Microwave-Assisted Synthesis, Structural Characterization and Assessment of the Antibacterial Activity of Some New Aminopyridine, Pyrrolidine, Piperidine and Morpholine Acetamides.

A series of new acetamide derivatives 22-28 of primary and secondary amines and para-toluene sulphinate sodium salt have been synthesized under microwave irradiation and assessed in vitro for their antibacterial activity against one Gram-positive and two Gram-negative bacterial species such as S. pyogenes, E. coli, and P. mirabilis using the Mueller-Hinton Agar diffusion (well diffusion) method. The synthesized compounds with significant differences in inhibition diameters and MICs were compared with those of amoxicillin, ampicillin, cephalothin, azithromycin and doxycycline. All of the evaluated acetamide derivatives were used with varying inhibition concentrations of 6.25, 12.5, 37.5, 62.5, 87.5, 112.5 and 125 µg/mL. The results show that the most important antibacterial properties were displayed by the synthetic compounds 22 and 24, both of bear a para-chlorophenyl moiety incorporated into the 2-position moiety of acetamide 1. The molecular structures of the new compounds were determined using the FT-IR and 1H-NMR techniques.

Development of Photoactivatable Allosteric Modulators for the Chemokine Receptor CXCR3.

The CXCR3 receptor, a class A G protein-coupled receptor (GPCR), is involved in the regulation and trafficking of various immune cells. CXCR3 antagonists have been proposed to be beneficial for the treatment of a wide range of disorders including but not limited to inflammatory and autoimmune diseases. The structure-based design of CXCR3 ligands remains, however, hampered by a lack of structural information describing in detail the interactions between an allosteric ligand and the receptor. We designed and synthesized photoactivatable probes for the structural and functional characterization, using photoaffinity labeling followed by mass spectrometry, of the CXCR3 allosteric binding pocket of AMG 487 and RAMX3, two potent and selective CXCR3 negative allosteric modulators. Photoaffinity labeling is a common approach to elucidate binding modes of small-molecule ligands of GPCRs through the aid of photoactivatable probes that convert to extremely reactive intermediates upon photolysis. The photolabile probe N-[({1-[3-(4-ethoxyphenyl)-4-oxo-3,4-dihydropyrido[2,3-d]pyrimidin-2-yl]ethyl}-2-[4-fluoro-3-(trifluoromethyl)phenyl]-N-{1-[4-(3-(trifluoromethyl)-3H-diazirin-3-yl]benzyl}piperidin-4-yl)methyl]acetamide (10) showed significant labeling of the CXCR3 receptor (80%) in a [(3) H]RAMX3 radioligand displacement assay. Compound 10 will serve as an important tool compound for the detailed investigation of the binding pocket of CXCR3 by mass spectrometry.

Decontamination of alachlor herbicide wastewater by a continuous dosing mode ultrasound/Fe(2+)/H2O2 process.

We used a ultrasound/Fe(2+)/H2O2 process in continuous dosing mode to degrade the alachlor. Experimental results indicated that lower pH levels enhanced the degradation and mineralization of alachlor. The maximum alachlor degradation (initial alachlor concentration of 50 mg/L) was as high as 100% at pH 3 with ultrasound of 100 Watts, 20 mg/L of Fe(2+), 2 mg/min of H2O2 and 20°C within 60 min reaction combined with 46.8% total organic carbon removal. Higher reaction temperatures inhibited the degradation of alachlor. Adequate dosages of Fe(2+) and H2O2 in ultrasound/Fe(2+)/H2O2 process not only enhance the degradation efficiency of alachlor but also save the operational cost than the sole ultrasound or Fenton process. A continuous dosing mode ultrasound/Fe(2+)/H2O2 process was proven as an effective method to degrade the alachlor.

Identification and ecotoxicity of degradation products of chloroacetamide herbicides from UV-treatment of water.

The widespread occurrence of chlorinated herbicides and their degradation products in the aquatic environment raises health and environmental concerns. As a consequence pesticides, and to a lesser degree their degradation products, are monitored by authorities both in surface waters and drinking waters. In this study the formation of degradation products from ultraviolet (UV) treatment of the three chloroacetamide herbicides acetochlor, alachlor and metolachlor and their biological effects were investigated. UV treatment is mainly used for disinfection in water and wastewater treatments. First, the chemical structures of the main UV-degradation products were identified using gas chromatography coupled with mass spectrometry and liquid chromatography-mass spectrometry. The main transformation reactions were dechlorination, mono- and multi-hydroxylation and cyclizations. The ecotoxicity of the mixed photoproducts formed by UV-treatment until 90% of the original pesticide was converted was compared to the toxicity of chloroacetamides using the green alga Pseudokirchneriella subcapitata, the crustacean Daphnia magna and the marine bacteria Vibrio fischeri as test organisms. UV-treatment of alachlor and metolachlor increased the toxicity compared to the parent compounds while an equal toxicity was found for photolysis products of acetochlor. This suggests that toxic photodegradation products are generated from chloroacetamides under UV-treatment. An important perspective of this finding is that the photolysis products are at least as toxic as the parent compounds.

Adsorption and desorption behavior of selected pesticides as influenced by decomposition of maize mulch.

Assessing pesticide fate in conservation agricultural systems requires a detailed understanding of their interaction with decomposing surface crop residues (mulch). Adsorption and desorption behavior of glyphosate, s-metolachlor and epoxiconazole was investigated on maize mulch residues decomposed under laboratory and field conditions. Our conceptual approach included characterization of chemical composition and hydrophobicity of mulch residues in order to generate parameters to predict sorption behavior. Adsorption of s-metolachlor and epoxiconazole greatly increased with mulch decomposition, whereas glyphosate adsorption was less affected but its desorption was increased. Mulch characteristics including aromaticity, hydrophobicity and polarity indices were strongly correlated to Koc of the non-ionic pesticides. A predictive model based on compositional data (CoDa) analysis revealed that the sorption capacity of decomposing mulch can be predicted from descriptors such as aromatic and alkyl C corresponding respectively to lignin and NDF biochemical fractions. The decomposition degree of mulch residues should be taken into account while predicting the fate of pesticides.

Reactor model development: the removal performance of ferrous-catalysed photo-oxidation process by examining the reaction parameters.

The removal performance of the ferrous catalysed photo-oxidation process was investigated through the examination of major process parameters including pH levels and dosages of ferrous (Fe(2+)) and hydrogen peroxide (H(2)O(2)). A common used herbicide, alachlor, was used as a target compound in the degradation process. In the study, alachlor was found to be effectively degraded by hydroxyl radicals (HO) which were generated by UV/Fe(2+)/H(2)O(2) in the oxidation process. It was interesting to find that the pattern of reaction kinetics of alachlor varied depending on the initial concentrations of Fe(2+) and H(2)O(2). An optimum H(2)O(2) dosage was determined. This was practically useful because the overdose of H(2)O(2) would cause the process retardation. The conventional pseudo-first-order kinetics and two-stage first-order kinetics were observed at lower and higher Fe(2+) concentrations, respectively. Models were proposed and used to stimulate the kinetic process. Thus, design charts were established for determining the reaction time (i.e., reactor sizing) required for predetermined removal performance of alachlor under different concentrations of H(2)O(2) and Fe(2+).

Degradation of alachlor and pyrimethanil by combined photo-Fenton and biological oxidation.

Biodegradability of aqueous solutions of the herbicide alachlor and the fungicide pyrimethanil, partly treated by photo-Fenton, and the effect of photoreaction intermediates on growth and DOC removal kinetics of the bacteria Pseudomonas putida CECT 324 are demonstrated. Toxicity of 30-120 mg L(-1) alachlor and pyrimethanil has been assayed in P. putida. The biodegradability of photocatalytic intermediates found at different photo-treatment times was evaluated for each pesticide. At a selected time during batch-mode phototreatment, larger-scale biodegradation kinetics were analysed in a 12 L bubble column bioreactor. Both alachlor and pyrimethanil are non-toxic for P. putida CECT 324 at the test concentrations, but they are not biodegradable. A approximately 100 min photo-Fenton pre-treatment was enough to enhance biodegradability, the biological oxidation response being dependent on the pesticide tested. The different alachlor and pyrimethanil respiration and carbon uptake rates in pre-treated solutions are related to change in the growth kinetics of P. putida. Reproducible results have shown that P. putida could be a suitable microorganism for determining photo-Fenton pre-treatment time.

Effect of humic acids on photodegradation of chloroacetanilide herbicides under UV irradiation.

The effects of two humic acids (HAs) of different origins on the photodegradation of the chloroacetanilide herbicides acetochlor, propisochlor and butachlor were investigated in this study. One of the tested HAs was a standard sample that was purchased from a commercial source, and the other was isolated from the black soil of Northeast China. The photolysis of all three herbicides followed pseudo-first-order kinetics under ultraviolet (UV) irradiation conditions, regardless of whether HAs were present or not. Both HAs improved the photolysis rates of acetochlor in a dose-reversed way, whereas they inhibited butachlor degradation under all experimental concentrations. The two HAs differed in their effects on propisochlor photolysis, changing from enhancement to inhibition, depending on the origin and concentration of HAs. Element and Fourier Transform Infrared spectroscopy analyses showed that the isolated HAs had more polysaccharides and less aliphatic groups than the commercial HAs, and it was indicated that some characteristic radicals (C=O, O-H and phenolic hydroxyls) in HAs were involved in the photolysis of the herbicides. Gas chromatography/mass spectrometry (GC/MS) analyses indicated that the presence of HAs had no effects on the photolysis pathway and photoproduct species of the three herbicides.

Photochemical dehydration of acetamide in a cryogenic matrix.

Vacuum ultraviolet (VUV) irradiation of acetamide has been monitored by Fourier transform infrared spectroscopy in argon matrix at 10 K. Several primary photoproducts, including HNCO ratio CH(4) and CO ratio CH(3)NH(2) molecular complexes, and acetimidic acid, which is reported for the first time, were characterized. The acetimidic acid identification was based on comparison between the experimental and theoretical (B3LYP) infrared spectra. Acetimidic acid is found in argon matrix in the (s-Z)-(E) and (s-Z)-(Z) configurations. It is also an intermediate in the VUV decomposition process, its dehydration leads to the formation of CH(3)CN ratio H(2)O molecular complex. The assignment of the complex was achieved by co-depositing the pairs of respective species and by ab initio calculation.

Effect of ferric ion added on photodegradation of alachlor in the presence of TiO2 and UV radiation.

The effect of in situ photodeposited ferric ion onto TiO2 surface on the degradation of alachlor was investigated in the presence of the UV radiation. The photodegradation rate of alachlor could be described as an apparent first order. The rate constant (K(a)) of alachlor increased from 0.021 to 0.060 h(-1) as the number of coating times increased from 1- to 5-times in the absence of ferric ion, where the corresponding thicknesses of the TiO2 film were 67 and 174 nm. The rate constant (K(a)) increased from 0.030 to 0.060 h(-1) as pH value decreasd from pH 9 to 5 in the presence of only TiO2 immobilised with 5-times of coating. The rate constant increased slightly from 0.031 to 0.050 h(-1) as the concentration of ferric ion increased from 0.75 to 7.5 mg Fe3+ l(-1) in the absence of TiO2. However, those increased from 0.051 to 0.110 h(-1) in the presence of both TiO2 and ferric ion. In situ photodeposition of ferric ion onto the TiO2 surface enhanced the rate constant of photodegradation of alachlor by about 80% with an adding 7.5 mgFe3+ l(-1). During the alachlor photodegradation, three kinds of non-toxic organic compounds derived from alachlor were detected in 1 h.

High-performance liquid chromatographic mass spectrometric identification of the photoproducts of cymoxanil.

The photochemical degradation of the fungicide cymoxanil {2-cyano-N-[(ethylamino)carbonyl]-2-(methoxyimino) acetamide} was studied in aqueous buffer solution (pH 5.9+/- 0.1) under UV light and in laboratory conditions. The degradation followed a pseudo- first-order kinetic with significant correlation coefficient. The main photoproducts were separated and tentatively identified by HPLC/UV and HPLC/MS data, as 3-ethyl-4-(methoxyamino)-2,5-dioxo-4-imidazolidinecarbonitrile, 1-ethyl-5-(methoxyimino)-2,4-imidazolidin-2,4-dione, ethylimidazolidinetrione and {[(ethylamino)carbonyl]-amino}oxoacetic acid. A photolysis pathway of cymoxanil is proposed.

The hydrogen peroxide-assisted photocatalytic degradation of alachlor in TiO2 suspensions.

Photocatalytic degradations of alachlor in TiO2 suspensions with and without the use of hydrogen peroxide were studied using two different monochromatic UV irradiations (300 and 350 nm). Direct photolysis of alachlor was a rather slow process, but the addition of TiO2 enhanced the reaction rates by 12 and 26 times using 300 and 350 nm UV irradiation, respectively. The results showed that a low H2O2 dosage in photocatalysis using 300 nm UV would enhance the rates by 3.3 times, but an overdose of H2O2 will retard the rate due to the hydroxyl radicals are consumed. However, this process is impracticable at 350 nm due to the absorption characteristic of H2O2. A neutral initial pH level was found to favor the H2O2 assisted photocatalysis at 300 nm UV illumination. Eleven major intermediates were identified by liquid chromatography-electrospray ionization-mass spectrometry (LC-ESI-MS) and MS/MS. The major degradation mechanisms of H2O2-assisted alachlor photocatalysis include dechlorination, dealkylation, hydroxylation, cyclization, scission of C-O bond, and N-dealkylation. Bell-shaped evolution profiles of different intermediates were observed. Degradation pathways were proposed accordingly to illustrate series of degradation steps. The TOC analysis revealed the different stages of the reaction.

Alteration of protein structure induced by low-energy (<18 eV) electrons. I. The peptide and disulfide bridges.

We present measurements of low-energy (<18 eV) electron-stimulated desorption of anions from acetamide (CH(3)CONH(2)) and dimethyl disulfide [DMDS: (CH(3)S)(2)] films. Electron irradiation of physisorbed CH(3)CONH(2) produces H(-), CH(3)(-) and O(-) anions, whereas the H(-), CH(2)(-), CH(3)(-), S(-), SH(-) and SCH(3)(-) anions are observed to desorb from the DMDS film. Below 12 eV, the dependence of the anion yields on the incident electron energy exhibits structures that indicate that a resonant process (i.e. dissociative electron attachment) is responsible for molecular fragmentation. Within the range of 1-18 eV, it is found that (1.7 and 1.4) x 10(7) H(-) ions/incident electron and (7.8 x 10(-11) and 4.3 x 10(-8)) of the other ions/incident electron are desorbed from acetamide and DMDS films, respectively. These results suggest that, within proteins, the disulfide bond is more sensitive to low-energy electron attack than the peptide bond. In biological cells, some proteins interact closely with nucleic acid. Therefore, the observed fragments, when produced from secondary low-energy electrons generated by high-energy radiation, not only may denature proteins, but may also induce reactions with the nearby nucleic acid and damage DNA.