A hydrated crystalline calcium carbonate phase: Calcium carbonate hemihydrate.

As one of the most abundant materials in the world, calcium carbonate, CaCO3, is the main constituent of the skeletons and shells of various marine organisms. It is used in the cement industry and plays a crucial role in the global carbon cycle and formation of sedimentary rocks. For more than a century, only three polymorphs of pure CaCO3-calcite, aragonite, and vaterite-were known to exist at ambient conditions, as well as two hydrated crystal phases, monohydrocalcite (CaCO3·1H2O) and ikaite (CaCO3·6H2O). While investigating the role of magnesium ions in crystallization pathways of amorphous calcium carbonate, we unexpectedly discovered an unknown crystalline phase, hemihydrate CaCO3·½H2O, with monoclinic structure. This discovery may have important implications in biomineralization, geology, and industrial processes based on hydration of CaCO3.

Morphological and textural evolution of the prismatic ultrastructure in mollusc shells: A comparative study of Pinnidae species.

Molluscan shells, exhibiting a variety of complex three-dimensional architectures, are an exemplar model system to study biogenic mineral formation by living organisms. Recent studies have demonstrated that the deposition process of some shell ultrastructures can be described using classical analytical models borrowed from materials physics, which were developed to predict the structural evolution of man-made and geological polycrystalline composite assemblies. In the current study, we use this newly developed capacity to quantitatively describe the morphogenesis of the prismatic ultrastructure in three shells from the bivalve family Pinnidae towards establishing a correlation between structure, texture, growth kinetics, topology and phylogeny of the species. Using data collected by electron microscopy, synchrotron-based microtomography, electron backscatter diffraction analysis (EBSD) and X-ray diffraction we demonstrate that the prismatic ultrastructures in Pinnidae are formed following either ideal or triple-junction-controlled kinetics, which are shown to be closely linked to the morphological and topological characteristics, as well as crystallographic texture of these biocomposites. The experimental and analytical framework presented in this comparative study can serve as an additional tool for classifying molluscan shell ultrastructures on the levels of structural and textural morphogenesis. STATEMENT OF SIGNIFICANCE: The ability to quantitatively describe the structural evolution of the prismatic architecture in mollusc shells is used for the first time to derive and compare between analytical parameters that define the growth kinetics and morphological and topological evolution during the growth of three shells from the family Pinnidae from two different genera. Furthermore, these parameters are linked to the evolution of crystallographic texture in the studied architectures. The developed experimental and analytical framework not only enables us to quantitatively describe species-specific growth mechanisms but also suggests a direct correlation between the evolution of morphology and texture.

Shaping highly regular glass architectures: A lesson from nature.

Demospongiae is a class of marine sponges that mineralize skeletal elements, the glass spicules, made of amorphous silica. The spicules exhibit a diversity of highly regular three-dimensional branched morphologies that are a paradigm example of symmetry in biological systems. Current glass shaping technology requires treatment at high temperatures. In this context, the mechanism by which glass architectures are formed by living organisms remains a mystery. We uncover the principles of spicule morphogenesis. During spicule formation, the process of silica deposition is templated by an organic filament. It is composed of enzymatically active proteins arranged in a mesoscopic hexagonal crystal-like structure. In analogy to synthetic inorganic nanocrystals that show high spatial regularity, we demonstrate that the branching of the filament follows specific crystallographic directions of the protein lattice. In correlation with the symmetry of the lattice, filament branching determines the highly regular morphology of the spicules on the macroscale.

Ordering of protein and water molecules at their interfaces with chitin nano-crystals.

Synchrotron X-ray diffraction was applied to study the structure of biogenic α-chitin crystals composing the tendon of the spider Cupiennius salei. Measurements were carried out on pristine chitin crystals stabilized by proteins and water, as well as after their deproteinization and dehydration. We found substantial shifts (up to Δq/q=9% in the wave vector in q-space) in the (020) diffraction peak position between intact and purified chitin samples. However, chitin lattice parameters extracted from the set of reflections (hkl), which did not contain the (020)-reflection, showed no systematic variation between the pristine and the processed samples. The observed shifts in the (020) peak position are discussed in terms of the ordering-induced modulation of the protein and water electron density near the surface of the ultra-thin chitin fibrils due to strong protein/chitin and water/chitin interactions. The extracted modulation periods can be used as a quantitative parameter characterizing the interaction length.

Eshelby Twist as a Possible Source of Lattice Rotation in a Perfectly Ordered Protein/Silica Structure Grown by a Simple Organism.

The formation mechanism of a perfectly ordered protein/silica structure in the axial filament of the anchor spicule of the silica sponge Monorhaphis chuni is suggested. Experimental evidence shows that the growth of this architecture is realized by a thermodynamically driven dislocation-mediated spiral growth mechanism, resulting in a specific rotation of the mesoscopic crystal lattice (Eshelby twist).

In situ compressibility of carbonated hydroxyapatite in tooth dentine measured under hydrostatic pressure by high energy X-ray diffraction.

Tooth dentine and other bone-like materials contain carbonated hydroxyapatite nanoparticles within a network of collagen fibrils. It is widely assumed that the elastic properties of biogenic hydroxyapatites are identical to those of geological apatite. By applying hydrostatic pressure and by in situ measurements of the a- and c- lattice parameters using high energy X-ray diffraction, we characterize the anisotropic deformability of the mineral in the crowns and roots of teeth. The collected data allowed us to calculate the bulk modulus and to derive precise estimates of Young׳s moduli and Poisson׳s ratios of the biogenic mineral particles. The results show that the dentine apatite particles are about 20% less stiff than geological and synthetic apatites and that the mineral has an average bulk modulus K=82.7 GPa. A 5% anisotropy is observed in the derived values of Young׳s moduli, with E11≈91 GPa and E33≈96 GPa, indicating that the nanoparticles are only slightly stiffer along their long axis. Poisson׳s ratio spans ν≈0.30-0.35, as expected. Our findings suggest that the carbonated nanoparticles of biogenic apatite are significantly softer than previously thought and that their elastic properties can be considered to be nearly isotropic.

Compressive Residual Strains in Mineral Nanoparticles as a Possible Origin of Enhanced Crack Resistance in Human Tooth Dentin.

The tough bulk of dentin in teeth supports enamel, creating cutting and grinding biostructures with superior failure resistance that is not fully understood. Synchrotron-based diffraction methods, utilizing micro- and nanofocused X-ray beams, reveal that the nm-sized mineral particles aligned with collagen are precompressed and that the residual strains vanish upon mild annealing. We show the link between the mineral nanoparticles and known damage propagation trajectories in dentin, suggesting a previously overlooked compression-mediated toughening mechanism.

Nanocrystalline calcitic lens arrays fabricated by self-assembly followed by amorphous-to-crystalline phase transformation.

Natural calcium carbonate-based nanocomposites often have superior physical properties and provide a comprehensive source for bioinspired synthetic materials. Here we present thermodynamically stable, transparent CaCO3 microlens arrays (MLA) produced by transforming an amorphous CaCO3 phase into nanocrystalline calcite. We analyze the structure and properties of crystallized MLA by X-ray scattering, transmitted and polarized light microscopy, and electron microscopy and find that MLA are crystallized in spherulite-like patterns without changing the shape of the microlens. The key finding is that nanocrystallinity of the calcite formed diminishes structural anisotropy on the wavelength scale and results in greatly reduced birefringent effects. The remnant preferred orientation of the optical axes of calcite crystals in the plane of the microlens arrays leads to some directionality of optical properties, which may be beneficial for technical applications.

A perfectly periodic three-dimensional protein/silica mesoporous structure produced by an organism.

The discovery of perfectly ordered 3D mesoporous protein/silica structure in the axial filament of the marine sponge Monorhaphis chuni is reported. The structure belongs to body-centered tetragonal symmetry system (a=9.88 nm, c=10.83 nm) and comprises interconnecting lattices of protein and silica, templated by the self-assembled, enzymatically active protein-silicatein, whose primary function is the precipitation of silica.

Atomic structure and ultrastructure of the Murex troscheli shell.

The structure of the gastropod Murex troscheli shell was investigated by using high-resolution scanning and transmission electron microscopies and high-resolution synchrotron X-ray powder diffraction. Rietveld refinement of X-ray diffraction patterns revealed anisotropic distortions of the orthorhombic aragonite unit cell, reaching a maximum of about 0.2% (along the c-direction) with respect to geological aragonite. Lattice distortions are effectively relieved under mild annealing at temperatures between 150 °C and 250 °C. This relaxation correlated well with the loss of organic substance during annealing, measured by thermal gravimetric analysis. The shell ultrastructure consists of three orders of hierarchy, which is typical for crossed-lamellar layers. The third-order fiber-like lamellae, nearly 50 × 250 nm² in cross-section, are heavily twinned, producing specific contrast features in transmission electron microscopy micrographs. So, higher orders of hierarchy are, in fact, twins, which boundaries are free of organic matter.

Anisotropic lattice distortions in biogenic calcite induced by intra-crystalline organic molecules.

We have performed precise structural measurements on five different calcitic seashells by high-resolution X-ray powder diffraction on a synchrotron beam line and by laboratory single crystal X-ray diffraction. The unit cell parameters a and c of biogenic calcite were found to be systematically larger than those measured in the non-biogenic calcite. The maximum lattice distortion (about 2.10(-3)) was detected along the c-axis. Under heat treatment above 200 degrees C, a pronounced lattice relaxation was observed, which allowed us to conclude that anisotropic lattice swelling in biogenic calcite is induced by organic macromolecules incorporated within the single crystal calcitic prisms during biomineralization. This conclusion is supported by the results of crystallization experiments in the presence of specific protein extracted from one of the shells.

Purification and functional analysis of a 40 kD protein extracted from the Strombus decorus persicus mollusk shells.

A 40 kD protein has been extracted from the biomineral matrix of the calcium carbonate gastropod shell of Strombus decorus persicus. The protein was isolated by decalcification and ion exchange HPLC. We have named this protein ACLS40, i.e., aragonite crossed-lamellar structure protein. A partial sequence of the isolated ACLS40 and amino acid analysis both indicate that it does not belong to the family of very acidic proteins, i.e., rich in aspartic and glutamic residues. The shell-extracted protein shows the ability to stabilize calcium carbonate in vitro, in the form of thermodynamically unstable vaterite polymorph, and to inhibit the growth of calcite.

Anisotropic lattice distortions in the mollusk-made aragonite: a widespread phenomenon.

In this paper, we present experimental results demonstrating systematic structural distinctions between biogenic and non-biogenic calcium carbonate. Specifically we show, by high-resolution X-ray powder diffraction on dedicated synchrotron beam lines, that the orthorhombic unit cell of the mollusk-made aragonite is anisotropically distorted as compared with that one of geological aragonite. In all investigated shells, belonging to different classes (bivalve, gastropod, and cephalopod) and taken from different habitat origins (sea, fresh water, and land), the maximum elongation of about 0.1-0.2% was found along the c-axis. The lattice distortions along the a-axis were also of the positive sign (elongation) but lower than those along the c-axis, whereas lattice distortions along the b-axis were always negative (contraction). Supporting experiments, including structural analysis after a bleach procedure, measurements of temperature-dependent lattice relaxation, measurements of the CO(2) release at elevated temperatures, signify that the observed structural distinctions are most probably caused by the organic molecules intercalating into the aragonite lattice during biomineralization. Our findings show that in some sense organisms control the atomic structure of the crystals. Deeper understanding of this phenomenon will aid in the development of new approaches to grow biomimetic composites and tailor their properties on a molecular level.

Light-induced symmetry breaking and related giant enhancement of nonlinear properties in CdZnTe:V crystals.

We report on enormous light-induced reversible strain effects in CdZnTe:V crystals, which lead to a remarkable enhancement of their nonlinear properties, such as electrostriction and electro-optic effects. Using both high resolution x-ray diffraction and optical interferometry we measure light-induced relative deformation of the initial crystalline lattice (changes in d-spacings) up to 0.15%. The experimental findings are attributed to light-induced breaking of the initial cubic crystalline symmetry. Our results point to a family of inorganic materials whose nonlinear properties can be remarkably enhanced by light, offering new possibilities for nonlinear frequency conversion, generation of Terahertz radiation, electro-optic modulation, and self-deflection of optical beams.

Aragonite growth on single-crystal substrates displaying a threefold axis.

Aragonite was grown epitaxially under calcite-stable conditions by using carbonate free single-crystal substrates with a threefold axis oriented normal to the surface.

Anisotropic lattice distortions in biogenic aragonite.

Composite biogenic materials produced by organisms have a complicated design on a nanometre scale. An outstanding example of organic-inorganic composites is provided by mollusc seashells, whose superior mechanical properties are due to their multi-level crystalline hierarchy and the presence of a small amount (0.1-5 wt%) of organic molecules. The presence of organic molecules, among other characteristics, can influence the coherence length for X-ray scattering in biogenic crystals. Here we show the results of synchrotron high-resolution X-ray powder diffraction measurements in biogenic and non-biogenic (geological) aragonite crystals. On applying the Rietveld refinement procedure to the high-resolution diffraction spectra, we were able to extract the aragonite lattice parameters with an accuracy of 10 p.p.m. As a result, we found anisotropic lattice distortions in biogenic aragonite relative to the geological sample, maximum distortion being 0.1% along the c axis of the orthorhombic unit cell. The organic molecules could be a source of these structural distortions in biogenic crystals. This finding may be important to the general understanding of the biomineralization process and the development of bio-inspired 'smart' materials.