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1.
J Biomol Struct Dyn ; : 1-12, 2024 Oct 28.
Artigo em Inglês | MEDLINE | ID: mdl-39466135

RESUMO

Ribosome Inactivating Proteins (RIPs) act by irreversibly depurinating the 28S rRNA ricin-sarcin loop (SRL) of the eukaryotic ribosome resulting in protein synthesis inhibition. In general, they consist of two variants: Type I which is single chained (∼30 kDa), and Type II, a more toxic variant which is a Type I N-glycosidase chain covalently linked to a lectin chain. These proteins are believed to play a pivotal role in defence mechanisms. Intriguingly, non-toxic variants of such toxic proteins do exist in nature. To explore their mode of action, in the present study we have selected three toxic (Ricin, Ebulin and HmRIP) as well as two non-toxic (BGSL and SGSL) RIPs and performed molecular docking and molecular dynamic simulations with the SRL loop. This study throws light on the structural stability and plasticity of the toxic and non-toxic RIP complexes. Furthermore, analysis of the active site cavity volume and binding free energy calculations reveal that the SRL, particularly the specific adenine (A4605), is relatively unstable in the case of non-toxic RIPs which is also supported by the free binding energy calculations, and the pocket size analysis indicates the abnormal increase in active site cavity volume of non-toxic RIPs with time. This first-of-its-kind comprehensive study of toxic and non-toxic RIPs gives insights about the mode of action and the dynamic nature of their interaction with the SRL loop. These observations will be helpful in the development of toxoids against RIPs and also in designing novel therapeutic approaches against human diseases.

2.
Zookeys ; 1215: 1-26, 2024.
Artigo em Inglês | MEDLINE | ID: mdl-39430047

RESUMO

Labronema Thorne, 1939 is a large and diverse dorylaimid genus with complicated taxonomy. Two new species, Labronemaporosum sp. nov. and Labronemabidoupense sp. nov. from natural habitats in Vietnam were characterised both morphologically and molecularly (18S rDNA and 28 rDNA), and line drawings and microphotographs are provided. Phylogenetic analyses showed that the new species clustered together with Labronemaferox Thorne, 1939, the type species of the genus. The two new taxa belong to a group of Labronema species with medium body (L = 1.5-2.5 mm) and odontostyle (31-39 µm) length, and a lip region offset by a constriction. Based on morphological and molecular evidence, this study shows that the populations from Vietnam previously identified as L.glandosum Rahman, Jairajpuri, Ahmad & Ahmad, 1986 in fact represent L.porosum sp. nov. Evolutionary relationships of Labronema species are discussed. A key to the species of Labronema with a medium-sized odontostyle (31-39 µm) is provided as well as a list of the species of the genus considered valid.

3.
J Helminthol ; 98: e55, 2024 Oct 28.
Artigo em Inglês | MEDLINE | ID: mdl-39463354

RESUMO

Two new species of the genus Allocreadium were isolated from the intestines of the Lake minnow Rhynchocypris percnura caught in the backwater of the Komissarovka River in the South of the Russian Far East. The morphology of A. anastasii n. sp. corresponds to that of Allocreadium sp. from Lake Khar (Mongolia) and Allocreadium sp. Belous, 1952 from the Primorsky region of Russia except for the preacetabular anterior border of the vitelline follicles in A. anastasii n. sp. from the Komissarovka River vs. at anterior half of ventral sucker in Allocreadium sp. Genetic analysis revealed the identity of A. anastasii n. sp. to Allocreadium sp. 1 from the Nezhinka River and Lake Khar. Allocreadium macrolecithum n. sp. was differentiated from Palaearctic Allocreadium spp. by having the following features: respectively large vitelline follicles extending from posterior extremity to anterior margin of the ventral sucker; relatively short caeca reaching the border of middle and posterior thirds of hindbody; and small testes in the middle of hindbody. Interspecific genetic p-distances between Allocreadium spp. were 0.16-7.23% in 28S gene and 18.62-31.54% in Cox1 mtDNA gene. In the phylogenetic tree reconstructed with Maximum parsimony and Bayesian Inference methods, A. anastasii n. sp. and A. macrolecithum n. sp. were nested into different species groups of the genus Allocreadium - sister to A. khankaiense and A. bursense, respectively. Modified dichotomous keys were prepared for 31 Palaearctic species of Allocreadium including A. crassum, A. dogieli, A. papilligerum, A. bursense, A. anastasii n. sp., and A. macrolecithum n. sp.


Assuntos
Doenças dos Peixes , Filogenia , Trematódeos , Infecções por Trematódeos , Animais , Trematódeos/classificação , Trematódeos/genética , Trematódeos/anatomia & histologia , Trematódeos/isolamento & purificação , Doenças dos Peixes/parasitologia , Infecções por Trematódeos/parasitologia , Infecções por Trematódeos/veterinária , Federação Russa , Cyprinidae/parasitologia , Intestinos/parasitologia , RNA Ribossômico 28S/genética , DNA de Helmintos/genética , Rios/parasitologia , Lagos/parasitologia
4.
MycoKeys ; 109: 131-169, 2024.
Artigo em Inglês | MEDLINE | ID: mdl-39398289

RESUMO

A study of corticioid fungi collections from Costa Rica, Panama, Colombia, and Ecuador has resulted in the identification of 26 morphospecies of Lyomyces. These distinctions were made based on characters such as basidiospore size and shape, cystidia morphology, basidioma texture, and hymenial surface configuration. Sequences of rDNA ITS were obtained for 12 of these species, and their relationships to previously known taxa were illustrated using Bayesian and Maximum Likelihood reconstructions of the phylogeny. Protologues are given for 10 new species of Lyomyces: L.boquetensis (found in Panama, belonging to L.sambuci group), L.granulosus (from Costa Rica and Panama, related to L.fimbriatus), L.napoensis (from Ecuador, related to L.elaeidicola), L.neocrustosus (from Panama, L.crustosus group), L.oleifer (from Ecuador, L.crustosus group), L.pantropicus (from Panama and Ecuador, related to L.microfasciculatus), L.orarius (from Ecuador, L.sambuci group), L.parvus (from Costa Rica and Ecuador, L.crustosus group), L.sceptrifer (from Ecuador, related to L.gatesiae), and L.subcylindricus (from Panama, L.crustosus group). Macro- and micro-morphology illustrations are provided for these new species. Additionally, the range of L.organensis is extended to Ecuador. Scanning electron microscopy of crystalline deposits in basidiomata has shown the differences in crystal size and aggregation manner between species.

5.
Front Cell Infect Microbiol ; 14: 1474229, 2024.
Artigo em Inglês | MEDLINE | ID: mdl-39435184

RESUMO

Introduction: Plasmodium falciparum is the most damaging malaria pathogen and brings a heavy burden to global health. Host switching and morphological changes in P. falciparum are dependent on an effective gene expression regulatory system. C5 methylation of cytosines is a common RNA modification in eukaryotes, and the NSUN family are essential m5C modification executors. Currently, little is known about this family in Plasmodium spp. In this study, we focus on exploring the function of PfNSUN1 protein. Methods: An efficient CRISPR/Cas9 gene editing technique was applied to construct the PfNSUN1 knockdown strain. The knockdown efficiency was confirmed by growth curves and western blot experiments. The knockdown transcriptome data was acquired to find differentially expressed genes, and target genes of PfNSUN1 protein were identified by RNA immunoprecipitation and high-throughput sequencing experiments. Results: The efficiency of PfNSUN1 protein down-regulated was about 34%. RNA-seq data revealed that differentially expressed genes were mainly down-regulated. And there were 224, 278, 556 genes that were down-regulated with more than 2-fold changes and p-adj<0.05 at ring, trophozoite and schizont stages, respectively. PfNSUN1 protein was significantly enriched on 154 target genes, including 28S ribosomal RNA and pfap2-g5 transcription factor. Discussion: PfNSUN1 is a crucial RNA post-transcriptional modification protein in P. falciparum. It plays a pivotal role in regulating gene expression and parasite growth by targeting 28S ribosomal RNA and pfap2-g5 transcription factor.


Assuntos
Eritrócitos , Malária Falciparum , Plasmodium falciparum , Proteínas de Protozoários , Plasmodium falciparum/genética , Plasmodium falciparum/crescimento & desenvolvimento , Humanos , Eritrócitos/parasitologia , Proteínas de Protozoários/genética , Proteínas de Protozoários/metabolismo , Malária Falciparum/parasitologia , Metiltransferases/genética , Metiltransferases/metabolismo , Regulação da Expressão Gênica , Sistemas CRISPR-Cas , Técnicas de Silenciamento de Genes , Perfilação da Expressão Gênica , Transcriptoma , Edição de Genes , Metilação
6.
Zookeys ; 1213: 237-249, 2024.
Artigo em Inglês | MEDLINE | ID: mdl-39372278

RESUMO

Members of the genus Pseudopterogorgia Kükenthal, 1919 are widely distributed in shallow water of the Indo-West Pacific. During an investigation of benthic biodiversity in the subtidal zone surrounding the Nanji Islands in the East China Sea, two specimens of Pseudopterogorgia were collected and described as a new species based on an integrated morphological-molecular approach. Pseudopterogorgiananjiensis sp. nov. is most similar to P.fredericki Williams & Vennam, 2001 in the irregular branching form and indistinct scaphoids, but differs by the coenenchymal sclerite content of distinct capstans and a few warty spindles and radiates (vs. mostly warty spindles and a few capstans), and a purplish colony (vs. white, pink to deep rose). Molecular phylogenetic analyses, based on the mtMutS-COI gene sequences, delineated a monophyletic clade encompassing all assessed Pseudopterogorgia species. Within this clade, P.nanjiensis sp. nov. showed a close phylogenetic affinity with both P.fredericki and P.australiensis Ridley, 1884.

7.
Vet Parasitol Reg Stud Reports ; 54: 101085, 2024 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-39237229

RESUMO

Piaractus brachypomus (Pacú) is the main native fish species cultivated in Peru and holds great potential for growth in aquaculture from the Peruvian Amazon. Between October 2021 and January 2022 in two fish producing farms in the Amazon region of San Martín in Peru, P. brachypomus individuals were examined for parasite evaluation. A total of 6366 monogeneans were isolated from the gills of 30 fish, revealing a prevalence of 100%, with an abundance and mean intensity of 212 parasites per fish. Monogeneans were morphologically identified as Mymarothecium viatorum and Anacanthorus penilabiatus. The genetic divergence in the 28S rDNA gene found among A. penilabiatus sequences was 0.1% and among Anacanthorus spp. it ranged from 0.9% to 7.5%. The genetic divergence found among the M. viatorum sequences was 0.3%. These finding represents the first molecular data of M. viatorum and A. penilabiatus in Peru using the 28S rDNA gene of these monogeneans. The new sequences obtained will contribute to future studies on the phylogenetic relationships among dactylogyrids. However, further research with a broader range of host-parasite samples and additional genetic markers is needed to clarify these relationships and provide stronger support for the phylogenetic positions.


Assuntos
Aquicultura , Doenças dos Peixes , Infecções por Trematódeos , Animais , Peru/epidemiologia , Doenças dos Peixes/parasitologia , Doenças dos Peixes/epidemiologia , Infecções por Trematódeos/veterinária , Infecções por Trematódeos/parasitologia , Infecções por Trematódeos/epidemiologia , Brânquias/parasitologia , Filogenia , Trematódeos/classificação , Trematódeos/genética , Trematódeos/isolamento & purificação , RNA Ribossômico 28S/genética , RNA Ribossômico 28S/análise , Prevalência , Pesqueiros , DNA Ribossômico/análise , DNA Ribossômico/genética
8.
Sci Rep ; 14(1): 22085, 2024 09 27.
Artigo em Inglês | MEDLINE | ID: mdl-39333174

RESUMO

Rhopalocercous Cercaria duplicata von Baer, 1827 develops in an intermediate host, the unionid bivalve Anodonta anatina (L.), but its adult form has been unknown. We examined eight fish species occurring in the presence of a highly infested population of A. anatina in the Zeslawice reservoir (S Poland). Gravid Phyllodistomum specimens were obtained from the ureters of ide, Leuciscus idus (L.) and common rudd, Scardinius erythrophthalmus (L.). One of the rudd specimens was doubly infected, a trematode was also found in the urinary bladder. In addition, a gravid Phyllodistomum specimen was found in the ureter of a tench Tinca tinca (L.), caught in Lake Ilmedas (Lithuania). In order to clarify the phylogenetic position of larval and adult gorgoderids and to establish their life cycle, ITS2 and 28S rDNA sequences were analysed. The analysis showed that adult Phyllodistomum specimens located in the ureters are conspecific with C. duplicata. The trematode found in the urinary bladder of S. erythrophthalmus was P. folium (Olfers, 1816). It is suggested that adult stages of C. duplicata should be referred to as Phyllodistomum duplicatum n. comb. The intercaecal position of the uterus and the deeply-lobed ovary are the main features distinguishing it from other Phyllodistomum species. Host specificity and ecology are discussed.


Assuntos
Cercárias , Especificidade de Hospedeiro , Filogenia , Trematódeos , Animais , Trematódeos/genética , Trematódeos/anatomia & histologia , Trematódeos/classificação , Cercárias/genética , Cercárias/anatomia & histologia , RNA Ribossômico 28S/genética , Estágios do Ciclo de Vida , Peixes/parasitologia , Infecções por Trematódeos/parasitologia , Infecções por Trematódeos/veterinária , Bivalves/parasitologia
9.
Parasitol Res ; 123(9): 324, 2024 Sep 14.
Artigo em Inglês | MEDLINE | ID: mdl-39276229

RESUMO

Sarcocystis infection in sheep has caused significant economic losses in the livestock industry, and the genetic similarity among Sarcocystis species highlights the need for precise diagnostic methods in sheep. This study developed a loop-mediated isothermal amplification (LAMP) method targeting COX-1 and 28S rRNA genes to detect Sarcocystis tenella and Sarcocystis gigantea, respectively. The LAMP method exhibited high specificity, selectively amplifying target DNA sequences without cross-reactivity with closely related protozoa, such as Toxoplasma gondii and Neospora caninum. Detection limits were determined as 3 × 105 copies/L for S. tenella and 6 × 104 copies/L for S. gigantea, enabling sensitive identification of low-level infections. Comparative analysis with conventional PCR on sheep cardiac tissues demonstrated a higher LAMP detection rate (80.0% vs 66.7%). In conclusion, the LAMP method offers superior sensitivity to conventional PCR, allows visual confirmation of results, and provides a rapid diagnostic tool for identifying S. tenella and S. gigantea infection in sheep. However, due to the limitation of sample availability, we were unable to assess all Sarcocystis species that use sheep as intermediate hosts, which warrants further research.


Assuntos
Técnicas de Diagnóstico Molecular , Técnicas de Amplificação de Ácido Nucleico , Sarcocystis , Sarcocistose , Sensibilidade e Especificidade , Doenças dos Ovinos , Animais , Sarcocystis/genética , Sarcocystis/isolamento & purificação , Sarcocystis/classificação , Ovinos , Sarcocistose/veterinária , Sarcocistose/diagnóstico , Sarcocistose/parasitologia , Doenças dos Ovinos/parasitologia , Doenças dos Ovinos/diagnóstico , Técnicas de Amplificação de Ácido Nucleico/métodos , Técnicas de Amplificação de Ácido Nucleico/veterinária , Técnicas de Diagnóstico Molecular/métodos , RNA Ribossômico 28S/genética , DNA de Protozoário/genética
10.
J Helminthol ; 98: e50, 2024 Sep 18.
Artigo em Inglês | MEDLINE | ID: mdl-39291559

RESUMO

Three fish blood flukes (Aporocotylidae Odhner, 1912) infect mullets (Mugiliformes: Mugilidae): Cardicola mugilis Yamaguti, 1970 and Plethorchis acanthus Martin, 1975 infect striped mullet, Mugil cephalus Linnaeus, 1758 in the Central Pacific Ocean (Hawaiian Islands) and Brisbane River (Australia), respectively; Cardicola brasiliensis Knoff & Amato, 1992 infects Lebranche mullet, Mugil liza Valenciennes, 1836 from the Southwestern Atlantic Ocean (Brazil). White mullets were cast-netted from the mouth of Deer River, a coastal saltmarsh of Mobile Bay, in the north-central Gulf of Mexico and examined for blood fluke infections. Specimens of Mugilitrema labowskiae Warren & Bullard n. gen., n. sp. were found infecting the endocardial surface and inter-trabecular spaces of the atrium, ventricle, and bulbous arteriosus. The new genus and species differ from all other aporocotylids by having the combination of two post-caecal testes, a uterus with straight ascending and descending portions, and a common genital pore. The 28S analysis recovered the new species and P.acanthus as sister taxa and Aporocotylidae as monophyletic. Carditis associated with intense infections comprised endocardial hyperplasia, resulting in a thickened cardiac endothelium. Probable dead or deteriorating eggs in the myocardium were encapsulated by granulomas composed of epithelioid histiocytes. Live eggs infected the afferent artery of gill filaments and were associated with varied hyperplasia of the overlying epithelium and haemorrhaging from the afferent artery in high-intensity infections. The new species is the first aporocotylid infecting a mullet from the northwestern Atlantic Ocean and only the second description of demonstrable endocarditis attributed to an adult fish blood fluke infection.


Assuntos
Doenças dos Peixes , Filogenia , Smegmamorpha , Trematódeos , Infecções por Trematódeos , Animais , Baías , Doenças dos Peixes/parasitologia , Golfo do México , Smegmamorpha/parasitologia , Trematódeos/classificação , Trematódeos/anatomia & histologia , Trematódeos/isolamento & purificação , Infecções por Trematódeos/veterinária , Infecções por Trematódeos/parasitologia
11.
J Nematol ; 56(1): 20240026, 2024 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-39221105

RESUMO

Turfgrass is a crop used extensively in athletic fields and golf courses in Maryland. A soil sample collected in July 2023 from an athletic field in Baltimore County, Maryland, part of a turfgrass nematode survey, contained Belonolaimus longicaudatus. In the southeastern United States, B. longicaudatus is an economically important pathogen of warm season turfgrass. The density was four individuals/100 cm3 of soil, and no visual symptoms were observed in the bermudagrass field. Morphological features and morphometrics of males and females were consistent with B. longicaudatus and placed the Maryland population in a subclade that was geographically represented by populations from north and west Florida, Texas, and South Carolina. Sequencing of the internal transcribed spacer region ITS1 and ITS2 and 28S large ribosomal subunit D2-23 expansion region confirmed the species' identity. Phylogenetic trees and parsimony network analysis placed the Maryland isolate in a large grouping of B. longicaudatus populations including those from Alabama, Delaware, Florida, Indiana, Mississippi, South Carolina, and Texas. To our knowledge, this is the first report of B. longicaudatus in Maryland.

12.
Insects ; 15(9)2024 Aug 29.
Artigo em Inglês | MEDLINE | ID: mdl-39336616

RESUMO

A study was conducted to investigate the evolutionary relationships of Macrotermes subhyalinus from Oman, in the southeastern part of the Arabian Peninsula. Sequences of the mitochondrial COI and the nuclear large-subunit ribosomal RNA (LSU rRNA, 28S) genes were used to investigate the populations of M. subhyalinus across their distribution in Oman to determine their relationships with other Macrotermes species. Our findings indicate that M. subhyalinus in Oman is a member of an East African clade, distinct from those in West Africa. Analyses of the COI showed that there is base composition bias among the taxa (non-stationarity) that has not been considered in earlier studies. We provide the first report of pseudogene copies of 28S in M. subhyalinus that are differentially amplified.

13.
Parasitol Int ; 103: 102953, 2024 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-39181312

RESUMO

A new species of hemiurid trematode found on the gills and in the aorta of the pelagic thresher Alopias pelagicus from the eastern Pacific, off Costa Rica, is described based on an integrative taxonomic approach that includes the use of light and scanning electron microscopy, and 28S rDNA sequencing. Phylogenetic analysis was also performed to explore, for the first time, the relationships of a member of the subfamily Otiotrematinae within the suborder Hemiurata. Paronatrema davidbowiei n. sp. can be distinguished from the congeners by having tegumental spines on the dorsal surface of the forebody, papillae on the oral sucker, and different morphology or number of testicular follicles. BLAST analysis revealed that sequences of Paronatrema davidbowiei n. sp. had the highest degree of similarity with Hirudinella spp. (Hirudinellidae). Results from Maximum Likelihood and Bayesian phylogenetic analyses, returning trees with the exact same topology and strong branch support, distinguished between the two superfamilies included in the suborder Hemiurata: Azygioidea and Hemiuroidea. Our analysis placed the new species in a clade with Copiatestes filiferus, the only existing sequence of the family Syncoeliidae.


Assuntos
Doenças dos Peixes , Microscopia Eletrônica de Varredura , Filogenia , Trematódeos , Infecções por Trematódeos , Animais , Trematódeos/classificação , Trematódeos/genética , Trematódeos/anatomia & histologia , Infecções por Trematódeos/veterinária , Infecções por Trematódeos/parasitologia , Doenças dos Peixes/parasitologia , Microscopia Eletrônica de Varredura/veterinária , RNA Ribossômico 28S/genética , RNA Ribossômico 28S/análise , Costa Rica , Brânquias/parasitologia , DNA Ribossômico/análise , DNA de Helmintos/análise , Perciformes/parasitologia , Teorema de Bayes
14.
J Parasitol ; 110(4): 351-359, 2024 Aug 01.
Artigo em Inglês | MEDLINE | ID: mdl-39106981

RESUMO

HALIOTREMA PTEROISI: Paperna, 1972 (Monogenoidea: Dactylogyridae) was found parasitizing the gill lamellae of devil firefish, Pterois miles (Bennet) (Perciformes: Scorpaenidae), in the Red Sea off Safaga (26°44'N, 33°56'E), Egypt. The parasite species was described based on morphological features of available specimens and transferred to PlatycephalotremaKritsky and Nitta, 2019 (Dactylogyridae) as Platycephalotrema pteroisi (Paperna, 1972) n. comb. The occurrence of Pl. pteroisi off Safaga, Egypt, represented a range extension for the helminth of about 160 km to the southwest of the southern end of the Gulf of Aqaba. The transfer of the species to Platycephalotrema based on an evaluation of morphological features was supported by an analysis of molecular sequences of the 28S rDNA gene of Pl. pteroisi and 49 other dactylogyrid species. Maximum-likelihood, Bayesian inference, and maximum parsimony analyses of this dactylogyrid sequence data revealed H. pteroisi to nest with significant support within the clade of Platycephalotrema spp. During the literature review of dactylogyrid species infecting scorpionfishes, it was determined that Ancyrocephalus sp. of Dyer et al. from luna lion fish Pterois lunulata Temminck and Schlegel collected off Okinawa-jima, Japan represented an undescribed species of Platycephalotrema.


Assuntos
Doenças dos Peixes , Brânquias , Perciformes , Filogenia , Trematódeos , Infecções por Trematódeos , Animais , Doenças dos Peixes/parasitologia , Doenças dos Peixes/epidemiologia , Infecções por Trematódeos/parasitologia , Infecções por Trematódeos/veterinária , Perciformes/parasitologia , Brânquias/parasitologia , Oceano Índico , Trematódeos/classificação , Trematódeos/anatomia & histologia , Trematódeos/genética , Trematódeos/isolamento & purificação , Egito , DNA de Helmintos/química , Platelmintos/classificação , Platelmintos/anatomia & histologia , Platelmintos/genética , Platelmintos/isolamento & purificação , DNA Ribossômico/química , RNA Ribossômico 28S/genética , Prevalência , Teorema de Bayes
15.
Acta Parasitol ; 2024 Aug 27.
Artigo em Inglês | MEDLINE | ID: mdl-39190278

RESUMO

BACKGROUND: Allocreadiids are relatively small digeneans that appear to be restricted to freshwater systems distributed across the world. Allocreadiids are highly diverse in the Americas, particularly in the Neotropical biogeographical region. Their taxonomic history has been rather controversial, with several taxonomic reassessments and the description of new genera and species. METHODS: We sampled Creptotrematina specimens from a characid collected in the Pardo River, Paranapanema River basin in Brazil, and specimens of C. aguirrepequenoi, from Astyanax spp. in several localities between northern Mexico and Costa Rica. The specimens were studied through integrative approaches using morphological and molecular analyses of the 28S rDNA gene and two different regions of the COI mtDNA gene. RESULTS: We describe a new species of Creptotrematina which is differentiated from other congeners by the overall body size, but in particular by the size and position of the cirrus-sac, distribution of the vitelline follicles, and extension of uterine loops in the posterior end of body. Phylogenetic analyses of the 28S rDNA and COI mtDNA genes placed the new species in a monophyletic clade together with all other sequenced species of Creptotrematina, and as a sister species of C. batalhensis. Genetic divergences between the new species and other Creptotrematina spp. varied from 1.1 to 1.2% for the 28S rDNA and 12.4-14.3% for the COI mtDNA. Phylogenetic analysis based on COI mtDNA showed the isolates of C. aguirrepequenoi grouped in four monophyletic clades representing populations geographically separated along a wide geographical range spanning between northern Mexico and Costa Rica, with an estimated genetic divergence between 3.9% and 8.9%. CONCLUSIONS: Our findings based on integrative analyses recognize Creptotrematina saltograndensis n. sp. from a characid collected in the Pardo River, Paranapanema River basin in Brazil and provide validation of the wide geographical distribution of C. aguirrepequenoi across Middle-America parasitizing Astyanax spp.; the genetic divergence of the species through the analysis of two regions of COI mtDNA points towards considering it represent a species complex, although we refrain at the moment on describing a new species, awaiting for further verification using other molecular markers, and obtaining fresh material for a more detailed taxonomic analyses. This study increases the known diversity of allocreadiids and contributes to the understanding of evolutionary relationships, host-parasite relationships, and biogeographic history of the group.

16.
Mycologia ; : 1-14, 2024 Aug 19.
Artigo em Inglês | MEDLINE | ID: mdl-39159076

RESUMO

Several members of the genus Peziza sensu stricto occur at the edge of melting snow. These nivicolous species have been widely reported in the Northern Hemisphere and are also known from Australia and New Zealand. We have used 16 specimens from North America and Australia to study morphology and to perform DNA sequencing. In sequence analyses, we have used ITS1 and ITS2 (internal transcribed spacers), 28S, RPB2 (RNA polymerase II gene), and two genes new to these studies, GAPDH (glyceraldehyde-3-phosphate dehydrogenase) and HSP90 (heat shock protein 90). Although not all regions are available for all samples, we have recognized the following species: Peziza heimii, P. nivalis, and P. nivis. Phylogenetic analyses were done using ITS alone; combined ITS1-5.8S-ITS2, 28S, and RPB2; ITS, and 28S, RPB2, GAPDH, and HSP90. Even with this augmented set of genes and despite their widespread occurrence in North America, Europe, Australia, and New Zealand, we have not definitively distinguished species within this group. To assess these results, pairwise homoplasy index (PHI) analysis was employed. This showed evidence of recombination among the samples of P. nivalis and further supports the view of P. nivalis as a monophyletic cosmopolitan species. As part of this study, we also examined the variation in ITS copies in P. echinospora, for which a genome is available.

17.
Animals (Basel) ; 14(16)2024 Aug 18.
Artigo em Inglês | MEDLINE | ID: mdl-39199925

RESUMO

The common Buzzard (Buteo buteo) was previously shown to transmit two Sarcocystis species (S. glareoli and S. microti) forming cysts in the brains of rodents. Due to a lack of research, the richness of Sarcocystis species spread by these birds of prey is expected to be much higher. A total of 30 samples of the small intestine of the Common Buzzard were collected in Lithuania and subjected to Sarcocystis species identification based on nested PCR of 28S rRNA and ITS1, following the sequencing of amplified DNA fragments. Six known Sarcocystis spp., S. cornixi, S. glareoli, S. halieti, S. kutkienae, S. turdusi, and S. wobeseri, along with three genetically distinct species (Sarcocystis sp. Rod3, Sarcocystis sp. Rod4, and Sarcocystis sp. Rod5), were identified. Phylogenetically, these three potentially new species clustered with Sarcocystis spp. characterised by a rodents-birds life cycle. Sarcocystis spp. employing rodents and birds as their intermediate hosts were detected in 66.7% and 50.0% of samples, respectively. These findings are consistent with the diet preferences of Common Buzzards. Notably, co-infections with two or more species were observed in a half of the samples. Altogether, the obtained results indicate that the Common Buzzard could serve as definitive host of various Sarcocystis species.

18.
Zoolog Sci ; 41(4): 377-384, 2024 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-39093283

RESUMO

Sea urchins have a wide variety of symbionts on their body surfaces and inside their bodies. Copepods of the genus Clavisodalis (Taeniacanthidae) collected from the esophagus of sea urchins of the genera Diadema and Echinothrix in southern Japan were identified based on their morphological characteristics, and molecular analysis was conducted to determine whether genetic variation occurs in copepods from different localities and hosts. Morphological observations identified individuals from southern Japan as Clavisodalis sentifer Dojiri and Humes, 1982, making this the first record of this species in the northern hemisphere and the first record of its genus in Japan. Morphological and molecular analysis suggested that the copepod specimens collected from multiple hosts across two genera would be the same species. Considering the typically observed high level of host specificity among taeniacanthid copepods, the utilization of hosts from two genera by C. sentifer is noteworthy.


Assuntos
Copépodes , Ouriços-do-Mar , Animais , Copépodes/genética , Copépodes/anatomia & histologia , Copépodes/fisiologia , Ouriços-do-Mar/genética , Ouriços-do-Mar/parasitologia , Oceano Pacífico , Filogenia , Japão , Especificidade de Hospedeiro
19.
Zookeys ; 1206: 137-180, 2024.
Artigo em Inglês | MEDLINE | ID: mdl-39006404

RESUMO

The species diversity of the genera Mononchus Bastian, 1865 and Coomansus Jairajpuri & Khan, 1977 was assessed in a study of the mononchid nematodes from a wide range of riparian habitats in Bulgaria. Four species were identified based on morphological and morphometric data: Coomansusparvus (de Man, 1880), Mononchustruncatus Bastian, 1865, Mononchuspseudoaquaticus sp. nov., and Mononchus sp. The first three species were characterised both morphologically and molecularly (18S and 28S rRNA gene sequences) and the integration of these data and phylogenetic analyses provided support for their distinct species status. This paper provides detailed descriptions, morphometric data for multiple species populations, drawings and photomicrographs, and the first taxonomically verified sequences for C.parvus (n = 6), M.truncatus (sensu stricto) (n = 4) and M.pseudoaquaticus sp. nov. (n = 3). Comparative sequence and phylogenetic analyses suggested that the utility of the 18S rRNA gene for species delimitation is rather limited at least for some species complexes within the genus Mononchus. At the generic and suprageneric level, the 18S and 28S rDNA phylogenies both recovered the three genera represented by two or more species (Mononchus, Mylonchulus, and Parkellus) as monophyletic with strong support, the Mononchidae as paraphyletic, the Anatonchidae as monophyletic, and there was no support for a sister-group relationship between Mylonchulus and Mononchus. A key to the species of Mononchus is provided to facilitate the identification of the currently recognised 31 species.

20.
Plant Dis ; 2024 Jul 17.
Artigo em Inglês | MEDLINE | ID: mdl-39021155

RESUMO

Lady Tankerville, a rare orchid species (Phaius tankervilleae (Banks ex L'Hér.) Blume) in Vietnam, not only enhances the aesthetic value of the surroundings with its enchanting blooms but also holds high economic value (Aver'janov & Averyanova, 2003). Investigating the necrosis symptom on the root system and declined Lady Tankerville in the market in Hai Duong province in Vietnam from 11/2020 to 12/2021, we discovered a substantial infestation (24/24 plants were infected) of a spiral nematode, Helicotylenchus sp. The nematode population was extracted from the rhizosphere soil, roots, and stems of a single orchid using the modified Baermann tray technique (Whitehead & Hemming, 1965), for thorough characterization. The average nematode density was measured at 525±85 (350-670) nematodes/250 cm3 of soil, 202±56 (198-264) nematodes/15 g of roots, and 80±15 (72-95) nematodes/15 g of stem. Two hundred nematodes from the same population were inoculated into another healthy orchid for preservation and further infection tests. This species was morphologically identified as Helicotylenchus dihystera according to the key of Fotedar and Kaul (1985) and the description of Sher (1966). Morphometric measurements of the females (n = 12) are as follows: body length = 632-725 (681 ± 32) µm; a = 24-34 (28 ± 3); b = 5.1-7.2 (6.0 ± 0.6); b' = 4.3-6.4 (5.3 ± 0.6); c = 33-46 (39 ± 5); c' = 1.1-1.4 (1.2 ± 0.1); V = 62-78 (65 ± 4)%; O = 30 -49 (39 ± 6); stylet length = 21-26 (24 ± 2) µm; DGO = 9.2-12.4 (10.8 ± 1.1) µm. To validate morphological observations, molecular analyses of the ITS (Vrain et al., 1992) and the D2-D3 of 28S rRNA (Subbotin et al., 2006) were conducted. The ITS and D2-D3 sequences from this study (accession number: PP060444 and PP033748) exhibited the highest similarity of 99.8% and 100% to the sequence of H. dihystera in GenBank (KM506885 and MW023215), respectively. The infection test took place in a greenhouse at 28 ± 2℃. Three-month-old Phaius tankervilleae (n=8) were individually grown in 15 x 15 cm deep pots filled with sterilized sand and inoculated with 500 gravid females of H. dihystera (Rashid & Azad, 2013). Two noninoculated plants served as controls. After 60 days of inoculation, symptoms such as sunspots and root necrosis, observed in the market, appeared in the tested plants (Fig. S1). The presence and diagnosis of H. dihystera infestation in soil, roots, and stems across growth stages of orchids indicates the nematode to be an obligate parasite. The nematodes penetrate the roots, causing characteristic necrotic lesions initially yellow, then turn reddish-brown to black, along with brown root flecks in discolored tissues. Heavy infestations post-flowering led to extensive necrosis, distortion, and decay of the roots. The average reproduction factor (final population/initial population) of H. dihystera in this study was 22.2. Control plants remained symptom-free. Notably, 100% of tested plants were infected, highlighting the severe impact of H. dihystera. The nematodes were successfully reisolated and identified as H. dihystera through molecular analyses (accession number: PP060615 (ITS) and PP033748 (D2-D3)), reaffirming its identity. In addition to 32 host plants in Vietnam (Nguyen et al., 2023), our study reveals a strain of H. dihystera parasitizing Lady Tankerville orchids with a relatively high reproduction factor and infection rate. This marks the first reported instance of H. dihystera parasitizing Lady Tankerville orchids in Vietnam, emphasizing the need for proactive measures to protect this plant.

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