Degradation of gaseous hydrocarbons in aerated stirred bioreactors inoculated with Rhodococcus erythropolis: Effect of the carbon source and SIFT-MS method development.

The study of microbial hydrocarbons removal is of great importance for the development of future bioremediation strategies. In this study, we evaluated the removal of a gaseous mixture containing toluene, m-xylene, ethylbenzene, cyclohexane, butane, pentane, hexane and heptane in aerated stirred bioreactors inoculated with Rhodococcus erythropolis and operated under non-sterile conditions. For the real-time measurement of hydrocarbons, a novel systematic approach was implemented using Selected-Ion Flow Tube Mass Spectrometry (SIFT-MS). The effect of the carbon source (∼9.5 ppmv) on (i) the bioreactors' performance (BR1: dosed with only cyclohexane as a single hydrocarbon versus BR2: dosed with a mixture of the 8 hydrocarbons) and (ii) the evolution of microbial communities over time were investigated. The results showed that cyclohexane reached a maximum removal efficiency (RE) of 53% ± 4% in BR1. In BR2, almost complete removal of toluene, m-xylene and ethylbenzene, being the most water-soluble and easy-to-degrade carbon sources, was observed. REs below 32% were obtained for the remaining compounds. By exposing the microbial consortium to only the five most recalcitrant hydrocarbons, REs between 45% ± 5% and 98% ± 1% were reached. In addition, we observed that airborne microorganisms populated the bioreactors and that the type of carbon source influenced the microbial communities developed. The abundance of species belonging to the genus Rhodococcus was below 10% in all bioreactors at the end of the experiments. This work provides fundamental insights to understand the complex behavior of gaseous hydrocarbon mixtures in bioreactors, along with a systematic approach for the development of SIFT-MS methods.

Enzymatic Degradation toward Herbicides: The Case of the Sulfonylureas.

Commercial herbicides, particularly sulfonylureas, are used worldwide and pose a significant challenge to environmental sustainability. The efficient degradation of sulfonylurea herbicides is critical. SulE, an esterase isolated from the bacterial strain Hansschlegelia zhihuaiae S113, shows degradation activity toward sulfonylurea herbicides. However, the detailed catalytic mechanism remains vague to a large extent. Herein, we decipher the SulEP44R-catalyzed degradation mechanism of sulfonylurea herbicides using hybrid quantum mechanics and molecular mechanics approaches. Our results show that the degradation of sulfonylureas catalyzed by SulEP44R involves four concerted elementary steps. The rate-determining step has an energy barrier range of 19.7-21.4 kcal·mol-1, consistent with the experimentally determined range of 16.0-18.0 kcal·mol-1. Distortion/interaction analysis demonstrates that active-site amino acids play a vital role in the enzymatic catalytic efficacy. The unique architecture of SulEP44R's active site can serve as an excellent template for designing artificial catalysts. Key structural and charge parameters affecting catalytic activity were systematically screened and identified. Based on the elucidated degradation mechanism, several new herbicides with both high herbicidal activity and biodegradability were developed with the aid of a high-throughput strategy. Our findings may advance the application of sulfonylurea herbicides within the framework of environmental sustainability.

Design and construction of an artificial labor-division consortium for phenanthrene degradation with three-functional modules.

Polycyclic Aromatic Hydrocarbons (PAHs) are highly toxic organic pollutants. Phenanthrene often serves as a model compound for studying PAHs biodegradation. In this work, we firstly engineered Escherichia coli M01 containing seven phenanthrene degradation genes and combined it with existing engineered strains E. coli M2 and M3 to form an artificial three-bacteria consortium, named M0123, which exhibited a degradation ratio of 64.66% for 100 mg/L of phenanthrene over 8 days. Subsequently, we constructed engineered Pseudomonas putida KTRL02 which could produce 928.49 mg/L rhamnolipids and integrated it with M0123, forming a four-bacteria consortium with an impressive 81.62% phenanthrene degradation ratio. Assessment of extracellular adenosine levels during the degradation process indicated high cellular energy demand in the four-bacteria consortium. Then, we introduced Bacillus subtilis RH33, a riboflavin-producing strain, as an energy-supplying bacterium, to create a five-bacteria consortium, which exhibited an 88.19% degradation ratio for phenanthrene. The NADH/NAD+ ratio in the five-bacteria consortium during the degradation process was monitored, which was consistently higher than that of the four-bacteria consortium over the eight-day period, indicating a higher overall intracellular reduction capacity. Furthermore, the five-bacteria consortium displayed good tolerance to phenanthrene, even achieving a degradation ratio of 79.38% for 500 mg/L of phenanthrene. This study demonstrates that designing and constructing artificial consortia from the functional perspective and various angles can effectively enhance the degradation of phenanthrene after the addition of the energy-supplying bacterium. This study demonstrates that designing and constructing artificial labor-division consortia from the functional perspective and various angles can effectively enhance the degradation of phenanthrene.

Nature based solutions for removal of steroid estrogens in wastewater.

Estrogens are a growing problem in wastewater discharges because they are continuously entering the environment and are biologically active at extremely low concentrations. Their effects on wildlife were first identified several decades before, but the environmental limits and the remedial measures are still not completely elucidated. Most conventional treatment processes were not designed with sufficiently long retention times to effectively remove estrogens. Nature-based wastewater treatment technologies such as treatment wetlands (TW) and high-rate algal ponds (HRAP) are economically feasible alternatives for decentralized wastewater treatment and have promise for removing steroid hormones including estrogens. For small communities with populations below 50,000, the overall cost of TWs and HRAPs is considerably lower than that of advanced decentralized treatment technologies such as activated sludge systems (AS) and sequencing batch reactors (SBR). This results from the simplicity of design, use of less materials in construction, lower energy use, operation and maintenance costs, and operation by non-skilled personnel. The nature-based technologies show high removal (>80%) for both natural and synthetic estrogens. Estrogen removal in TWs can be enhanced using alternative media such as palm mulch, biochar, and construction wastes such as bricks, instead of traditional substrates such as sand and gravel. While TWs are effective in estrogen removal, they have the disadvantage of requiring a relatively large footprint, but this can be reduced by using intensified multilayer wetland filters (IMWF). Using filamentous algae in HRAP (high-rate filamentous algal pond; HRFAP) is an emerging technology for wastewater treatment. The algae supply oxygen via photosynthesis and assimilate nutrients into readily harvestable filamentous algal biomass. Diurnal fluctuations in oxygen supply and pH in these systems provide conditions conducive to the breakdown of estrogens and a wide range of other emerging contaminants. The performance of these nature-based systems varies with seasonal changes in environmental conditions (particularly temperature and solar irradiation), however a greater understanding of operating conditions such as loading rate, hydraulic retention time (HRT), pond/bed depth, dissolved oxygen (DO) concentration and pH, which influence the removal mechanisms (biodegradation, sorption and photodegradation) enable TWs and HRAPs to be successfully used for removing estrogens.

Mechanical deviation in 3D-Printed PLA bone scaffolds during biodegradation.

Large or carcinogenic bone defects may require a challenging bone tissue scaffold design ensuring a proper mechanobiological setting. Porosity and biodegradation rate are the key parameters controlling the bone-remodeling process. PLA presents a great potential for geometrically flexible 3-D scaffold design. This study aims to investigate the mechanical variation throughout the biodegradation process for lattice-type PLA scaffolds using both experimental observations and simulations. Three different unit-cell geometries are used for creating the scaffolds: basic cube (BC), body-centered structure (BCS), and body-centered cube (BCC). Three different porosity ratios, 50 %, 62.5 %, and 75 %, are assigned to all three structures by altering their strut dimensions. 3-D printed scaffolds are soaked in PBS solution at 37 °C for 15, 30, 60, 90, and 120 days both unloaded and under dead load. Water absorption, weight loss, and compression stiffness are measured to characterize the first-stage degradation and investigate the possible influences of these parameters on the whole biodegradation process. The strength reduction stage of biodegradation is simulated by solving pseudo-first-order kinetics-based molecular weight change equation using FEA with equisized cubic (voxel-like) elements. For the first stage, mechanical load does not have a statistically significant effect on biodegradation. BCC with 62.5 % porosity shows a maximum water absorption rate of around 25 % by the 60th day which brings an advantage in creating an aquatic environment for cell growth. Results indicate a significant water deposition inside almost all scaffolds and water content is determined to be the main reason for the retained or increased compression stiffness. A distinguishable stiffness increase in the initial degradation process occurs for 75 % porous BC and 50 % porous BCC scaffolds. Following the quasi-stable stage of biodegradation, almost all scaffolds lost their rigidity by around 44-48 % within 120 days based on numerical results. Therefore, initial stiffness increase in the quasi-stable stage of biodegradation can be advantageous and BCC geometry with a porosity between 50% and 62 % is the optimum solution for the whole biodegradation process.

Microbial degradation of contaminants of emerging concern: metabolic, genetic and omics insights for enhanced bioremediation.

The perpetual release of natural/synthetic pollutants into the environment poses major risks to ecological balance and human health. Amongst these, contaminants of emerging concern (CECs) are characterized by their recent introduction/detection in various niches, thereby causing significant hazards and necessitating their removal. Pharmaceuticals, plasticizers, cyanotoxins and emerging pesticides are major groups of CECs that are highly toxic and found to occur in various compartments of the biosphere. The sources of these compounds can be multipartite including industrial discharge, improper disposal, excretion of unmetabolized residues, eutrophication etc., while their fate and persistence are determined by factors such as physico-chemical properties, environmental conditions, biodegradability and hydrological factors. The resultant exposure of these compounds to microbiota has imposed a selection pressure and resulted in evolution of metabolic pathways for their biotransformation and/or utilization as sole source of carbon and energy. Such microbial degradation phenotype can be exploited to clean-up CECs from the environment, offering a cost-effective and eco-friendly alternative to abiotic methods of removal, thereby mitigating their toxicity. However, efficient bioprocess development for bioremediation strategies requires extensive understanding of individual components such as pathway gene clusters, proteins/enzymes, metabolites and associated regulatory mechanisms. "Omics" and "Meta-omics" techniques aid in providing crucial insights into the complex interactions and functions of these components as well as microbial community, enabling more effective and targeted bioremediation. Aside from natural isolates, metabolic engineering approaches employ the application of genetic engineering to enhance metabolic diversity and degradation rates. The integration of omics data will further aid in developing systemic-level bioremediation and metabolic engineering strategies, thereby optimising the clean-up process. This review describes bacterial catabolic pathways, genetics, and application of omics and metabolic engineering for bioremediation of four major groups of CECs: pharmaceuticals, plasticizers, cyanotoxins, and emerging pesticides.

Co-metabolism of microorganisms: A study revealing the mechanism of antibiotic removal, progress of biodegradation transformation pathways.

The widespread use of antibiotics has resulted in large quantities of antibiotic residues entering aquatic environments, which can lead to the development of antibiotic-resistant bacteria and antibiotic-resistant genes, posing a potential environmental risk and jeopardizing human health. Constructing a microbial co-metabolism system has become an effective measure to improve the removal efficiency of antibiotics by microorganisms. This paper reviews the four main mechanisms involved in microbial removal of antibiotics: bioaccumulation, biosorption, biodegradation and co-metabolism. The promotion of extracellular polymeric substances for biosorption and extracellular degradation and the regulation mechanism of enzymes in biodegradation by microorganisms processes are detailed therein. Transformation pathways for microbial removal of antibiotics are discussed. Bacteria, microalgae, and microbial consortia's roles in antibiotic removal are outlined. The factors influencing the removal of antibiotics by microbial co-metabolism are also discussed. Overall, this review summarizes the current understanding of microbial co-metabolism for antibiotic removal and outlines future research directions.

Variability of Biodegradation Rates of Commercial Chemicals in Rivers in Different Regions of Europe.

Biodegradation is one of the most important processes influencing the fate of organic contaminants in the environment. Quantitative understanding of the spatial variability in environmental biodegradation is still largely uncharted territory. Here, we conducted modified OECD 309 tests to determine first-order biodegradation rate constants for 97 compounds in 18 freshwater river segments in five European countries: Sweden, Germany, Switzerland, Spain, and Greece. All but two of the compounds showed significant spatial variability in rate constants across European rivers (ANOVA, P < 0.05). The median standard deviation of the biodegradation rate constant between rivers was a factor of 3. The spatial variability was similar between pristine and contaminated river segments. The longitude, total organic carbon, and clay content of sediment were the three most significant explanatory variables for the spatial variability (redundancy analysis, P < 0.05). Similarities in the spatial pattern of biodegradation rates were observed for some groups of compounds sharing a given functional group. The pronounced spatial variability presents challenges for the use of biodegradation simulation tests to assess chemical persistence. To reflect the variability in the biodegradation rate, the modified OECD 309 test would have to be repeated with water and sediment from multiple sites.

Review on Biodegradable Aliphatic Polyesters: Development and Challenges.

Biodegradable polymers are gaining attention as alternatives to non-biodegradable plastics to address environmental issues. With the rising global demand for plastic products, the development of non-toxic, biodegradable plastics is a significant topic of research. Aliphatic polyester, the most common biodegradable polyester, is notable for its semi-crystalline structure and can be synthesized from fossil fuels, microbial fermentation, and plants. Due to great properties like being lightweight, biodegradable, biocompatible, and non-toxic, aliphatic polyesters are used in packaging, medical, agricultural, wearable devices, sensors, and textile applications. The biodegradation rate, crucial for biodegradable polymers, is discussed in this review as it is influenced by their structural properties and environmental conditions. This review discusses currently available biodegradable polyesters, their emerging applications, and the challenges in their commercialization. As research in this area grows, this review emphasizes the innovation in biodegradable aliphatic polyesters and their role in advancing environmental sustainability.

Track of methylparaben in the bulk phase and on the extracellular matrix of dual-species biofilms: Biodegradation and bioaccumulation.

Methylparaben (MP) is a preservative considered an environmental contaminant of emerging concern due to its persistence in water sources, including drinking water (DW). This study assesses the interaction between MP and dual-species biofilms of Acinetobacter calcoaceticus and Stenotrophomonas maltophilia. These biofilms were grown under realism-based conditions in a multiple-cylinder biofilm reactor on polypropylene (PPL) surfaces, for 7 days, and then exposed to MP at 0.5 mg/L for three consecutive days. S. maltophilia predominantly succeeds within these biofilms compared to A. calcoaceticus. Exposure to MP resulted in a 4-fold increase in the number of culturable cells and a 1.4-fold rise in polysaccharide content, suggesting that bacterial cells may utilize MP as a carbon source to enhance biofilm fitness. MP was found to adsorb to PPL with biofilms following a pseudo-second-order kinetic model. Circa 37 % of MP adsorbed to PPL after 3 days of exposure. Besides that, MP was biodegraded by biofilms following an apparent first-order kinetic model. Part (25 %) of the MP was biodegraded whereas only 0.02 % bioaccumulated on the biofilm matrix. Biodegradation was related to esterase and lipase activity. The results provide new insights into the interaction between MP with biofilms and materials used in DW industries.

The threat of microplastics and microbial degradation potential; a current perspective.

Microplastics in marine environments come from various sources, and over the years, their buildup in marine environments suggests an inevitable need for the safe mitigation of plastic pollution. Microplastics are one of the chief and hazardous components of marine pollution, as they are transferred through the food chain to different trophic levels, affecting living organisms. They are also a source of transfer for pathogenic organisms. Upon transfer to humans, several toxic effects can occur. This review aims to assess the accumulation of microplastics in marine environments globally, the threat posed to humans, and the biodegradation potential of bacteria and fungi for future mitigation strategies. The versatility of bacteria and fungi in the biodegradation of different types of plastics has been discussed, with a focus on the microbial majority that has been cultivated in labs from the marine environment. We also propose that the exploration of yet-to-be-cultivated microbial majority can be a way forward for employing future strategies to mitigate microplastics.

Osteogenic Potential and Long-Term Enzymatic Biodegradation of PHB-based Scaffolds with Composite Magnetic Nanofillers in a Magnetic Field.

Millions of people worldwide suffer from musculoskeletal damage, thus using the largest proportion of rehabilitation services. The limited self-regenerative capacity of bone and cartilage tissues necessitates the development of functional biomaterials. Magnetoactive materials are a promising solution due to clinical safety and deep tissue penetration of magnetic fields (MFs) without attenuation and tissue heating. Herein, electrospun microfibrous scaffolds were developed based on piezoelectric poly(3-hydroxybutyrate) (PHB) and composite magnetic nanofillers [magnetite with graphene oxide (GO) or reduced GO]. The scaffolds' morphology, structure, mechanical properties, surface potential, and piezoelectric response were systematically investigated. Furthermore, a complex mechanism of enzymatic biodegradation of these scaffolds is proposed that involves (i) a release of polymer crystallites, (ii) crystallization of the amorphous phase, and (iii) dissolution of the amorphous phase. Incorporation of Fe3O4, Fe3O4-GO, or Fe3O4-rGO accelerated the biodegradation of PHB scaffolds owing to pores on the surface of composite fibers and the enlarged content of polymer amorphous phase in the composite scaffolds. Six-month biodegradation caused a reduction in surface potential (1.5-fold) and in a vertical piezoresponse (3.5-fold) of the Fe3O4-GO scaffold because of a decrease in the PHB ß-phase content. In vitro assays in the absence of an MF showed a significantly more pronounced mesenchymal stem cell proliferation on composite magnetic scaffolds compared to the neat scaffold, whereas in an MF (68 mT, 0.67 Hz), cell proliferation was not statistically significantly different when all the studied scaffolds were compared. The PHB/Fe3O4-GO scaffold was implanted into femur bone defects in rats, resulting in successful bone repair after nonperiodic magnetic stimulation (200 mT, 0.04 Hz) owing to a synergetic influence of increased surface roughness, the presence of hydrophilic groups near the surface, and magnetoelectric and magnetomechanical effects of the material.

Biodegradation of untreated plasticizers-free linear low-density polyethylene films by marine bacteria.

Polyethylene significantly contributes to marine plastic pollution. This study focuses on isolating bacteria from sea water and microplastic samples collected from the Tyrrhenian Sea and evaluating their ability to degrade virgin plasticizers-free linear low-density polyethylene (LLDPE) films. The isolates grew on the plastic film under aerobic conditions in shaken flasks leading to LLDPE mass losses of up to 2.597 ± 0.971 % after 60 days incubation. Biofilm formation on the film surface was confirmed by adhered protein quantification while film surface erosion and appearance of functional groups were revealed using SEM and FTIR analyses confirming biodegradation capabilities especially for isolates Bacillus velezensis MT9, Vreelandella venusta MT1 and Vreelandellatitanicae MT11. This is the first report on the biodegradation of plasticizers-free non pretreated LLDPE films by marine Bacillus sp. and Vreelandella sp.; most of the LLDPE biodegradation studies have been so far performed on plasticizer containing, pre-treated, or naturally weathered films.

Yeast-enhanced activated sludge for improved nitrogen removal in wastewater treatment: Focus on dissolved organic nitrogen degradation.

Dissolved organic nitrogen (DON) in effluent of wastewater treatment plants (WWTP), particularly hydrophilic DON, is usually more effective than dissolved inorganic nitrogen (DIN) in stimulating phytoplankton growth and increases the risk of eutrophication in receiving waterbodies. Proteins, amino acids, and nucleic acids, which are the main sources of DON in the effluent, are produced during the hydrolysis of extracellular polymeric substances (EPS) in activated sludge. Herein, a yeast strain Candida tropicalis O2, which was highly efficient in degrading DON in EPS was screened. Within 48-h batch experiments, the DON removal rates of the extracted hydrophilic and hydrophobic EPS reached 68.26% and 59.27%, respectively. During the continuous 35-day operation of sequencing batch bioreactor (SBR) fed with synthetic wastewater, the yeast-enhanced activated sludge (AS-Y) reactor demonstrated a marked improvement in removing various pollutants compared to the traditional activated sludge (AS) reactor. Specifically, DON removal increased by 1.53 mg/L (24.75%), hydrophilic DON by 1.24 mg/L (27.13%), hydrophobic DON by 0.28 mg/L (12.08%), and COD removal by 4.04 mg/L (6.48%). Although the DIN removal decreased by 0.38 mg/L (3.86%), it did not attenuate the overall TN removal from the system, and an additional TN reduction of 1.15 mg/L (7.13%) was achieved. Metagenomic analysis showed that adding strain O2 slightly inhibited the DIN metabolism, and the relative abundances of napB, nirK/S, norB/C, and nosZ involved in denitrification somewhat decreased. Kyoto Encyclopedia of Genes and Genomes and Carbohydrate-Active Enzymes annotations revealed that adding strain O2 promoted amino acid and carbohydrate metabolism. The increased relative abundance of Candida indicated that strain O2 was able to colonize the sludge in AS-Y reactor, which was conducive to synergistic interactions with other microorganisms. This study provided a novel method for in situ improving nitrogen removal in WWTP and reducing the eutrophication risk of the effluent to receiving waterbodies.

Chitin membrane for efficient laccase immobilization and synergistic removal of 17α-ethynylestradiol from water-based solutions.

A unique chitin-laccase membrane was fabricated as an environmentally friendly biocatalytic platform, utilizing 1-butyl-3-methylimidazolium acetate as the solvent for chitin. Observations using scanning electron microscopy showed that the chitin-laccase membrane possessed a uniform and densely packed structure. Based on the presence of FT-IR signals at 1020 cm-1 and changes in the intensity of signals at 1540 cm-1 and 1645 cm-1, the effectiveness of laccase immobilization was confirmed. FT-IR mapping revealed that the enzyme is evenly distributed on the surface of the membrane. The catalytic activity of the native enzyme and laccase immobilized using the membrane was determined based on a model reaction, and the retention of high activity was confirmed using real solutions. Laccase immobilized using the chitinous membrane retained over 60 % of its initial activity after 30 days of storage at 4 °C. By contrast, the free enzyme retained <40 % of its initial activity. Moreover, the activity of chitin-laccase system remained at 85 % after 5 cycles. This novel chitin-laccase combination was tested in the 17α-ethynylestradiol (EE2) removal from water-based solutions. It was found that EE2 underwent synergistic degradation through concurrent adsorption and biocatalytic transformation, with enzymatic conversion as the dominant mechanism.

Fungal microbiota of biodamages of various polymeric materials.

Data on microbial fouling of various synthetic polymer materials, including those used in space technology, are summarized. It has been established that the dominant groups of microbiota of polymer fouling are the genera of mitosporous fungi Aspergillus, Penicillium, Alternaria, Trichoderma. The enzymatic properties of fungal strains from the collection of microbial cultures of the Microbial Depository Center of the National Academy of Sciences of Armenia were studied. It has been shown that Aspergillus fumigatus, Penicillium chrysogenum, P. steckii, Juxtiphoma eupyrena and a number of other fungi have biofouling activity towards polyethylene, polyethylene terephthalate and some other synthetic polymers. New fungal kits have been developed and proposed to evaluate the fungal resistance of polymeric materials. They include fungi isolated from bio-damaged polymers used in space technology and contain 2 to 5 fungal strains instead of 7 to 9 strains in previously used kits. Taking into account the obtained data, a comparative assessment of the fungal resistance of samples of synthetic polymeric materials of various classes that passed accelerated climatic tests has been carried out. It has been established that the kits of biodegradant fungi, composed of cultures of bio-damaged space technology, generally exceeded the activity of the previously used kits, based on which one can judge the obvious advantages of strains isolated from bio-damaged space technology. In the future, these kits could find application not only for biodegradation of polymers, but also for testing the biostability of various polymers, to use for the construction of aviation and space techniques. Moreover, new optimized kits may be developed based on the strains involved in this study.

Isolation and Identification of Four Strains of Bacteria with Potential to Biodegrade Polyethylene and Polypropylene from Mangrove.

With the rapid growth of global plastic production, the degradation of microplastics (MPs) has received widespread attention, and the search for efficient biodegradation pathways has become a hot topic. The aim of this study was to screen mangrove sediment and surface water for bacteria capable of degrading polyethylene (PE) and polypropylene (PP) MPs. In this study, two strains of PE-degrading bacteria and two strains of PP-degrading candidate bacteria were obtained from mangrove, named Pseudomonas sp. strain GIA7, Bacillus cereus strain GIA17, Acinetobacter sp. strain GIB8, and Bacillus cereus strain GIB10. The results showed that the degradation rate of the bacteria increased gradually with the increase in degradation time for 60 days. Most of the MP-degrading bacteria had higher degradation rates in the presence of weak acid. The appropriate addition of Mg2+ and K+ was favorable to improve the degradation rate of MPs. Interestingly, high salt concentration inhibited the biodegradation of MPs. Results of scanning electron microscopy (SEM), atomic force microscopy (AFM), and Fourier-transform infrared spectroscopy (FTIR) indicated the degradation and surface changes of PP and PE MPs caused by candidate bacteria, which may depend on the biodegradation-related enzymes laccase and lipase. Our results indicated that these four bacterial strains may contribute to the biodegradation of MPs in the mangrove environment.

A Novel Cold-Adapted Nitronate Monooxygenase from Psychrobacter sp. ANT206: Identification, Characterization and Degradation of 2-Nitropropane at Low Temperature.

Aliphatic nitro compounds cause environmental pollution by being discharged into water with industrial waste. Biodegradation needs to be further explored as a green and pollution-free method of environmental remediation. In this study, we successfully cloned a novel nitronate monooxygenase gene (psnmo) from the genomic DNA library of Psychrobacter sp. ANT206 and investigated its ability to degrade 2-nitropropane (2-NP). Homology modeling demonstrated that PsNMO had a typical I nitronate monooxygenase catalytic site and cold-adapted structural features, such as few hydrogen bonds. The specific activity of purified recombinant PsNMO (rPsNMO) was 97.34 U/mg, rPsNMO exhibited thermal instability and reached maximum catalytic activity at 30 °C. Moreover, rPsNMO was most active in 1.5 M NaCl and remained at 104% of its full activity in 4.0 M NaCl, demonstrating its significant salt tolerance. Based on this finding, a novel bacterial cold-adapted enzyme was obtained in this work. Furthermore, rPsNMO protected E. coli BL21 (DE3)/pET28a(+) from the toxic effects of 2-NP at 30 °C because the 2-NP degradation rate reached 96.1% at 3 h and the final product was acetone. These results provide a reliable theoretical basis for the low-temperature degradation of 2-NP by NMO.

Plastic-Degrading Enzymes from Marine Microorganisms and Their Potential Value in Recycling Technologies.

Since the 2005 discovery of the first enzyme capable of depolymerizing polyethylene terephthalate (PET), an aromatic polyester once thought to be enzymatically inert, extensive research has been undertaken to identify and engineer new biocatalysts for plastic degradation. This effort was directed toward developing efficient enzymatic recycling technologies that could overcome the limitations of mechanical and chemical methods. These enzymes are versatile molecules obtained from microorganisms living in various environments, including soil, compost, surface seawater, and extreme habitats such as hot springs, hydrothermal vents, deep-sea regions, and Antarctic seawater. Among various plastics, PET and polylactic acid (PLA) have been the primary focus of enzymatic depolymerization research, greatly enhancing our knowledge of enzymes that degrade these specific polymers. They often display unique catalytic properties that reflect their particular ecological niches. This review explores recent advancements in marine-derived enzymes that can depolymerize synthetic plastic polymers, emphasizing their structural and functional features that influence the efficiency of these catalysts in biorecycling processes. Current status and future perspectives of enzymatic plastic depolymerization are also discussed, with a focus on the underexplored marine enzymatic resources.

Biodegradation of Heterogeneous Industrial Multi-Walled Carbon Nanotubes by Pro-Inflammatory Macrophages.

Industrial multi-walled carbon nanotubes (ig-MWCNTs) make up the majority of carbon nanomaterials, and human contact with them is the most probable. At the same time, the biodegradation of ig-MWCNTs by phagocytes has not been studied-existing articles consider mainly laboratory-grade/functionalized MWCNTs (l-MWCNTs), in contrast to which ig-MWCNTs are a highly heterogeneous nanomaterial in terms of morphological and physicochemical characteristics. The aim of the present study was to analyze ig-MWCNTs' biodegradation by proinflammatory macrophages. We focused on both extra- and intracellular ig-MWCNTs' degradation. We analyzed biodegradation of two different types of ig-MWCNTs by human (THP-1) and murine (RAW264.7) macrophages. After 10 days of incubation, we studied nanoparticle localization within cells; isolated intra- and extracellular ig-MWCNTs were used for quantitative analysis. Ultrastructural and morphometric analysis were performed using transmission electron microscopy; electron diffraction was used for nanotube identification. To estimate chemical alterations, energy-dispersive X-ray spectroscopy and Raman spectroscopy were used. The study showed that both intra- and extracellular ig-MWCNTs undergo almost complete biodegradation, but in different ways: intracellular nanotubes become perforated and reduce to graphene flakes, while extracellular become thinner. We believe that the demonstrated variability in the destruction of ig-MWCNTs by cells suggests the possibility of creating nanomaterials with controlled biodegradation properties.