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1.
J Agric Food Chem ; 70(44): 14247-14254, 2022 Nov 09.
Artigo em Inglês | MEDLINE | ID: mdl-36302508

RESUMO

l-Aspartate is an important chemical in the food and pharmaceutical industries. Herein, a dual-enzyme system was constructed to synthesize l-aspartate from maleic anhydride at 50 °C, which can reduce the byproduct production. Maleate transformed from maleic anhydride in the solution was converted into l-aspartate via fumarate catalyzed by maleate isomerase (MaiA) and thermostable aspartase (AspB), respectively. Because MaiA is a rate-limiting enzyme, enzyme activities of various MaiAs were compared, and the efficient and thermostable maleate isomerase AaMaiA from Alicyclobacillus acidoterrestris was chosen. The Kcat/Km value of AaMaiA was 264.4 mM-1 min-1. AaMaiA and AspB were coexpressed in E. coli to produce l-aspartate. To improve the l-aspartate production rate, the ribosome binding site (RBS) sequence located upstream of AaMaiA was optimized and the Tat signal peptide was fused with AaMaiA. The conversion rate was 96% within 60 min, and the intermediate was not detected, the possible reason of which is that high temperature inhibits the activity of bacterial endogenous enzymes, but functional enzymes remain active. Cells from fermentation produced 243.6 g/L (1.83 M) of l-aspartate with a 2 M substrate. Our study revealed an effective method to produce l-aspartate without using gene knockout and provided a strategy for l-aspartate production in the industrial field.


Assuntos
Aspartato Amônia-Liase , Ácido Aspártico , Anidridos Maleicos/metabolismo , Escherichia coli/metabolismo , Temperatura , Sequência de Aminoácidos , Aspartato Amônia-Liase/química , Aspartato Amônia-Liase/genética , Aspartato Amônia-Liase/metabolismo
2.
Microbiol Spectr ; 10(5): e0132222, 2022 10 26.
Artigo em Inglês | MEDLINE | ID: mdl-36036634

RESUMO

The development of efficient, low-cost, and robust expression systems is important for the mass production of proteins and natural products in large amounts using cell factories. Glycerol is an ideal carbon source for large-scale fermentation due to its low cost and favorable maintenance of the fermentation process. Here, we used the antiterminator protein GlpP and its target promoter PglpD to construct a highly efficient glycerol-inducible expression system (GIES) in Bacillus subtilis. This system was able to express heterologous genes in an autoinducible manner based on the sequential utilization of glucose and glycerol under the regulation of carbon catabolite repression. In such a system, the concentration of glycerol regulated the strength of gene expression, and the concentration of glucose affected both the timing of induction and the strength of gene expression. By enhancing GlpP, the GIES was further strengthened for high-level intracellular expression of aspartase and secretory expression of nattokinase. High yields of nattokinase in a 5-L fermenter through batch and fed-batch fermentation demonstrated the potential to apply the GIES for large-scale enzyme production. Through the evolution of the -10 box of PglpD, mutants with gradient activities were obtained. In addition, hybrid glycerol-inducible promoters were successfully constructed by combining the constitutive promoters and the 5' untranslated region of PglpD. Collectively, this study developed a GIES to obtain high-value products from inexpensive glycerol. More importantly, the great potential of the pair of inherent terminator and antiterminator protein as a portable biological tool for various purposes in synthetic biology is proposed. IMPORTANCE In this study, a GIES was constructed in B. subtilis by employing the antiterminator protein GlpP and the GlpP-regulated promoter PglpD. Based on the sequential utilization of glucose and glycerol by B. subtilis, the GIES was able to express genes in an autoinducible manner. The amounts and ratio of glucose and glycerol can regulate the gene induction timing and expression strength. The GIES was further applied for high yields of nattokinase, and its robustness in production scale-up was confirmed in a 5-L fermenter. The high-level expression of heterologous proteins demonstrated the huge application potential of the GIES. Furthermore, mutants of PglpD with gradient activities and hybrid glycerol-inducible promoters were obtained through the evolution of the -10 box of PglpD and the combination of the constitutive promoters and the 5' untranslated region of PglpD, respectively. These results demonstrated the use of the antiterminator protein as a regulator for various purposes in synthetic biology.


Assuntos
Aspartato Amônia-Liase , Produtos Biológicos , Bacillus subtilis/genética , Bacillus subtilis/metabolismo , Glicerol/metabolismo , Regulação Bacteriana da Expressão Gênica , Aspartato Amônia-Liase/genética , Aspartato Amônia-Liase/metabolismo , Regiões 5' não Traduzidas , Glucose/metabolismo , Glucose/farmacologia , Carbono/metabolismo
3.
Chembiochem ; 23(7): e202100708, 2022 04 05.
Artigo em Inglês | MEDLINE | ID: mdl-35114050

RESUMO

Aspartate ammonia-lyases (AALs) catalyze the non-oxidative elimination of ammonia from l-aspartate to give fumarate and ammonia. In this work the AAL coding gene from Pseudomonas fluorescens R124 was identified, isolated, and cloned into the pET-15b expression vector and expressed in E. coli. The purified enzyme (PfAAL) showed optimal activity at pH 8.8, Michaelis-Menten kinetics in the ammonia elimination from l-aspartate, and no strong dependence on divalent metal ions for its activity. The purified PfAAL was covalently immobilized on epoxy-functionalized magnetic nanoparticles (MNP), and effective kinetics of the immobilized PfAAL-MNP was compared to the native solution form. Glycerol addition significantly enhanced the storability of PfAAL-MNP. Inhibiting effect of the growing viscosity (modulated by addition of glycerol or glucose) on the enzymatic activity was observed for the native and immobilized form of PfAAL, as previously described for other free enzymes. The storage stability and recyclability of PfAAL-MNP is promising for further biocatalytic applications.


Assuntos
Aspartato Amônia-Liase , Nanopartículas de Magnetita , Pseudomonas fluorescens , Aspartato Amônia-Liase/genética , Aspartato Amônia-Liase/metabolismo , Enzimas Imobilizadas/metabolismo , Escherichia coli/metabolismo , Concentração de Íons de Hidrogênio , Cinética , Nanopartículas de Magnetita/química
4.
BMC Microbiol ; 20(1): 369, 2020 12 03.
Artigo em Inglês | MEDLINE | ID: mdl-33272193

RESUMO

BACKGROUND: Pasteurella multocida is responsible for a highly infectious and contagious disease in birds, leading to heavy economic losses in the chicken industry. However, the pathogenesis of this disease is poorly understood. We recently identified an aspartate ammonia-lyase (aspA) in P. multocida that was significantly upregulated under iron-restricted conditions, the protein of which could effectively protect chicken flocks against P. multocida. However, the functions of this gene remain unclear. In the present study, we constructed aspA mutant strain △aspA::kan and complementary strain C△aspA::kan to investigate the function of aspA in detail. RESULT: Deletion of the aspA gene in P. multocida resulted in a significant reduction in bacterial growth in LB (Luria-Bertani) and MH (Mueller-Hinton) media, which was rescued by supplementation with 20 mM fumarate. The mutant strain △aspA::kan showed significantly growth defects in anaerobic conditions and acid medium, compared with the wild-type strain. Moreover, growth of △aspA::kan was more seriously impaired than that of the wild-type strain under iron-restricted conditions, and this growth recovered after supplementation with iron ions. AspA transcription was negatively regulated by iron conditions, as demonstrated by quantitative reverse transcription-polymerase chain reaction. Although competitive index assay showed the wild-type strain outcompetes the aspA mutant strain and △aspA::kan was significantly more efficient at producing biofilms than the wild-type strain, there was no significant difference in virulence between the mutant and the wild-type strains. CONCLUSION: These results demonstrate that aspA is required for bacterial growth in complex medium, and under anaerobic, acid, and iron-limited conditions.


Assuntos
Aspartato Amônia-Liase/metabolismo , Proteínas de Bactérias/metabolismo , Pasteurella multocida/enzimologia , Ácidos/metabolismo , Anaerobiose , Animais , Aspartato Amônia-Liase/genética , Proteínas de Bactérias/genética , Biofilmes/crescimento & desenvolvimento , Galinhas , Fumaratos/metabolismo , Ferro/metabolismo , Mutação , Infecções por Pasteurella/microbiologia , Infecções por Pasteurella/veterinária , Pasteurella multocida/crescimento & desenvolvimento
5.
Int J Biol Macromol ; 164: 4165-4172, 2020 Dec 01.
Artigo em Inglês | MEDLINE | ID: mdl-32888990

RESUMO

ß-Aminobutyric acid (BABA) can be widely used in the preparation of anti-tumor drugs, AIDS drugs, penicillin antibiotics, and plant initiators. However, the efficient, economical, and environmentally friendly production of BABA still faces challenges. Its important production enzyme, aspartase, catalyzes the substrate crotonic acid, and depends on harsh conditions, such as high temperatures and the presence of strong alkali. Here, we modified the surface charge of the enzyme to enable it to become more negatively charged (K19E, N87E, N125D, S133D, Q262E, and N451E; from -60 to -80), reducing its optimal pH from 9.0 to 8.0. The M20 enzyme showed improved specific activity (400.21 mU/mg at pH 8.0; 2.47-fold that of aspartase), and at pH 7.0, its activity increased 3-fold. The thermal stability of the enzyme was also improved. For the production of BABA, a 500 g/L whole-cell transformation was obtained with a 1.41-fold increase in yield, and the final production of BABA reached 556.1 g/L within 12 h. Our method provides a new strategy for modifying the characteristics of the enzyme through the modification of its surface charge, which also represents the first modification of the optimal pH for aspartase.


Assuntos
Aminobutiratos/síntese química , Aspartato Amônia-Liase/química , Concentração de Íons de Hidrogênio , Engenharia de Proteínas , Eletricidade Estática , Aspartato Amônia-Liase/genética , Sítios de Ligação , Estabilidade Enzimática , Cinética , Simulação de Dinâmica Molecular , Mutagênese Sítio-Dirigida , Ligação Proteica , Conformação Proteica , Proteínas Recombinantes , Relação Estrutura-Atividade , Propriedades de Superfície
6.
ACS Synth Biol ; 9(5): 1150-1159, 2020 05 15.
Artigo em Inglês | MEDLINE | ID: mdl-32243749

RESUMO

Acrylic acid (AA) is an important industrial chemical used for several applications including superabsorbent polymers and acrylate esters. Here, we report the development of a new biosynthetic pathway for the production of AA from glucose in metabolically engineered Escherichia coli through the ß-alanine (BA) route. The AA production pathway was partitioned into two modules: an AA forming downstream pathway and a BA forming upstream pathway. We first validated the operation of the downstream pathway in vitro and in vivo, and then constructed the downstream pathway by introducing efficient enzymes (Act, Acl2, and YciA) screened out of various microbial sources and optimizing the expression levels. For the direct fermentative production of AA from glucose, the downstream pathway was introduced into the BA producing E. coli strain. The resulting strain could successfully produce AA from glucose in flask cultivation. AA production was further enhanced by expressing the upstream genes (panD and aspA) under the constitutive BBa_J23100 promoter. Replacement of the native promoter of the acs gene with the BBa_J23100 promoter in the genome increased AA production to 55.7 mg/L in flask. Fed-batch fermentation of the final engineered strain allowed production of 237 mg/L of AA in 57.5 h, representing the highest AA titer reported to date.


Assuntos
Acrilatos/metabolismo , Vias Biossintéticas/genética , Escherichia coli/metabolismo , Engenharia Metabólica/métodos , beta-Alanina/metabolismo , Acrilatos/química , Aspartato Amônia-Liase/genética , Carboxiliases/genética , Escherichia coli/genética , Glucose/metabolismo , Plasmídeos/genética , Plasmídeos/metabolismo , Serina Endopeptidases/genética
8.
Oncogene ; 35(26): 3351-64, 2016 06 30.
Artigo em Inglês | MEDLINE | ID: mdl-26657154

RESUMO

Proteolysis is not only a critical requirement for life, but the executing enzymes also play important roles in numerous pathological conditions, including cancer. Therefore, targeting proteases is clearly relevant for improving cancer patient care. However, to effectively control proteases, a profound knowledge of their mechanistic function as well as their regulation and downstream signalling in health and disease is required. The highly conserved protease Threonine Aspartase1 (Taspase1) is overexpressed in numerous liquid and solid malignancies and was characterized as a 'non-oncogene addiction' protease. Although Taspase1 was shown to cleave various regulatory proteins in humans as well as leukaemia provoking mixed lineage leukaemia fusions, our knowledge on its detailed functions and the underlying mechanisms contributing to cancer is still incomplete. Despite superficial similarity to type 2 asparaginases as well as Ntn proteases, such as the proteasome, Taspase1-related research so far gives us the picture of a unique protease exhibiting special features. Moreover, neither effective genetic nor chemical inhibitors for this enzyme are available so far, thus hampering not only to further dissect Taspase1's pathobiological functions but also precluding the assessment of its clinical impact. Based on recent insights, we here critically review the current knowledge of Taspase1's structure-function relationship and its mechanistic relevance for tumorigenesis obtained from in vitro and in vivo cancer models. We provide a comprehensive overview of tumour entities for which Taspase1 might be of predictive and therapeutic value, and present the respective experimental evidence. To stimulate progress in the field, a comprehensive overview of Taspase1 targeting approaches is presented, including coverage of Taspase1-related patents. We conclude by discussing future inhibition strategies and relevant challenges, which need to be resolved by the field.


Assuntos
Aspartato Amônia-Liase/metabolismo , Endopeptidases/metabolismo , Neoplasias/enzimologia , Treonina/metabolismo , Pesquisa Translacional Biomédica/métodos , Aspartato Amônia-Liase/antagonistas & inibidores , Aspartato Amônia-Liase/genética , Endopeptidases/genética , Inibidores Enzimáticos/química , Inibidores Enzimáticos/uso terapêutico , Regulação Enzimológica da Expressão Gênica/efeitos dos fármacos , Regulação Neoplásica da Expressão Gênica/efeitos dos fármacos , Humanos , Estrutura Molecular , Neoplasias/genética , Neoplasias/prevenção & controle
9.
Bioresour Technol ; 145: 217-23, 2013 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-23219690

RESUMO

Aspartase gene (aspA) from Aeromonas media NFB-5 was cloned and expressed in Escherichia coli BL21 using pET21b(+) expression vector. Maximum production of aspartase was obtained at shake-flask after 5 h of IPTG (1.5 mM) induction at 37°C and by supplementing the media with KH2PO4 (0.3%, w/v) and K2HPO4 (0.3%, w/v). Further production was investigated at a laboratory scale stirred tank reactor using response surface methodology (RSM). Agitation (130-270 rpm), aeration (0.30-1.70 vvm) and IPTG induction time (3-7 h) was optimized. Optimal levels of agitation (250 rpm), aeration (1.25 vvm) and induction time (6h) were determined by statistical analysis of the experimental data. More than 7-fold increase in recombinant aspartase (1234 U/g wet weight) was observed than the parent strain (172 U/g wet wt). Homogenized immobilized permeabilized recombinant cells (566 mg/g wet cells) produced more L-aspartic acid as compared to permeabilized recombinant free cells (154 mg/g wet cells).


Assuntos
Aeromonas/enzimologia , Aspartato Amônia-Liase/biossíntese , Aspartato Amônia-Liase/genética , Reatores Biológicos , Escherichia coli/metabolismo , Proteínas Recombinantes/biossíntese , Aeromonas/genética , Cromatografia Líquida de Alta Pressão , Clonagem Molecular , Fosfatos , Compostos de Potássio , Fatores de Tempo
10.
Biochemistry ; 51(21): 4237-43, 2012 May 29.
Artigo em Inglês | MEDLINE | ID: mdl-22551392

RESUMO

Members of the aspartase/fumarase superfamily share a common tertiary and quaternary fold, as well as a similar active site architecture; the superfamily includes aspartase, fumarase, argininosuccinate lyase, adenylosuccinate lyase, δ-crystallin, and 3-carboxy-cis,cis-muconate lactonizing enzyme (CMLE). These enzymes all process succinyl-containing substrates, leading to the formation of fumarate as the common product (except for the CMLE-catalyzed reaction, which results in the formation of a lactone). In the past few years, X-ray crystallographic analysis of several superfamily members in complex with substrate, product, or substrate analogues has provided detailed insights into their substrate binding modes and catalytic mechanisms. This structural work, combined with earlier mechanistic studies, revealed that members of the aspartase/fumarase superfamily use a common catalytic strategy, which involves general base-catalyzed formation of a stabilized aci-carboxylate (or enediolate) intermediate and the participation of a highly flexible loop, containing the signature sequence GSSxxPxKxN (named the SS loop), in substrate binding and catalysis.


Assuntos
Aspartato Amônia-Liase/química , Aspartato Amônia-Liase/metabolismo , Fumarato Hidratase/química , Fumarato Hidratase/metabolismo , Adenilossuccinato Liase/química , Adenilossuccinato Liase/genética , Adenilossuccinato Liase/metabolismo , Sequência de Aminoácidos , Argininossuccinato Liase/química , Argininossuccinato Liase/genética , Argininossuccinato Liase/metabolismo , Aspartato Amônia-Liase/genética , Catálise , Domínio Catalítico , Sequência Conservada , Escherichia coli/enzimologia , Escherichia coli/genética , Proteínas de Escherichia coli/química , Proteínas de Escherichia coli/genética , Proteínas de Escherichia coli/metabolismo , Fumarato Hidratase/genética , Humanos , Liases Intramoleculares/química , Liases Intramoleculares/genética , Liases Intramoleculares/metabolismo , Modelos Moleculares , Dados de Sequência Molecular , Estrutura Quaternária de Proteína , Estrutura Terciária de Proteína , Saccharomyces cerevisiae/enzimologia , Saccharomyces cerevisiae/genética , Proteínas de Saccharomyces cerevisiae/química , Proteínas de Saccharomyces cerevisiae/genética , Proteínas de Saccharomyces cerevisiae/metabolismo , Homologia de Sequência de Aminoácidos , Especificidade por Substrato , delta-Cristalinas/química , delta-Cristalinas/genética , delta-Cristalinas/metabolismo
11.
Bioprocess Biosyst Eng ; 35(8): 1437-44, 2012 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-22527030

RESUMO

L-aspartate ammonia-lyase from Bacillus sp. YM55-1 (AspB, EC 4.3.1.1) catalyzes the reversible conversion of L-aspartate (Asp) into fumarate and ammonia with a high specific activity toward the substrate. AspB was expressed in Escherichia coli and partially purified by heat precipitation and saturation with ammonium sulfate reaching purification factor of 7.7 and specific activity of 334 U/mg of protein. AspB was immobilized by covalent attachment on Eupergit® C (epoxy support) and MANA-agarose (amino support), and entrapment in LentiKats® (polyvinyl alcohol) with retained activities of 24, 85 and 63 %, respectively. Diffusional limitations were only observed for the enzyme immobilized in LentiKats® and were overcome by increasing substrate concentration. Free and immobilized AspB were used for the synthesis of aspartate achieving high product concentration (≥450 mM) after 24 h of reaction. Immobilized biocatalysts were efficiently reused in 5 cycles of Asp synthesis, keeping over 90 % of activity and reaching over 90 % of conversion in all the cases.


Assuntos
Aspartato Amônia-Liase/química , Ácido Aspártico/biossíntese , Bacillus/enzimologia , Proteínas de Bactérias/química , Enzimas Imobilizadas/química , Aspartato Amônia-Liase/genética , Ácido Aspártico/química , Bacillus/genética , Proteínas de Bactérias/genética , Catálise , Enzimas Imobilizadas/genética , Escherichia coli , Concentração de Íons de Hidrogênio , Proteínas Recombinantes/química , Proteínas Recombinantes/genética
12.
Appl Biochem Biotechnol ; 167(5): 991-1001, 2012 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-22328292

RESUMO

Aspartase (L-aspartate ammonia-lyase; EC 4.3.1.1) catalyzes the reversible amination of fumaric acid to produce L-aspartic acid. Aspartase coding gene (aspA) of Aeromonas media NFB-5 was cloned, sequenced, and expressed with His tag using pET-21b⁺ expression vector in Escherichia coli BL21. Higher expression was obtained with IPTG (1.5 mM) induction for 5 h at 37 °C in LB medium supplemented with 0.3% K2HPO4 and 0.3% KH2PO4. Recombinant His tagged aspartase was purified using Ni-NTA affinity chromatography and characterized for various biochemical and kinetic parameters. The purified aspartase showed optimal activity at pH 8.5 and 8.0 in the presence and absence of magnesium ions, respectively. The optimum temperature was determined to be 35 °C. The enzyme showed apparent K(m) and V(max) values for L-aspartate as 2.01 mM and 114 U/mg, respectively. The enzyme was stable in pH range of 6.5-9.5 and temperature up to 45 °C. Divalent metal ion requirement of enzyme was efficiently fulfilled by Mg²âº, Mn²âº, and Ca²âº ions. The cloned gene (aspA) product showed molecular weight of approximately 51 kDa by SDS-PAGE, which is in agreement with the molecular weight calculated from putative amino acid sequence. This is the first report on expression and characterization of recombinant aspartase from A. media.


Assuntos
Aeromonas/enzimologia , Aspartato Amônia-Liase/isolamento & purificação , Aspartato Amônia-Liase/metabolismo , Cromatografia de Afinidade , Proteínas Recombinantes/isolamento & purificação , Proteínas Recombinantes/metabolismo , Aeromonas/genética , Sequência de Aminoácidos , Aspartato Amônia-Liase/química , Aspartato Amônia-Liase/genética , Clonagem Molecular , Entropia , Ativação Enzimática , Estabilidade Enzimática , Meia-Vida , Concentração de Íons de Hidrogênio , Cinética , Metais/farmacologia , Dados de Sequência Molecular , Peso Molecular , Proteínas Recombinantes/química , Proteínas Recombinantes/genética , Temperatura
13.
J Vet Diagn Invest ; 22(5): 741-4, 2010 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-20807932

RESUMO

The purpose of the current study was to compare the molecular detection rate of Lawsonia intracellularis between feces and rectal swabs collected from 42 foals with suspected equine proliferative enteropathy (EPE). Fecal samples and rectal swabs were processed for DNA purification by using an automated extraction system. The purified DNA was then analyzed by real-time polymerase chain reaction (PCR) for the presence of the aspartate ammonia lyase (aspA) gene of L. intracellularis. Absolute quantitation was calculated by using a standard curve for L. intracellularis and expressed as copy numbers of the aspA gene of L. intracellularis per microliter of purified DNA. The combined PCR detection rate for L. intracellularis was 90%, with 38 foals testing PCR positive in feces (33 samples), rectal swabs (32), or both (27). Six foals tested PCR positive only in feces, whereas 5 tested positive only in rectal swabs. Feces yielded a significantly higher aspA gene copy number of L. intracellularis than rectal swabs. Feces and rectal swabs tested PCR negative from 4 foals. In conclusion, the results showed that feces yielded similar numbers of PCR-positive results, with a higher L. intracellularis aspA gene load than rectal swabs. By analyzing dual samples, the PCR detection rate for L. intracellularis increased from 76% and 79% for rectal swabs and feces, respectively, to 90%. Rectal swabs should be considered as an alternative sample type for EPE-suspected patients with decreased or no fecal output.


Assuntos
Infecções por Desulfovibrionaceae/veterinária , Doenças dos Cavalos/virologia , Lawsonia (Bactéria)/genética , Animais , Aspartato Amônia-Liase/genética , Proteínas de Bactérias/genética , DNA Bacteriano/genética , DNA Bacteriano/isolamento & purificação , Infecções por Desulfovibrionaceae/virologia , Fezes/virologia , Genes Bacterianos , Cavalos , Lawsonia (Bactéria)/isolamento & purificação , Reação em Cadeia da Polimerase/métodos , Reação em Cadeia da Polimerase/veterinária , RNA Ribossômico 16S/genética , Reto/virologia
14.
FEBS Lett ; 584(11): 2311-4, 2010 Jun 03.
Artigo em Inglês | MEDLINE | ID: mdl-20371246

RESUMO

Enteric bacteria have developed various survival systems that protect against acid stress. In this study, an aspartate-dependent acid survival system is characterized in Yersinia pseudotuberculosis. The expression of aspartase (AspA) was confirmed to be increased at acidic pH by proteomic and lacZ fusion analyses. Addition of aspartate increased acid survival of the wild type but not the aspA knockout mutant. AspA increases acid survival by producing ammonia as demonstrated by mutation and in vitro enzyme activity analyses. This is the first demonstration that an enzyme involved in aspartate metabolism plays a role in acid survival in an enteric bacterium.


Assuntos
Ácidos/metabolismo , Aspartato Amônia-Liase/metabolismo , Ácido Aspártico/metabolismo , Yersinia pseudotuberculosis/metabolismo , Aspartato Amônia-Liase/química , Aspartato Amônia-Liase/genética , Ácido Aspártico/genética , Mutação , Yersinia pseudotuberculosis/enzimologia , Yersinia pseudotuberculosis/genética
15.
FEBS J ; 276(11): 2994-3007, 2009 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-19490103

RESUMO

Aspartate ammonia lyases (also referred to as aspartases) catalyze the reversible deamination of L-aspartate to yield fumarate and ammonia. In the proposed mechanism for these enzymes, an active site base abstracts a proton from C3 of L-aspartate to form an enzyme-stabilized enediolate intermediate. Ketonization of this intermediate eliminates ammonia and yields the product, fumarate. Although two crystal structures of aspartases have been determined, details of the catalytic mechanism have not yet been elucidated. In the present study, eight active site residues (Thr101, Ser140, Thr141, Asn142, Thr187, His188, Lys324 and Asn326) were mutated in the structurally characterized aspartase (AspB) from Bacillus sp. YM55-1. On the basis of a model of the complex in which L-aspartate was docked manually into the active site of AspB, the residues responsible for binding the amino group of L-aspartate were predicted to be Thr101, Asn142 and His188. This postulate is supported by the mutagenesis studies: mutations at these positions resulted in mutant enzymes with reduced activity and significant increases in the K(m) for L-aspartate. Studies of the pH dependence of the kinetic parameters of AspB revealed that a basic group with a pK(a) of approximately 7 and an acidic group with a pK(a) of approximately 10 are essential for catalysis. His188 does not play the typical role of active site base or acid because the H188A mutant retained significant activity and displayed an unchanged pH-rate profile compared to that of wild-type AspB. Mutation of Ser140 and Thr141 and kinetic analysis of the mutant enzymes revealed that these residues are most likely involved in substrate binding and in stabilizing the enediolate intermediate. Mutagenesis studies corroborate the essential role of Lys324 because all mutations at this position resulted in mutant enzymes that were completely inactive. The substrate-binding model and kinetic analysis of mutant enzymes suggest that Thr187 and Asn326 assist Lys324 in binding the C1 carboxylate group of the substrate. A catalytic mechanism for AspB is presented that accounts for the observed properties of the mutant enzymes. Several features of the mechanism that are also found in related enzymes are discussed in detail and may help to define a common substrate binding mode for the lyases in the aspartase/fumarase superfamily.


Assuntos
Aspartato Amônia-Liase/metabolismo , Bacillus/enzimologia , Proteínas de Bactérias/metabolismo , Mutagênese Sítio-Dirigida/métodos , Substituição de Aminoácidos , Asparagina/genética , Asparagina/metabolismo , Aspartato Amônia-Liase/antagonistas & inibidores , Aspartato Amônia-Liase/genética , Ácido Aspártico/metabolismo , Bacillus/genética , Proteínas de Bactérias/química , Proteínas de Bactérias/genética , Sítios de Ligação/genética , Catálise/efeitos dos fármacos , Domínio Catalítico/genética , Dicroísmo Circular , Histidina/genética , Histidina/metabolismo , Concentração de Íons de Hidrogênio , Cinética , Lisina/genética , Lisina/metabolismo , Malatos/farmacologia , Modelos Moleculares , Proteínas Mutantes/química , Proteínas Mutantes/genética , Proteínas Mutantes/metabolismo , Nitrocompostos/farmacologia , Propionatos/farmacologia , Estrutura Terciária de Proteína , Serina/genética , Serina/metabolismo , Especificidade por Substrato , Treonina/genética , Treonina/metabolismo
16.
Microbiology (Reading) ; 155(Pt 1): 198-209, 2009 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-19118360

RESUMO

It is established that Yersinia pestis, the causative agent of bubonic plague, recently evolved from enteropathogenic Yersinia pseudotuberculosis by undergoing chromosomal degeneration while acquiring two unique plasmids that facilitate tissue invasion (pPCP) and dissemination by fleabite (pMT). Thereafter, plague bacilli spread from central Asia to sylvatic foci throughout the world. These epidemic isolates exhibit a broad host range including man as opposed to enzootic (pestoides) variants that remain in ancient reservoirs where infection is limited to muroid rodents. Cells of Y. pseudotuberculosis are known to express glucose-6-phosphate dehydrogenase (Zwf) and aspartase (AspA); these activities are not detectable in epidemic Y. pestis due to missense mutations (substitution of proline for serine at amino position 155 of Zwf and leucine for valine at position 363 of AspA). In this study, functional Zwf was found in pestoides strains E, F and G but not seven other enzootic isolates; enzymic activity was associated with retention of serine at amino acid position 155. Essentially, full AspA activity occurred in pestoides isolates where valine (pestoides A, B, C and D) or serine (pestoides E, F, G and I) occupied position 363. Reduced activity occurred in strains Angola and A16, which contained phenylalanine at this position. The kcat but not Km of purified AspA from strain Angola was significantly reduced. In this context, aspA of the recently described attenuated enzootic microtus biovar encodes active valine at position 363, further indicating that functional AspA is a biomarker for avirulence of Y. pestis in man.


Assuntos
Aspartato Amônia-Liase/genética , Aspartato Amônia-Liase/metabolismo , Roedores/microbiologia , Yersinia pestis/enzimologia , Yersinia pestis/patogenicidade , Animais , Surtos de Doenças , Glucosefosfato Desidrogenase/genética , Glucosefosfato Desidrogenase/metabolismo , Humanos , Peste/epidemiologia , Peste/microbiologia , Doenças dos Roedores/microbiologia , Virulência , Yersiniose/microbiologia , Yersiniose/veterinária , Yersinia pestis/classificação , Yersinia pestis/isolamento & purificação , Yersinia pseudotuberculosis/enzimologia
17.
Vet Microbiol ; 136(1-2): 173-6, 2009 Apr 14.
Artigo em Inglês | MEDLINE | ID: mdl-19019573

RESUMO

The goals of this study were to evaluate titers of antibodies against Lawsonia intracellularis in 68 resident broodmares from a farm known to be endemic for equine proliferative enteropathy (EPE) and to evaluate maternal antibodies, occurrence of seroconversion and fecal shedding in their foals. Serum samples collected from mares at delivery and from foals pre- and post-colostrum ingestion and monthly thereafter were tested for the presence of L. intracellularis antibodies by immunoperoxidase monolayer assay (IPMA). Further, feces collected from mares at delivery and foals post-partum and monthly thereafter were assayed for L. intracellularis using real-time PCR. Thirty-seven mares (54.4%) had detectable antibody titers (> or =60) against L. intracellularis by IPMA at the time of foaling. Passive transfer of colostral antibodies against L. intracellularis was documented in 37 foals (54.4%) and the colostral antibodies remained detectable in the serum of foals for 1-3 months. Overall, 22 foals (33.3%) showed evidence of natural exposure to L. intracellularis throughout the study period, however, none of the study foals developed signs compatible with EPE. The serological results showed that mares residing on a farm known to be endemic for EPE are routinely exposed to L. intracellularis and that antibodies against L. intracellularis are passively transferred to foals.


Assuntos
Infecções por Desulfovibrionaceae/veterinária , Doenças Endêmicas/veterinária , Enterite/veterinária , Doenças dos Cavalos/epidemiologia , Doenças dos Cavalos/microbiologia , Lawsonia (Bactéria)/isolamento & purificação , Animais , Animais Recém-Nascidos , Anticorpos Antibacterianos/sangue , Aspartato Amônia-Liase/química , Aspartato Amônia-Liase/genética , California/epidemiologia , DNA Bacteriano/química , DNA Bacteriano/genética , Infecções por Desulfovibrionaceae/epidemiologia , Infecções por Desulfovibrionaceae/imunologia , Infecções por Desulfovibrionaceae/microbiologia , Enterite/epidemiologia , Enterite/imunologia , Enterite/microbiologia , Fezes/microbiologia , Feminino , Doenças dos Cavalos/imunologia , Cavalos , Imunidade Materno-Adquirida/imunologia , Técnicas Imunoenzimáticas/veterinária , Lawsonia (Bactéria)/genética , Lawsonia (Bactéria)/imunologia , Reação em Cadeia da Polimerase/veterinária , Estudos Soroepidemiológicos , Estatísticas não Paramétricas
18.
Chemistry ; 14(32): 10094-100, 2008.
Artigo em Inglês | MEDLINE | ID: mdl-18844200

RESUMO

The gene encoding aspartate ammonia lyase (aspB) from Bacillus sp. YM55-1 has been cloned and overexpressed, and the recombinant enzyme containing a C-terminal His(6) tag has been purified to homogeneity and subjected to kinetic characterization. Kinetic studies have shown that the His(6) tag does not affect AspB activity. The enzyme processes L-aspartic acid, but not D-aspartic acid, with a K(m) of approximately 15 mM and a k(cat) of approximately 40 s(-1). By using this recombinant enzyme in the reverse reaction, a set of four N-substituted aspartic acids were prepared by the Michael addition of hydroxylamine, hydrazine, methoxylamine, and methylamine to fumarate. Both hydroxylamine and hydrazine were found to be excellent substrates for AspB. The k(cat) values are comparable to those observed for the AspB-catalyzed addition of ammonia to fumarate ( approximately 90 s(-1)), whereas the K(m) values are only slightly higher. The products of the enzyme-catalyzed addition of hydrazine, methoxylamine, and methylamine to fumarate were isolated and characterized by NMR spectroscopy and HPLC analysis, which revealed that AspB catalyzes all the additions with excellent enantioselectivity (>97 % ee). Its broad nucleophile specificity and high catalytic activity make AspB an attractive enzyme for the enantioselective synthesis of N-substituted aspartic acids, which are interesting building blocks for peptide and pharmaceutical synthesis as well as for peptidomimetics.


Assuntos
Aspartato Amônia-Liase/metabolismo , Ácido Aspártico/síntese química , Aspartato Amônia-Liase/química , Aspartato Amônia-Liase/genética , Ácido Aspártico/química , Bacillus/enzimologia , Estrutura Molecular , Proteínas Recombinantes/química , Proteínas Recombinantes/genética , Proteínas Recombinantes/metabolismo , Estereoisomerismo , Especificidade por Substrato
19.
Microbiology (Reading) ; 154(Pt 5): 1271-1280, 2008 May.
Artigo em Inglês | MEDLINE | ID: mdl-18451035

RESUMO

It is established that cells of Yersinia pestis, the causative agent of bubonic plague, excrete l-aspartic acid at the expense of exogenous l-glutamic acid during expression of the low-calcium response. Results of enzymic analysis provided here suggest that a previously defined deficiency of aspartase (AspA) accounts for this phenomenon rather than an elevated oxaloacetate pool. The only known distinction between most sequenced isolates of aspA from Y. pestis and the active gene in Yersinia pseudotuberculosis (the immediate progenitor of Y. pestis) is a single base transversion (G.C-->T.A) causing replacement of leucine (encoded by UUG) for valine (encoded by GUG) at amino acid position 363. The gene from Y. pestis KIM possesses a unique second transversion (G.C-->T.A) at amino acid 146 causing substitution of aspartic acid (encoded by GAU) with tyrosine (encoded by UAU). We show in this study that Y. pestis expresses aspA as cross-reacting immunological material (CRIM). Functional and inactive aspA of Y. pseudotuberculosis PB1 and Y. pestis KIM, respectively, were then cloned and expressed in AspA-deficient Escherichia coli. After purification to near homogeneity, the products were subjected to biochemical analysis and found to exhibit similar secondary, tertiary and quaternary (tetrameric) structures as well as comparable Michaelis constants for l-aspartic acid. However, the k(cat) of the Y. pestis CRIM of strain KIM is only about 0.1 % of that determined for the active AspA of Y. pseudotuberculosis. Return of valine for leucine at position 363 of the Y. pestis enzyme restored normal turnover (k(cat) 86+/-2 s(-1)) provided that the amino acid substitution at position 146 was also reversed. These observations have important implications for understanding the nature of the stringent low-calcium response of Y. pestis and its role in promoting acute disease.


Assuntos
Aspartato Amônia-Liase/genética , Aspartato Amônia-Liase/metabolismo , Mutação de Sentido Incorreto , Yersinia pestis/enzimologia , Sequência de Aminoácidos , Substituição de Aminoácidos/genética , Aspartato Amônia-Liase/química , Aspartato Amônia-Liase/isolamento & purificação , Ácido Aspártico/metabolismo , Dicroísmo Circular , Clonagem Molecular , Escherichia coli/genética , Ácido Glutâmico/metabolismo , Cinética , Modelos Moleculares , Dados de Sequência Molecular , Mutagênese Sítio-Dirigida , Conformação Proteica , Alinhamento de Sequência , Yersinia pestis/genética , Yersinia pseudotuberculosis/enzimologia , Yersinia pseudotuberculosis/genética
20.
Mol Microbiol ; 69(1): 77-93, 2008 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-18433445

RESUMO

Amino acids are key carbon and energy sources for the asaccharolytic food-borne human pathogen Campylobacter jejuni. During microaerobic growth in amino acid rich complex media, aspartate, glutamate, proline and serine are the only amino acids significantly utilized by strain NCTC 11168. The catabolism of aspartate and glutamate was investigated. An aspartase (aspA) mutant (unable to utilize any amino acid except serine) and a Cj0762c (aspB) mutant lacking aspartate:glutamate aminotransferase (unable to utilize glutamate), were severely growth impaired in complex media, and an aspA sdaA mutant (also lacking serine dehydratase) failed to grow in complex media unless supplemented with pyruvate and fumarate. Aspartase was shown by activity and proteomic analyses to be upregulated by oxygen limitation, and aspartate enhanced oxygen-limited growth of C. jejuni in an aspA-dependent manner. Stoichiometric aspartate uptake and succinate excretion involving the redundant DcuA and DcuB transporters indicated that in addition to a catabolic role, AspA can provide fumarate for respiration. Significantly, an aspA mutant of C. jejuni 81-176 was impaired in its ability to persist in the intestines of outbred chickens relative to the parent strain. Together, our data highlight the dual function of aspartase in C. jejuni and suggest a role during growth in the avian gut.


Assuntos
Aminoácidos/metabolismo , Aspartato Aminotransferases/metabolismo , Aspartato Amônia-Liase/metabolismo , Proteínas de Bactérias/metabolismo , Campylobacter jejuni/enzimologia , Campylobacter jejuni/crescimento & desenvolvimento , Oxigênio/metabolismo , Aerobiose , Animais , Aspartato Aminotransferases/genética , Aspartato Amônia-Liase/química , Aspartato Amônia-Liase/genética , Ácido Aspártico/metabolismo , Proteínas de Bactérias/genética , Vias Biossintéticas , Infecções por Campylobacter/microbiologia , Infecções por Campylobacter/veterinária , Campylobacter jejuni/química , Campylobacter jejuni/genética , Galinhas , Meios de Cultura/química , Transportadores de Ácidos Dicarboxílicos/genética , Transportadores de Ácidos Dicarboxílicos/metabolismo , Fumaratos/metabolismo , Ácido Glutâmico/metabolismo , Humanos , Cinética , Mutação , Transcrição Gênica
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