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1.
New Phytol ; 239(5): 1989-2006, 2023 09.
Artigo em Inglês | MEDLINE | ID: mdl-37329247

RESUMO

Legume nodules produce large quantities of heme required for the synthesis of leghemoglobin (Lb) and other hemoproteins. Despite the crucial function of Lb in nitrogen fixation and the toxicity of free heme, the mechanisms of heme homeostasis remain elusive. Biochemical, cellular, and genetic approaches were used to study the role of heme oxygenases (HOs) in heme degradation in the model legume Lotus japonicus. Heme and biliverdin were quantified and localized, HOs were characterized, and knockout LORE1 and CRISPR/Cas9 mutants for LjHO1 were generated and phenotyped. We show that LjHO1, but not the LjHO2 isoform, is responsible for heme catabolism in nodules and identify biliverdin as the in vivo product of the enzyme in senescing green nodules. Spatiotemporal expression analysis revealed that LjHO1 expression and biliverdin production are restricted to the plastids of uninfected interstitial cells. The nodules of ho1 mutants showed decreased nitrogen fixation, and the development of brown, rather than green, nodules during senescence. Increased superoxide production was observed in ho1 nodules, underscoring the importance of LjHO1 in antioxidant defense. We conclude that LjHO1 plays an essential role in degradation of Lb heme, uncovering a novel function of nodule plastids and uninfected interstitial cells in nitrogen fixation.


Assuntos
Lotus , Fixação de Nitrogênio , Fixação de Nitrogênio/genética , Lotus/metabolismo , Heme Oxigenase (Desciclizante)/genética , Heme Oxigenase (Desciclizante)/metabolismo , Biliverdina/metabolismo , Leghemoglobina/genética , Simbiose/genética , Nódulos Radiculares de Plantas/metabolismo , Proteínas de Plantas/genética , Proteínas de Plantas/metabolismo , Regulação da Expressão Gênica de Plantas
2.
Bioresour Technol ; 363: 127884, 2022 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-36067892

RESUMO

Soy leghemoglobin is a key food additive that imparts meaty flavor and color to meat analogs. Here, a Pichia pastoris strain capable of high-yield secretory production of functional leghemoglobin was developed through gene dosage optimization and heme pathway consolidation. First, multi-copy integration of LegH expression cassette was achieved via both post-transformational vector amplification and CRISPR/Cas9 mediated genome editing methods. A combination of inducible expression and constitutive expression resulted in the highest production of leghemoglobin. Then, heme biosynthetic pathway was engineered to address challenges in heme depletion and leghemoglobin secretion. Finally, the disruption of ku70 was complemented in engineered P. pastoris strain to enable high-density fermentation in a 10-L bioreactor. These engineering strategies increased the secretion of leghemoglobin by more than 83-fold, whose maximal leghemoglobin titer and heme binding ratio reached as high as 3.5 g/L and 93 %, respectively. This represents the highest secretory production of heme-containing proteins ever reported.


Assuntos
Leghemoglobina , Pichia , Aditivos Alimentares/metabolismo , Globinas/metabolismo , Heme/metabolismo , Leghemoglobina/genética , Leghemoglobina/metabolismo , Pichia/genética , Pichia/metabolismo , Proteínas Recombinantes/metabolismo , Saccharomycetales
3.
Molecules ; 26(23)2021 Nov 28.
Artigo em Inglês | MEDLINE | ID: mdl-34885789

RESUMO

Leghemoglobin (Lb) is an oxygen-binding plant hemoglobin of legume nodules, which participates in the symbiotic nitrogen fixation process. Another way to obtain Lb is its expression in bacteria, yeasts, or other organisms. This is promising for both obtaining Lb in the necessary quantity and scrutinizing it in model systems, e.g., its interaction with reactive oxygen (ROS) and nitrogen (RNS) species. The main goal of the work was to study how Lb expression affected the ability of Escherichia coli cells to tolerate oxidative and nitrosative stress. The bacterium E. coli with the embedded gene of soybean leghemoglobin a contains this protein in an active oxygenated state. The interaction of the expressed Lb with oxidative and nitrosative stress inducers (nitrosoglutathione, tert-butyl hydroperoxide, and benzylviologen) was studied by enzymatic methods and spectrophotometry. Lb formed NO complexes with heme-nitrosylLb or nonheme iron-dinitrosyl iron complexes (DNICs). The formation of Lb-bound DNICs was also detected by low-temperature electron paramagnetic resonance spectroscopy. Lb displayed peroxidase activity and catalyzed the reduction of organic peroxides. Despite this, E. coli-synthesized Lb were more sensitive to stress inducers. This might be due to the energy demand required by the Lb synthesis, as an alien protein consumes bacterial resources and thereby decreases adaptive potential of E. coli.


Assuntos
Escherichia coli/metabolismo , Glycine max/metabolismo , Leghemoglobina/metabolismo , Estresse Oxidativo , Proteínas de Plantas/metabolismo , Escherichia coli/genética , Expressão Gênica , Genes de Plantas , Peróxido de Hidrogênio/metabolismo , Leghemoglobina/genética , Compostos Nitrosos/metabolismo , Proteínas de Plantas/genética , Glycine max/genética
4.
Science ; 374(6567): 625-628, 2021 Oct 29.
Artigo em Inglês | MEDLINE | ID: mdl-34709882

RESUMO

Leghemoglobins enable the endosymbiotic fixation of molecular nitrogen (N2) in legume nodules by channeling O2 for bacterial respiration while maintaining a micro-oxic environment to protect O2-sensitive nitrogenase. We found that the NIN-like protein (NLP) transcription factors NLP2 and NIN directly activate the expression of leghemoglobins through a promoter motif, resembling a "double" version of the nitrate-responsive elements (NREs) targeted by other NLPs, that has conserved orientation and position across legumes. CRISPR knockout of the NRE-like element resulted in strongly decreased expression of the associated leghemoglobin. Our findings indicate that the origins of the NLP-leghemoglobin module for O2 buffering in nodules can be traced to an ancient pairing of NLPs with nonsymbiotic hemoglobins that function in hypoxia.


Assuntos
Regulação da Expressão Gênica de Plantas , Leghemoglobina/genética , Medicago truncatula/genética , Nódulos Radiculares de Plantas/metabolismo , Fatores de Transcrição/metabolismo , Fabaceae/genética , Fabaceae/metabolismo , Leghemoglobina/química , Medicago truncatula/metabolismo , Fixação de Nitrogênio , Oxigênio/metabolismo , Proteínas de Plantas/genética , Proteínas de Plantas/metabolismo , Nodulação , Regiões Promotoras Genéticas , Simbiose , Fatores de Transcrição/genética
5.
Regul Toxicol Pharmacol ; 119: 104817, 2021 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-33171209

RESUMO

The production of soy leghemoglobin C2 (LegH) by Pichia pastoris (syn. K. phaffii) was developed by Impossible Foods to serve as a sustainable source of flavor and aroma in plant-based meats. The potential allergenicity and toxicity of a LegH from a new production process was analyzed using bioinformatics, proteomics and a pepsin digestion assay on leghemoglobin, and residual host proteins. LegH in the new preparation had the same proteoform as in the previous preparations as well as in soy root nodule extracts. Results of seven Pichia proteins, each representing ≥1% of the total protein content, showed no significant sequence matches to any known allergens with the exception of one, which matched the highly conserved wheat GAPDH, whose protein homolog is found in fungi and humans. Based on the data, it is unlikely that there is any risk of cross reactivity between LegH Prep and GAPDH. Pichia protein sequences showed very good alignment to homologous proteins from many common yeasts including Saccharomyces sp. In addition, LegH and Pichia proteins were all rapidly digested in a pepsin digest assay. In conclusion, LegH Prep from this P. pastoris production process is unlikely to pose a risk of food allergenicity.


Assuntos
Alérgenos/toxicidade , Proteínas Fúngicas/toxicidade , Gliceraldeído-3-Fosfato Desidrogenase (Fosforiladora)/toxicidade , Leghemoglobina/toxicidade , Saccharomycetales/genética , Alérgenos/química , Alérgenos/genética , Sequência de Aminoácidos , Hipersensibilidade Alimentar , Proteínas Fúngicas/química , Proteínas Fúngicas/genética , Gliceraldeído-3-Fosfato Desidrogenase (Fosforiladora)/química , Gliceraldeído-3-Fosfato Desidrogenase (Fosforiladora)/genética , Leghemoglobina/química , Leghemoglobina/genética , Espectrometria de Massas , Proteômica
6.
BMC Plant Biol ; 20(1): 293, 2020 Jun 26.
Artigo em Inglês | MEDLINE | ID: mdl-32590947

RESUMO

BACKGROUND: Leguminous plants alter patterns of gene expression in response to symbiotic colonization and infection by their cognate rhizobial bacteria, but the extent of the transcriptomic response has rarely been examined below the species level. Here we describe the identification of 12 rhizobial biotypes of Ensifer meliloti, which form nitrogen-fixing nodules in the roots of alfalfa (Medicago sativa L.), followed by a comparative RNA-seq analysis of four alfalfa cultivars each inoculated with two E. meliloti strains varying in symbiotic performance and phylogenetic relatedness. RESULTS: Rhizobial biotypes were identified on the basis of their symbiotic performance, particularly shoot dry weight. Differentially expressed genes (DEGs) and metabolic pathways were determined by comparing the RNA-seq data with that of the uninoculated control plant. Significant differences were found between DEGs generated in each cultivar with the inoculation of two rhizobial strains in comparison (P < 0.01). A total of 8111 genes was differentially expressed, representing ~ 17.1% of the M. sativa genome. The proportion of DEGs ranges from 0.5 to 12.2% for each alfalfa cultivar. Interestingly, genes with predicted roles in flavonoid biosynthesis and plant-pathogen interaction (NBS-LRR) were identified as the most significant DEGs. Other DEGs include Medsa002106 and genes encoding nodulins and NCR peptides whose expression is specifically induced during the development of nitrogen-fixing nodules. More importantly, strong significant positive correlations were observed between plant transcriptomes (DEGs and KEGG pathways) and phylogenetic distances between the two rhizobial inoculants. CONCLUSIONS: Alfalfa expresses significantly distinct sets of genes in response to infection by different rhizobial strains at the below-species levels (i.e. biotype or strain). Candidate genes underlying the specific interactions include Medsa002106 and those encoding nodulins and NCR peptides and proteins in the NBS-LRR family.


Assuntos
Medicago sativa/genética , Sinorhizobium meliloti/fisiologia , Simbiose , Elementos de DNA Transponíveis , Flavonoides/biossíntese , Perfilação da Expressão Gênica , Glutamato-Amônia Ligase/genética , Leghemoglobina/genética , Medicago sativa/microbiologia , Tipagem Molecular , Fixação de Nitrogênio , Peptídeos/genética , RNA Bacteriano , RNA-Seq , Sinorhizobium meliloti/classificação , Sinorhizobium meliloti/genética , Sinorhizobium meliloti/isolamento & purificação
7.
Ann Bot ; 126(1): 61-72, 2020 06 19.
Artigo em Inglês | MEDLINE | ID: mdl-32297921

RESUMO

BACKGROUND AND AIMS: Efficient biological nitrogen fixation (BNF) requires leghaemoglobin (Lb) to modulate oxygen pressure in nodules. Excess N supply severely inhibits BNF through effects on Lb during nodulation. As yet, a systematic identification and characterization of Lb-encoding genes in soybean has not been reported. METHODS: The effects of N on BNF were studied in soybean plants inoculated with rhizobia and exposed to excess or low N availability in hydroponic cultures. To identify soybean Lb proteins, BLAST searches were performed on the Phytozome website. Bioinformatic analysis of identified GmLbs was then carried out to investigate gene structure, protein homology and phylogenetic relationships. Finally, quantitative real-time PCR was employed to analyse the expression patterns of soybean Lb genes in various tissues and in response to high N availability. KEY RESULTS: Excess N significantly accelerated nodule senescence and the production of green Lb in nodules. In total, seven haemoglobin (Hb) genes were identified from the soybean genome, with these Hb genes readily split into two distinct clades containing predominantly symbiosis-associated or non-symbiotic Hb members. Expression analysis revealed that all of the symbiosis-associated Lbs except GmLb5 were specifically expressed in nodules, while the non-symbiotic GmHbs, GmHb1 and GmHb2, were predominantly expressed in leaves and roots, respectively. Among identified GmLbs, GmLb1-4 are the major Lb genes acting in soybean nodulation, and each one is also significantly suppressed by exposure to excess N. CONCLUSIONS: Taken together, the results show that excess N inhibits BNF by reducing nodule formation, Lb concentration and nitrogenase activity. The characteristics of the entire Hb family were analysed, and we found that GmLb1-4 are closely associated with nodule development and N2 fixation. This works forms the basis for further investigations of the role of Lbs in soybean nodulation.


Assuntos
Glycine max/genética , Leghemoglobina/genética , Regulação da Expressão Gênica de Plantas , Fixação de Nitrogênio , Filogenia , Proteínas de Plantas/genética , Nodulação/genética , Nódulos Radiculares de Plantas/genética , Simbiose
8.
New Phytol ; 224(2): 818-832, 2019 10.
Artigo em Inglês | MEDLINE | ID: mdl-31355948

RESUMO

Legume nodules contain high concentrations of leghemoglobins (Lbs) encoded by several genes. The reason for this multiplicity is unknown. CRISPR/Cas9 technology was used to generate stable mutants of the three Lbs of Lotus japonicus. The phenotypes were characterized at the physiological, biochemical and molecular levels. Nodules of the triple mutants were examined by electron microscopy and subjected to RNA-sequencing (RNA-seq) analysis. Complementation studies revealed that Lbs function synergistically to maintain optimal N2 fixation. The nodules of the triple mutants overproduced superoxide radicals and hydrogen peroxide, which was probably linked to activation of NADPH oxidases and changes in superoxide dismutase isoforms expression. The mutant nodules showed major ultrastructural alterations, including vacuolization, accumulation of poly-ß-hydroxybutyrate and disruption of mitochondria. RNA-seq of c. 20 000 genes revealed significant changes in expression of carbon and nitrogen metabolism genes, transcription factors, and proteinases. Lb-deficient nodules had c. 30-50-fold less heme but similar transcript levels of heme biosynthetic genes, suggesting a post-translational regulatory mechanism of heme synthesis. We conclude that Lbs act additively in nodules and that the lack of Lbs results in early nodule senescence. Our observations also provide insight into the reprogramming of the gene expression network associated with Lb deficiency, probably as a result of uncontrolled intracellular free O2 concentration.


Assuntos
Sistemas CRISPR-Cas , Regulação da Expressão Gênica de Plantas/fisiologia , Leghemoglobina/genética , Lotus/metabolismo , Fixação de Nitrogênio/fisiologia , Deleção de Genes , Regulação Enzimológica da Expressão Gênica/genética , Regulação Enzimológica da Expressão Gênica/fisiologia , Regulação da Expressão Gênica de Plantas/genética , Isoenzimas/genética , Isoenzimas/metabolismo , Leghemoglobina/metabolismo , Lotus/genética , Fixação de Nitrogênio/genética , Nodulação/genética , Nodulação/fisiologia , Superóxido Dismutase
9.
J Exp Bot ; 67(8): 2231-46, 2016 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-26962208

RESUMO

Previous studies have shown that the beneficial effect of suppression of the Arabidopsis phytoglobin 2 gene, PGB2, on somatic embryogenesis occurs through the accumulation of nitric oxide (NO) within the embryogenic cells originating from the cultured explant. NO activates the expression of Allene oxide synthase (AOS) and Lipoxygenase 2 (LOX2), genes encoding two key enzymes of the jasmonic acid (JA) biosynthetic pathway, elevating JA content within the embryogenic tissue. The number of embryos in the single aos1-1 mutant and pgb2-aos1-1 double mutant declined, and was not rescued by increasing levels of NO stimulating embryogenesis in wild-type tissue. NO also influenced JA responses by up-regulating PLANT DEFENSIN 1 (PDF1) and JASMONATE-ZIM-PROTEIN (JAZ1), as well as down-regulating MYC2. The NO and JA modulation of MYC2 and JAZ1 controlled embryogenesis. Ectopic expression of JAZ1 or suppression of MYC2 promoted the formation of somatic embryos, while repression of JAZ1 and up-regulation of MYC2 reduced the embryogenic performance. Sustained expression of JAZ1 induced the transcription of several indole acetic acid (IAA) biosynthetic genes, resulting in higher IAA levels in the embryogenic cells. Collectively these data fit a model integrating JA in the PGB2 regulation of Arabidopsis embryogenesis. Suppression of PGB2 increases JA through NO. Elevated levels of JA repress MYC2 and induce JAZ1, favoring the accumulation of IAA in the explants and the subsequent production of somatic embryos.


Assuntos
Proteínas de Arabidopsis/metabolismo , Arabidopsis/embriologia , Arabidopsis/metabolismo , Ciclopentanos/metabolismo , Leghemoglobina/metabolismo , Oxilipinas/metabolismo , Arabidopsis/efeitos dos fármacos , Arabidopsis/genética , Proteínas de Arabidopsis/genética , Vias Biossintéticas/efeitos dos fármacos , Vias Biossintéticas/genética , Regulação da Expressão Gênica de Plantas/efeitos dos fármacos , Ácidos Indolacéticos/metabolismo , Leghemoglobina/genética , Modelos Biológicos , Óxido Nítrico/farmacologia , Transcrição Gênica/efeitos dos fármacos
10.
Protein J ; 34(2): 158-67, 2015 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-25868982

RESUMO

In leguminous plants, nitrogenase that catalyzes anaerobic symbiotic nitrogen fixation is protected by the sequestration of O2 by Leghemoglobin (LegH). The modulation of the oxygen binding capacity of Hemoglobin (Hb) by different post-translational modifications is well studied; whereas similar studies on LegH's O2 binding are not yet benchmarked. Our results show that in vitro serine phosphorylation of recombinant LegH from Lotus japonicus, a model legume, by a homologous kinase caused a reduction in its oxygen consumption as determined by Clark type electrode. Although mass spectrometry revealed a few phosphorylated serine residues in the LegH, molecular modeling study showed that particularly S45 is the most critical one, along with S55, however the latter with lesser impact on its molecular environment responsible for oxygen consumption. Separate S45D and S55D mutants of recombinant LegH also corroborated the results obtained from molecular modeling study. Thus, this work lays groundwork for further investigation of structural and functional role of serine phosphorylation as one of the mechanisms by which oxygen consumption by LegH may possibly be regulated during nodulation.


Assuntos
Leghemoglobina/química , Oxigênio/química , Serina/química , Anaerobiose , Eletroforese em Gel de Poliacrilamida , Leghemoglobina/genética , Lotus/química , Simulação de Dinâmica Molecular , Mutagênese Sítio-Dirigida , Fixação de Nitrogênio , Fosforilação , Ligação Proteica , Proteínas Recombinantes/química , Proteínas Recombinantes/genética , Nódulos Radiculares de Plantas/química , Serina/genética , Espectrometria de Massas por Ionização e Dessorção a Laser Assistida por Matriz
11.
Plant Physiol ; 164(1): 400-11, 2014 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-24285852

RESUMO

The mechanism through which nitrate reduces the activity of legume nodules is controversial. The objective of the study was to follow Medicago truncatula nodule activity after nitrate provision continuously and to identify molecular mechanisms, which down-regulate the activity of the nodules. Nodule H2 evolution started to decline after about 4 h of nitrate application. At that point in time, a strong shift in nodule gene expression (RNA sequencing) had occurred (1,120 differentially expressed genes). The most pronounced effect was the down-regulation of 127 genes for nodule-specific cysteine-rich peptides. Various other nodulins were also strongly down-regulated, in particular all the genes for leghemoglobins. In addition, shifts in the expression of genes involved in cellular iron allocation and mitochondrial ATP synthesis were observed. Furthermore, the expression of numerous genes for the formation of proteins and glycoproteins with no obvious function in nodules (e.g. germins, patatin, and thaumatin) was strongly increased. This occurred in conjunction with an up-regulation of genes for proteinase inhibitors, in particular those containing the Kunitz domain. The additionally formed proteins might possibly be involved in reducing nodule oxygen permeability. Between 4 and 28 h of nitrate exposure, a further reduction in nodule activity occurred, and the number of differentially expressed genes almost tripled. In particular, there was a differential expression of genes connected with emerging senescence. It is concluded that nitrate exerts rapid and manifold effects on nitrogenase activity. A certain degree of nitrate tolerance might be achieved when the down-regulatory effect on late nodulins can be alleviated.


Assuntos
Regulação da Expressão Gênica de Plantas , Medicago truncatula/fisiologia , Nitratos/metabolismo , Nódulos Radiculares de Plantas/metabolismo , Trifosfato de Adenosina/metabolismo , Ferro/metabolismo , Leghemoglobina/genética , Leghemoglobina/metabolismo , Medicago truncatula/efeitos dos fármacos , Medicago truncatula/genética , Proteínas de Membrana/genética , Nitrato Redutase/genética , Nitrato Redutase/metabolismo , Nitratos/farmacologia , Folhas de Planta/enzimologia , Folhas de Planta/genética , Proteínas de Plantas/genética , RNA de Plantas , Reação em Cadeia da Polimerase em Tempo Real , Reprodutibilidade dos Testes , Nódulos Radiculares de Plantas/efeitos dos fármacos , Nódulos Radiculares de Plantas/genética , Análise de Sequência de RNA
12.
Biochem Soc Trans ; 39(1): 184-8, 2011 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-21265770

RESUMO

NO (nitric oxide) is a signal molecule involved in diverse physiological processes in cells which can become very toxic under certain conditions determined by its rate of production and diffusion. Several studies have clearly shown the production of NO in early stages of rhizobia-legume symbiosis and in mature nodules. In functioning nodules, it has been demonstrated that NO, which has been reported as a potent inhibitor of nitrogenase activity, can bind Lb (leghaemoglobin) to form LbNOs (nitrosyl-leghaemoglobin complexes). These observations have led to the question of how nodules overcome the toxicity of NO. On the bacterial side, one candidate for NO detoxification in nodules is the respiratory Nor (NO reductase) that catalyses the reduction of NO to nitrous oxide. In addition, rhizobial fHbs (flavohaemoglobins) and single-domain Hbs which dioxygenate NO to form nitrate are candidates to detoxify NO under free-living and symbiotic conditions. On the plant side, sHbs (symbiotic Hbs) (Lb) and nsHbs (non-symbiotic Hbs) have been proposed to play important roles as modulators of NO levels in the rhizobia-legume symbiosis. In the present review, current knowledge of NO detoxification by legume-associated endosymbiotic bacteria is summarized.


Assuntos
Fabaceae/microbiologia , Óxido Nítrico/metabolismo , Rhizobium/fisiologia , Simbiose , Sequência de Aminoácidos , Proteínas de Bactérias/genética , Proteínas de Bactérias/metabolismo , Leghemoglobina/genética , Leghemoglobina/metabolismo , Dados de Sequência Molecular , Oxirredutases/metabolismo , Nódulos Radiculares de Plantas/metabolismo , Nódulos Radiculares de Plantas/microbiologia , Alinhamento de Sequência
13.
Bioresour Technol ; 102(3): 2610-6, 2011 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-21036035

RESUMO

According to the codon bias in the chloroplast genome of Chlamydomonas reinhardtii, the codon-optimized coding regions of both the ferrochelatase gene, hemH, from Bradyrhizobium japonicum and the leghemoglobin gene, lba, from Glycine max were synthesized de novo and transferred into the chloroplast of C. reinhardtii. The expression level of hemH-lba protein was improved by 6.8 folds in the codon-optimized transgenic alga compared with the non-optimized one under both normal and anaerobic conditions. H(2) yield was 22% and the respiration rate was 44% higher in the codon-optimized transgenic algal cultures than those of the non-optimized ones, and was 450% and 134% higher than those of the control cultures, respectively. The transcript levels of hydA1 and hydA2 in the hemH-lba transgenic alga were also more stable and higher than those of the control alga. These results demonstrate that codon optimization increased the expression level of hemH-lba protein in the chloroplast of C. reinhardtii and improved algal H(2) yield by enhancing the respiration rate resulting in low O(2) content in the medium and up regulation of the expression of hydA1 and hydA2 in cells, thereby confirming the potential of the utilization of leghemoglobins for H(2) production in green algae.


Assuntos
Biocombustíveis/microbiologia , Chlamydomonas reinhardtii/fisiologia , Cloroplastos/fisiologia , Ferroquelatase/metabolismo , Melhoramento Genético/métodos , Hidrogênio/metabolismo , Leghemoglobina/metabolismo , Clonagem Molecular , Códon/genética , Ferroquelatase/genética , Leghemoglobina/genética
14.
Prikl Biokhim Mikrobiol ; 46(3): 324-30, 2010.
Artigo em Russo | MEDLINE | ID: mdl-20586285

RESUMO

A nonenzymatic glycation of the recombinant leghemoglobin expressed in Escherichia coli cells was demonstrated for the first time. This process involved the heme pocket and gave low-spin leghemoglobin species. A correlation between the degree of E. coli protein glycation and synthesis of poly-beta-hydroxybutyric acid was found, suggesting that the accumulation of reserve carbon sources and nonenzymatic glycation could be alternative processes.


Assuntos
Escherichia coli , Expressão Gênica , Glycine max , Leghemoglobina/biossíntese , Proteínas Recombinantes/biossíntese , Glicosilação , Leghemoglobina/química , Leghemoglobina/genética , Proteínas Recombinantes/química , Proteínas Recombinantes/genética
15.
J Biotechnol ; 146(3): 120-5, 2010 Apr 01.
Artigo em Inglês | MEDLINE | ID: mdl-20138927

RESUMO

The coding region of both the ferrochelatase gene, hemH, from Bradyrhizobium japonicum, and the leghemoglobin gene, lba, from Glycine max, were transferred into chloroplast of Chlamydomonas reinhardtii. As a result, transgenic C. reinhardtii cultures more rapidly consumed O(2) and increased H(2) output compared with controls in both sulfur-free and sulfur-containing medium. H(2) production of the transgenic algal cultures in sulfur-free medium was 4-fold greater than that of control cultures, approximately 3.3mlbottle(-1). Maximum expression of the hemH-lba fusion protein on day 5 coincided with the lowest levels of O(2) content and the highest H(2) evolution rate detected over 7 days of anaerobic induction in sulfur-free medium. When the concentration of sulfate in the growth medium was restored to 12.5 or 50microM, O(2) consumption and H(2) yield decreased more slowly in the transgenic algal cultures than in the control cultures. These results demonstrate that expression of the hemH-lba fusion protein in chloroplast of C. reinhardtii improved their H(2) yield by decreasing O(2) content in the medium, thereby representing the potential for H(2) production in green algae to be improved.


Assuntos
Chlamydomonas reinhardtii/fisiologia , Cloroplastos/metabolismo , Ferroquelatase/metabolismo , Melhoramento Genético/métodos , Hidrogênio/metabolismo , Leghemoglobina/metabolismo , Engenharia de Proteínas/métodos , Cloroplastos/genética , Ferroquelatase/genética , Regulação Bacteriana da Expressão Gênica/fisiologia , Leghemoglobina/genética , Proteínas Recombinantes/metabolismo
16.
Plant Physiol ; 152(3): 1501-13, 2010 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-20089769

RESUMO

The role of nitrogen metabolism in the survival of prolonged periods of waterlogging was investigated in highly flood-tolerant, nodulated Lotus japonicus plants. Alanine production revealed to be a critical hypoxic pathway. Alanine is the only amino acid whose biosynthesis is not inhibited by nitrogen deficiency resulting from RNA interference silencing of nodular leghemoglobin. The metabolic changes that were induced following waterlogging can be best explained by the activation of alanine metabolism in combination with the modular operation of a split tricarboxylic acid pathway. The sum result of this metabolic scenario is the accumulation of alanine and succinate and the production of extra ATP under hypoxia. The importance of alanine metabolism is discussed with respect to its ability to regulate the level of pyruvate, and this and all other changes are discussed in the context of current models concerning the regulation of plant metabolism.


Assuntos
Alanina Transaminase/metabolismo , Ciclo do Ácido Cítrico , Glicólise , Lotus/metabolismo , Trifosfato de Adenosina/biossíntese , Alanina/biossíntese , Alanina Transaminase/genética , Fermentação , Regulação da Expressão Gênica de Plantas , Hipóxia , Leghemoglobina/genética , Lotus/genética , Nitrogênio/metabolismo , Fixação de Nitrogênio/genética , Ácido Pirúvico/metabolismo , Interferência de RNA , Ácido Succínico/metabolismo , Água
17.
Wei Sheng Wu Xue Bao ; 50(12): 1607-12, 2010 Dec.
Artigo em Chinês | MEDLINE | ID: mdl-21365913

RESUMO

OBJECTIVE: The objectives of this work were (i) to construct a yeast two-hybrid AD-cDNA library of Astragalus sinicus and provide a fundamental system to screen target proteins involved symbiotic nitrogen fixation, and (ii) to isolate the target proteins interacting with the leghemoglobin. METHODS: By using the Matchmaker Library Construction & Screening Kit (Clontech), we constructed a yeast AD-cDNA library basing on the total RNA, which was isolated from the root and nodule tissues of A. sinicus at different developmental stages infected by Mesorhizobium huakuii 7653R. RESULTS: The quality examination of the AD-cDNA library showed that the transformation efficiency was 1.0 x 10(6) transformants/3 microg pGADT7-Rec DNA, and the average length of cDNA inserts was around 1.0 kb. The library was then screened with the leghemoglobin AsB2510 as bait by yeast two-hybrid system, and 26 positive clones was obtained on SD/-Leu/-Trp/-His/-Ade containing X-gal. 10 of them were individually further confirmed by resuing the plasmid, amplifying the cDNA insert and retesting the protein-interacting phenotype. CONCLUSIONS: The cDNA inserts of positive clones were sequenced and undertaken a blast analysis in NCBI database, it was found that clone LY-53 contained a tify domain and divergent CCT motif, which was an important transcription factor needs in-depth investigation.


Assuntos
Astrágalo/genética , Biblioteca Gênica , Leghemoglobina/genética , Fixação de Nitrogênio , Sequência de Aminoácidos , Dados de Sequência Molecular , Plasmídeos , Técnicas do Sistema de Duplo-Híbrido
18.
Mol Plant Microbe Interact ; 22(7): 800-8, 2009 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-19522562

RESUMO

During development of legume root nodules, rhizobia and their host plant cells undergo profound differentiation, which is underpinned by massive changes in gene expression in both symbiotic partners. Oxygen concentrations in infected and surrounding uninfected cells drop precipitously during nodule development. To assess what effects this has on plant and bacterial cell differentiation and gene expression, we used a leghemoglobin-RNA-interference (LbRNAi) line of Lotus japonicus, which is devoid of leghemoglobins and has elevated levels of free-oxygen in its nodules. Bacteroids in LbRNAi nodules showed altered ultrastructure indicating changes in bacterial differentiation. Transcript analysis of 189 plant and 192 bacterial genes uncovered many genes in both the plant and bacteria that were differentially regulated during nodulation of LbRNAi plants compared with the wild type (containing Lb and able to fix nitrogen). These included fix and nif genes of the bacteria, which are involved in microaerobic respiration and nitrogen fixation, respectively, and plant genes involved in primary and secondary metabolism. Metabolite analysis revealed decreased levels of many amino acids in nodules of LbRNAi plants, consistent with the defect in symbiotic nitrogen fixation of this line.


Assuntos
Diferenciação Celular , Leghemoglobina/metabolismo , Lotus/microbiologia , Rhizobium/citologia , Aminoácidos/metabolismo , Perfilação da Expressão Gênica , Regulação da Expressão Gênica , Leghemoglobina/genética , Lotus/citologia , Lotus/fisiologia , Fixação de Nitrogênio/genética , Oxigênio/metabolismo , Interferência de RNA , RNA Mensageiro , Rhizobium/genética , Rhizobium/metabolismo , Nódulos Radiculares de Plantas/citologia , Nódulos Radiculares de Plantas/microbiologia , Nódulos Radiculares de Plantas/fisiologia
19.
J Mol Biol ; 371(1): 168-79, 2007 Aug 03.
Artigo em Inglês | MEDLINE | ID: mdl-17560601

RESUMO

The evolution of oxygen transport hemoglobins occurred on at least two independent occasions. The earliest event led to myoglobin and red blood cell hemoglobin in animals. In plants, oxygen transport "leghemoglobins" evolved much more recently. In both events, pentacoordinate heme sites capable of inert oxygen transfer evolved from hexacoordinate hemoglobins that have unrelated functions. High sequence homology between hexacoordinate and pentacoordinate hemoglobins in plants has poised them for potential structural analysis leading to a molecular understanding of this important evolutionary event. However, the lack of a plant hexacoordinate hemoglobin structure in the exogenously ligand-bound form has prevented such comparison. Here we report the crystal structure of the cyanide-bound hexacoordinate hemoglobin from barley. This presents the first opportunity to examine conformational changes in plant hexacoordinate hemoglobins upon exogenous ligand binding, and reveals structural mechanisms for stabilizing the high-energy pentacoordinate heme conformation critical to the evolution of reversible oxygen binding hemoglobins.


Assuntos
Evolução Molecular , Fósseis , Leghemoglobina/química , Oxigênio/metabolismo , Proteínas de Plantas/química , Conformação Proteica , Sequência de Aminoácidos , Animais , Cristalografia por Raios X , Hordeum/química , Ligação de Hidrogênio , Leghemoglobina/classificação , Leghemoglobina/genética , Leghemoglobina/metabolismo , Modelos Moleculares , Dados de Sequência Molecular , Oryza/química , Filogenia , Proteínas de Plantas/classificação , Proteínas de Plantas/genética , Proteínas de Plantas/metabolismo , Alinhamento de Sequência , Glycine max/química
20.
Gene ; 398(1-2): 78-85, 2007 Aug 15.
Artigo em Inglês | MEDLINE | ID: mdl-17540516

RESUMO

This review describes contributions to the study of plant hemoglobins (Hbs) from a historical perspective with emphasis on non-symbiotic Hbs (nsHbs). Plant Hbs were first identified in soybean root nodules, are known as leghemoglobins (Lbs) and have been characterized in detail. It is widely accepted that a function of Lbs in nodules is to facilitate the diffusion of O(2) to bacteroids. For many years Hbs could not be identified in plants other than N(2)-fixing legumes, however in the 1980s a Hb was isolated from the nodules of the non-legume dicot plant Parasponia, a hb gene was cloned from the non-nodulating Trema, and Hbs were detected in nodules of actinorhizal plants. Gene expression analysis showed that Trema Hb transcripts exist in non-symbiotic roots. In the 1990s nsHb sequences were also identified in monocot and primitive (bryophyte) plants. In addition to Lbs and nsHbs, Hb sequences that are similar to microbial truncated (2/2) Hbs were also detected in plants. Plant nsHbs have been characterized in detail. These proteins have very high O(2)-affinities because of an extremely low O(2)-dissociation constant. Analysis of rice Hb1 showed that distal His coordinates heme Fe and stabilizes bound O(2); this means that O(2) is not released easily from oxygenated nsHbs. Non-symbiotic hb genes are expressed in specific plant tissues, and overexpress in organs of stressed plants. These observations suggest that nsHbs have functions additional to O(2)-transport, such as to modulate levels of ATP and NO.


Assuntos
Glycine max/genética , Leghemoglobina/genética , Proteínas de Plantas/genética , Regulação da Expressão Gênica de Plantas , Hemeproteínas/química , Hemeproteínas/genética , Leghemoglobina/química , Filogenia , Proteínas de Plantas/química , Raízes de Plantas/genética , Plantas/classificação , Plantas/genética , Estrutura Terciária de Proteína
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