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1.
Proc Natl Acad Sci U S A ; 119(4)2022 01 25.
Artigo em Inglês | MEDLINE | ID: mdl-35058355

RESUMO

Songbirds have one special accessory chromosome, the so-called germline-restricted chromosome (GRC), which is only present in germline cells and absent from all somatic tissues. Earlier work on the zebra finch (Taeniopygia guttata castanotis) showed that the GRC is inherited only through the female line-like the mitochondria-and is eliminated from the sperm during spermatogenesis. Here, we show that the GRC has the potential to be paternally inherited. Confocal microscopy using GRC-specific fluorescent in situ hybridization probes indicated that a considerable fraction of sperm heads (1 to 19%) in zebra finch ejaculates still contained the GRC. In line with these cytogenetic data, sequencing of ejaculates revealed that individual males from two families differed strongly and consistently in the number of GRCs in their ejaculates. Examining a captive-bred male hybrid of the two zebra finch subspecies (T. g. guttata and T. g. castanotis) revealed that the mitochondria originated from a castanotis mother, whereas the GRC came from a guttata father. Moreover, analyzing GRC haplotypes across nine castanotis matrilines, estimated to have diverged for up to 250,000 y, showed surprisingly little variability among GRCs. This suggests that a single GRC haplotype has spread relatively recently across all examined matrilines. A few diagnostic GRC mutations that arose since this inferred spreading suggest that the GRC has continued to jump across matriline boundaries. Our findings raise the possibility that certain GRC haplotypes could selfishly spread through the population via occasional paternal transmission, thereby outcompeting other GRC haplotypes that were limited to strict maternal inheritance, even if this was partly detrimental to organismal fitness.


Assuntos
Cromossomos , Células Germinativas , Herança Paterna , Aves Canoras/genética , Animais , Análise Citogenética , DNA Mitocondrial , Evolução Molecular , Feminino , Haplótipos , Masculino , Filogenia , Aves Canoras/classificação , Espermatozoides
2.
Sci Rep ; 11(1): 11600, 2021 06 02.
Artigo em Inglês | MEDLINE | ID: mdl-34078943

RESUMO

Sexual signals are archetypes of contingent evolution: hyper-diverse across species, often evolving fast and in unpredictable directions. It is unclear to which extent their evolutionary unpredictability weakens deterministic evolution, or takes place bounded by deterministic patterns of trait evolution. We compared the evolution of sound frequency in sexual signals (advertisement songs) and non-sexual social signals (calls) across > 500 genera of the crown songbird families. Contrary to the acoustic adaptation hypothesis, we found no evidence that forest species used lower sound frequencies in songs or calls. Consistent with contingent evolution in song, we found lower phylogenetic signal for the sound frequency of songs than calls, which suggests faster and less predictable evolution, and found unpredictable direction of evolution in lineages with longer songs, which presumably experience stronger sexual selection on song. Nonetheless, the most important deterministic pattern of sound frequency evolution-its negative association with body size-was stronger in songs than calls. This can be explained by songs being longer-range signals than most calls, and thus using sound frequencies that animals of a given size produce best at high amplitude. Results indicate that sexual selection can increase aspects of evolutionary contingency while strengthening, rather than weakening, deterministic patterns of evolution.


Assuntos
Adaptação Fisiológica , Evolução Biológica , Aves Canoras/fisiologia , Vocalização Animal/fisiologia , Acústica/instrumentação , Animais , Tamanho Corporal , Feminino , Masculino , Filogenia , Aves Canoras/classificação , Som
3.
Mol Phylogenet Evol ; 162: 107206, 2021 09.
Artigo em Inglês | MEDLINE | ID: mdl-34015447

RESUMO

Several bird taxa have been recently described or elevated to full species and almost twice as many bird species than are currently recognized may exist. Defining species is one of the most basic and important issues in biological science because unknown or poorly defined species hamper subsequent studies. Here, we evaluate the species limits and evolutionary history of Tunchiornis ochraceiceps-a widespread forest songbird that occurs in the lowlands of Central America, Chocó and Amazonia-using an integrative approach that includes plumage coloration, morphometrics, vocalization and genomic data. The species has a relatively old crown age (~9 Ma) and comprises several lineages with little, if any, evidence of gene flow among them. We propose a taxonomic arrangement composed of four species, three with a plumage coloration diagnosis and one deeply divergent cryptic species. Most of the remaining lineages have variable but unfixed phenotypic characters despite their relatively old origin. This decoupling of genomic and phenotypic differentiation reveals a remarkable case of phenotypic conservatism, possibly due to strict habitat association. Lineages are geographically delimited by the main Amazonian rivers and the Andes, a pattern observed in studies of other understory upland forest Neotropical birds, although phylogenetic relationships and divergence times among populations are idiosyncratic.


Assuntos
Variação Genética , Genômica , Filogenia , Aves Canoras/classificação , Aves Canoras/genética , Animais , Fluxo Gênico , Fenótipo
4.
Evolution ; 75(5): 1046-1060, 2021 05.
Artigo em Inglês | MEDLINE | ID: mdl-33724456

RESUMO

Climatic niches describe the climatic conditions in which species can persist. Shifts in climatic niches have been observed to coincide with major climatic change, suggesting that species adapt to new conditions. We test the relationship between rates of climatic niche evolution and paleoclimatic conditions through time for 65 Old-World flycatcher species (Aves: Muscicapidae). We combine niche quantification for all species with dated phylogenies to infer past changes in the rates of niche evolution for temperature and precipitation niches. Paleoclimatic conditions were inferred independently using two datasets: a paleoelevation reconstruction and the mammal fossil record. We find changes in climatic niches through time, but no or weak support for a relationship between niche evolution rates and rates of paleoclimatic change for both temperature and precipitation niche and for both reconstruction methods. In contrast, the inferred relationship between climatic conditions and niche evolution rates depends on paleoclimatic reconstruction method: rates of temperature niche evolution are significantly negatively related to absolute temperatures inferred using the paleoelevation model but not those reconstructed from the fossil record. We suggest that paleoclimatic change might be a weak driver of climatic niche evolution in birds and highlight the need for greater integration of different paleoclimate reconstructions.


Assuntos
Mudança Climática , Ecossistema , Aves Canoras/classificação , Altitude , Animais , Evolução Biológica , Filogenia , Aves Canoras/fisiologia
5.
PLoS One ; 15(8): e0233627, 2020.
Artigo em Inglês | MEDLINE | ID: mdl-32804928

RESUMO

We studied avian development in 49 to 153 species of temperate and tropical New World passerine birds to determine how growth rates, and incubation and nestling periods, varied in relation to other life-history traits. We collected growth data and generated unbiased mass and tarsus growth rate estimates (mass n = 92 species, tarsus n = 49 species), and measured incubation period (n = 151) and nestling period (n = 153), which we analyzed with respect to region, egg mass, adult mass, clutch size, parental care type, nest type, daily nest predation rate (DMR), and nest height. We investigated covariation of life-history and natural-history attributes with the four development traits after controlling for phylogeny. Species in our lowland tropical sample grew 20% (incubation period), 25% (mass growth rate), and 26% (tarsus growth rate) more slowly than in our temperate sample. Nestling period did not vary with respect to latitude, which suggests that tropical songbirds fledge in a less well-developed state than temperate species. Suboscine species typically exhibited slower embryonic and post-embryonic growth than oscine passerines regardless of their breeding region. This pattern of slow development in tropical species could reflect phylogenetic effects based on unknown physiological attributes. Time-dependent nest mortality was unrelated to nestling mass growth rate, tarsus growth rate, and incubation period, but was significantly associated with nestling period. This suggests that nest predation, the predominant cause of nest loss in songbirds, does not exert strong selection on physiologically constrained traits, such as embryonic and post-embryonic growth, among our samples of temperate and lowland tropical songbird species. Nestling period, which is evolutionarily more labile than growth rate, was significantly shorter in birds exposed to higher rates of nest loss and nesting at lower heights, among other traits. Differences in life-history variation across latitudes provide insight into how unique ecological characteristics of each region influence physiological processes of passerines, and thus, how they can shape the evolution of life histories. While development traits clearly vary with respect to latitude, trait distributions overlap broadly. Life-history and natural history associations differ for each development trait, which suggests that unique selective pressures or constraints influence the evolution of each trait.


Assuntos
Aves Canoras/crescimento & desenvolvimento , Animais , Evolução Biológica , Clima , Tamanho da Ninhada , Análise Discriminante , Ecossistema , Feminino , Características de História de Vida , Modelos Lineares , Masculino , Michigan , Modelos Biológicos , Comportamento de Nidação/fisiologia , Oregon , Panamá , Filogenia , Comportamento Predatório/fisiologia , Reprodução/fisiologia , Seleção Genética , Aves Canoras/classificação , Aves Canoras/fisiologia , Especificidade da Espécie , Tarso Animal/crescimento & desenvolvimento , Clima Tropical
6.
Sci Rep ; 10(1): 9290, 2020 06 09.
Artigo em Inglês | MEDLINE | ID: mdl-32518318

RESUMO

The Northern Wheatear (Oenanthe oenanthe, including the nominate and the two subspecies O. o. leucorhoa and O. o. libanotica) and the Seebohm's Wheatear (Oenanthe seebohmi) are today regarded as two distinct species. Before, all four taxa were regarded as four subspecies of the Northern Wheatear. Their classification has exclusively been based on ecological and morphological traits, while their molecular characterization is still missing. With this study, we used next-generation sequencing to assemble 117 complete mitochondrial genomes covering O. o. oenanthe, O. o. leucorhoa and O. seebohmi. We compared the resolution power of each individual mitochondrial marker and concatenated marker sets to reconstruct the phylogeny and estimate speciation times of three taxa. Moreover, we tried to identify the origin of migratory wheatears caught on Helgoland (Germany) and on Crete (Greece). Mitogenome analysis revealed two different ancient lineages that separated around 400,000 years ago. Both lineages consisted of a mix of subspecies and species. The phylogenetic trees, as well as haplotype networks are incongruent with the present morphology-based classification. Mitogenome could not distinguish these presumed species. The genetic panmixia among present populations and taxa might be the consequence of mitochondrial introgression between ancient wheatear populations.


Assuntos
Especiação Genética , Genoma Mitocondrial/genética , Aves Canoras/classificação , Aves Canoras/genética , Migração Animal , Evolução Molecular , Alemanha , Grécia , Haplótipos/genética , Sequenciamento de Nucleotídeos em Larga Escala , Mitocôndrias/genética , Filogenia
7.
Mol Ecol ; 29(14): 2692-2706, 2020 07.
Artigo em Inglês | MEDLINE | ID: mdl-32542783

RESUMO

Quaternary climate oscillations are a well-known driver of animal diversification, but their effects are most well studied in areas where glaciations lead to habitat fragmentation. In large areas of the planet, however, glaciations have had the opposite effect, but here their impacts are much less well understood. This is especially true in Southeast Asia, where cyclical changes in land distribution have generated enormous land expansions during glacial periods. In this study, we selected a panel of five songbird species complexes covering a range of ecological specificities to investigate the effects Quaternary land bridges have had on the connectivity of Southeast Asian forest biota. Specifically, we combined morphological and bioacoustic analysis with an arsenal of population genomic and modelling approaches applied to thousands of genome-wide DNA markers across a total of more than 100 individuals. Our analyses show that species dependent on forest understorey exhibit deep differentiation between Borneo and western Sundaland, with no evidence of gene flow during the land bridges accompanying the last 1-2 ice ages. In contrast, dispersive canopy species and habitat generalists have experienced more recent gene flow. Our results argue that there remains much cryptic species-level diversity to be discovered in Southeast Asia even in well-known animal groups such as birds, especially in nondispersive forest understorey inhabitants. We also demonstrate that Quaternary land bridges have not been equally suitable conduits of gene flow for all species complexes and that life history is a major factor in predicting relative population divergence time across Quaternary climate fluctuations.


Assuntos
Evolução Molecular , Fluxo Gênico , Genética Populacional , Aves Canoras , Animais , Sudeste Asiático , Bornéu , Ecossistema , Filogenia , Aves Canoras/classificação , Aves Canoras/genética
8.
Artigo em Inglês | MEDLINE | ID: mdl-32283178

RESUMO

Birds naturally maintain high glucose concentrations in the blood and tissues, even when relying on fat to meet the metabolic demands of flight or thermogenesis. One possibility is that high glucose levels might be needed to deal with these metabolic demands. Thus, we hypothesized that birds chronically exposed to colder temperatures and higher elevations have higher circulating glucose and tissue free glucose and glycogen compared to conspecifics living at warmer temperatures and lower elevations. Adult House Sparrows (Passer domesticus) and House Finches (Haemorhous mexicanus) were captured from Phoenix, AZ (340 m elevation), and Albuquerque, NM (1600 m elevation), during the summer and winter months. We measured plasma glucose, as well as free glucose and glycogen from multiple tissues. In general, high elevation and colder temperatures were associated with higher tissue glycogen and higher free glucose concentrations in the brain. These findings indicate that glucose and glycogen are subject to seasonal phenotypic flexibility as well as geographic variations that may relate to local food availability and abundance.


Assuntos
Altitude , Glucose/metabolismo , Glicogênio/metabolismo , Estações do Ano , Aves Canoras/metabolismo , Animais , Encéfalo/metabolismo , Aves Canoras/classificação , Especificidade da Espécie , Termogênese
9.
J Ethnobiol Ethnomed ; 16(1): 16, 2020 Mar 30.
Artigo em Inglês | MEDLINE | ID: mdl-32228669

RESUMO

BACKGROUND: This study aimed to analyze the chain and dynamics of the trade of wild birds between keepers and traders in an area of northeast Brazil. Profit from the purchase and sale of these animals in the trade chain was also estimated. METHODS: The information was obtained through interviews with direct participants in the wild bird trade chain. RESULTS: We recorded a total of 34 bird species involved in illegal trade. In general, the purchase and sale values of songbirds are associated with the attractiveness and songs of the birds. Regarding the commercial potential of the species, those with high numbers of traded individuals had higher average purchase values and, especially, sale values. Birds with lower purchase values showed higher sale profits and were sold in large numbers. The purchase and sale values of songbirds in the present study show a significant economic return for those involved in this activity. CONCLUSIONS: The results of this study may provide data to support future studies on the conservation of wild birds, assisting in monitoring illegal trade, a persistent problem in the region studied.


Assuntos
Comércio , Conservação dos Recursos Naturais , Crime , Aves Canoras , Animais , Animais Selvagens , Brasil , Aves Canoras/classificação
10.
PLoS One ; 15(3): e0230151, 2020.
Artigo em Inglês | MEDLINE | ID: mdl-32191719

RESUMO

The Mediterranean Basin represents a Global Biodiversity Hotspot where many organisms show high inter- and intraspecific differentiation. Extant phylogeographic patterns of terrestrial circum-Mediterranean faunas were mainly shaped through Pleistocene range shifts and range fragmentations due to retreat into different glacial refugia. Thus, several extant Mediterranean bird species have diversified by surviving glaciations in different hospitable refugia and subsequently expanded their distribution ranges during the Holocene. Such a scenario was also suggested for the Eurasian Wren (Nannus troglodytes) despite the lack of genetic data for most Mediterranean subspecies. Our phylogenetic multi-locus analysis comprised 18 out of 28 currently accepted subspecies of N. troglodytes, including all but one subspecies which are present in the Mediterranean Basin. The resulting phylogenetic reconstruction dated the onset of the entire Holarctic radiation of three Nannus species to the early Pleistocene. In the Eurasian Wren, two North African subspecies represented separate basal lineages from the Maghreb (N. t. kabylorum) and from the Libyan Cyrenaica (N. t. juniperi), being only distantly related to other Mediterranean populations. Although N. troglodytes appeared to be paraphyletic with respect to the Nearctic Winter Wren (N. hiemalis), respective nodes did not receive strong statistical support. In contrast, paraphyly of the Ibero-Maghrebian taxon N. t. kabylorum was strongly supported. Southern Iberian populations of N. t. kabylorum did not clade with Maghrebian populations of the same subspecies but formed a sister clade to a highly diverse European clade (including nominate N. t. troglodytes and eight further taxa). In accordance with a pattern also found in other birds, Eurasian populations were split into a western clade (Europe, Caucasus) and an eastern clade (Central Asia, Sino-Himalayas, East Asia). This complex phylogeographic pattern revealed cryptic diversification in N. troglodytes, especially in the Iberio-Maghrebian region.


Assuntos
Filogeografia , Aves Canoras/classificação , África do Norte , Animais , Biodiversidade , Evolução Biológica , DNA Mitocondrial/genética , Europa (Continente) , Marcadores Genéticos/genética , Variação Genética , Filogenia , Aves Canoras/genética
11.
Science ; 367(6474): 167-170, 2020 01 10.
Artigo em Inglês | MEDLINE | ID: mdl-31919216

RESUMO

Birds are the best-known animal class, with only about five or six new species descriptions per year since 1999. Integrating genomic and phenotypic research with arduous fieldwork in remote regions, we describe five new songbird species and five new subspecies from a small area near Sulawesi, Indonesia, all collected in a single 6-week expedition. Two factors contributed to the description of this large number of species from such a small geographic area: (i) Knowledge of Quaternary Period land connections helped pinpoint isolated islands likely to harbor substantial endemism and (ii) studying accounts of historic collectors such as Alfred Wallace facilitated the identification of undercollected islands. Our findings suggest that humans' understanding of biogeographically complex regions such as Wallacea remains incomplete.


Assuntos
Biodiversidade , Aves Canoras/classificação , Animais , Extinção Biológica , Indonésia , Ilhas , Filogeografia
12.
Mol Ecol Resour ; 20(2): 560-578, 2020 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-31821695

RESUMO

The superb fairy-wren, Malurus cyaneus, is one of the most iconic Australian passerine species. This species belongs to an endemic Australasian clade, Meliphagides, which diversified early in the evolution of the oscine passerines. Today, the oscine passerines comprise almost half of all avian species diversity. Despite the rapid increase of available bird genome assemblies, this part of the avian tree has not yet been represented by a high-quality reference. To rectify that, we present the first high-quality genome assembly of a Meliphagides representative: the superb fairy-wren. We combined Illumina shotgun and mate-pair sequences, PacBio long-reads, and a genetic linkage map from an intensively sampled pedigree of a wild population to generate this genome assembly. Of the final assembled 1.07-Gb genome, 975 Mb (90.4%) was anchored onto 25 pseudochromosomes resulting in a final superscaffold N50 of 68.11 Mb. This high-quality bird genome assembly is one of only a handful which is also accompanied by a genetic map and recombination landscape. In comparison to other pedigree-based bird genetic maps, we find that the fairy-wren genetic map more closely resembles those of Taeniopygia guttata and Parus major maps, unlike the Ficedula albicollis map which more closely resembles that of Gallus gallus. Lastly, we also provide a predictive gene and repeat annotation of the genome assembly. This new high-quality, annotated genome assembly will be an invaluable resource not only regarding the superb fairy-wren species and relatives but also broadly across the avian tree by providing a novel reference point for comparative genomic analyses.


Assuntos
Genoma , Aves Canoras/classificação , Aves Canoras/genética , Animais , Austrália , Aves/classificação , Aves/genética , Ligação Genética , Filogenia
13.
Philos Trans R Soc Lond B Biol Sci ; 375(1789): 20180406, 2020 01 06.
Artigo em Inglês | MEDLINE | ID: mdl-31735157

RESUMO

Humans and songbirds learn to sing or speak by listening to acoustic models, forming auditory templates, and then learning to produce vocalizations that match the templates. These taxa have evolved specialized telencephalic pathways to accomplish this complex form of vocal learning, which has been reported for very few other taxa. By contrast, the acoustic structure of most animal vocalizations is produced by species-specific vocal motor programmes in the brainstem that do not require auditory feedback. However, many mammals and birds can learn to fine-tune the acoustic features of inherited vocal motor patterns based upon listening to conspecifics or noise. These limited forms of vocal learning range from rapid alteration based on real-time auditory feedback to long-term changes of vocal repertoire and they may involve different mechanisms than complex vocal learning. Limited vocal learning can involve the brainstem, mid-brain and/or telencephalic networks. Understanding complex vocal learning, which underpins human speech, requires careful analysis of which species are capable of which forms of vocal learning. Selecting multiple animal models for comparing the neural pathways that generate these different forms of learning will provide a richer view of the evolution of complex vocal learning and the neural mechanisms that make it possible. This article is part of the theme issue 'What can animal communication teach us about human language?'


Assuntos
Aprendizagem/classificação , Aprendizagem/fisiologia , Vocalização Animal/classificação , Vocalização Animal/fisiologia , Animais , Vias Auditivas/fisiologia , Percepção Auditiva , Aves/fisiologia , Encéfalo/fisiologia , Quirópteros/fisiologia , Retroalimentação Sensorial/fisiologia , Humanos , Vias Neurais/fisiologia , Aves Canoras/classificação , Fala
14.
Sci Rep ; 9(1): 20248, 2019 12 27.
Artigo em Inglês | MEDLINE | ID: mdl-31882957

RESUMO

Each year, billions of songbirds cross large ecological barriers during their migration. Understanding how they perform this incredible task is crucial to predict how global change may threaten the safety of such journeys. Earlier studies based on radar suggested that most songbirds cross deserts in intermittent flights at high altitude, stopping in the desert during the day, while recent tracking with light loggers suggested diurnal prolongation of nocturnal flights and common non-stop flights for some species. We analyzed light intensity and temperature data obtained from geolocation loggers deployed on 130 individuals of ten migratory songbird species, and show that a large variety of strategies for crossing deserts exists between, but also sometimes within species. Diurnal stopover in the desert is a common strategy in autumn, while most species prolonged some nocturnal flights into the day. Non-stop flights over the desert occurred more frequently in spring than in autumn, and more frequently in foliage gleaners. Temperature recordings suggest that songbirds crossed deserts with flight bouts performed at various altitudes according to species and season, along a gradient ranging from low above ground in autumn to probably >2000 m above ground level, and possibly at higher altitude in spring. High-altitude flights are therefore not the general rule for crossing deserts in migrant songbirds. We conclude that a diversity of migration strategies exists for desert crossing among songbirds, with variations between but also within species.


Assuntos
Migração Animal/fisiologia , Clima Desértico , Meio Ambiente , Voo Animal/fisiologia , Aves Canoras/fisiologia , Altitude , Animais , Ritmo Circadiano/fisiologia , Sistemas de Informação Geográfica , Luz , Estações do Ano , Aves Canoras/classificação , Especificidade da Espécie , Temperatura , Fatores de Tempo
15.
Sci Rep ; 9(1): 17002, 2019 11 18.
Artigo em Inglês | MEDLINE | ID: mdl-31740690

RESUMO

Ecdysteroids (arthropod molting hormones) play an important role in the development and sexual maturation of arthropods, and they have been shown to have anabolic and "energizing" effect in higher vertebrates. The aim of this study was to assess ecdysteroid diversity, levels according to bird species and months, as well as to observe the molting status of hard ticks (Acari: Ixodidae) infesting the birds. Therefore, blood samples and ticks were collected from 245 birds (244 songbirds and a quail). Mass spectrometric analyses showed that 15 ecdysteroids were regularly present in the blood samples. Molting hormones biologically most active in insects (including 20-hydroxyecdysone [20E], 2deoxy-20E, ajugasterone C and dacryhainansterone) reached different levels of concentration according to bird species and season. Similarly to ecdysteroids, the seasonal presence of affected, apolytic ticks peaked in July and August. In conclusion, this study demonstrates the presence of a broad range and high concentrations of ecdysteroids in the blood stream of wild-living passerine birds. These biologically active, anabolic compounds might possibly contribute to the known high metabolic rate of songbirds.


Assuntos
Animais Selvagens/sangue , Ecdisona/sangue , Ecdisteroides/sangue , Aves Canoras/sangue , Animais , Animais Selvagens/parasitologia , Artrópodes/crescimento & desenvolvimento , Artrópodes/metabolismo , Ecdisona/química , Ecdisteroides/química , Ecdisterona/análogos & derivados , Ecdisterona/sangue , Ecdisterona/química , Ecdisterona/metabolismo , Interações Hospedeiro-Parasita , Ixodidae/crescimento & desenvolvimento , Ixodidae/fisiologia , Estrutura Molecular , Muda , Estações do Ano , Aves Canoras/classificação , Aves Canoras/parasitologia , Especificidade da Espécie
16.
PLoS Biol ; 17(10): e3000478, 2019 10.
Artigo em Inglês | MEDLINE | ID: mdl-31639139

RESUMO

Genetic data indicate differences in speciation rate across latitudes, but underlying causes have been difficult to assess because a critical phase of the speciation process is initiated in allopatry, in which, by definition, individuals from different taxa do not interact. We conducted song playback experiments between 109 related pairs of mostly allopatric bird species or subspecies in Amazonia and North America to compare the rate of evolution of male discrimination of songs. Relative to local controls, the number of flyovers and approach to the speaker were higher in Amazonia. We estimate that responses to songs of relatives are being lost about 6 times more slowly in Amazonia than in North America. The slow loss of response holds even after accounting for differences in song frequency and song length. Amazonian species with year-round territories are losing aggressive responses especially slowly. We suggest the presence of many species and extensive interspecific territoriality favors recognition of songs sung by sympatric heterospecifics, which results in a broader window of recognition and hence an ongoing response to novel similar songs. These aggressive responses should slow the establishment of sympatry between recently diverged forms. If male responses to novel allopatric taxa reflect female responses, then premating reproductive isolation is also evolving more slowly in Amazonia. The findings are consistent with previously demonstrated slower recent rates of expansion of sister taxa into sympatry, slower rates of evolution of traits important for premating isolation, and slower rates of speciation in general in Amazonia than in temperate North America.


Assuntos
Especiação Genética , Filogenia , Reprodução/genética , Aves Canoras/classificação , Vocalização Animal/fisiologia , Animais , Brasil , Canadá , Feminino , Masculino , Peru , Filogeografia , Aves Canoras/genética , Simpatria , Estados Unidos , Gravação em Vídeo
17.
Genome Biol Evol ; 11(8): 2332-2343, 2019 08 01.
Artigo em Inglês | MEDLINE | ID: mdl-31418795

RESUMO

Müllerian mimicry rings are remarkable symbiotic species assemblages in which multiple members share a similar phenotype. However, their evolutionary origin remains poorly understood. Although gene flow among species has been shown to generate mimetic patterns in some Heliconius butterflies, mimicry is believed to be due to true convergence without gene flow in many other cases. We investigated the evolutionary history of multiple members of a passerine mimicry ring in the poisonous Papuan pitohuis. Previous phylogenetic evidence indicates that the aposematic coloration shared by many, but not all, members of this genus is ancestral and has only been retained by members of the mimicry ring. Using a newly assembled genome and thousands of genomic DNA markers, we demonstrate gene flow from the hooded pitohui (Pitohui dichrous) into the southern variable pitohui (Pitohui uropygialis), consistent with shared patterns of aposematic coloration. The vicinity of putatively introgressed loci is significantly enriched for genes that are important in melanin pigment expression and toxin resistance, suggesting that gene flow may have been instrumental in the sharing of plumage patterns and toxicity. These results indicate that interspecies gene flow may be a more general mechanism in generating mimicry rings than hitherto appreciated.


Assuntos
Animais Peçonhentos/genética , Evolução Biológica , Fluxo Gênico , Genoma , Pigmentação/genética , Proteínas/genética , Aves Canoras/genética , Animais , Fenótipo , Filogenia , Aves Canoras/classificação , Especificidade da Espécie
18.
Mol Phylogenet Evol ; 139: 106564, 2019 10.
Artigo em Inglês | MEDLINE | ID: mdl-31330265

RESUMO

New World thrushes in the genus Catharus are small, insectivorous or omnivorous birds that have been used to explore several important questions in avian evolution, including the evolution of seasonal migration and plumage variation. Within Catharus, members of a clade of obligate long-distance migrants (C. fuscescens, C. minimus, and C. bicknelli) have also been used in the development of heteropatric speciation theory, a divergence process in which migratory lineages (which might occur in allopatry or sympatry during portions of their annual cycle) diverge despite low levels of gene flow. However, research on Catharus relationships has thus far been restricted to the use of small genetic datasets, which provide limited resolution of both phylogenetic and demographic histories. We used a large, multi-locus dataset from loci containing ultraconserved elements (UCEs) to study the demographic histories of the migratory C. fuscescens-minimus-bicknelli clade and to resolve the phylogeny of the migratory species of Catharus. Our dataset included more than 2000 loci and over 1700 variable genotyped sites, and analyses supported our prediction of divergence with gene flow in the fully migratory clade, with significant gene flow among all three species. Our phylogeny of the genus differs from past work in its placement of C. ustulatus, and further analyses suggest historic gene flow throughout the genus, producing genetically reticulate (or network) phylogenies. This raises questions about trait origins and suggests that seasonal migration and the resulting migratory condition of heteropatry is likely to promote hybridization not only during pairwise divergence and speciation, but also among non-sisters.


Assuntos
Fluxo Gênico , Aves Canoras/genética , Migração Animal , Animais , DNA Mitocondrial/classificação , DNA Mitocondrial/genética , Especiação Genética , Hibridização Genética , Filogenia , Estações do Ano , Aves Canoras/classificação
19.
Syst Biol ; 68(6): 956-966, 2019 11 01.
Artigo em Inglês | MEDLINE | ID: mdl-31135028

RESUMO

Incomplete or geographically biased sampling poses significant problems for research in phylogeography, population genetics, phylogenetics, and species delimitation. Despite the power of using genome-wide genetic markers in systematics and related fields, approaches such as the multispecies coalescent remain unable to easily account for unsampled lineages. The Empidonax difficilis/Empidonax occidentalis complex of small tyrannid flycatchers (Aves: Tyrannidae) is a classic example of widely distributed species with limited phenotypic geographic variation that was broken into two largely cryptic (or "sibling") lineages following extensive study. Though the group is well-characterized north of the US Mexico border, the evolutionary distinctiveness and phylogenetic relationships of southern populations remain obscure. In this article, we use dense genomic and geographic sampling across the majority of the range of the E. difficilis/E. occidentalis complex to assess whether current taxonomy and species limits reflect underlying evolutionary patterns, or whether they are an artifact of historically biased or incomplete sampling. We find that additional samples from Mexico render the widely recognized species-level lineage E. occidentalis paraphyletic, though it retains support in the best-fit species delimitation model from clustering analyses. We further identify a highly divergent unrecognized lineage in a previously unsampled portion of the group's range, which a cline analysis suggests is more reproductively isolated than the currently recognized species E. difficilis and E. occidentalis. Our phylogeny supports a southern origin of these taxa. Our results highlight the pervasive impacts of biased geographic sampling, even in well-studied vertebrate groups like birds, and illustrate what is a common problem when attempting to define species in the face of recent divergence and reticulate evolution.


Assuntos
Marcadores Genéticos/genética , Filogenia , Aves Canoras/classificação , Aves Canoras/genética , Animais , Variação Genética , México , Viés de Seleção , Estados Unidos
20.
Nat Commun ; 10(1): 884, 2019 02 21.
Artigo em Inglês | MEDLINE | ID: mdl-30792389

RESUMO

Non-monogamous mating behaviors including polygyny or extra-pair paternity are theorized to amplify sexual selection, since some males attract multiple mates or copulate with paired females. In several well-studied songbird species, females prefer more complex songs and larger repertoires; thus, non-monogamous mating behaviors are predicted to accelerate song evolution, particularly toward increased complexity. However, studies within songbird clades have yielded mixed results, and the effect of non-monogamy on song evolution remains unclear. Here, we construct a large-scale database synthesizing mating system, extra-pair paternity, and song information and perform comparative analyses alongside songbird genetic phylogenies. Our results suggest that polygyny drives faster evolution of syllable repertoire size (measured as average number of unique syllables), but this rapid evolution does not produce larger repertoires in polygynous species. Instead, both large and small syllable repertoires quickly evolve toward moderate sizes in polygynous lineages. Contrary to expectation, high rates of extra-pair paternity coincide with smaller repertoires.


Assuntos
Evolução Biológica , Comportamento Sexual Animal/fisiologia , Aves Canoras/genética , Aves Canoras/fisiologia , Vocalização Animal/fisiologia , Animais , Bases de Dados Factuais , Feminino , Masculino , Ligação do Par , Filogenia , Aves Canoras/classificação , Especificidade da Espécie
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