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1.
Prostate ; 82(2): 260-268, 2022 02.
Artigo em Inglês | MEDLINE | ID: mdl-34783071

RESUMO

BACKGROUND: Inactivating missense mutations in the SPOP gene, encoding speckle-type poxvirus and zinc-finger protein, are one of the most common genetic alterations in prostate cancer. METHODS: We retrospectively identified 72 consecutive prostate cancer patients with somatic SPOP mutations, through next-generation sequencing analysis, who were treated at the Johns Hopkins Hospital. We evaluated clinical and genomic characteristics of this SPOP-mutant subset. RESULTS: SPOP alterations were clustered in the MATH domain, with hotspot mutations involving the F133 and F102 residues. The most frequent concurrent genetic alterations were in APC (16/72 [22%]), PTEN (13/72 [18%]), and TP53 (11/72 [15%]). SPOP-mutant cancers appeared to be mutually exclusive with tumors harboring the TMPRSS2-ERG fusion, and were significantly enriched for Wnt pathway (APC, CTNNB1) mutations and de-enriched for TP53/PTEN/RB1 alterations. Patients with mtSPOP had durable responses to androgen deprivation therapy (ADT) with a median time-to-castration-resistance of 42.0 (95% confidence interval [CI], 25.7-60.8) months. However, time-to-castration-resistance was significantly shorter in SPOP-mutant patients with concurrent TP53 mutations (hazard ratio [HR] 4.53; p = 0.002), HRD pathway (ATM, BRCA1/2, and CHEK2) mutations (HR 3.19; p = 0.003), and PI3K pathway (PTEN, PIK3CA, and AKT1) alterations (HR 2.69; p = 0.004). In the castration-resistant prostate cancer setting, median progression-free survival was 8.9 (95% CI, 6.7-NR) months on abiraterone and 7.3 (95% CI, 3.2-NR) months on enzalutamide. There were no responses to PARP inhibitor treatment. CONCLUSIONS: SPOP-mutant prostate cancers represent a unique subset with absent ERG fusions and frequent Wnt pathway alterations, with potentially greater dependency on androgen signaling and enhanced responsiveness to ADT. Outcomes are best for SPOP-altered patients without other concurrent mutations.


Assuntos
Antagonistas de Receptores de Andrógenos/uso terapêutico , Proteínas Nucleares/genética , Neoplasias da Próstata , Proteínas Repressoras/genética , Serina Endopeptidases/genética , Progressão da Doença , Fusão Gênica/fisiologia , Sequenciamento de Nucleotídeos em Larga Escala/métodos , Humanos , Masculino , Pessoa de Meia-Idade , Mutação de Sentido Incorreto , Intervalo Livre de Progressão , Neoplasias da Próstata/tratamento farmacológico , Neoplasias da Próstata/genética , Neoplasias da Próstata/patologia , Regulador Transcricional ERG/genética , Resultado do Tratamento , Via de Sinalização Wnt/fisiologia
2.
J Neuropathol Exp Neurol ; 80(9): 821-829, 2021 09 27.
Artigo em Inglês | MEDLINE | ID: mdl-34363682

RESUMO

Polymorphous low-grade neuroepithelial tumor of the young (PLNTY) is a recently described epileptogenic tumor characterized by oligodendroglioma-like components, aberrant CD34 expression, and frequent mitogen-activated protein kinase (MAPK) pathway activation. We molecularly profiled 13 cases with diagnostic histopathological features of PLNTY (10 female; median age, 16 years; range, 5-52). Patients frequently presented with seizures (9 of 12 with available history) and temporal lobe tumors (9 of 13). MAPK pathway activating alterations were identified in all 13 cases. Fusions were present in the 7 youngest patients: FGFR2-CTNNA3 (n = 2), FGFR2-KIAA1598 (FGFR2-SHTN1) (n = 1), FGFR2-INA (n = 1), FGFR2-MPRIP (n = 1), QKI-NTRK2 (n = 1), and KIAA1549-BRAF (n = 1). BRAF V600E mutation was present in 6 patients (17 years or older). Two fusion-positive cases additionally harbored TP53/RB1 abnormalities suggesting biallelic inactivation. Copy number changes predominantly involving whole chromosomes were observed in all 10 evaluated cases, with losses of chromosome 10q occurring with FGFR2-KIAA1598 (SHTN1)/CTNNA3 fusions. The KIAA1549-BRAF and QKI-NTRK2 fusions were associated respectively with a 7q34 deletion and 9q21 duplication. This study shows that despite its name, PLNTY also occurs in older adults, who frequently show BRAF V600E mutation. It also expands the spectrum of the MAPK pathway activating alterations associated with PLNTY and demonstrates recurrent chromosomal copy number changes consistent with chromosomal instability.


Assuntos
Glicoproteínas de Membrana/metabolismo , Quinases de Proteína Quinase Ativadas por Mitógeno/metabolismo , Neoplasias Neuroepiteliomatosas/metabolismo , Receptor trkB/metabolismo , Convulsões/metabolismo , Adulto , Aneuploidia , Cromossomos Humanos Par 9/metabolismo , Feminino , Fusão Gênica/fisiologia , Humanos , Recidiva , Convulsões/genética , Fatores de Transcrição/metabolismo
3.
Virchows Arch ; 479(4): 795-802, 2021 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-34089379

RESUMO

Aneurysmal (ABC) and simple bone cysts (SBC) have been traditionally distinguished by radiological and histopathological features. However, there is some radiological and histopathological overlap between ABC and SBC. ABC is characterised by USP6 fusions while, recently, NFATC2 fusions have been found in a large proportion of SBC. Identifying these fusions may assist in confirming the diagnosis of either ABC or SBC. To elaborate the potential benefit of molecular testing, we report a prospective series of 19 consecutive bone cysts with comprehensive radiological, histopathological and molecular diagnostics. Integrating radiological, histopathological and molecular findings, 11 cysts were diagnosed as SBC and 8 as ABC. Radiologically, 6 of 11 SBC and 6 of 8 ABC were diagnosed as ABC. Fibrin-like collagen deposits were identified in 8 of 11 (73%) SBC and 3 of 8 (38%) ABC. Nodular fasciitis-like areas were identified in 6 of 8 (75%) ABC and in 7 of 11 (64%) SBC. A USP6 fusion was identified in all 8 ABC, including a novel RBM5-USP6 fusion. An NFATC2 fusion was found in 7 of 11 SBC (FUS-NFATC2 fusion in 5 and EWSR1-NFATC2 in 2 cases). There is radiological and histopathological overlap between SBC and ABC in a significant proportion of cases. A diagnosis of ABC is frequently suggested radiologically in SBC, and fibrin-like deposits, thought to be specific for SBC, may be found in some ABC. Molecular testing may significantly improve diagnostic accuracy in bone cysts.


Assuntos
Cistos Ósseos Aneurismáticos/diagnóstico , Cistos Ósseos/diagnóstico , Adolescente , Adulto , Cistos Ósseos/metabolismo , Cistos Ósseos Aneurismáticos/metabolismo , Proteínas de Ciclo Celular/metabolismo , Criança , Proteínas de Ligação a DNA/genética , Proteínas de Ligação a DNA/metabolismo , Fasciite/patologia , Feminino , Fusão Gênica/fisiologia , Humanos , Hibridização in Situ Fluorescente/métodos , Masculino , Pessoa de Meia-Idade , Fatores de Transcrição NFATC/genética , Fatores de Transcrição NFATC/metabolismo , Patologia Molecular/métodos , Regiões Promotoras Genéticas/genética , Estudos Prospectivos , Proteínas de Ligação a RNA/metabolismo , Proteínas Supressoras de Tumor/metabolismo , Ubiquitina Tiolesterase/genética , Ubiquitina Tiolesterase/metabolismo
4.
J Cancer Res Clin Oncol ; 147(2): 323-337, 2021 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-33387037

RESUMO

The incidence of papillary thyroid cancer (PTC), the major type of thyroid cancer, is increasing rapidly around the world, and its pathogenesis is still unclear. There is poor prognosis for PTC involved in rapidly progressive tumors and resistance to radioiodine therapy. Kinase gene fusions have been discovered to be present in a wide variety of malignant tumors, and an increasing number of novel types have been detected in PTC, especially progressive tumors. As a tumor-driving event, kinase fusions are constitutively activated or overexpress their kinase function, conferring oncogenic potential, and their frequency is second only to BRAFV600E mutation in PTC. Diverse forms of kinase fusions have been observed and are associated with specific pathological features of PTC (usually at an advanced stage), and clinical trials of therapeutic strategies targeting kinase gene fusions are feasible for radioiodine-resistant PTC. This review summarizes the roles of kinase gene fusions in PTC and the value of clinical therapy of targeting fusions in progressive or refractory PTC, and discusses the future perspectives and challenges related to kinase gene fusions in PTC patients.


Assuntos
Fusão Gênica , Proteínas Quinases/genética , Câncer Papilífero da Tireoide/genética , Neoplasias da Glândula Tireoide/genética , Quinase do Linfoma Anaplásico/genética , Fusão Gênica/efeitos dos fármacos , Fusão Gênica/fisiologia , Humanos , Inibidores de Proteínas Quinases/uso terapêutico , Proteínas Proto-Oncogênicas B-raf/genética , Proteínas Proto-Oncogênicas c-ret/genética , Receptor trkA/genética , Câncer Papilífero da Tireoide/tratamento farmacológico , Neoplasias da Glândula Tireoide/tratamento farmacológico
5.
Virchows Arch ; 474(5): 619-623, 2019 May.
Artigo em Inglês | MEDLINE | ID: mdl-30666415

RESUMO

We report the first patient (a 13-year-old girl) with a sinonasal low-grade non-intestinal-type adenocarcinoma showing aberrant CDX2 expression both within morular areas and in the tubular component and demonstrate for the first time a SYN2-PPARG gene fusion in this tumor type. The tumor arose from the nasal septum and had not spread beyond the nasal cavity.


Assuntos
Fator de Transcrição CDX2/metabolismo , Cavidade Nasal/patologia , PPAR gama/metabolismo , Neoplasias dos Seios Paranasais/patologia , Adenocarcinoma/diagnóstico , Adenocarcinoma/patologia , Adolescente , Biomarcadores Tumorais/metabolismo , Fator de Transcrição CDX2/genética , Feminino , Fusão Gênica/fisiologia , Proteínas de Homeodomínio/metabolismo , Humanos , Imuno-Histoquímica , Neoplasias dos Seios Paranasais/diagnóstico
7.
Int J Hematol ; 106(2): 269-281, 2017 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-28378055

RESUMO

ZNF384-related fusion genes are associated with a distinct subgroup of B-cell precursor acute lymphoblastic leukemias in childhood, with a frequency of approximately 3-4%. We previously identified a novel EP300-ZNF384 fusion gene. Patients with the ZNF384-related fusion gene exhibit a hematopoietic stem cell (HSC) gene expression signature and characteristic immunophenotype with negative or low expression of CD10 and aberrant expression of myeloid antigens, such as CD33 and CD13. However, the molecular basis of this pathogenesis remains completely unknown. In the present study, we examined the biological effects of EP300-ZNF384 expression induced by retrovirus-mediated gene transduction in an REH B-cell precursor acute lymphoblastic leukemia cell line, and observed the acquisition of the HSC gene expression signature and an up-regulation of GATA3 gene expression, as assessed by microarray analysis. In contrast, the gene expression profile induced by wild-type ZNF384 in REH cells was significantly different from that by EP300-ZNF384 expression. Together with the results of reporter assays, which revealed the enhancement of GATA3-promoter activity by EP300-ZNF384 expression, these findings suggest that EP300-ZNF384 mediates GATA3 gene expression and may be involved in the acquisition of the HSC gene expression signature and characteristic immunophenotype in B-cell precursor acute lymphoblastic leukemia cells.


Assuntos
Proteína p300 Associada a E1A/genética , Fator de Transcrição GATA3/genética , Regulação da Expressão Gênica no Desenvolvimento/genética , Expressão Gênica/genética , Fusão Gênica/genética , Células-Tronco Hematopoéticas , Leucemia de Células B/genética , Leucemia-Linfoma Linfoblástico de Células Precursoras/genética , Transativadores/genética , Regulação para Cima/genética , Linhagem Celular Tumoral , Criança , Proteína p300 Associada a E1A/fisiologia , Fusão Gênica/fisiologia , Humanos , Leucemia de Células B/imunologia , Leucemia-Linfoma Linfoblástico de Células Precursoras/imunologia , Transativadores/fisiologia
8.
J Pathol ; 242(3): 347-357, 2017 07.
Artigo em Inglês | MEDLINE | ID: mdl-28418072

RESUMO

Acute basophilic leukaemia (ABL) is a rare subtype of acute myeloblastic leukaemia. We previously described a recurrent t(X;6)(p11;q23) translocation generating an MYB-GATA1 fusion gene in male infants with ABL. To better understand its role, the chimeric MYB-GATA1 transcription factor was expressed in CD34-positive haematopoietic progenitors, which were transplanted into immunodeficient mice. Cells expressing MYB-GATA1 showed increased expression of markers of immaturity (CD34), of granulocytic lineage (CD33 and CD117), and of basophilic differentiation (CD203c and FcϵRI). UT-7 cells also showed basophilic differentiation after MYB-GATA1 transfection. A transcriptomic study identified nine genes deregulated by both MYB-GATA1 and basophilic differentiation. Induction of three of these genes (CCL23, IL1RL1, and NTRK1) was confirmed in MYB-GATA1-expressing CD34-positive cells by reverse transcription quantitative polymerase chain reaction. Interleukin (IL)-33 and nerve growth factor (NGF), the ligands of IL-1 receptor-like 1 (IL1RL1) and neurotrophic receptor tyrosine kinase 1 (NTRK1), respectively, enhanced the basophilic differentiation of MYB-GATA1-expressing UT-7 cells, thus demonstrating the importance of this pathway in the basophilic differentiation of leukaemic cells and CD34-positive primary cells. Finally, gene reporter assays confirmed that MYB and MYB-GATA1 directly activated NTRK1 and IL1RL1 transcription, leading to basophilic skewing of the blasts. MYB-GATA1 is more efficient than MYB, because of better stability. Our results highlight the role of IL-33 and NGF receptors in the basophilic differentiation of normal and leukaemic cells. Copyright © 2017 Pathological Society of Great Britain and Ireland. Published by John Wiley & Sons, Ltd.


Assuntos
Interleucina-33/fisiologia , Leucemia Basofílica Aguda/etiologia , Receptores de Fator de Crescimento Neural/fisiologia , Animais , Transformação Celular Neoplásica/genética , Feminino , Fator de Transcrição GATA1/genética , Fusão Gênica/fisiologia , Células-Tronco Hematopoéticas/fisiologia , Masculino , Camundongos SCID , Transplante de Neoplasias , Proteínas Oncogênicas v-myb/genética , Receptor trkA/metabolismo , Fatores de Transcrição/metabolismo , Transfecção , Transplante Heterólogo
9.
PLoS One ; 11(7): e0159028, 2016.
Artigo em Inglês | MEDLINE | ID: mdl-27415830

RESUMO

Repetitive elements (REs) comprise 40-60% of the mammalian genome and have been shown to epigenetically influence the expression of genes through the formation of fusion transcript (FTs). We previously showed that an intracisternal A particle forms an FT with the agouti gene in mice, causing obesity/type 2 diabetes. To determine the frequency of FTs genome-wide, we developed a TopHat-Fusion-based analytical pipeline to identify FTs with high specificity. We applied it to an RNA-seq dataset from the nucleus accumbens (NAc) of mice repeatedly exposed to cocaine. Cocaine was previously shown to increase the expression of certain REs in this brain region. Using this pipeline that can be applied to single- or paired-end reads, we identified 438 genes expressing 813 different FTs in the NAc. Although all types of studied repeats were present in FTs, simple sequence repeats were underrepresented. Most importantly, reverse-transcription and quantitative PCR validated the expression of selected FTs in an independent cohort of animals, which also revealed that some FTs are the prominent isoforms expressed in the NAc by some genes. In other RNA-seq datasets, developmental expression as well as tissue specificity of some FTs differed from their corresponding non-fusion counterparts. Finally, in silico analysis predicted changes in the structure of proteins encoded by some FTs, potentially resulting in gain or loss of function. Collectively, these results indicate the robustness of our pipeline in detecting these new isoforms of genes, which we believe provides a valuable tool to aid in better understanding the broad role of REs in mammalian cellular biology.


Assuntos
Éxons/genética , Fusão Gênica/genética , Sequências Repetitivas Dispersas/genética , Análise de Sequência de RNA/métodos , Animais , Cocaína/farmacologia , Éxons/fisiologia , Regulação da Expressão Gênica/efeitos dos fármacos , Fusão Gênica/fisiologia , Sequências Repetitivas Dispersas/fisiologia , Masculino , Camundongos , Camundongos Endogâmicos C57BL , Núcleo Accumbens/efeitos dos fármacos , Núcleo Accumbens/metabolismo , Reação em Cadeia da Polimerase , Sensibilidade e Especificidade
10.
Transgenic Res ; 24(6): 945-53, 2015 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-26138876

RESUMO

Wax esters are hydrophobic lipids consisting of a fatty acid moiety linked to a fatty alcohol with an ester bond. Plant-derived wax esters are today of particular concern for their potential as cost-effective and sustainable sources of lubricants. However, this aspect is hampered by the fact that the level of wax esters in plants generally is too low to allow commercial exploitation. To investigate whether wax ester biosynthesis can be increased in plants using transgenic approaches, we have here exploited a fusion between two bacterial genes together encoding a single wax ester-forming enzyme, and targeted the resulting protein to chloroplasts in stably transformed tobacco (Nicotiana benthamiana) plants. Compared to wild-type controls, transgenic plants showed both in leaves and stems a significant increase in the total level of wax esters, being eight-fold at the whole plant level. The profiles of fatty acid methyl ester and fatty alcohol in wax esters were related, and C16 and C18 molecules constituted predominant forms. Strong transformants displayed certain developmental aberrations, such as stunted growth and chlorotic leaves and stems. These negative effects were associated with an accumulation of fatty alcohols, suggesting that an adequate balance between formation and esterification of fatty alcohols is crucial for a high wax ester production. The results show that wax ester engineering in transgenic plants is feasible, and suggest that higher yields may become achieved in the near future.


Assuntos
Aciltransferases/metabolismo , Aldeído Oxirredutases/metabolismo , Ésteres/metabolismo , Fusão Gênica/fisiologia , Nicotiana/metabolismo , Plantas Geneticamente Modificadas/metabolismo , Ceras/metabolismo , Aciltransferases/genética , Aldeído Oxirredutases/genética , Fenótipo , Folhas de Planta/genética , Folhas de Planta/metabolismo , Plantas Geneticamente Modificadas/genética , Plantas Geneticamente Modificadas/crescimento & desenvolvimento , Nicotiana/genética , Nicotiana/crescimento & desenvolvimento
11.
J Biol Chem ; 288(17): 11718-30, 2013 Apr 26.
Artigo em Inglês | MEDLINE | ID: mdl-23439648

RESUMO

Neisseria meningitidis (Nm) is a leading cause of bacterial meningitis and sepsis. Crucial virulence determinants of pathogenic Nm strains are the polysaccharide capsules that support invasion by hindering complement attack. In NmW-135 and NmY the capsules are built from the repeating units (→ 6)-α-D-Gal-(1 → 4)-α-Neu5Ac-(2 →)n and (→ 6)-α-D-Glc-(1 → 4)-α-Neu5Ac-(2 →)n, respectively. These unusual heteropolymers represent unique examples of a conjugation between sialic acid and hexosyl-sugars in a polymer chain. Moreover, despite the various catalytic strategies needed for sialic acid and hexose transfer, single enzymes (SiaDW-135/Y) have been identified to form these heteropolymers. Here we used SiaDW-135 as a model system to delineate structure-function relationships. In size exclusion chromatography active SiaDW-135 migrated as a monomer. Fold recognition programs suggested two separate glycosyltransferase domains, both containing a GT-B-fold. Based on conserved motifs predicted folds could be classified as a hexosyl- and sialyltransferase. To analyze enzyme properties and interplay of the two identified glycosyltransferase domains, saturation transfer difference NMR and mutational studies were carried out. Simultaneous and independent binding of UDP-Gal and CMP-Sia was seen in the absence of an acceptor as well as when the catalytic cycle was allowed to proceed. Enzyme variants with only one functionality were generated by site-directed mutagenesis and shown to complement each other in trans when combined in an in vitro test system. Together the data strongly suggests that SiaDW-135 has evolved by fusion of two independent ancestral genes encoding sialyl- and galactosyltransferase activity.


Assuntos
Cápsulas Bacterianas/metabolismo , Proteínas de Bactérias/metabolismo , Evolução Molecular , Neisseria meningitidis Sorogrupo W-135/enzimologia , Polissacarídeos Bacterianos/biossíntese , Sialiltransferases/metabolismo , Cápsulas Bacterianas/química , Cápsulas Bacterianas/genética , Proteínas de Bactérias/química , Proteínas de Bactérias/genética , Fusão Gênica/fisiologia , Humanos , Meningite Meningocócica/enzimologia , Meningite Meningocócica/genética , Meningite Meningocócica/patologia , Mutagênese Sítio-Dirigida , Neisseria meningitidis Sorogrupo W-135/genética , Neisseria meningitidis Sorogrupo W-135/patogenicidade , Polissacarídeos Bacterianos/química , Polissacarídeos Bacterianos/genética , Estrutura Terciária de Proteína , Sepse/enzimologia , Sepse/genética , Sepse/patologia , Sialiltransferases/química , Sialiltransferases/genética , Uridina Difosfato Galactose/química , Uridina Difosfato Galactose/genética , Uridina Difosfato Galactose/metabolismo
13.
Blood ; 119(26): 6187-97, 2012 Jun 28.
Artigo em Inglês | MEDLINE | ID: mdl-22493298

RESUMO

Chromosomal aberrations are an important consequence of genotoxic exposure and contribute to pathogenesis and progression of several malignancies. We investigated the susceptibility to chromosomal aberrations in chronic myelogenous leukemia (CML) progenitors after exposure to ionizing radiation. In normal progenitors, ionizing radiation induced both stable and unstable chromosomal lesions, but only stable aberrations persisted after multiple divisions. In contrast, radiation of chronic phase CML progenitors resulted in enhanced generation of unstable lesions that persisted after multiple divisions. CML progenitors demonstrated active cell cycle checkpoints and increased nonhomologous end joining DNA repair, suggesting that persistence of unstable aberrations was the result of continued generation of these lesions. CML progenitors demonstrated enhanced susceptibility to repeated cycles of chromosome damage, repair, and damage through a breakage-fusion-bridge mechanism. Perpetuation of breakage-fusion-bridge cycles in CML progenitors was mediated by classic nonhomologous end joining repair. These studies reveal a previously unrecognized mechanism of chromosomal instability in leukemia progenitors because of continued generation of unstable chromosomal lesions through repeated cycles of breakage and repair of such lesions.


Assuntos
Instabilidade Cromossômica/genética , Quebra Cromossômica , Reparo do DNA por Junção de Extremidades/fisiologia , Fusão Gênica/fisiologia , Leucemia Mielogênica Crônica BCR-ABL Positiva/patologia , Células-Tronco Neoplásicas/metabolismo , Antígenos CD34/metabolismo , Pontos de Checagem do Ciclo Celular/genética , Pontos de Checagem do Ciclo Celular/fisiologia , Pontos de Checagem do Ciclo Celular/efeitos da radiação , Linhagem Celular Tumoral , Instabilidade Cromossômica/efeitos da radiação , Quebra Cromossômica/efeitos da radiação , Dano ao DNA/fisiologia , Reparo do DNA por Junção de Extremidades/genética , Reparo do DNA por Junção de Extremidades/efeitos da radiação , Fusão Gênica/efeitos da radiação , Humanos , Hibridização in Situ Fluorescente , Leucemia Mielogênica Crônica BCR-ABL Positiva/genética , Modelos Biológicos , Células-Tronco Neoplásicas/efeitos da radiação , Radiação Ionizante , Recidiva
15.
Bull Cancer ; 98(12): 1403-18, 2011 Dec.
Artigo em Francês | MEDLINE | ID: mdl-22157699

RESUMO

Oncogenesis is correlated with the occurrence of multiple genomic events allowing cancer cells to acquire new properties, including the capacity of survival and proliferation with down regulated control signals. Among those genomic events, the study of recurrent translocations, particularly common in oncohematology, has allowed for a better understanding of leucemogenesis and lymphomagenesis mechanisms. These translocations are classically distinguished depending on their physiopathologic consequences. It may encode for a fusion gene leading to a chimeric protein, which exhibits a new activity or an aberrant one, corresponding in most cases to the constitutive activation of a proto-oncogene. In other cases, these translocations may cause abnormal expression of a proto-oncogene with a regular structure by a transcriptional deregulation. Beyond this highlighting recurrent translocations and understanding better the physiopathologic consequences of these chromosomal modifications has a real impact on patients. These cytogenetic anomalies represent an essential diagnostic tool for some hematologies; and pave the way for a better evaluation of the prognosis and thus, a better adaptation of the therapeutic strategy. They also contributed to improve survival with the development of targeted therapies. Finally, thanks to cytogenetic techniques combined to molecular biology techniques, cytogenetic aberrations can be used as a marker of response, which allowed a monitoring of residual disease.


Assuntos
Leucemia/genética , Linfoma/genética , Translocação Genética/genética , Expressão Gênica/genética , Fusão Gênica/fisiologia , Humanos , Leucemia/diagnóstico , Leucemia/fisiopatologia , Leucemia/terapia , Linfoma/diagnóstico , Linfoma/fisiopatologia , Linfoma/terapia , Proto-Oncogene Mas , Proto-Oncogenes/fisiologia , Proteínas Recombinantes de Fusão/genética , Ativação Transcricional , Translocação Genética/fisiologia
16.
PLoS One ; 6(11): e27302, 2011.
Artigo em Inglês | MEDLINE | ID: mdl-22096548

RESUMO

Regulation of protein activity is central to the complexity of life. The ability to regulate protein activity through exogenously added molecules has biotechnological/biomedical applications and offers tools for basic science. Such regulation can be achieved by establishing a means to modulate the specific activity of the protein (i.e. allostery). An alternative strategy for intracellular regulation of protein activity is to control the amount of protein through effects on its production, accumulation, and degradation. We have previously demonstrated that the non-homologous recombination of the genes encoding maltose binding protein (MBP) and TEM1 ß-lactamase (BLA) can result in fusion proteins in which ß-lactamase enzyme activity is allosterically regulated by maltose. Here, through use of a two-tiered genetic selection scheme, we demonstrate that such recombination can result in genes that confer maltose-dependent resistance to ß-lactam even though they do not encode allosteric enzymes. These 'phenotypic switch' genes encode fusion proteins whose accumulation is a result of a specific interaction with maltose. Phenotypic switches represent an important class of proteins for basic science and biotechnological applications in vivo.


Assuntos
Engenharia de Proteínas/métodos , Recombinação Genética/genética , Regulação Alostérica , Ativação Enzimática/efeitos dos fármacos , Escherichia coli/genética , Escherichia coli/metabolismo , Fusão Gênica/genética , Fusão Gênica/fisiologia , Maltose/farmacologia , Proteínas Ligantes de Maltose/genética , Proteínas Ligantes de Maltose/metabolismo , beta-Lactamases/genética , beta-Lactamases/metabolismo
17.
FEBS Lett ; 585(17): 2627-34, 2011 Sep 02.
Artigo em Inglês | MEDLINE | ID: mdl-21827754

RESUMO

Silica glass formation in diatoms requires the biosynthesis of unusual, very long chain polyamines (LCPA) composed of iterated aminopropyl units. Diatoms processively synthesize LCPA, N-methylate the amine groups and transfer concatenated, N-dimethylated aminopropyl groups to silaffin proteins. Here I show that diatom genomes possess signal peptide-containing gene fusions of bacterially-derived polyamine biosynthetic enzymes S-adenosylmethionine decarboxylase (AdoMetDC) and an aminopropyltransferase, sometimes fused to a eukaryotic histone N-methyltransferase domain, that potentially synthesize and N-methylate LCPA. Fusions of similar, alternatively configured domains but with a catalytically dead AdoMetDC and in one case a Tudor domain, may N-dimethylate and transfer multiple aminopropyl unit polyamines onto silaffin proteins.


Assuntos
Proteínas de Bactérias/química , Diatomáceas/enzimologia , Diatomáceas/metabolismo , Fusão Gênica/fisiologia , Poliaminas/metabolismo , Adenosilmetionina Descarboxilase/química , Adenosilmetionina Descarboxilase/classificação , Adenosilmetionina Descarboxilase/genética , Adenosilmetionina Descarboxilase/metabolismo , Proteínas de Bactérias/classificação , Proteínas de Bactérias/genética , Fusão Gênica/genética , Histona Metiltransferases , Histona-Lisina N-Metiltransferase/química , Histona-Lisina N-Metiltransferase/classificação , Histona-Lisina N-Metiltransferase/genética , Histona-Lisina N-Metiltransferase/metabolismo , Filogenia , Poliaminas/química , Espermidina Sintase/química , Espermidina Sintase/classificação , Espermidina Sintase/genética , Espermidina Sintase/metabolismo
18.
Wei Sheng Wu Xue Bao ; 50(4): 517-23, 2010 Apr.
Artigo em Chinês | MEDLINE | ID: mdl-20560356

RESUMO

OBJECTIVE: To construct prokaryotic fusion gene expression vector pET-30a/ltB-porB, express the recombinant fusion protein LTB-PorB and analyze the immunocompetence of the recombinant fusion protein in female BALB/c mice through intranasally immunization. METHODS: B subunit of Escherichia coli heat-labile enterotoxin (LTB) and Neisseria gonorrhoeae Porin B (PorB) fusion gene, LTB gene and PorB gene were cloned into prokaryotic vector pET-30a. The recombinants were identified by Polymerase Chain Reaction (PCR), enzyme digestion and DNA sequencing, and then expressed efficiently in Escherichia coli BL21 in the form of inclusion bodies. The renatured recombinant proteins had antigenicity, which was confirmed by Western blot. Female BALB/c mice were inoculated with renatured recombinant proteins without endotoxin through intranasally immunization at the days 0, 14, 28. Next, humoral immunoresponse and cellullar immunologic response were detected in female BALB/c mice by enzyme linked immunosorbent assay (ELISA) and methyl thiazolyl tetrazolium( MTT) colorimetric assay. RESULTS: The level of PorB specific sIgA in genital tract and IgG in serum shown upward trend along with the days post innoculation in LTB-PorB group, A450 of sIgA in LTB-PorB group was 0.66 at the day 42, which was significantly higher than controls (P < 0.01), and the titer was up to 1:1280. A450 of serum IgG in LTB-PorB group was 0.60 at the day 28, which was significantly higher than the LTB and the Solution Buffer controls (P < 0.01), and the titer was up to 1:2560. However, the IgG between LTB-PorB group and PorB control (A450 :0.57) had no significant difference (P > 0.05). Stimulation index of the splenic lymphocyte in LTB-PorB group was significantly higher than the LTB and the Solution Buffer controls (P < 0.05). But the level of IFN-gamma induced by splenic lymphocyte between LTB-PorB group and controls had no significant difference (P > 0.05). CONCLUSION: The recombinant fusion protein LTB-PorB could induce high level of humoral immunoresponse and slightly cellullar immunologic response in female BALB/c mice through intranasally immunization. For the first time to our knowledge, the mucosal adjuvant LTB could assist PorB to induce high level of mucosal immune response in the genital tract mucosa of mice.


Assuntos
Escherichia coli/genética , Regulação Bacteriana da Expressão Gênica/fisiologia , Fusão Gênica/imunologia , Imunocompetência/genética , Neisseria gonorrhoeae/genética , Animais , Anticorpos Antibacterianos , Antígenos de Bactérias , Enterotoxinas/genética , Escherichia coli/imunologia , Escherichia coli/metabolismo , Proteínas de Escherichia coli/genética , Proteínas de Escherichia coli/imunologia , Fusão Gênica/fisiologia , Imunocompetência/imunologia , Camundongos , Camundongos Endogâmicos BALB C , Neisseria gonorrhoeae/imunologia , Neisseria gonorrhoeae/metabolismo
19.
Zhong Nan Da Xue Xue Bao Yi Xue Ban ; 33(2): 110-4, 2008 Feb.
Artigo em Chinês | MEDLINE | ID: mdl-18326904

RESUMO

OBJECTIVE: To construct hypoxia/radiation inducible promotor HRE1.Egr-1, and to observe its promotive effect on the expression of yCDglyTK gene in nasopharyngeal cancer HNE-1 cells and the anti-tumor effect of yCDglyTK and to lay an experimental foundation for further exploration of new gene-radio therapy of nasopharyngeal cancer. METHODS: pcDNA3.1(-)HRE1.Egr-1.yCDglyTK was constructed by gene recombination technique. Stable yCDglyTK-expressing HNE-1 cells were generated by transfecting the recombinant plasmid into the target cells with liposome. The expression of yCDglyTK was detected by Western blot in 4 groups: a normoxia group, a radiation group, a hypoxia group, and a hypoxia and radiation group. The killing effect of 5-FC in different circumstances was determined by MTT. RESULTS: The expression of yCDglyTK/5-FC gene in all the groups was significantly different(P<0.01),especially in the hypoxia and radiation group. The killing effect of 5-FC on HNE1 cells varied under different conditions, especially in the hypoxia and radiation group. CONCLUSION: Hypoxia and radiation can induce the activity of fusion promoter HRE1.Egr-1, and obviously promote the anti-tumor effect of yCDglyTK/5-FC system, suggesting that yCDglyTK may be a candidate suicide gene for gene-radio therapy of NPC.


Assuntos
Proteína 1 de Resposta de Crescimento Precoce/genética , Fusão Gênica/fisiologia , Terapia Genética/métodos , Subunidade alfa do Fator 1 Induzível por Hipóxia/genética , Neoplasias Nasofaríngeas/terapia , Flucitosina/farmacologia , Humanos , Neoplasias Nasofaríngeas/genética , Neoplasias Nasofaríngeas/radioterapia , Elementos de Resposta/genética , Timidina Quinase/genética , Timidina Quinase/metabolismo , Células Tumorais Cultivadas
20.
Virology ; 369(1): 19-34, 2007 Dec 05.
Artigo em Inglês | MEDLINE | ID: mdl-17698161

RESUMO

During serial passaging of rubella virus (RUB) in cell culture, the dominant species of defective-interfering RNA (DI) generated contains an in-frame deletion between the capsid protein (C) gene and E1 glycoprotein gene resulting in production of a C-E1 fusion protein that is necessary for the maintenance of the DI [Tzeng, W.P., Frey, T.K. (2006). C-E1 fusion protein synthesized by rubella virus DI RNAs maintained during serial passage. Virology 356 198-207.]. A BHK cell line stably expressing the RUB structural proteins was established which was used to package DIs into virus particles following transfection with in vitro transcripts from DI infectious cDNA constructs. Packaging of a DI encoding an in-frame C-GFP-E1 reporter fusion protein corresponding to the C-E1 fusion protein expressed in a native DI was only marginally more efficient than packaging of a DI encoding GFP, indicating that the C-E1 fusion protein did not function by enhancing packaging. However, infection with the DI encoding the C-GFP-E1 fusion protein (in the absence of wt RUB helper virus) resulted in formation of clusters of GFP-positive cells and the percentage of GFP-positive cells in the culture following infection remained relatively constant. In contrast, a DI encoding GFP did not form GFP-positive clusters and the percentage of GFP-positive cells declined by roughly half from 2 to 4 days post-infection. Cluster formation and sustaining the percentage of infected (GFP-positive) cells required the C part of the fusion protein, including the downstream but not the upstream of two arginine clusters (both of which are associated with RNA binding and association with mitochondrial p32 protein) and the E1 part through the transmembrane sequence, but not the C-terminal cytoplasmic tail. Among a collection of mutant DI constructs, cluster formation and sustaining infected cell percentage correlated with maintenance during serial passage with wt RUB. We hypothesize that cluster formation and sustaining infected cell percentage increase the likelihood of co-infection by a DI and wt RUB during serial passage thus enhancing maintenance of the DI. Cluster formation and sustaining infected cell percentage were found to be due to a combination of attenuated cytopathogenicity of DIs that express the C-E1 fusion protein and cell-to-cell movement of the DI. In infected cells, the C-GFP-E1 fusion protein was localized to potentially novel vesicular structures that appear to originate from ER-Golgi transport vacuoles. This species of DI expressing a C-E1 fusion protein that exhibits attenuated cytopathogenicity and the ability to increase the number of infected cells through cell-to-cell movement could be the basis for development of an attractive vaccine vector.


Assuntos
Vírus Defeituosos/crescimento & desenvolvimento , Fusão Gênica/fisiologia , Proteínas Mutantes Quiméricas/fisiologia , Vírus da Rubéola/crescimento & desenvolvimento , Proteínas do Core Viral/fisiologia , Proteínas do Envelope Viral/fisiologia , Animais , Linhagem Celular , Cricetinae , Efeito Citopatogênico Viral , Vírus Defeituosos/genética , Vírus Defeituosos/patogenicidade , Fusão Gênica/genética , Genes Reporter , Proteínas de Fluorescência Verde/genética , Proteínas de Fluorescência Verde/metabolismo , Proteínas Mutantes Quiméricas/análise , Proteínas Mutantes Quiméricas/genética , Proteínas Recombinantes de Fusão/genética , Proteínas Recombinantes de Fusão/metabolismo , Vírus da Rubéola/patogenicidade , Inoculações Seriadas , Vesículas Transportadoras/química , Proteínas do Core Viral/genética , Proteínas do Envelope Viral/genética , Proteínas Estruturais Virais/análise , Proteínas Estruturais Virais/genética , Proteínas Estruturais Virais/fisiologia , Montagem de Vírus/genética , Montagem de Vírus/fisiologia
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