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Amonton's law of friction states that the friction force is proportional to the normal force in magnitude, and the slope gives a constant friction coefficient. In this work, with molecular dynamics simulation, we study how the kinetic friction at the nanoscale deviates qualitatively from the relation. Our simulation demonstrates that the friction behavior between a nanoscale AFM tip and an elastic graphene surface is regulated by the coupling of the applied normal force and the substrate deformability. First, it is found that the normal load-induced substrate deformation could lower friction at low load while increasing it at high load. In addition, when the applied force exceeds a certain threshold another abrupt change in friction behavior is observed, i.e., the stick-slip friction changes to the paired stick-slip friction. The unexpected change in friction behavior is then ascribed to the change of the microscopic contact states between the two surfaces: the increase in normal force and the substrate deformability together lead to a change in the energy landscape experienced by the tip. Finally, the Prandtl-Tomlinson model also validates that the change in friction behavior can be interpreted in terms of the energy landscape.
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To address an accurate detection of heavy metal ions in Baijiu production, a nitrogen-doping carbon quantum dots (N-CQDs) was prepared by hydrothermal method from citric acid and urea. The as-prepared N-CQDs had an average particle size of 2.74 nm, and a large number of functional groups (amino, carbonyl group, etc.) attached on its surface, which obtained a 9.6% of quantum yield (QY) with relatively high and stable fluorescence performance. As a fluorescent sensor, the fluorescence of N-CQDs at 380 nm excitation wavelength could be quenched quantitatively by adding Cu2+, due to the dynamic quenching of electron transfer caused by the binding of amine groups and Cu2+, which showed excellent sensitivity and selectivity to Cu2+ in the range of 0.5-5 µM with a detection limit (LOD) of 0.032 µM. In addition, the N-CQDs as well as could be applied to quantitative determine alcohol content in the range of 10-80 V/V% depending on the fluorescence enhancement. Upon the experiment, the fluorescent mechanism was studied by Molecular dynamics (MD) simulations, which demonstrated that solvent effect played an influential role on sensing alcohol content in Baijiu. Overall, the work provided a theoretically guide for the design of fluorescence sensors to monitor heavy metal ion in liquid drinks and sense alcohol content.
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While the filtering and accumulation effects of the extracellular matrix (ECM) on nanoparticles (NPs) have been experimentally observed, the detailed interactions between NPs and specific biomolecules within the ECM remain poorly understood and pose challenges for in vivo molecular-level investigations. Herein, we adopt molecular dynamics simulations to elucidate the impacts of methyl-, hydroxy-, amine-, and carboxyl-modified gold NPs on the cell-binding domains of fibronectin (Fn), an indispensable component of the ECM for cell attachment and signaling. Simulation results show that NPs can specifically bind to distinct Fn domains, and the strength of these interactions depends on the physicochemical properties of NPs. NP-NH3+ exhibits the highest affinity to domains rich in acidic residues, leading to strong electrostatic interactions that induce severe deformation, potentially disrupting the normal functioning of Fn. NP-CH3 and NP-COO- selectively occupy the RGD/PHSRN motifs, which may hinder their recognition by integrins on the cell surface. Additionally, NPs can disrupt the dimerization of Fn through competing for residues at the dimer interface or by diminishing the shape complementarity between dimerized proteins. The mechanical stretching of Fn, crucial for ECM fibrillogenesis, is suppressed by NPs due to their local rigidifying effect. These results provide valuable molecular-level insights into the impacts of various NPs on the ECM, holding significant implications for advancing nanomedicine and nanosafety evaluation.
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Fibronectinas , Nanopartículas , Fibronectinas/química , Integrinas/metabolismo , Matriz Extracelular/metabolismo , Transdução de SinaisRESUMO
A capillarity-induced negative pressure is of general importance for understanding the phase behaviors of liquids in small pores and cracks. A unique example is the embolism in the xylem of plants and the cavitation at the limiting negative pressure generated by evaporation of water from nanocapillaries in the cell walls of leaves. In this work, by combining the effect of a capillary and cavitation together, we demonstrate with molecular dynamics (MD) simulations that capillarity is able to induce spontaneous cavitation in the presence of hydrophobic heterogeneities. Our simulation results reveal separately how the capillary generates a negative pressure and how the generated negative pressure affects the onset of cavitation. We then interpret the cavitation mechanism and determine the occurrence of cavitation as a function of the hydrophobicity of the nucleating substrates where the cavitation initiates and as a function of the hydrophilicity of the capillary tube from which the negative pressure generates. Our results reveal that the capillary-induced cavitation can be described well with a heterogeneous nucleation mechanism, within the framework of classical nucleation theory.
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Electrochemical gas-evolving reactions have been widely used for industrial energy conversion and storage processes. Gas bubbles form frequently at the electrode surface due to a small gas solubility, thereby reducing the effective reaction area and increasing the over-potential and ohmic resistance. However, the growth and motion mechanisms for tiny gas bubbles on the electrode remains elusive. Combining molecular dynamics (MD) and fluid dynamics simulations (CFD), we show that there exists a lateral solutal Marangoni force originating from an asymmetric distribution of dissolved gas near the bubble. Both MD and CFD simulations deliver a similar magnitude of the Marangoni force of â¼0.01 nN acting on the bubble. We demonstrate that this force may lead to lateral bubble oscillations and analyze the phenomenon of dynamic self-pinning of bubbles at the electrode boundary.
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As the physicochemical properties of ultrafine bubble systems are governed by their size, it is crucial to determine the size and distribution of such bubble systems. At present, the size or size distribution of nanometer-sized bubbles in suspension is often measured by either dynamic light scattering or the nanoparticle tracking analysis. Both techniques determine the bubble size via the Einstein-Stokes equation based on the theory of the Brownian motion. However, it is not yet clear to which extent the Einstein-Stokes equation is applicable for such ultrafine bubbles. In this work, using atomic molecular dynamics simulation, we evaluate the applicability of the Einstein-Stokes equation for gas nanobubbles with a diameter less than 10 nm, and for a comparative analysis, both vacuum nanobubbles and copper nanoparticles are also considered. The simulation results demonstrate that the diffusion coefficient for rigid nanoparticles in water is found to be highly consistent with the Einstein-Stokes equation, with slight deviation only found for nanoparticle with a radius less than 1 nm. For nanobubbles, including both methane and vacuum nanobubbles, however, large deviation from the Einstein-Stokes equation is found for the bubble radius larger than 3 nm. The deviation is attributed to the deformability of large nanobubbles that leads to a cushioning effect for collision-induced bubble diffusion.
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Through employing molecular dynamics, in this work, we study how a two-component surfactant mixture cooperatively reduces the interfacial tension of a flat vapor-liquid interface. Our simulation results show that in the presence of a given insoluble surfactant, adding a secondary surfactant would either further reduce interfacial tension, indicating a positive synergistic effect, or increase the interfacial tension instead, indicating a negative synergistic effect. The synergism of the surfactant mixture in lowering surface tension is found to depend strongly on the structure complementary effect between different surfactant components. The synergistic mechanisms are then interpreted with minimization of the bending free energy of the composite surfactant monolayer via cooperatively changing the monolayer spontaneous curvature. By roughly describing the monolayer spontaneous curvature with the balanced distribution of surfactant heads and tails, we confirm that the positive synergistic effect in lowering surface tension is featured with the increasingly symmetric head-tail distributions, while the negative synergistic effect is featured with the increasingly asymmetric head-tail distributions. Furthermore, our simulation results indicate that minimal interfacial tension can only be observed when the spontaneous curvature is nearly zero.
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Based on the generalized Darcy model, here we develop a linear one-dimensional (1D) composite model to predict the effects of the inserted balloon under REBOA operations on the dynamic characteristics of blood flow in flexible arterial networks. We first consider the effect of the decrease of cardiac output under different degrees of blood loss through employing the fourth-order lumped parameter model of cardiovascular system. Then, the effect of the inserted balloon is included by developing the relation between flow resistance and occlusion ratio with the neural network approach. Finally, the accuracy of the developed 1D composite model for REBOA operations, which can be solved analytically in the frequency domain, is verified by comparing to computational fluid dynamics (CFD) simulations. It is demonstrated that the 1D model is able to reproduce main features of the systemic circulation under balloon occlusion of the aorta during REBOA surgery. The 1D composite model could substantially reduce the computational time, which makes it possible to give the instant prediction of the working parameters during RABOA operations.
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Oclusão com Balão , Procedimentos Endovasculares , Humanos , Ressuscitação/métodos , Hemodinâmica/fisiologia , Hemorragia , Aorta/cirurgia , Fluxo Pulsátil , Oclusão com Balão/métodos , Procedimentos Endovasculares/métodosRESUMO
It is critical to design the solvents or additives to provide high oxidation stability of electrolyte and good solid-electrolyte interphase (SEI) in lithium secondary batteries. In this work, we used quantum chemical calculations to evaluate carbonates with various fluorinated patterns to satisfy the requirements of antioxidation, stabilize SEI films, and modify solvation structures. The thermodynamic cycle method was used to calculate the oxidation and reduction potentials of a series of fluorinated linear (dimethyl carbonate, diethyl carbonate, and methyl ethyl carbonate) and cyclic carbonates (ethylene carbonate, propylene carbonate, and 2,3-butanediol cyclic carbonate) vs Li+/Li. Both quantity and position of fluorine substitutions have a significant impact on the oxidation and reduction potentials according to correlation analyses. The instinctive causes for the potential change were the influence of the fluorinated position on the frontier orbital. We further studied lithium-ion coordinated fluorinated carbonates and found that the binding energy is mostly determined by electrostatic interaction according to the energy decomposition analysis. Fluorination will weaken the coordination ability of carbonates, which is demonstrated by their electrostatic potential distributions. Furthermore, it was found that the linear carbonate fluorinated at the α-position under reduction reaction easily produces LiF in situ, which was beneficial to the construction of good SEI. Finally, we provide some suggestions for the development of fluorinated carbonates based on the theoretical studies in this work.
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We propose a classical density functional theory model to study the self-assembly of polymeric surfactants on curved surfaces. We use this model to investigate the thermodynamics of phase separation of a binary mixture of size asymmetric miscible surfactants on cylindrical and spherical surfaces, and observe that phase separation driven by size alone is thermodynamically unfavorable on both cylindrical and spherical surfaces. We use the theory, supplemented by dissipative particle dynamics (DPD) simulations, to predict pattern formation on a non-uniform surface with regions of positive and negative curvature. Our results suggest potential ways to couple surface topography and polymeric surfactants to design surfaces coated with non-uniform patterns.
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Micro-nanobubbles (MNBs) technology has emerged as an effective means of sewage treatment, while the molecular mechanism for its pollutant degradation is still unknown. In this paper, the reactive molecular dynamics simulation technique is used to study the degradation mechanism of pollutants caused by shock-induced nanobubble collapse. We first demonstrate that the propagating shock wave can induce nanobubble collapse, and the collapsing nanobubble has the ability to focus mechanical energy via the converging motion of liquid in the interior of the bubble, leading to the formation of a high-speed jet with a much higher energy density. We also unveil the mechanical nature of long-chain pollutant degradation and the mechanism of free radical generation. Due to the impacting jet, the high-gradient flow has the ability to stretch the long-chain molecule and cause mechanical scission of the molecule in a homolytic manner. Finally, our simulation results reveal that adding ozone molecules to the collapsing bubble would introduce an additional dehydrogenation mechanism.
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Ethanol has great effects on the adsorption of phthalate acid esters (PAEs) on activated carbon (AC), which are usually overlooked and hardly studied. This study investigated the overlooked effects of ethanol on the adsorption of PAEs in alcoholic solutions. The adsorption capacities of dibutyl phthalate (DBP) on AC in solutions with ethanol contents of 30, 50, 70, and 100 v% were only 59%, 43%, 19%, and 10% of that (16.39 mg/g) in water, respectively. The ethanol content increase from 50 v% to 100 v% worsened the adsorption performances significantly with the formation of water-ethanol-DBP clusters (decreasing from 13.99 mg/g to 2.34 mg/g). The molecular dynamics simulation showed that the DBP tended to be distributed farther away from the AC when the ethanol content increased from 0 v% to 100 v% (the average distribution distance increased from 5.25 Å to 15.3 Å). The PAEs with shorter chains were more affected by the presence of ethanol than those with longer chains. Taking DBP as an example, the adsorption capacity of AC in ethanol (0.41 mg/g) is only 2.2% of that in water (18.21 mg/g). The application results in actual Baijiu samples showed that the adsorption of PAEs on AC had important effects on the Baijiu flavors.
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In the nanoscale regime, flow behaviors for liquids show qualitative deviations from bulk expectations. In this work, we reveal by molecular dynamics simulations that plug flow down to nanoscale induces molecular friction that leads to a new flow structure due to the molecular clogging of the encaged liquid. This plug-like nanoscale liquid flow shows several features differ from the macroscopic plug flow and Poiseuille flow: It leads to enhanced liquid/solid friction, producing a friction of several order of magnitude larger than that of Couette flow; the friction enhancement is sensitively dependent of the liquid column length and the wettability of the solid substrates; it leads to the local compaction of liquid molecules that may induce solidification phenomenon for a long liquid column.
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Simulação de Dinâmica Molecular , FricçãoRESUMO
Heterogeneous bubble nucleation is one of the most fundamental interfacial processes ranging from nature to technology. There is excellent evidence that surface topology is important in directing heterogeneous nucleation; however, deep understanding of the energetics by which nanoscale architectures promote nucleation is still challenging. Herein, we report a direct and quantitative measurement of single-bubble nucleation on a single silica nanoparticle within a microsized droplet using scanning electrochemical cell microscopy. Local gas concentration at nucleation is determined from finite element simulation at the corresponding faradaic current of the peak-featured voltammogram. It is demonstrated that the criteria gas concentration for nucleation first drops and then rises with increasing nanoparticle radius. An optimum nanoparticle radius around 10 nm prominently expedites the nucleation by facilitating the special topological nanoconfinements that consequently catalyze the nucleation. Moreover, the experimental result is corroborated by our theoretical calculations of free energy change based on the classic nucleation theory. This study offers insights into the impact of surface topology on heterogenous nucleation that have not been previously observed.
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Gas-liquid transition is generally a complex process, which involves nucleation of droplets and their growth by evaporation-condensation or collision-coalescence processes. Here, we focus on a microscopic system in which there is only one liquid droplet at most. In this case, we can develop an equilibrium theory for the formation of the droplet in the gas phase using the classical nucleation theory. We use the van der Waals fluid model with surface tension and calculate the size fluctuation of the droplet for various confinement conditions, NVT (in which the volume V of the system is fixed), NPT (in which the pressure P of the system is fixed), and NBT (in which the system is confined in a nano-bubble immersed in a host liquid, where both V and P can fluctuate). We show that in the NBT system, the size flexibility along with space confinement induces a wealth of properties that are not found in NVT and NPT. It exhibits richer phase behaviors: a stable droplet appears and coexists with the pure gas phase and/or pure liquid phase. When compared to the NVT system, the NBT system shows not only the oscillatory fluctuation between the two stable states but also a large fluctuation in the total volume and the pressure.
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Artificially added or undesired organic and inorganic contaminants in solution that are interfacially active always tend to be adsorbed at the gas-liquid interface of micro- and nano-bubbles, affecting the stability of the tiny bubbles. In this work, by using molecular dynamics simulations we study how the adsorbed surfactant-like molecules, with their amphiphilic character, affect the dissolution of the existing bulk nanobubbles under low gas supersaturation environments. We find that, depending on the concentration of the dissolved gas and the molecular structure of surfactants, two fates of bulk nanobubbles whose interfaces are saturated by surfactants are found: either remaining stable or being completely dissolved. With gas dissolution, the bubble shrinks and the insoluble surfactants form a monolayer with an increasing areal density until an extremely low (close to 0) surface tension is reached. In the limit of vanishing surface tension, the chemical structure of surfactants crucially affects the bubble stability by changing the monolayer elastic energy. Two basic conditions for stable nanobubbles at low gas saturation are identified: vanishing surface tension due to bubble dissolution and positive spontaneous curvature of the surfactant monolayer. Based on this observation, we discuss the similarity in the stability mechanism of bulk nanobubbles and that of microemulsions.
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Gas bubbles are ubiquitous in electrochemical processes, particularly in water electrolysis. Due to the development of gas-evolving electrocatalysis and energy conversion technology, a deep understanding of gas bubble behaviors at the electrode surface is highly desirable. In this work, by combining theoretical analysis and molecular simulations, we study the behaviors of a single nanobubble electrogenerated at a nanoelectrode. With the dynamic equilibrium model, the stability criteria for stationary surface nanobubbles are established. We show theoretically that a slight change in either the gas solubility or solute concentration results in various nanobubble dynamic states at a nanoelectrode: contact line pinning in aqueous and ethylene glycol solutions, oscillation of pinning states in dimethyl sulfoxide, and mobile nanobubbles in methanol. The above complex nanobubble behavior at the electrode/electrolyte interface is explained by the competition between gas influx into the nanobubble and outflux from the nanobubble.
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We respond to the comments raised by Rusanov et al. on the breakdown of contact angle match between small sized bubbles and droplets, as set out in our paper (Nanoscale, 2019, 11, 2823.). In this Reply, we clarify the rationale behind our conclusions and point out that Rusanov et al. failed to consider the difference between bubbles and droplets in their derivation.
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Analogous to other porous solids, pinned nanobubbles serve as a zero-dimensional stable nanoscale chamber with controllable thermodynamic parameters, whereas they can respond to state change of guest molecule. Here we analyzed peculiarities of phase transitions in pinned nanobubbles, which were experimentally proved to be superstable. By combining molecular dynamics simulation and thermodynamic analysis, we reveal that guest molecules encapsulated inside a nanobubble exhibit distinct state behaviors: a state in vapor phase, a reversible two-state oscillation, and a stable nanodroplet@nanobubble state, depending on the number of guest molecules and the external pressure. The free-energy landscape shows how state metastability gradually develops with external stimuli and leads to the specific bistable state of two-state oscillation. The existence of strong coupling between nanobubble breathing and two-state oscillation is identified. Our simulation results demonstrate that the flexibility of pinned nanobubbles plays at least the same important role as space confinement in determining the states of guest molecules. Our findings indicate that pinned nanobubbles, serving as soft porous media that possess high stability and reversible transformability, show a wealth of properties that are not found in bulk solutions and in porous solids.
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Cationic agents, such as ionic liquids (ILs)-based species, have broad-spectrum antibacterial activities. However, the antibacterial mechanisms lack systematic and molecular-level research, especially for Gram-negative bacteria, which have highly organized membrane structures. Here, we designed a series of flexible fluorescent diketopyrrolopyrrole-based ionic liquid derivatives (ILDs) with various molecular sizes (1.95-4.2 nm). The structure-antibacterial activity relationships of the ILDs against Escherichia coli (E. coli) were systematically studied thorough antibacterial tests, fluorescent tracing, morphology analysis, molecular biology, and molecular dynamics (MD) simulations. ILD-6, with a relatively small molecular size, could penetrate through the bacterial membrane, leading to membrane thinning and intracellular activities. ILD-6 showed fast and efficient antimicrobial activity. With the increase of molecular sizes, the corresponding ILDs were proven to intercalate into the bacterial membrane, leading to the destabilization of the lipid bilayer and further contributing to the antimicrobial activities. Moreover, the antibacterial activity of ILD-8 was limited, where the size was not large enough to introduce significant membrane disorder. Relative antibacterial experiments using another common Gram-negative bacteria, Pseudomonas aeruginosa (PAO1), further confirmed the proposed structure-antibacterial activity relationships of ILDs. More impressively, both ILD-6 and ILD-12 displayed significant in vivo therapeutic effects on the PAO1-infected rat model, while ILD-8 performed poorly, which confirmed the antibacterial mechanism of ILDs and proved their potentials for future application. This work clarifies the interactions between molecular sizes of ionic liquid-based species and Gram-negative bacteria and will provide useful guidance for the rational design of high-performance antibacterial agents.