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1.
Sci Total Environ ; 942: 173656, 2024 Sep 10.
Artigo em Inglês | MEDLINE | ID: mdl-38830414

RESUMO

Coastal and estuarine environments are under endogenic and exogenic pressures jeopardizing survival and diversity of inhabiting biota. Information of possible synergistic effects of multiple (a)biotic stressors and holobiont interaction are largely missing in estuaries like the Elbe but are of importance to estimate unforeseen effects on animals' physiology. Here, we seek to leverage host-transcriptional RNA-seq and gill mucus microbial 16S rRNA metabarcoding data coupled with physiological and abiotic measurements in a network analysis approach to decipher the impact of multiple stressors on the health of juvenile Sander lucioperca along one of the largest European estuaries. We find mesohaline areas characterized by gill tissue specific transcriptional responses matching osmosensing and tissue remodeling. Liver transcriptomes instead emphasized that zander from highly turbid areas were undergoing starvation which was supported by compromised body condition. Potential pathogenic bacteria, including Shewanella, Acinetobacter, Aeromonas and Chryseobacterium, dominated the gill microbiome along the freshwater transition and oxygen minimum zone. Their occurrence coincided with a strong adaptive and innate transcriptional immune response in host gill and enhanced energy demand in liver tissue supporting their potential pathogenicity. Taken together, we show physiological responses of a fish species and its microbiome to abiotic factors whose impact is expected to increase with consequences of climate change. We further present a method for the close-meshed detection of the main stressors and bacterial species with disease potential in a highly productive ecosystem.


Assuntos
Estuários , Animais , Monitoramento Ambiental , Brânquias/microbiologia , Microbiota , Transcriptoma , RNA Ribossômico 16S , Mudança Climática , Percas/fisiologia , Percas/microbiologia
2.
Fish Shellfish Immunol ; 121: 265-275, 2022 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-35026410

RESUMO

The aim of this study is to explore the effects of dietary bile acids (BAs) supplementation on lipid metabolism and gut health of Chinese perch (Siniperca chuatsi), and its possible mechanisms. Two isonitrogenous and isolipidic diets were formulated to supplement different levels of BAs (0 and 900 mg BAs kg-1 diet, respectively). All fish (Initial mean body weight: 171.29 ± 0.77g) were randomly divided into 2 groups (triplicate, 54 fish/group) and were fed with different experimental diets for 56 days, respectively. Dietary exogenous BAs supplementation at the concentration of 900 mg kg-1 significantly increased weight gain and survival rate, and decreased feed conversion ratio. BAs could inhibit lipid synthesis and promote lipid oxidation to reduce lipid deposition by activating farnesoid X receptor (FXR). Dietary BAs supplementation increased the abundance of Lactobacilli in Firmicutes, and the increase of Lactobacillus caused the increase of lactic acid level and the decrease of pH, which might be the reason for the gut villus length and gut wall high in this study. Dietary BAs supplementation increased the levels of catalase and superoxide dismutase and decreased the level of malondialdehyde in the gut and plasma, which might be contributed to the regulating the antioxidant stress phenotype of gut microbiota by the increased abundance of Firmicutes. Then it caused the increase of the globulin level in the plasma, meaning the enhancement of immune state. The increased immunity might also be thought to be responsible for increased survival rate. These results suggest dietary BAs reduce liver lipid deposition via activating FXR, and improve gut health by regulating gut microbiota in Chinese perch.


Assuntos
Ácidos e Sais Biliares , Microbioma Gastrointestinal , Metabolismo dos Lipídeos , Percas , Receptores Citoplasmáticos e Nucleares , Animais , Ácidos e Sais Biliares/administração & dosagem , China , Dieta/veterinária , Fígado/metabolismo , Percas/microbiologia , Aumento de Peso
3.
Sci Rep ; 11(1): 5826, 2021 03 12.
Artigo em Inglês | MEDLINE | ID: mdl-33712685

RESUMO

Diseased Anabas testudineus exhibiting signs of tail-rot and ulcerations on body were collected from a fish farm in Assam, India during the winter season (November 2018 to January 2019). Swabs from the infected body parts were streaked on sterilized nutrient agar. Two dominant bacterial colonies were obtained, which were then isolated and labelled as AM-31 and AM-05. Standard biochemical characterisation and 16S rRNA and rpoB gene sequencing identified AM-31 isolate as Aeromonas hydrophila and AM-05 as Aeromonas jandaei. Symptoms similar to that of natural infection were observed on re-infecting both bacteria to disease-free A. testudineus, which confirmed their virulence. LC50 was determined at 1.3 × 104 (A. hydrophila) and 2.5 × 104 (A. jandaei) CFU per fish in intraperitoneal injection. Further, PCR amplification of specific genes responsible for virulence (aerolysin and enterotoxin) confirmed pathogenicity of both bacteria. Histopathology of kidney and liver in the experimentally-infected fishes revealed haemorrhage, tubular degeneration and vacuolation. Antibiotic profiles were also assessed for both bacteria. To the best of our knowledge, the present work is a first report on the mortality of farmed climbing perch naturally-infected by A. hydrophila as well as A. jandaei, with no records of pathogenicity of the latter in this fish.


Assuntos
Aeromonas hydrophila/isolamento & purificação , Aeromonas/isolamento & purificação , Doenças dos Peixes/microbiologia , Infecções por Bactérias Gram-Negativas/veterinária , Septicemia Hemorrágica/veterinária , Percas/microbiologia , Animais , Infecções por Bactérias Gram-Negativas/microbiologia , Septicemia Hemorrágica/microbiologia
4.
Aquat Toxicol ; 229: 105658, 2020 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-33099035

RESUMO

In July 2016, a Husky Energy pipeline spilled 225,000 L of diluted heavy crude oil, with a portion of the oil entering the North Saskatchewan River near Maidstone, SK, Canada. This event provided a unique opportunity to assess potential effects of a crude oil constituent (namely polycyclic aromatic hydrocarbons, PAHs) on a possible sensitive indicator of freshwater ecosystem health, the gut microbiota of native fishes. In summer 2017, goldeye (Hiodon alosoides), walleye (Sander vitreus), northern pike (Esox lucius), and shorthead redhorse (Moxostoma macrolepidotum) were collected at six locations upstream and downstream of the spill. Muscle and bile were collected from individual fish for quantification of PAHs and intestinal contents were collected for characterization of the microbial community of the gut. Results suggested that host species is a significant determinant of gut microbiota, with significant differences among the species across sites. Concentrations of PAHs in dorsal muscle were significantly correlated with gut community compositions of walleye, but not of the other fishes. Concentrations of PAHs in muscle were also correlated with abundances of several families of bacteria among fishes. This study represents one of the first to investigate the response of the gut microbiome of wild fishes to chemical stressors.


Assuntos
Peixes/microbiologia , Microbioma Gastrointestinal , Poluição por Petróleo/análise , Rios , Animais , Biotransformação/efeitos dos fármacos , Esocidae/microbiologia , Geografia , Microbiota/efeitos dos fármacos , Percas/microbiologia , Hidrocarbonetos Policíclicos Aromáticos/análise , Saskatchewan , Estações do Ano , Poluentes Químicos da Água/toxicidade
5.
Microbiome ; 8(1): 14, 2020 02 10.
Artigo em Inglês | MEDLINE | ID: mdl-32041654

RESUMO

BACKGROUND: The eco-evolutionary processes ruling post-disturbance microbial assembly remain poorly studied, particularly in host-microbiome systems. The community recovery depends not only on the type, duration, intensity, and gradient of disturbance, but also on the initial community structure, phylogenetic composition, legacy, and habitat (soil, water, host). In this study, yellow perch (Perca flavescens) juveniles were exposed over 90 days to constant and gradual sublethal doses of cadmium chloride. Afterward, the exposure of aquaria tank system to cadmium was ceased for 60 days. The skin, gut and water tank microbiomes in control and treatment groups, were characterized before, during and after the cadmium exposure using 16s rDNA libraries and high throughput sequencing technology (Illumina, Miseq). RESULTS: Our data exhibited long-term bioaccumulation of cadmium salts in the liver even after two months since ceasing the exposure. The gradient of cadmium disturbance had differential effects on the perch microbiota recovery, including increases in evenness, taxonomic composition shifts, as well as functional and phylogenetic divergence. The perch microbiome reached an alternative stable state in the skin and nearly complete recovery trajectories in the gut communities. The recovery of skin communities showed a significant proliferation of opportunistic fish pathogens (i.e., Flavobacterium). Our findings provide evidence that neutral processes were a much more significant contributor to microbial community turnover in control treatments than in those treated with cadmium, suggesting the role of selective processes in driving community recovery. CONCLUSIONS: The short-term metallic disturbance of fish development has important long-term implications for host health. The recovery of microbial communities after metallic exposure depends on the magnitude of exposure (constant, gradual), and the nature of the ecological niche (water, skin, and gut). The skin and gut microbiota of fish exposed to constant concentrations of cadmium (CC) were closer to the control negative than those exposed to the gradual concentrations (CV). Overall, our results show that the microbial assembly during the community recovery were both orchestrated by neutral and deterministic processes. Video Abtract.


Assuntos
Bactérias/classificação , Cloreto de Cádmio/farmacologia , Microbiota/efeitos dos fármacos , Percas/microbiologia , Animais , Bactérias/efeitos dos fármacos , Bactérias/patogenicidade , Bioacumulação , Sequenciamento de Nucleotídeos em Larga Escala , Fígado/metabolismo , Metagenômica , Percas/metabolismo , Filogenia , RNA Ribossômico 16S/genética , Estresse Fisiológico
6.
J Fish Dis ; 43(1): 23-38, 2020 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-31663143

RESUMO

Using the approach of sequencing the V3-V4 region of the 16S rRNA gene, we have analysed the bacterial diversity associated with the distinct compartments of the gastrointestinal tract of perch (Perca fluviatilis) and cestodes (Proteocephalus sp.) parasitizing their digestive tract. The dominant microbiota associated with cestodes (Proteocephalus sp.) was represented by bacteria from the genera Serratia, Pseudomonas and Mycoplasma. By comparing the associated microbiota of perch and cestodes, a clear difference in bacterial composition and diversity was revealed between the community from the stomach content and other parts of the gastrointestinal tract of fish. Microbiota associated with cestodes was not significantly different in comparison with microbiota of different subcompartments of perch (mucosa and content of intestine and pyloric caeca) (ADONIS, p > .05) excluding microbiota of stomach content (ADONIS, p ≤ .05). PICRUSt-based functional assessments of the microbial communities of perch and cestodes indicated that they mainly linked in terms of metabolism and environmental information processing and could play an important role in the nutrition and health of host.


Assuntos
Infecções por Cestoides/veterinária , Doenças dos Peixes/epidemiologia , Gastroenteropatias/veterinária , Microbioma Gastrointestinal , Percas , Animais , Infecções por Cestoides/epidemiologia , Infecções por Cestoides/parasitologia , Feminino , Doenças dos Peixes/parasitologia , Gastroenteropatias/epidemiologia , Gastroenteropatias/parasitologia , Masculino , Percas/microbiologia , Sibéria/epidemiologia
7.
J Exp Biol ; 222(Pt 24)2019 12 12.
Artigo em Inglês | MEDLINE | ID: mdl-31753905

RESUMO

Protein catabolism during digestion generates appreciable levels of ammonia in the gastrointestinal tract (GIT) lumen. Amelioration by the enterocyte, via enzymes such as glutamine synthetase (GS), glutamate dehydrogenase (GDH), and alanine and aspartate aminotransferases (ALT; AST), is found in teleost fish. Conservation of these enzymes across bacterial phyla suggests that the GIT microbiome could also contribute to ammonia detoxification by providing supplemental activity. Hence, the GIT microbiome, enzyme activities and ammonia detoxification were investigated in two fish occupying dissimilar niches: the carnivorous rainbow darter and the algivorous central stoneroller. There was a strong effect of fish species on the activity levels of GS, GDH, AST and ALT, as well as GIT lumen ammonia concentration, and bacterial composition of the GIT microbiome. Furthermore, removal of the intestinal bacteria impacted intestinal activities of GS and ALT in the herbivorous fish but not in the carnivore. The repeatability and robustness of this relationship was tested across field locations and years. Within an individual waterbody, there was no impact of sampling location on any of these factors. However, different waterbodies affected enzyme activities and luminal ammonia concentrations in both fish, while only the central stoneroller intestinal bacteria populations varied. Overall, a relationship between GIT bacteria, enzyme activity and ammonia detoxification was observed in herbivorous fish while the carnivorous fish displayed a correlation between enzyme activity and ammonia detoxification alone that was independent of the GIT microbiome. This could suggest that carnivorous fish are less dependent on non-host mechanisms for ammonia regulation in the GIT.


Assuntos
Amônia/metabolismo , Cyprinidae/microbiologia , Microbioma Gastrointestinal , Intestinos/microbiologia , Percas/microbiologia , Animais , Bactérias/metabolismo , Cyprinidae/metabolismo , Feminino , Inativação Metabólica , Masculino , Ontário , Percas/metabolismo
8.
Sci Rep ; 8(1): 6891, 2018 05 02.
Artigo em Inglês | MEDLINE | ID: mdl-29720669

RESUMO

Stress enhances the disease susceptibility in fish by altering the innate immune responses, which are essential defense mechanisms. The use of probiotics is increasingly popular in the aquaculture industry. Yellow perch is a promising candidate for aquaculture. We investigated the efficiency of a mixed Bacillus species in minimizing the potential problems resulting from husbandry practices such as hypoxia and exposure to air in yellow perch. We showed that hypoxia and air exposure conditions induced a significant reduction in the early innate immune response (lysozyme activity, interferon-induced-GTP-binding protein-Mx1 [mx], interleukin-1ß [il1ß], serum amyloid-A [saa]), and a substantial increase in cortisol, heat shock protein (Hsp70), glutathione peroxidase (Gpx), superoxide dismutase (Sod1) that associated with a decline in insulin-like growth factor-1 (Igf1). Mixed Bacillus species administration improved the early innate responses, reduced cortisol, Hsp70, Gpx and Sod1, and elevated Igf1 levels. Bacillus species treated group showed faster recovery to reach the baseline levels during 24 h compared to untreated group. Therefore, mixed Bacillus species may enhance yellow perch welfare by improving the stress tolerance and early innate immune response to counterbalance the various husbandry stressors. Further studies are warranted to investigate the correlations between the aquaculture practices and disease resistance in yellow perch.


Assuntos
Bacillus/imunologia , Hipóxia/imunologia , Imunidade Inata , Estresse Oxidativo , Percas/imunologia , Animais , Bacillus/patogenicidade , Proteínas de Peixes/genética , Proteínas de Peixes/metabolismo , Glutationa Peroxidase/genética , Glutationa Peroxidase/metabolismo , Proteínas de Choque Térmico HSP70/genética , Proteínas de Choque Térmico HSP70/metabolismo , Hidrocortisona/metabolismo , Hipóxia/microbiologia , Fator de Crescimento Insulin-Like I/genética , Fator de Crescimento Insulin-Like I/metabolismo , Interleucina-1beta/genética , Interleucina-1beta/metabolismo , Percas/microbiologia , Percas/fisiologia , Superóxido Dismutase/genética , Superóxido Dismutase/metabolismo
9.
Microbiome ; 6(1): 28, 2018 02 06.
Artigo em Inglês | MEDLINE | ID: mdl-29409543

RESUMO

BACKGROUND: Gut microbiota provide functions of importance to influence hosts' food digestion, metabolism, and protection against pathogens. Factors that affect the composition and functions of gut microbial communities are well studied in humans and other animals; however, we have limited knowledge of how natural food web factors such as stress from predators and food resource rations could affect hosts' gut microbiota and how it interacts with host sex. In this study, we designed a two-factorial experiment exposing perch (Perca fluviatilis) to a predator (pike, Esox lucius), and different food ratios, to examine the compositional and functional changes of perch gut microbiota based on 16S rRNA amplicon sequencing. We also investigated if those changes are host sex dependent. RESULTS: We showed that overall gut microbiota composition among individual perch significantly responded to food ration and predator presence. We found that species richness decreased with predator presence, and we identified 23 taxa from a diverse set of phyla that were over-represented when a predator was present. For example, Fusobacteria increased both at the lowest food ration and at predation stress conditions, suggesting that Fusobacteria are favored by stressful situations for the host. In concordance, both food ration and predation stress seemed to influence the metabolic repertoire of the gut microbiota, such as biosynthesis of other secondary metabolites, metabolism of cofactors, and vitamins. In addition, the identified interaction between food ration and sex emphasizes sex-specific responses to diet quantity in gut microbiota. CONCLUSIONS: Collectively, our findings emphasize an alternative state in gut microbiota with responses to changes in natural food webs depending on host sex. The obtained knowledge from this study provided us with an important perspective on gut microbiota in a food web context.


Assuntos
Bactérias/classificação , Percas/microbiologia , RNA Ribossômico 16S/genética , Análise de Sequência de DNA/métodos , Estresse Fisiológico , Animais , Bactérias/genética , Bactérias/isolamento & purificação , Bactérias/metabolismo , DNA Bacteriano/genética , DNA Ribossômico/genética , Esocidae/fisiologia , Feminino , Microbioma Gastrointestinal , Sequenciamento de Nucleotídeos em Larga Escala , Masculino , Comportamento Predatório , Metabolismo Secundário
10.
Environ Pollut ; 234: 769-778, 2018 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-29247939

RESUMO

Oil sands-affected water from mining must eventually be incorporated into the reclaimed landscape or treated and released. However, this material contains petrogenic organic compounds, such as naphthenic acids and traces of polycyclic aromatic hydrocarbons. This has raised concerns for impacts of oil sands process-affected waters on the heath of wildlife and humans downstream of receiving environments. The objective of this study was to evaluate the temporal association of disease states in fish with water chemistry of oil sands-affected waters over more than a decade and determine the pathogens associated with disease pathologies. Yellow perch (Perca flavescens) captured from nearby lakes were stocked into two experimental ponds during 1995-1997 and 2008-2010. South Bison Pond is a drainage basin that has received unextracted oil sands-contaminated material. Demonstration Pond is a constructed pond containing mature fine tailings capped with fresh water. Two disease pathologies, fin erosion for which a suspected bacterial pathogen (Acinetobacter Iwoffi) is identified, and lymphocystis (confirmed using a real-time PCR) were associated with oil sands-affected water exposure. From 1995 to 1997 pathologies were most prevalent in the South Bison Pond; however, from 2008 to 2009, disease was more frequently observed in the Demonstration Pond. CYP1A activity was 3-16 fold higher in fish from experimental ponds as compared to reference populations and this pattern was consistent across all sampling years. Bile fluorescence displayed a gradient of exposure with experimental ponds being elevated over local perch populations. Naphthenic acids decreased in the Bison Pond from approximately 12 mg/L to <4 mg/L while naphthenic acids increased in the Demonstration Pond from 6 mg/L to 12 mg/L due to tailings densification. Temporal changes in naphthenic acid levels, CYP1A activity and bile fluorescent metabolites correlate positively with incidence of disease pathologies whereas all inorganic water quality changes (major ions, pH, metals) were not associated with disease responses.


Assuntos
Infecções por Acinetobacter/microbiologia , Infecções por Vírus de DNA/virologia , Doenças dos Peixes/microbiologia , Doenças dos Peixes/virologia , Hidrocarbonetos Policíclicos Aromáticos/química , Poluentes Químicos da Água/química , Acinetobacter/genética , Acinetobacter/isolamento & purificação , Acinetobacter/fisiologia , Infecções por Acinetobacter/etiologia , Animais , Infecções por Vírus de DNA/etiologia , Doenças dos Peixes/etiologia , Iridoviridae/genética , Iridoviridae/isolamento & purificação , Iridoviridae/fisiologia , Lagos/química , Metais/efeitos adversos , Metais/análise , Mineração , Campos de Petróleo e Gás , Percas/microbiologia , Percas/virologia , Hidrocarbonetos Policíclicos Aromáticos/efeitos adversos , Lagoas/química , Poluentes Químicos da Água/efeitos adversos , Qualidade da Água
11.
J Fish Biol ; 92(1): 94-104, 2018 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-29124770

RESUMO

This study characterized the gastrointestinal microbiome of nine juvenile farmed pikeperch Sander lucioperca using a metagenomics approach based on bacterial 16S rRNA gene sequencing. Potential changes in the gut microbiota during 2 months of S. lucioperca juvenile life were investigated. Results revealed that gut microbiota was dominated by Proteobacteria (95-92%), while other phyla Firmicutes (1-1·5%) and Actinobacteria (0·9-1·5%) were less abundant. At the family level, fish-gut microbiota were dominated by Enterobacteriaceae, which constituted c. 83% of all DNA sequence reads. Such a situation was present in all of the examined fish except one, which showed a different proportion of particular microbial taxa than the other fish. In this fish, a higher relative abundance (%) of Fusobacteria (21·0%), Bacteroidetes (9·5%) and Firmicutes (7·5%) was observed. There were no significant differences in the gut microbiome structure at different stages of development in the examined fish. This may indicate that Proteobacteria inhabiting the gut microbiota at an early stage of life are a necessary component of the pikeperch microbiome that may support proper nutrition of the fish. The information obtained on the gut microbiome could be useful in determining juvenile S. lucioperca health and improving rearing conditions by welfare monitoring in aquaculture.


Assuntos
Microbioma Gastrointestinal , Percas/microbiologia , Animais , Aquicultura , DNA Bacteriano/química , Metagenômica , Percas/genética , Percas/crescimento & desenvolvimento , Proteobactérias , RNA Ribossômico 16S/genética
12.
Methods Mol Biol ; 1404: 203-209, 2016.
Artigo em Inglês | MEDLINE | ID: mdl-27076300

RESUMO

The production of an immersion vaccine and the vaccination procedure to immunize fry of perch (Perca fluviatilis L.) against pathogenic Aeromonas sobria that harbor a type III secretion system is described. The vaccine, based on chemically inactivated A. sobria, enables rapid vaccination of a large number of fish by immersion of fry in an aqueous vaccine suspension during 5 min, giving them high protection during fattening under open water conditions in a freshwater lake for at least 4 months.


Assuntos
Aeromonas/imunologia , Vacinas Bacterianas/imunologia , Percas/microbiologia , Aeromonas/fisiologia , Animais , Antígenos de Bactérias/imunologia , Vacinação
14.
Nat Commun ; 5: 4500, 2014 Jul 29.
Artigo em Inglês | MEDLINE | ID: mdl-25072318

RESUMO

Vertebrates harbour diverse communities of symbiotic gut microbes. Host diet is known to alter microbiota composition, implying that dietary treatments might alleviate diseases arising from altered microbial composition ('dysbiosis'). However, it remains unclear whether diet effects are general or depend on host genotype. Here we show that gut microbiota composition depends on interactions between host diet and sex within populations of wild and laboratory fish, laboratory mice and humans. Within each of two natural fish populations (threespine stickleback and Eurasian perch), among-individual diet variation is correlated with individual differences in gut microbiota. However, these diet-microbiota associations are sex dependent. We document similar sex-specific diet-microbiota correlations in humans. Experimental diet manipulations in laboratory stickleback and mice confirmed that diet affects microbiota differently in males versus females. The prevalence of such genotype by environment (sex by diet) interactions implies that therapies to treat dysbiosis might have sex-specific effects.


Assuntos
Dieta , Trato Gastrointestinal/microbiologia , Camundongos/microbiologia , Microbiota , Percas/microbiologia , Fenótipo , Smegmamorpha/microbiologia , Análise de Variância , Animais , Sequência de Bases , Primers do DNA/genética , Disbiose/tratamento farmacológico , Disbiose/microbiologia , Feminino , Humanos , Masculino , Dados de Sequência Molecular , RNA Ribossômico 16S/genética , Análise de Sequência de DNA , Fatores Sexuais , Especificidade da Espécie
15.
Ecol Lett ; 17(8): 979-87, 2014 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-24847735

RESUMO

Vertebrates' diets profoundly influence the composition of symbiotic gut microbial communities. Studies documenting diet-microbiota associations typically focus on univariate or categorical diet variables. However, in nature individuals often consume diverse combinations of foods. If diet components act independently, each providing distinct microbial colonists or nutrients, we expect a positive relationship between diet diversity and microbial diversity. We tested this prediction within each of two fish species (stickleback and perch), in which individuals vary in their propensity to eat littoral or pelagic invertebrates or mixtures of both prey. Unexpectedly, in most cases individuals with more generalised diets had less diverse microbiota than dietary specialists, in both natural and laboratory populations. This negative association between diet diversity and microbial diversity was small but significant, and most apparent after accounting for complex interactions between sex, size and diet. Our results suggest that multiple diet components can interact non-additively to influence gut microbial diversity.


Assuntos
Biodiversidade , Dieta/veterinária , Intestinos/microbiologia , Percas/microbiologia , Smegmamorpha/microbiologia , Animais , Tamanho Corporal , Feminino , Água Doce , Masculino
16.
Toxicon ; 76: 178-86, 2013 Dec 15.
Artigo em Inglês | MEDLINE | ID: mdl-24018361

RESUMO

Toxic cyanobacterial blooms are an important problem worldwide. Cyanobacteria may negatively impact young-of-the-year (YOY) fish directly (toxin production, turbidity, decrease in water quality) or indirectly (trophic toxin transfer, changes in prey species composition). Here we test whether there are any differences in cyanobacterial tolerance between four geographically distinct populations of European perch (Perca fluviatilis). We show that P. fluviatilis may develop tolerance against cyanobacteria demonstrated by the ability of individuals from a marine site (exposed to annual cyanobacterial blooms) to increase their detoxification more than individuals from an oligotrophic site (rarely exposed to cyanobacteria). Our results also revealed significant interaction effects between genotypes within a population and response to cyanobacterial exposure in terms of absolute growth and detoxification activity. This genotype by treatment interaction may result in local adaptations to cyanobacterial exposure in P. fluviatilis. Hence, the sensitivity against cyanobacterial exposure may differ between within species populations increasing the importance of local management of fish populations.


Assuntos
Toxinas Marinhas/toxicidade , Microcistinas/toxicidade , Percas/microbiologia , Adaptação Fisiológica , Animais , Cianobactérias/metabolismo , Tolerância a Medicamentos , Exposição Ambiental , Água Doce/microbiologia , Genótipo , Geografia , Percas/genética , Percas/crescimento & desenvolvimento
17.
J Appl Microbiol ; 114(3): 636-43, 2013 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-23164054

RESUMO

AIM: To identify pathogen of diseased yellow perch and determine their virulence. METHODS AND RESULTS: Fifteen Gram-negative bacterial isolates were recovered from the skin lesions of diseased yellow perch (Perca flavescens). Based on API 20NE test, ten isolates were found to share 67.2-99.9% homologies with Chryseobactertium indologenes. Based on fatty acid methyl ester analysis, 13 isolates were found to share similarities with C. indologenes and other species of Chryseobacterium. Based on sequencing results of partial 16S rRNA gene, 13 isolates shared 99% identities (e value = 2e-50) with the 16S rRNA sequence of C. indologenes (GenBank HQ259684). Based on the 16S-23S rRNA intergenic spacer region (ISR) sequence, the 13 isolates shared 88% identity (e value = 1e-165) with the 16S-23S ISR sequence of C. indologenes (GenBank EU014570). T-coffee multiple sequence alignment revealed that the partial 16S rRNA or the 16S-23S ISR sequence of the 13 isolates shared 100% identity with each other. When healthy yellow perch were exposed to the 15 isolates by bath immersion (c. 6 × 10(7) CFU ml(-1) for 1 h), only C. indologenes isolates killed 10-20% of fish, whereas other isolates were avirulent. When yellow perch were exposed to C. indologenes by intraperitoneal injection, mortality was dose dependent, with LD(50) and LD(95) values of 1.5 × 10(8) and 3.2 × 10(8) CFU per fish, respectively. CONCLUSIONS: Chryseobactertium indologenes could be pathogenic to yellow perch. SIGNIFICANCE AND IMPACT OF THE STUDY: This is the first report on the isolation of C. indologenes from diseased yellow perch. Virulence studies suggested that C. indologenes could become pathogenic to yellow perch.


Assuntos
Chryseobacterium/classificação , Chryseobacterium/patogenicidade , Percas/microbiologia , Animais , Chryseobacterium/genética , Chryseobacterium/isolamento & purificação , DNA Bacteriano/genética , DNA Espaçador Ribossômico/genética , Ácidos Graxos/análise , Doenças dos Peixes/microbiologia , Infecções por Flavobacteriaceae/microbiologia , Infecções por Flavobacteriaceae/veterinária , RNA Ribossômico 16S/genética , RNA Ribossômico 23S/genética , Alinhamento de Sequência , Análise de Sequência de DNA , Pele/microbiologia , Virulência
18.
PLoS One ; 7(12): e52243, 2012.
Artigo em Inglês | MEDLINE | ID: mdl-23272228

RESUMO

Due to the importance of young-of-the-year (YOY) perch in the peri-alpine regions where they are consumed, the microcystin (MC) contamination of YOY perch was analysed both in field (Lake Bourget, France) and experimentally using force-feeding protocols with pure MCs. In-situ, schools of YOY perch present in the epilimnion of the lake were never found in direct contact with the P. rubescens blooms that were present in the metalimnion. However, MCs were detected in the muscles and liver of the fish and were thus assumed to reach YOY perch through dietary routes, particularly via the consumption of MC-containing Daphnia. Force-feeding experiment demonstrates the existence of MC detoxification/excretion processes and suggests that in situ, YOY perch could partly detoxify and excrete ingested MCs, thereby limiting the potential negative effects on perch populations under bloom conditions. However, because of chronic exposure these processes could not allow for the complete elimination of MCs. In both experimental and in situ studies, no histological change was observed in YOY perch, indicating that MC concentrations that occurred in Lake Bourget in 2009 were too low to cause histological damage prone to induce mortality. However, Deoxyribonucleic acid (DNA) damages were observed for both the high and low experimental MC doses, suggesting that similar effects could occur in situ and potentially result in perch population disturbance during cyanobacterial blooms. Our results indicate the presence of MCs in wild perch, the consumption of this species coming from Lake Bourget is not contested but more analyses are needed to quantify the risk.


Assuntos
Cianobactérias/metabolismo , Lagos , Microcistinas/metabolismo , Percas/metabolismo , Percas/microbiologia , Animais , Dano ao DNA , Ecossistema , França , Glutationa Transferase/metabolismo , Fígado/metabolismo , Músculos/metabolismo , Estações do Ano
19.
J Food Sci ; 77(12): M664-8, 2012 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-23106405

RESUMO

The biogenic amines (tyramine, histamine, cadaverine, and puterscine) and microbiological properties (mesophilic, psychrotrophic, and Pseudomonas spp.) of whole pike-perch (Sander lucioperca) was investigated during 2 d prestorage icing and 90 d frozen storage (-24 °C). At the end of ice storage, a noticeable increase only was found for puterscine level (P < 0.05), and microbial loads of fish increased in comparison with fresh fish (P < 0.05). During the frozen storage, as time passed, a continuous increase of biogenic amines and decrease of bacterial load (except for Pseudomonas spp. at the last 30 d) was detected (P < 0.05). The total contents of biogenic amines ranged from 6.24 to 91.76 µg/g during the investigated period. Puterscine was the major amine detected in pike-perch and its concentration varied between 1.75 and 56.95 µg/g; due to a more step-wise increase it was a good quality indicator. At the end of storage, all of the obtained values are below the tolerable maximum amounts based on available regulations. Based on biogenic amines content and microbial load, it could be concluded that pike-perch can be consumed without any health risks after 2 d icing condition and 90 d frozen storage.


Assuntos
Cadaverina/biossíntese , Qualidade de Produtos para o Consumidor , Esocidae/microbiologia , Armazenamento de Alimentos/métodos , Histamina/biossíntese , Percas/microbiologia , Animais , Cromatografia Líquida de Alta Pressão , Contagem de Colônia Microbiana , Contaminação de Alimentos/análise , Microbiologia de Alimentos , Congelamento , Pseudomonas/metabolismo , Pseudomonas/patogenicidade , Alimentos Marinhos/microbiologia
20.
Appl Biochem Biotechnol ; 167(5): 1280-9, 2012 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-22555500

RESUMO

The bacteriocins of lactic acid bacteria have considerable potential for biopreservation. The Lactococcus lactis strain PSY2 (GenBank account no. JF703669) isolated from the surface of marine perch Perca flavescens produced antibacterial activity against pathogenic and spoilage-causing Gram-positive and Gram-negative bacteria viz. Arthrobacter sp., Acinetobacter sp., Bacillus subtilis, Escherichia coli, Listeria monocytogenes, Pseudomonas aeruginosa and Staphylococcus aureus and possessed broad inhibitory spectrum. The biopreservative efficacy of the bacteriocin PSY2 was evaluated using fillets of reef cod, Epinephelus diacanthus. The fillets (10 g) were sprayed with 2.0 ml of 1,600 AU/ml bacteriocin, wrapped and kept under different storage temperatures viz., 4, 0 and -18 °C. The biopreservative extended the shelf-life of fillets stored at 4 °C to >21 days as against <14 days observed in the untreated samples. The total count of spoilage bacteria was reduced by 2.5 logarithmic units in the treated sample during the 14th day of storage as against the control. Chemical analysis revealed a significant change (P < 0.05) in the pH value, free fatty acid (as % oleic acid), total volatile base nitrogen and total methyl amine content in the treated samples. The overall acceptability in terms of sensory attributes was significantly higher in the bacteriocin-treated samples stored for 21 days at 4 °C while the untreated samples became unacceptable by the 14th day. The biopreservative gave no significant effect at -18 °C. Thus, the bacteriocin derived from L. lactis PSY2 gave increased protection against spoilage bacteria and offers an alternative for the preservation of high-value sea foods.


Assuntos
Bacteriocinas/biossíntese , Bacteriocinas/farmacologia , Armazenamento de Alimentos , Lactococcus lactis/isolamento & purificação , Lactococcus lactis/metabolismo , Percas/microbiologia , Temperatura , Animais , Antibacterianos/biossíntese , Antibacterianos/farmacologia , Bass/microbiologia , Ácidos Graxos não Esterificados/análise , Concentração de Íons de Hidrogênio , Ácido Láctico/metabolismo , Metilaminas/análise , Nitrogênio/análise , Nitrogênio/química , Odorantes/análise , Fatores de Tempo
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