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1.
PLoS One ; 14(6): e0218801, 2019.
Artigo em Inglês | MEDLINE | ID: mdl-31251761

RESUMO

The Symbiodinaceae are paradoxical in that they play a fundamental role in the success of scleractinian corals, but also in their dismissal when under stress. In the past decades, the discovery of the endosymbiont's genetic and functional diversity has led people to hope that some coral species can survive bleaching events by associating with a stress-resistant symbiont that can become dominant when seawater temperatures increase. The variety of individual responses encouraged us to scrutinize each species individually to gauge its resilience to future changes. Here, we analyse the temporal variation in the Symbiodinaceae community associated with Leptoria phrygia, a common scleractinian coral from the Indo-Pacific. Coral colonies were sampled from two distant reef sites located in southern Taiwan that differ in temperature regimes, exemplifying a 'variable site' (VS) and a 'steady site' (SS). We investigated changes in the relative abundance of the dominant symbiont and its physiology every 3-4 months from 2016-2017. At VS, 11 of the 12 colonies were dominated by the stress-resistant Durusdinium spp. (>90% dominance) and only one colony exhibited co-dominance between Durusdinium spp. and Cladocopium spp. Every colony displayed high photochemical efficiency across all sampling periods, while showing temporal differences in symbiont density and chlorophyll a concentration. At SS, seven colonies out of 13 were dominated by Cladocopium spp., five presented co-dominance between Durusdinium spp./Cladocopium spp. and only one was dominated by Durusdinium spp. Colonies showed temporal differences in photochemical efficiency and chlorophyll a concentration during the study period. Our results suggest that VS colonies responded physiologically better to high temperature variability by associating with Durusdinium spp., while in SS there is still inter-colonial variability, a feature that might be advantageous for coping with different environmental changes.


Assuntos
Alveolados/classificação , Antozoários/parasitologia , Clorofila A/metabolismo , Aclimatação , Alveolados/química , Alveolados/isolamento & purificação , Animais , DNA de Protozoário/genética , Filogenia , Análise de Sequência de DNA , Simbiose , Taiwan , Temperatura
2.
mBio ; 9(5)2018 10 30.
Artigo em Inglês | MEDLINE | ID: mdl-30377285

RESUMO

Animals and amoebae assemble actin/spectrin-based plasma membrane skeletons, forming what is often called the cell cortex, whereas euglenids and alveolates (ciliates, dinoflagellates, and apicomplexans) have been shown to assemble a thin, viscoelastic, actin/spectrin-free membrane skeleton, here called the epiplast. Epiplasts include a class of proteins, here called the epiplastins, with a head/medial/tail domain organization, whose medial domains have been characterized in previous studies by their low-complexity amino acid composition. We have identified two additional features of the medial domains: a strong enrichment of acid/base amino acid dyads and a predicted ß-strand/random coil secondary structure. These features have served to identify members in two additional unicellular eukaryotic radiations-the glaucophytes and cryptophytes-as well as additional members in the alveolates and euglenids. We have analyzed the amino acid composition and domain structure of 219 epiplastin sequences and have used quick-freeze deep-etch electron microscopy to visualize the epiplasts of glaucophytes and cryptophytes. We define epiplastins as proteins encoded in organisms that assemble epiplasts, but epiplastin-like proteins, of unknown function, are also encoded in Insecta, Basidiomycetes, and Caulobacter genomes. We discuss the diverse cellular traits that are supported by epiplasts and propose evolutionary scenarios that are consonant with their distribution in extant eukaryotes.IMPORTANCE Membrane skeletons associate with the inner surface of the plasma membrane to provide support for the fragile lipid bilayer and an elastic framework for the cell itself. Several radiations, including animals, organize such skeletons using actin/spectrin proteins, but four major radiations of eukaryotic unicellular organisms, including disease-causing parasites such as Plasmodium, have been known to construct an alternative and essential skeleton (the epiplast) using a class of proteins that we term epiplastins. We have identified epiplastins in two additional radiations and present images of their epiplasts using electron microscopy. We analyze the sequences and secondary structure of 219 epiplastins and present an in-depth overview and analysis of their known and posited roles in cellular organization and parasite infection. An understanding of epiplast assembly may suggest therapeutic approaches to combat infectious agents such as Plasmodium as well as approaches to the engineering of useful viscoelastic biofilms.


Assuntos
Proteínas de Algas/química , Alveolados/química , Criptófitas/química , Euglênidos/química , Proteínas de Membrana/química , Proteínas de Protozoários/química , Alveolados/ultraestrutura , Aminoácidos/análise , Microscopia Crioeletrônica , Criptófitas/ultraestrutura , Euglênidos/ultraestrutura , Substâncias Macromoleculares/química , Substâncias Macromoleculares/ultraestrutura , Conformação Proteica , Domínios Proteicos , Multimerização Proteica
3.
Toxins (Basel) ; 10(11)2018 Nov 06.
Artigo em Inglês | MEDLINE | ID: mdl-30404158

RESUMO

The identification and quantification of okadaic acid (OA)/dinophysistoxin (DTX) analogues and pectenotoxins (PTXs) in Dinophysis samples collected from coastal locations around Japan were evaluated by liquid chromatography mass spectrometry. The species identified and analyzed included Dinophysis fortii, D. acuminata, D. mitra (Phalacroma mitra), D. norvegica, D. infundibulus, D. tripos, D. caudata, D. rotundata (Phalacroma rotundatum), and D. rudgei. The dominant toxin found in D. acuminata was PTX2 although some samples contained DTX1 as a minor toxin. D. acuminata specimens isolated from the southwestern regions (Takada and Hiroshima) showed characteristic toxin profiles, with only OA detected in samples collected from Takada. In contrast, both OA and DTX1, in addition to a larger proportion of PTX2, were detected in D. acuminata from Hiroshima. D. fortii showed a toxin profile dominated by PTX2 although this species had higher levels of DTX1 than D. acuminata. OA was detected as a minor toxin in some D. fortii samples collected from Yakumo, Noheji, and Hakata. PTX2 was also the dominant toxin found among other Dinophysis species analyzed, such as D. norvegica, D. tripos, and D. caudata, although some pooled picked cells of these species contained trace levels of OA or DTX1. The results obtained in this study re-confirm that cellular toxin content and profiles are different even among strains of the same species.


Assuntos
Alveolados/química , Organismos Aquáticos , Ácido Okadáico/análogos & derivados , Ácido Okadáico/toxicidade , Água do Mar/microbiologia , Cromatografia Líquida , Monitoramento Ambiental/métodos , Japão , Toxinas Marinhas/análise , Espectrometria de Massas em Tandem
4.
J Sep Sci ; 40(17): 3402-3413, 2017 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-28675643

RESUMO

The alveolate algae Chromera velia and Vitrella brassicaformis (chromerids) are the closest known phototrophic relatives to apicomplexan parasites. Apicomplexans are responsible for fatal diseases of humans and animals and severe economic losses. Availability of the genome sequences of chromerids together with easy and rapid culturing of C. velia makes this alga a suitable model for investigating elementary biochemical principals potentially important for the apicomplexan pathogenicity. Such knowledge allows us to better understand processes during the evolutionary transition from a phototrophy to the parasitism in Apicomplexa. We explored lipidomes of both algae using high-performance liquid chromatography with mass spectrometry or gas chromatography with flame ionization detection. A single high-performance liquid chromatography with mass spectrometry analysis in both ionization modes was sufficient for the separation and semi-quantification of lipids in chromerid algae. We detected more than 250 analytes belonging to five structural lipid classes, two lipid classes of precursors and intermediates, and triacylglycerols as storage lipids. Identification of suggested structures was confirmed by high-resolution mass spectrometry with an Orbitrap mass analyzer. An outstandingly high accumulation of storage triacylglycerols was found in both species. All the investigated aspects make C. velia a prospective organism for further applications in biotechnology.


Assuntos
Alveolados/química , Apicomplexa/química , Lipídeos/isolamento & purificação , Cromatografia Gasosa-Espectrometria de Massas
5.
Biochim Biophys Acta ; 1857(11): 1759-1765, 2016 11.
Artigo em Inglês | MEDLINE | ID: mdl-27544823

RESUMO

Resonance Raman spectroscopy was used to evaluate pigment structure in the FCP-like light-harvesting complex of Chromera velia (Chromera light-harvesting complex or CLH). This antenna protein contains chlorophyll a, violaxanthin and a new isofucoxanthin-like carotenoid (called Ifx-l). We show that Ifx-l is present in two non-equivalent binding pockets with different conformations, having their (0,0) absorption maxima at 515 and 548nm respectively. In this complex, only one violaxanthin population absorbing at 486nm is observed. All the CLH-bound carotenoid molecules are in all-trans configuration, and among the two Ifx-l carotenoid molecules, the red one is twisted, as is the red-absorbing lutein in LHCII trimers. Analysis of the carbonyl stretching region for Chl a excitations indicates CLH binds up to seven Chl a molecules in five non-equivalent binding sites, in reasonable agreement with sequence analyses which have identified eight potential coordinating residues. The binding modes and conformations of CLH-bound pigments are discussed with respect to the known structures of LHCII and FCP.


Assuntos
Alveolados/química , Complexos de Proteínas Captadores de Luz/química , Xantofilas/química , Alveolados/metabolismo , Sítios de Ligação , Complexos de Proteínas Captadores de Luz/metabolismo , Ligação Proteica , Xantofilas/metabolismo
6.
J Phys Chem B ; 119(39): 12653-63, 2015 Oct 01.
Artigo em Inglês | MEDLINE | ID: mdl-26362118

RESUMO

In order to estimate the possible structure of the unknown carbonyl carotenoid related to isofucoxanthin from Chromera velia denoted as isofucoxanthin-like carotenoid (Ifx-l), we employed steady-state and ultrafast time-resolved spectroscopic techniques to investigate spectroscopic properties of Ifx-l in various solvents. The results were compared with those measured for related carotenoids with known structure: fucoxanthin (Fx) and isofucoxanthin (Ifx). The experimental data were complemented by quantum chemistry calculations and molecular modeling. The data show that Ifx-l must have longer effective conjugation length than Ifx. Yet, the magnitude of polarity-dependent changes in Ifx-l is larger than for Ifx, suggesting significant differences in structure of these two carotenoids. The most interesting spectroscopic feature of Ifx-l is its response to solvent proticity. The transient absorption data show that (1) the magnitude of the ICT-like band of Ifx-l in acetonitrile is larger than in methanol and (2) the S1/ICT lifetime of Ifx-l in acetonitrile, 4 ps, is markedly shorter than in methanol (10 ps). This is opposite behavior than for Fx and Ifx whose S1/ICT lifetimes are always shorter in protic solvent methanol (20 and 13 ps) than in aprotic acetonitrile (30 and 17 ps). Comparison with other carbonyl carotenoids reported earlier showed that proticity response of Ifx-l is consistent with presence of a conjugated lactone ring. Combining the experimental data and quantum chemistry calculations, we estimated a possible structure of Ifx-l.


Assuntos
Alveolados/química , Carotenoides/química , Solventes/química
7.
Biochemistry ; 54(30): 4711-30, 2015 Aug 04.
Artigo em Inglês | MEDLINE | ID: mdl-26158802

RESUMO

Galectins are highly conserved lectins that are key to multiple biological functions, including pathogen recognition and regulation of immune responses. We previously reported that CvGal1, a galectin expressed in phagocytic cells (hemocytes) of the eastern oyster (Crassostrea virginica), is hijacked by the parasite Perkinsus marinus to enter the host, where it causes systemic infection and death. Screening of an oyster hemocyte cDNA library revealed a novel galectin, which we designated CvGal2, with four tandemly arrayed carbohydrate recognition domains (CRDs). Phylogentic analysis of the CvGal2 CRDs suggests close relationships with homologous CRDs from CvGal1. Glycan array analysis, however, revealed that, unlike CvGal1 which preferentially binds to the blood group A tetrasaccharide, CvGal2 recognizes both blood group A and B tetrasaccharides and related structures, suggesting that CvGal2 has broader binding specificity. Furthermore, SPR analysis demonstrated significant differences in the binding kinetics of CvGal1 and CvGal2, and structural modeling revealed substantial differences in their interactions with the oligosaccharide ligands. CvGal2 is homogeneously distributed in the hemocyte cytoplasm, is released to the extracellular space, and binds to the hemocyte surface. CvGal2 binds to P. marinus trophozoites in a dose-dependent and ß-galactoside-specific manner. Strikingly, negligible binding of CvGal2 was observed for Perkinsus chesapeaki, a sympatric parasite species mostly prevalent in the clams Mya arenaria and Macoma balthica. The differential recognition of Perkinsus species by the oyster galectins is consistent with their relative prevalence in oyster and clam species and supports their role in facilitating parasite entry and infectivity in a host-preferential manner.


Assuntos
Alveolados , Antígenos de Grupos Sanguíneos , Crassostrea , Galectinas , Oligossacarídeos , Filogenia , Alveolados/química , Alveolados/genética , Alveolados/metabolismo , Animais , Antígenos de Grupos Sanguíneos/química , Antígenos de Grupos Sanguíneos/genética , Antígenos de Grupos Sanguíneos/metabolismo , Crassostrea/química , Crassostrea/genética , Crassostrea/metabolismo , Crassostrea/parasitologia , Galectinas/química , Galectinas/genética , Galectinas/metabolismo , Hemócitos/química , Hemócitos/metabolismo , Hemócitos/parasitologia , Oligossacarídeos/química , Oligossacarídeos/genética , Oligossacarídeos/metabolismo
8.
BMC Res Notes ; 8: 18, 2015 Jan 24.
Artigo em Inglês | MEDLINE | ID: mdl-25616999

RESUMO

BACKGROUND: The actin cytoskeleton is a hallmark of eukaryotic cells. Its regulation as well as its interaction with other proteins is carefully orchestrated by actin interaction domains. One of the key players is the WH2 motif, which enables binding to actin monomers and filaments and is involved in the regulation of actin nucleation. Contrasting conserved domains, the identification of this motif in protein sequences is challenging, as it is short and poorly conserved. FINDINGS: To identify divergent members, we combined Hidden-Markov-Model (HMM) to HMM alignments with orthology predictions. Thereby, we identified nearly 500 proteins containing so far not annotated WH2 motifs. This included shootin-1, an actin binding protein involved in neuron polarization. Among others, WH2 motifs of 'proximal to raf' (ptr)-orthologs, which are described in the literature, but not annotated in genome databases, were identified. CONCLUSION: In summary, we increased the number of WH2 motif containing proteins substantially. This identification of candidate regions for actin interaction could steer their experimental characterization. Furthermore, the approach outlined here can easily be adapted to the identification of divergent members of further domain families.


Assuntos
Actinas/metabolismo , Proteínas de Drosophila/química , Proteínas dos Microfilamentos/química , Proteínas do Tecido Nervoso/química , Domínios e Motivos de Interação entre Proteínas , Alinhamento de Sequência/estatística & dados numéricos , Timosina/análogos & derivados , Ubiquitinas/química , Citoesqueleto de Actina/química , Citoesqueleto de Actina/metabolismo , Actinas/química , Alveolados/química , Alveolados/metabolismo , Motivos de Aminoácidos , Sequência de Aminoácidos , Animais , Proteínas de Drosophila/metabolismo , Drosophila melanogaster/química , Drosophila melanogaster/metabolismo , Euglenozoários/química , Euglenozoários/metabolismo , Fungos/química , Fungos/metabolismo , Camundongos , Proteínas dos Microfilamentos/metabolismo , Dados de Sequência Molecular , Proteínas do Tecido Nervoso/metabolismo , Ligação Proteica , Alinhamento de Sequência/métodos , Timosina/química , Timosina/metabolismo , Ubiquitinas/metabolismo
9.
J Chromatogr A ; 1373: 1-8, 2014 Dec 19.
Artigo em Inglês | MEDLINE | ID: mdl-25464996

RESUMO

In the present study, okadaic acid (OA) and dinophysistoxin-1 (DTX1) were spiked into artificial seawater at low, medium and high estuarine salinities (9‰, 13.5‰ and 27‰). Passive samplers (HP20 resin) used for solid phase adsorption toxin tracking (SPATT) technology were exposed in these seawaters for 12-h periods. Adsorption curves well fitted a pseudo-secondary kinetics model. The highest initial sorption rates of both toxins occurred in the seawater of medium salinity, followed by seawater of low and high estuarine salinity. Pore volumes of micropores (<2 nm) and small mesopores (2 nm

Assuntos
Alveolados/química , Cromatografia Líquida de Alta Pressão/instrumentação , Ácido Okadáico/análise , Poliestirenos/química , Piranos/análise , Salinidade , Água do Mar/química , Adsorção , Cromatografia Líquida de Alta Pressão/métodos , Ácido Okadáico/química , Porosidade , Piranos/química
10.
Appl Microbiol Biotechnol ; 98(10): 4637-52, 2014 May.
Artigo em Inglês | MEDLINE | ID: mdl-24682476

RESUMO

Alexandrium tamarense is a notorious harmful algal bloom species, which is associated with the largest number of paralytic shellfish poisoning cases, causing devastating economic losses and health hazards. The marine bacterium Mangrovimonas yunxiaonensis strain LY01 showed high algicidal effects on A. tamarense. A. tamarense was also susceptible to the supernatant of LY01 as revealed by algicidal activity assay, but washed bacterial cells did not show algicidal activity towards A. tamarense. In this study, we investigated the algicidal effect of the supernatant on growth, photosynthesis and the antioxidative response of A. tamarense. The results indicated that under the algicidal effect of the supernatant, the contents of cellular pigments including chlorophyll a and carotenoids were significantly decreased, and the decline of the maximum quantum yield and relative electron transport rate values suggested that photosynthetic inhibition occurred in the photosystem II system. The content of reactive oxygen species (ROS) increased after 0.5 h exposure, and the surplus ROS induced lipid peroxidation, the destruction of cellular membrane integrity and decreased cellular protein and carbohydrate contents in the algal cells. At the same time, the supernatant also induced the responses of antioxidant enzymes and non-enzymatic antioxidant. The transcription of photosynthesis- and respiration-related genes were significantly inhibited during the exposure procedure, which obstructed photosynthetic efficiency and capacity and disturbed the respiratory system, thereby increasing ROS production again. All these results elaborate clearly the entire procedure by which cellular physiological levels respond to the algicidal bacterium and may contribute to a better understanding of the bacterial control of A. tamarense.


Assuntos
Alveolados/efeitos dos fármacos , Alveolados/fisiologia , Antibiose , Citotoxinas/metabolismo , Flavobacteriaceae/fisiologia , Estresse Oxidativo , Fotossíntese/efeitos dos fármacos , Alveolados/química , Organismos Aquáticos/química , Organismos Aquáticos/efeitos dos fármacos , Organismos Aquáticos/metabolismo , Organismos Aquáticos/fisiologia , Carboidratos/análise , Carotenoides/análise , Sobrevivência Celular/efeitos dos fármacos , Clorofila/análise , Clorofila A , Flavobacteriaceae/metabolismo , Peroxidação de Lipídeos , Redes e Vias Metabólicas/efeitos dos fármacos , Proteínas de Protozoários/análise , Espécies Reativas de Oxigênio/análise
11.
Genome Biol Evol ; 5(8): 1567-83, 2013.
Artigo em Inglês | MEDLINE | ID: mdl-23887922

RESUMO

Vaults are very large oligomeric ribonucleoproteins conserved among a variety of species. The rat vault 3D structure shows an ovoid oligomeric particle, consisting of 78 major vault protein monomers, each of approximately 861 amino acids. Vaults are probably the largest ribonucleoprotein structures in eukaryote cells, being approximately 70 nm in length with a diameter of 40 nm--the size of three ribosomes and with a lumen capacity of 50 million Å(3). We use both protein sequences and inferred ancestral sequences for in silico virtual resurrection of tertiary and quaternary structures to search for vaults in a wide variety of eukaryotes. We find that the vault's phylogenetic distribution is widespread in eukaryotes, but is apparently absent in some notable model organisms. Our conclusion from the distribution of vaults is that they were present in the last eukaryote common ancestor but they have apparently been lost from a number of groups including fungi, insects, and probably plants. Our approach of inferring ancestral 3D and quaternary structures is expected to be useful generally.


Assuntos
Simulação por Computador , Eucariotos/genética , Filogenia , Partículas de Ribonucleoproteínas em Forma de Abóbada/química , Alveolados/química , Sequência de Aminoácidos , Amebozoários/química , Animais , Proteínas de Bactérias/química , Coanoflagelados/química , Eucariotos/química , Fungos/química , Genes de Plantas , Modelos Moleculares , Dados de Sequência Molecular , Proteínas de Plantas/química , Estrutura Quaternária de Proteína , Estrutura Terciária de Proteína , Ratos , Alinhamento de Sequência , Partículas de Ribonucleoproteínas em Forma de Abóbada/genética
12.
mBio ; 4(3): e00052-13, 2013 May 14.
Artigo em Inglês | MEDLINE | ID: mdl-23674611

RESUMO

UNLABELLED: Metabolic interactions with endosymbiotic photosynthetic dinoflagellate Symbiodinium spp. are fundamental to reef-building corals (Scleractinia) thriving in nutrient-poor tropical seas. Yet, detailed understanding at the single-cell level of nutrient assimilation, translocation, and utilization within this fundamental symbiosis is lacking. Using pulse-chase (15)N labeling and quantitative ion microprobe isotopic imaging (NanoSIMS; nanoscale secondary-ion mass spectrometry), we visualized these dynamic processes in tissues of the symbiotic coral Pocillopora damicornis at the subcellular level. Assimilation of ammonium, nitrate, and aspartic acid resulted in rapid incorporation of nitrogen into uric acid crystals (after ~45 min), forming temporary N storage sites within the dinoflagellate endosymbionts. Subsequent intracellular remobilization of this metabolite was accompanied by translocation of nitrogenous compounds to the coral host, starting at ~6 h. Within the coral tissue, nitrogen is utilized in specific cellular compartments in all four epithelia, including mucus chambers, Golgi bodies, and vesicles in calicoblastic cells. Our study shows how nitrogen-limited symbiotic corals take advantage of sudden changes in nitrogen availability; this opens new perspectives for functional studies of nutrient storage and remobilization in microbial symbioses in changing reef environments. IMPORTANCE: The methodology applied, combining transmission electron microscopy with nanoscale secondary-ion mass spectrometry (NanoSIMS) imaging of coral tissue labeled with stable isotope tracers, allows quantification and submicrometric localization of metabolic fluxes in an intact symbiosis. This study opens the way for investigations of physiological adaptations of symbiotic systems to nutrient availability and for increasing knowledge of global nitrogen and carbon biogeochemical cycling.


Assuntos
Alveolados/fisiologia , Antozoários/fisiologia , Antozoários/parasitologia , Nitrogênio/metabolismo , Simbiose , Alveolados/química , Alveolados/metabolismo , Animais , Antozoários/química , Marcação por Isótopo , Compostos de Nitrogênio/metabolismo , Isótopos de Nitrogênio/metabolismo , Organelas/química , Espectrometria de Massa de Íon Secundário
13.
J Microbiol ; 51(1): 136-9, 2013 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-23456723

RESUMO

Toxic effects of the herbicide metolachlor (MC) were evaluated for three marine microalgae, Tetraselmis suecica (chlorophyte), Ditylum brightwellii (diatom), and Prorocentrum minimum (dinoflagellate). MC showed a significant reduction in cell counts and chlorophyll a levels. Median effective concentration (EC50) was calculated based on chlorophyll a levels after a 72-h MC exposure. EC50 values for T. suecica, D. brightwellii, and P. minimum were 21.3, 0.423, and 0.07 mg/L, respectively. These values showed that the dinoflagellate was most sensitive when exposed to the herbicide, at a concentration comparable to freshwater algae, suggesting its potential as an appropriate model organism for ecotoxicity assessments in marine environments.


Assuntos
Acetamidas/toxicidade , Alveolados/efeitos dos fármacos , Clorófitas/efeitos dos fármacos , Diatomáceas/efeitos dos fármacos , Herbicidas/toxicidade , Alveolados/química , Alveolados/fisiologia , Organismos Aquáticos/efeitos dos fármacos , Contagem de Células , Clorofila/análise , Clorofila A , Clorófitas/química , Clorófitas/fisiologia , Diatomáceas/química , Diatomáceas/fisiologia
15.
Protist ; 164(2): 183-94, 2013 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-22951212

RESUMO

A neutral lipid fraction obtained from two strains of the permanently sheathed dinoflagellate, Pyrocystis lunula, was found to contain three polyunsaturated C27 hydrocarbons as abundant lipid components. A combination of mass spectrometry techniques was used to identify these compounds as n-heptacosa-3,6,9,12,15,18-hexaene (C27:6), approx. 0.7 ng/sheathed cell), n-heptacosa-3,6,9,12,15,18,21-heptaene (C27:7), approx. 2 ng/sheathed cell), and n-heptacosa-3,6,9,12,15,18,21,24-octaene (C27:8), approx. 2 ng/sheathed cell). Polyunsaturated C21, C23, and C25 hydrocarbons were also found at lesser amounts of approximately 0.2-0.5 ng/sheathed cell. Fluorescent microscopy revealed Nile red staining in both the vegetative cell and structures within the outer sheath surrounding the cell. These hydrocarbons were not present in two other species of Pyrocystis, P. fusiformis and P. noctiluca. Although their function(s) is not known, previous studies have shown and hypothesized that similar hydrocarbons function in carbon storage, buoyancy regulation, or signaling.


Assuntos
Alveolados/química , Fosfolipídeos/análise , Cromatografia Gasosa-Espectrometria de Massas , Microscopia de Fluorescência , Estrutura Molecular , Oxazinas/metabolismo , Coloração e Rotulagem
16.
PLoS Pathog ; 8(9): e1002948, 2012 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-23028336

RESUMO

Protein phosphorylation and dephosphorylation (catalysed by kinases and phosphatases, respectively) are post-translational modifications that play key roles in many eukaryotic signalling pathways, and are often deregulated in a number of pathological conditions in humans. In the malaria parasite Plasmodium, functional insights into its kinome have only recently been achieved, with over half being essential for blood stage development and another 14 kinases being essential for sexual development and mosquito transmission. However, functions for any of the plasmodial protein phosphatases are unknown. Here, we use reverse genetics in the rodent malaria model, Plasmodium berghei, to examine the role of a unique protein phosphatase containing kelch-like domains (termed PPKL) from a family related to Arabidopsis BSU1. Phylogenetic analysis confirmed that the family of BSU1-like proteins including PPKL is encoded in the genomes of land plants, green algae and alveolates, but not in other eukaryotic lineages. Furthermore, PPKL was observed in a distinct family, separate to the most closely-related phosphatase family, PP1. In our genetic approach, C-terminal GFP fusion with PPKL showed an active protein phosphatase preferentially expressed in female gametocytes and ookinetes. Deletion of the endogenous ppkl gene caused abnormal ookinete development and differentiation, and dissociated apical microtubules from the inner-membrane complex, generating an immotile phenotype and failure to invade the mosquito mid-gut epithelium. These observations were substantiated by changes in localisation of cytoskeletal tubulin and actin, and the micronemal protein CTRP in the knockout mutant as assessed by indirect immunofluorescence. Finally, increased mRNA expression of dozi, a RNA helicase vital to zygote development was observed in ppkl(-) mutants, with global phosphorylation studies of ookinete differentiation from 1.5-24 h post-fertilisation indicating major changes in the first hours of zygote development. Our work demonstrates a stage-specific essentiality of the unique PPKL enzyme, which modulates parasite differentiation, motility and transmission.


Assuntos
Fosfoproteínas Fosfatases/química , Fosfoproteínas Fosfatases/metabolismo , Plasmodium berghei/enzimologia , Plasmodium berghei/crescimento & desenvolvimento , Proteínas de Protozoários/química , Proteínas de Protozoários/metabolismo , Alveolados/química , Alveolados/genética , Motivos de Aminoácidos , Animais , Anopheles/parasitologia , Arabidopsis/metabolismo , Proteínas de Arabidopsis/genética , Sequência de Bases , Diferenciação Celular , Genes de Protozoários , Malária/parasitologia , Camundongos , Camundongos Endogâmicos C57BL , Fosfoproteínas Fosfatases/genética , Plasmodium berghei/genética , Plasmodium berghei/metabolismo , Proteínas de Protozoários/genética , Análise de Sequência de DNA , Viridiplantae/química
17.
Biol Bull ; 223(1): 44-65, 2012 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-22983032

RESUMO

The symbiotic associations between cnidarians and dinoflagellate algae (Symbiodinium) support productive and diverse ecosystems in coral reefs. Many aspects of this association, including the mechanistic basis of host-symbiont recognition and metabolic interaction, remain poorly understood. The first completed genome sequence for a symbiotic anthozoan is now available (the coral Acropora digitifera), and extensive expressed sequence tag resources are available for a variety of other symbiotic corals and anemones. These resources make it possible to profile gene expression, protein abundance, and protein localization associated with the symbiotic state. Here we review the history of "omics" studies of cnidarian-algal symbiosis and the current availability of sequence resources for corals and anemones, identifying genes putatively involved in symbiosis across 10 anthozoan species. The public availability of candidate symbiosis-associated genes leaves the field of cnidarian-algal symbiosis poised for in-depth comparative studies of sequence diversity and gene expression and for targeted functional studies of genes associated with symbiosis. Reviewing the progress to date suggests directions for future investigations of cnidarian-algal symbiosis that include (i) sequencing of Symbiodinium, (ii) proteomic analysis of the symbiosome membrane complex, (iii) glycomic analysis of Symbiodinium cell surfaces, and (iv) expression profiling of the gastrodermal cells hosting Symbiodinium.


Assuntos
Alveolados/fisiologia , Cnidários/microbiologia , Genômica/métodos , Metabolômica/métodos , Proteômica/métodos , Simbiose , Alveolados/química , Alveolados/genética , Animais , Genômica/tendências , Metabolômica/tendências , Proteômica/tendências
18.
Anal Chem ; 84(14): 5976-83, 2012 Jul 17.
Artigo em Inglês | MEDLINE | ID: mdl-22816781

RESUMO

The collision-induced dissociation (CID) of a range of deprotonated fatty acid standards was studied using linear ion trap mass spectrometry. Neutral losses of 78, 98, and 136 Da were consistently observed for fatty acids with five or more double bonds. Comparison of the MS/MS spectra of docosahexaenoic acid (DHA) and universally (13)C-labeled DHA allowed the molecular formulas for these neutral losses to be determined as C(6)H(6), C(5)H(6)O(2), and C(8)H(8)O(2). Knowledge of fatty acid fragmentation processes was then applied to identify fatty acids from a sea anemone, Aiptasia pulchella, and dinoflagellate symbiont, Symbiodinium sp. extract. Using HPLC-MS, fatty acids were separated and analyzed by tandem mass spectrometry in data-dependent acquisition mode. Neutral loss chromatograms for 78, 98, and 136 Da allowed the identification of long-chain fatty acids with five or more double bonds. On the basis of precursor ion m/z ratios, chain length and degree of unsaturation for these fatty acids were determined. The application of this technique to an Aiptasia sp.-Symbiodinium sp. lipid extract enabled the identification of the unusual, long-chain fatty acids 24:6, 26:6, 26:7, 28:7, and 28:8 during a single 40 min HPLC-MS analysis.


Assuntos
Alveolados/química , Cromatografia Líquida de Alta Pressão/métodos , Ácidos Docosa-Hexaenoicos/análise , Ácidos Docosa-Hexaenoicos/química , Espectrometria de Massas/métodos , Anêmonas-do-Mar/química , Animais , Fatores de Tempo
19.
Biotechnol Bioeng ; 109(8): 2005-16, 2012 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-22354618

RESUMO

We have used phosphate, nitrogen, or carbon limited batch and continuous flow cultures to study how growth and biochemical composition of the dinoflagellate Crypthecodinium cohnii CCMP 316 is affected by nutrient limitation. Specific contents of phosphorous, proteins, and starch were differently affected by nutrient limitation. The specific phosphorous content in C. cohnii varied 10-20 times depending on phosphate availability in the medium. When phosphate was available it was taken up in excess and stored to be re-utilized during phosphate limitation. The specific protein content varied twofold. At most conditions, proteins made up 12-15% of the biomass dry weight but when cells were nitrogen limited, the specific protein content was only half this value. Floridean starch was the major cell constituent of C. cohnii accounting for 40-50% of the biomass dry weight. Only during carbon limitation did the specific starch content decrease. In contrast was the specific lipid content almost unaffected by nutrient availability and lipids accounted for 12-15% of the biomass dry weight irrespectively of which nutrient that was limiting. Lipid production does therefore not depend on nutrient limitation in C. cohnii and lipids are produced even by carbon limited cells. Cultures grown under phosphate limitation resulted in formation of cells with maximal specific contents of all the three major cell constituents; starch, lipid, and protein.


Assuntos
Alveolados/crescimento & desenvolvimento , Alveolados/metabolismo , Biomassa , Carbono/metabolismo , Meios de Cultura/química , Nitrogênio/metabolismo , Fósforo/metabolismo , Alveolados/química , Fosfatos/análise , Proteínas de Protozoários/análise , Amido/análise
20.
J Am Soc Mass Spectrom ; 23(5): 952-63, 2012 May.
Artigo em Inglês | MEDLINE | ID: mdl-22354684

RESUMO

Palytoxin is a potent marine toxin and one of the most complex natural compounds ever described. A number of compounds identified as palytoxin congeners (e.g., ovatoxins, mascarenotoxins, ostreocins, etc.) have not been yet structurally elucidated due to lack of pure material in quantities sufficient to an NMR-based structural investigation. In this study, the complex fragmentation pattern of palytoxin in its positive high resolution liquid chromatography tandem mass spectra (HR LC-MS(n)) was interpreted. Under the used conditions, the molecule underwent fragmentation at many sites of its backbone, and a large number of diagnostic fragment ions were identified. The natural product itself was used with no need for derivatization. Interestingly, most of the fragments contained calcium in their elemental formula. Evidence for palytoxin tendency to form adduct ions with calcium and other divalent cations in its mass spectra was obtained. Fragmentation pattern of palytoxin was used as template to gain detailed structural information on ovatoxin-a, the main toxin produced by Ostreopsis ovata, (observe correct font) a benthic dinoflagellate that currently represents the major harmful algal bloom threat in the Mediterranean area. Either the regions or the specific sites where ovatoxin-a and palytoxin structurally differ have been identified.


Assuntos
Acrilamidas/química , Cálcio/química , Cromatografia Líquida/métodos , Toxinas Marinhas/química , Espectrometria de Massas/métodos , Alveolados/química , Cátions/química , Venenos de Cnidários , Modelos Moleculares
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