novel C. perfringens phage, named vB_CP_qdyz_P5, was isolated and characterized. The phage displayed high stability at temperatures below 70 °C and pH levels ranging from 4 to 12. Genome analysis revealed that vB_CP_qdyz_P5 has a double-stand DNA of 18,888 bp with a G + C composition of 28.8%. Among the 27 identified opening reading frames (ORFs), eight were found to be functional genes. BLASTn analysis showed that vB_CP_qdyz_P5 is closely related to phage DCp1, with a genome homology coverage of 83%. Phylogenetic analysis indicated that vB_CP_qdyz_P5 may be a novel phage of the family Guelinviridae, Susfortunavirus. This study provides important preliminary information for further research on the potential use of vB_CP_qdyz_P5 in protecting against C. perfringens and maintaining intestinal health.


Assuntos
Bacteriófagos , Bacteriófagos/genética , Clostridium perfringens/genética , Filogenia , Genoma Viral , DNA , Antibacterianos
13.
Int J Food Microbiol ; 403: 110304, 2023 Oct 16.
Artigo em Inglês | MEDLINE | ID: mdl-37429117

RESUMO

Quorum sensing (QS) plays an important role in phage-host interactions. Shewanella baltica can't produce the N-acyl-homoserine lactones (AHLs) signal molecules but can eavesdrop on exogenous AHLs through its LuxR receptor. However, no clear evidence exists regarding the involvement of AHLs-mediated QS systems in S. baltica in regulating phage infection. Here, we report that AHLs modulated the phage resistance of S. baltica OS155. Specifically, we characterized a S. baltica phage vB_Sb_QDWS and preliminarily identified that lipopolysaccharide (LPS) is an important receptor for phage vB_Sb_QDWS. AHLs could protect S. baltica against phage infection by decreasing LPS-mediated phage adsorption. The expression of genes galU and tkt, which are essential for LPS synthesis, down-regulated significantly in response to AHLs autoinducers. Our finding confirms the important roles of QS in virus-host interactions and would be helpful to develop novel phage strategies for food spoilage control.


Assuntos
Acil-Butirolactonas , Proteínas de Bactérias , Bacteriófagos , Shewanella , Transativadores , Percepção de Quorum , Shewanella/metabolismo , Shewanella/virologia , Transdução de Sinais , Acil-Butirolactonas/metabolismo , Proteínas Repressoras/metabolismo , Transativadores/metabolismo , Bacteriófagos/fisiologia , Ligação Viral , Receptores Virais/metabolismo , Proteínas de Bactérias/metabolismo , Lipopolissacarídeos/metabolismo , Expressão Gênica
14.
PLoS One ; 18(5): e0285494, 2023.
Artigo em Inglês | MEDLINE | ID: mdl-37163544

RESUMO

MicroRNAs (miRNAs) widely participate in plant growth and development. The miR396 family, one of the most conserved miRNA families, remains poorly understood in sorghum. To reveal the evolution and expression pattern of Sbi-miR396 gene family in sorghum, bioinformatics analysis and target gene prediction were performed on the sequences of the Sbi-miR396 gene family members. The results showed that five Sbi-miR396 members, located on chromosomes 4, 6, and 10, were identified at the whole-genome level. The secondary structure analysis showed that the precursor sequences of all five Sbi-miR396 potentially form a stable secondary stem-loop structure, and the mature miRNA sequences were generated on the 5' arm of the precursors. Sequence analysis identified the mature sequences of the five sbi-miR396 genes were high identity, with differences only at the 1st, 9th and 21st bases at the 5' end. Phylogenetic analysis revealed that Sbi-miR396a, Sbi-miR396b, and Sbi-miR396c were clustered into Group I, and Sbi-miR396d and Sbi-miR396e were clustered into Group II, and all five sbi-miR396 genes were closely related to those of maize and foxtail millet. Expression analysis of different tissue found that Sbi-miR396d/e and Sbi-miR396a/b/c were preferentially and barely expressed, respectively, in leaves, flowers, and panicles. Target gene prediction indicates that the growth-regulating factor family members (SbiGRF1/2/3/4/5/6/7/8/10) were target genes of Sbi-miR396d/e. Thus, Sbi-miR396d/e may affect the growth and development of sorghum by targeting SbiGRFs. In addition, expression analysis of different tissues and developmental stages found that all Sbi-miR396 target genes, SbiGRFs, were barely expressed in leaves, root and shoot, but were predominantly expressed in inflorescence and seed development stage, especially SbiGRF1/5/8. Therefore, inhibition the expression of sbi-miR396d/e may increase the expression of SbiGRF1/5/8, thereby affecting floral organ and seed development in sorghum. These findings provide the basis for studying the expression of the Sbi-mir396 family members and the function of their target genes.


Assuntos
Proteínas de Arabidopsis , Arabidopsis , MicroRNAs , Sorghum , Proteínas de Arabidopsis/genética , Arabidopsis/genética , Filogenia , Regulação da Expressão Gênica de Plantas , Plantas Geneticamente Modificadas/genética , MicroRNAs/genética , MicroRNAs/metabolismo
15.
J Microbiol ; 61(5): 559-569, 2023 May.
Artigo em Inglês | MEDLINE | ID: mdl-37213024

RESUMO

Escherichia coli is a preferred strain for recombinant protein production, however, it is often plagued by phage infection during experimental studies and industrial fermentation. While the existing methods of obtaining phage-resistant strains by natural mutation are not efficient enough and time-consuming. Herein, a high-throughput method by combining Tn5 transposon mutation and phage screening was used to produce Escherichia coli BL21 (DE3) phage-resistant strains. Mutant strains PR281-7, PR338-8, PR339-3, PR340-8, and PR347-9 were obtained, and they could effectively resist phage infection. Meanwhile, they had good growth ability, did not contain pseudolysogenic strains, and were controllable. The resultant phage-resistant strains maintained the capabilities of producing recombinant proteins since no difference in mCherry red fluorescent protein expression was found in phage-resistant strains. Comparative genomics showed that PR281-7, PR338-8, PR339-3, and PR340-8 mutated in ecpE, nohD, nrdR, and livM genes, respectively. In this work, a strategy was successfully developed to obtain phage-resistant strains with excellent protein expression characteristics by Tn5 transposon mutation. This study provides a new reference to solve the phage contamination problem.


Assuntos
Bacteriófagos , Escherichia coli , Escherichia coli/genética , Escherichia coli/metabolismo , Mutagênese , Proteínas Recombinantes/genética , Mutação
16.
Mol Genet Genomics ; 298(5): 1037-1044, 2023 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-37247008

RESUMO

Bacteriophages are potential antibiotic substitutes for the treatment of antibiotic resistant bacteria. Here, we report the genome sequences of a double-stranded DNA podovirus vB_Pae_HB2107-3I against clinical multi-drug resistant Pseudomonas aeruginosa. Phage vB_Pae_HB2107-3I remained stable over a wide range of temperatures (37-60 °C) and pH values (pH 4-12). At MOI of 0.01, the latent period of vB_Pae_HB2107-3I was 10 min, and the final titer reached about 8.1 × 109 PFU/mL. The vB_Pae_HB2107-3I genome is 45,929 bp, with an average G + C content of 57%. A total of 72 open reading frames (ORFs) were predicted, of which 22 ORFs have a predicted function. Genome analyses confirmed the lysogenic nature of this phage. Phylogenetic analysis revealed that phage vB_Pae_HB2107-3I was a novel member of Caudovirales infecting P. aeruginosa. The characterization of vB_Pae_HB2107-3I enrich the research on Pseudomonas phages and provide a promising biocontrol agent against P. aeruginosa infections.


Assuntos
Bacteriófagos , Bacteriófagos/genética , Pseudomonas aeruginosa/genética , Filogenia , Genoma Viral/genética , Antibacterianos , Fases de Leitura Aberta/genética
17.
J Am Chem Soc ; 145(17): 9665-9671, 2023 May 03.
Artigo em Inglês | MEDLINE | ID: mdl-37083367

RESUMO

The fabricating of metal-organic frameworks (MOFs) that integrate high stability and functionality remains a long-term pursuit yet a great challenge. Herein, we develop a linker desymmetrization strategy to construct highly stable porphyrinic MOFs, namely, USTC-9 (USTC represents the University of Science and Technology of China), presenting the same topological structure as the well-known PCN-600 that readily loses crystallinity in air or upon conventional activation. For USTC-9, the involved porphyrinic linker (TmCPP-M) with carboxylate groups located in the meta-position presents a chair-shaped conformation with lower C2h symmetry than that (D4h) of the common porphyrinic carboxylate (TCPP) linker in PCN-600. As a result, the wrinkled and interlocked linker arrangements collectively contribute to the remarkable stability of USTC-9. Given the high stability and porosity as well as Lewis acidity, USTC-9(Fe) demonstrates its excellent performance toward catalytic CO2 cycloaddition with diverse epoxides at moderate temperature and atmospheric pressure.

18.
Microb Pathog ; 180: 106111, 2023 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-37084823

RESUMO

Cutibacterium acnes (C. acnes) is a symbiotic bacterium that plays an important role in the formation of acn e inflammatory lesions. As a common component of the acne microbiome, C. acnes phages have the potential to make a significant contribution to treating antibiotic-resistant strains of C. acnes. However, little is known about their genetic composition and diversity. In this study, a new lytic phage, Y3Z, infecting C. acne, was isolated and characterized. Electron microscopy analysis revealed this phage is a siphovirus. Phage Y3Z is composed of 29,160 bp with a GC content of 56.32%. The genome contains 40 open reading frames, 17 of which had assigned functions, while no virulence-related genes, antibiotic resistance genes or tRNA were identified. The one-step growth curve showed the burst size was 30 PFU (plaque-forming unit)/cell. And it exhibited tolerance over a broad range of pH and temperature ranges. Phage Y3Z could infect and lyse all C. acnes isolates tested, though the host range of PA6 was restricted to C. acnes. Based on the phylogenetic and comparative genomic analyses, Y3Z may represent a new siphovirus infecting C. acnes. Characterization of Y3Z will enrich our knowledge about the diversity of C. acnes phages and provide a potential arsenal for thetreatment of acne infection.


Assuntos
Acne Vulgar , Bacteriófagos , Humanos , Genoma Viral , Filogenia , Propionibacterium acnes/genética , Acne Vulgar/genética , Acne Vulgar/microbiologia
19.
J Basic Microbiol ; 63(5): 530-541, 2023 May.
Artigo em Inglês | MEDLINE | ID: mdl-37032321

RESUMO

Salmonella enterica contamination is a primary cause of global food poisoning. Using phages as bactericidal alternatives to antibiotics could confront the issue of drug resistance. However, the problem of phage resistance, especially mutant strains with multiple phage resistance, is a critical barrier to the practical application of phages. In this study, a library of EZ-Tn5 transposable mutants of susceptible host S. enterica B3-6 was constructed. After the infestation pressure of a broad-spectrum phage TP1, a mutant strain with resistance to eight phages was obtained. Analysis of the genome resequencing results revealed that the SefR gene was disrupted in the mutant strain. The mutant strain displayed a reduced adsorption rate of 42% and a significant decrease in swimming and swarming motility, as well as a significantly reduced expression of the flagellar-related FliL and FliO genes to 17% and 36%, respectively. An uninterrupted form of the SefR gene was cloned into vector pET-21a (+) and used for complementation of the mutant strain. The complemented mutant exhibited similar adsorption and motility as the wild-type control. These results suggest that the disrupted flagellar-mediated SefR gene causes an adsorption inhibition, which is responsible for the phage-resistant phenotype of the S. enterica transposition mutant.


Assuntos
Bacteriófagos , Salmonella enterica , Mutação Silenciosa , Mutação , Antibacterianos/farmacologia
20.
Int J Biol Macromol ; 233: 123589, 2023 Apr 01.
Artigo em Inglês | MEDLINE | ID: mdl-36764348

RESUMO

Wood is a natural material with low cost and easy recovery, which porous, layered, excellent structure and mechanical properties make it possible to apply in wastewater treatment. We have successfully grown MoS2 on natural wood containing porous cellulose and introduced the high conductivity circuit path provided by Ni nanoparticles to construct a new piezoelectric three-dimensional wood block for the efficient degradation of tetracycline. Ni/MoS2/Wood exhibited excellent piezo-catalytic degradation performance, and the degradation rate of tetracycline reached 95.96 % (k = 0.0411 min-1) under ultrasonic vibration. After 5 cycles, the degradation rate still reached 90.20 %. In addition, Ni/MoS2/Wood was used as the reactor filler to degrade tetracycline through piezoelectric response triggered by hydrodynamic force, and the degradation rate reached 90.27 % after 60 min. Further, the mechanism and the possible degradation pathways of tetracycline degradation were proposed. This low-cost, recyclable and stable three-dimensional wood block piezoelectric material provides a new idea for the practical application of wastewater treatment.


Assuntos
Compostos Heterocíclicos , Molibdênio , Porosidade , Madeira , Tetraciclina , Antibacterianos , Catálise , Celulose
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