Influence of depth, time and human activity on detection rate of acoustic tags: a case study on two fish farms.

The detection rates of stationary acoustic transmitters deployed at three depths on two Atlantic salmon Salmo salar cage farms for c. 2 months were investigated. Deployment depth, time of day, day of the year and specific incidences at the farm substantially affected the rate of signal detection by the receiver.

Drivers and annual estimates of marine wildlife entanglement rates: A long-term case study with Australian fur seals.

Methods of calculating wildlife entanglement rates are not standardised between studies and often ignore the influence of observer effort, confounding comparisons. From 1997-2013 we identified 359 entangled Australian fur seals at Seal Rocks, south-eastern Australia. Most entanglement materials originated from commercial fisheries; most frequently entangling pups and juveniles. Using Generalized Additive Mixed Models, which incorporated observer effort and survey frequency, we identified that entanglements were observed more frequently amongst pups from July to October as they approached weaning. Neither the decline in regional fishing intensity nor changing seal population size influenced the incidence of entanglements. Using the models, we estimated that 302 (95% CI=182-510) entangled seals were at Seal Rocks each year, equivalent to 1.0% (CI=0.6-1.7%) of the site population. This study highlights the influence of observer effort and the value of long-term datasets for determining the drivers of marine debris entanglements.

Drag of Clean and Fouled Net Panels--Measurements and Parameterization of Fouling.

Biofouling is a serious problem in marine aquaculture and it has a number of negative impacts including increased forces on aquaculture structures and reduced water exchange across nets. This in turn affects the behavior of fish cages in waves and currents and has an impact on the water volume and quality inside net pens. Even though these negative effects are acknowledged by the research community and governmental institutions, there is limited knowledge about fouling related effects on the flow past nets, and more detailed investigations distinguishing between different fouling types have been called for. This study evaluates the effect of hydroids, an important fouling organism in Norwegian aquaculture, on the forces acting on net panels. Drag forces on clean and fouled nets were measured in a flume tank, and net solidity including effect of fouling were determined using image analysis. The relationship between net solidity and drag was assessed, and it was found that a solidity increase due to hydroids caused less additional drag than a similar increase caused by change in clean net parameters. For solidities tested in this study, the difference in drag force increase could be as high as 43% between fouled and clean nets with same solidity. The relationship between solidity and drag force is well described by exponential functions for clean as well as for fouled nets. A method is proposed to parameterize the effect of fouling in terms of an increase in net solidity. This allows existing numerical methods developed for clean nets to be used to model the effects of biofouling on nets. Measurements with other types of fouling can be added to build a database on effects of the accumulation of different fouling organisms on aquaculture nets.

Large-Scale Examination of Spatio-Temporal Patterns of Drifting Fish Aggregating Devices (dFADs) from Tropical Tuna Fisheries of the Indian and Atlantic Oceans.

Since the 1990s, massive use of drifting Fish Aggregating Devices (dFADs) to aggregate tropical tunas has strongly modified global purse-seine fisheries. For the first time, a large data set of GPS positions from buoys deployed by French purse-seiners to monitor dFADs is analysed to provide information on spatio-temporal patterns of dFAD use in the Atlantic and Indian Oceans during 2007-2011. First, we select among four classification methods the model that best separates "at sea" from "on board" buoy positions. A random forest model had the best performance, both in terms of the rate of false "at sea" predictions and the amount of over-segmentation of "at sea" trajectories (i.e., artificial division of trajectories into multiple, shorter pieces due to misclassification). Performance is improved via post-processing removing unrealistically short "at sea" trajectories. Results derived from the selected model enable us to identify the main areas and seasons of dFAD deployment and the spatial extent of their drift. We find that dFADs drift at sea on average for 39.5 days, with time at sea being shorter and distance travelled longer in the Indian than in the Atlantic Ocean. 9.9% of all trajectories end with a beaching event, suggesting that 1,500-2,000 may be lost onshore each year, potentially impacting sensitive habitat areas, such as the coral reefs of the Maldives, the Chagos Archipelago, and the Seychelles.

A 'simple anterior fish excluder' (SAFE) for mitigating penaeid-trawl bycatch.

Various plastic strips and sheets (termed 'simple anterior fish excluders'-SAFEs) were positioned across the openings of penaeid trawls in attempts at reducing the unwanted bycatches of small teleosts. Initially, three SAFEs (a single wire without, and with small and large plastic panels) were compared against a control (no SAFE) on paired beam trawls. All SAFEs maintained targeted Metapenaeus macleayi catches, while the largest plastic SAFE significantly reduced total bycatch by 51% and the numbers of Pomatomus saltatrix, Mugil cephalus and Herklotsichthys castelnaui by up to 58%. A redesigned SAFE ('continuous plastic') was subsequently tested (against a control) on paired otter trawls, significantly reducing total bycatch by 28% and P. saltatrix and H. castelnaui by up to 42%. The continuous-plastic SAFE also significantly reduced M. macleayi catches by ~7%, but this was explained by ~5% less wing-end spread, and could be simply negated through otter-board refinement. Further work is required to refine the tested SAFEs, and to quantify species-specific escape mechanisms. Nevertheless, the SAFE concept might represent an effective approach for improving penaeid-trawl selectivity.

The 'W' prawn-trawl with emphasised drag-force transfer to its centre line to reduce overall system drag.

For prawn trawling systems, drag reduction is a high priority as the trawling process is energy intensive. Large benefits have occurred through the use of multiple-net rigs and thin twine in the netting. An additional positive effect of these successful twine-area reduction strategies is the reduced amount of otter board area required to spread the trawl systems, which leads to further drag reduction. The present work investigated the potential of redirecting the drag-strain within a prawn trawl away from the wings and the otter boards to the centre line of the trawl, where top and bottom tongues have been installed, with an aim to minimise the loading/size of the otter boards required to spread the trawl. In the system containing the new 'W' trawl, the drag redirected to the centre-line tongues is transferred forward through a connected sled and towing wires to the trawler. To establish the extent of drag redirection to the centre-line tongues and the relative drag benefits of the new trawl system, conventional and 'W' trawls of 3.65 m headline length were tested firstly over a range of spread ratios in the flume tank, and subsequently at optimum spread ratio in the field. The developed 'W' trawl effectively directed 64% of netting-drag off the wings and onto the centre tongues, which resulted in drag savings in the field of ∼20% for the associated 'W' trawl/otter-board/sled system compared to the traditional trawl/otter-board arrangement in a single trawl or twin rig configuration. Furthermore, based on previously published data, the new trawl when used in a twin rig system is expected to provide approximately 12% drag reduction compared to quad rig. The twin 'W' trawl system also has benefits over quad rig in that a reduced number of cod-end/By-catch Reduction Device units need to be installed and attended each tow.

Using a partial sum method and GPS tracking data to identify area restricted search by artisanal fishers at moored fish aggregating devices in the Commonwealth of Dominica.

Foragers must often travel from a central place to exploit aggregations of prey. These patches can be identified behaviorally when a forager shifts from travel to area restricted search, identified by a decrease in speed and an increase in sinuosity of movement. Faster, more directed movement is associated with travel. Differentiating foraging behavior at patches from travel to patches is important for a variety of research questions and has now been made easier by the advent of small, GPS devices that can track forager movement with high resolution. In the summer and fall of 2012, movement data were collected from GPS devices placed on foraging trips originating in the artisanal fishing village of Desa Ikan (pseudonym), on the east coast of the Caribbean island nation of the Commonwealth Dominica. Moored FADs are human-made structures anchored to the ocean floor with fish attraction material on or near the surface designed to effectively create a resource patch. The ultimate goal of the research is to understand how property rights are emerging after the introduction of fish aggregating device (FAD) technology at the site in 1999. This paper reports on research to identify area-restricted search foraging behavior at FAD patches. For 22 foraging trips simultaneous behavioral observations were made to ground-truth the GPS movement data. Using a cumulative sum method, area restricted search was identified as negative deviations from the mean travel speed and the method was able to correctly identify FAD patches in every case.

Understanding the sources and effects of abandoned, lost, and discarded fishing gear on marine turtles in northern Australia.

Globally, 6.4 million tons of fishing gear are lost in the oceans annually. This gear (i.e., ghost nets), whether accidently lost, abandoned, or deliberately discarded, threatens marine wildlife as it drifts with prevailing currents and continues to entangle marine organisms indiscriminately. Northern Australia has some of the highest densities of ghost nets in the world, with up to 3 tons washing ashore per kilometer of shoreline annually. This region supports globally significant populations of internationally threatened marine fauna, including 6 of the 7 extant marine turtles. We examined the threat ghost nets pose to marine turtles and assessed whether nets associated with particular fisheries are linked with turtle entanglement by analyzing the capture rates of turtles and potential source fisheries from nearly 9000 nets found on Australia's northern coast. Nets with relatively larger mesh and smaller twine sizes (e.g., pelagic drift nets) had the highest probability of entanglement for marine turtles. Net size was important; larger nets appeared to attract turtles, which further increased their catch rates. Our results point to issues with trawl and drift-net fisheries, the former due to the large number of nets and fragments found and the latter due to the very high catch rates resulting from the net design. Catch rates for fine-mesh gill nets can reach as high as 4 turtles/100 m of net length. We estimated that the total number of turtles caught by the 8690 ghost nets we sampled was between 4866 and 14,600, assuming nets drift for 1 year. Ghost nets continue to accumulate on Australia's northern shore due to both legal and illegal fishing; over 13,000 nets have been removed since 2005. This is an important and ongoing transboundary threat to biodiversity in the region that requires attention from the countries surrounding the Arafura and Timor Seas.

Mortality due to a retained circle hook in a longfin mako shark Isurus paucus (Guitart-Manday).

A female longfin mako shark Isurus paucus (Guitart-Manday, 1966) was found moribund on the Atlantic Ocean beach near Canaveral National Seashore, Florida; the shark died shortly after stranding. Macroscopic lesions included a partially healed bite mark on the left pectoral fin, a clefted snout, pericardial effusion and a pericardial mass surrounding a 12/0 circle fishing hook. The heart, pericardial mass, gills, ovary, oviduct, shell gland, epigonal organ, liver, kidney and intrarenal and interrenal glands were processed for histopathology and examined by brightfield microscopy. Microscopic examination revealed chronic proliferative and pyogranulomatous pericarditis and myocarditis with rhabdomyolysis, fibrosis and thrombosis; scant bacteria and multifocal granular deposits of iron were found intralesionally. In addition, acute, multifocal infarcts within the epigonal organ and gill filaments were found in association with emboli formed by necrocellular material. The ovary had high numbers of atretic follicles, and the liver had diffuse, severe hepatocellular degeneration, multifocal spongiosis and moderate numbers of melanomacrophage cells. This report provides evidence of direct mortality due to systemic lesions associated with retained fishing gear in a prohibited shark species. Due to the large numbers of sharks released from both recreational and commercial fisheries worldwide, impact of delayed post-release mortality on shark populations is an important consideration.

The contribution of nearshore fish aggregating devices (FADs) to food security and livelihoods in Solomon Islands.

Fish aggregating devices, or FADs, are used widely in developing countries to concentrate pelagic fish, making them easier to catch. Nearshore FADs anchored close to the coast allow access for rural communities, but despite their popularity among policy makers, there is a dearth of empirical analysis of their contributions to the supply of fish and to fisheries management. In this paper we demonstrate that nearshore FADs increased the supply of fish to four communities in Solomon Islands. Estimated total annual fish catch ranged from 4300 to 12,000 kg across the study villages, with nearshore FADs contributing up to 45% of the catch. While it is clear that FADs increased the supply of fish, FAD catch rates were not consistently higher than other fishing grounds. Villages with limited access to diverse or productive fishing grounds seemingly utilized FADs to better effect. Villagers believed FADs increased household income and nutrition, as well as providing a source of fish for community events. FADs were also perceived to increase intra-household conflict and reduce fishers' participation in community activities. FADs need to be placed within a broader rural development context and treated as another component in the diversified livelihoods of rural people; as with other livelihood options they bring trade-offs and risks.

Reproductive biology of Cetengraulis edentulus (Cuvier, 1829), the major fishery resource in Guanabara Bay, Brazil

Cetengraulis edentulus is a broadely distributed engraulid in Southwest Atlantic, currently accounting for the main fish species commercially exploited at Guanabara Bay, Brazil. This study aimed to extend the knowledge on reproduction of C. edentulus at Guanabara Bay and to test whether some descriptors of reproductive activity, especially the gonadosomatic index (GSI), and the index of reproductive activity (IRA) changed among seasons. A total of 978 C. edentulus specimens were retrieved from purse seine commercial landings at Conservas Rubi S.A. company, in São Gonçalo city, RJ. Subsamples of 90-120 individuals were collected from bimonthly yields between July 2010 (winter) and June 2011 (autumn). Most fish were adults (120-170 mm TL), in response to the high selectivity of commercial fisheries. All descriptors indicated a broad spawning period (late winter to spring), peaking in November, suggesting this is the critical period to protect C. edentulus stocks from overfishing at Guanabara Bay. Fecundity averaged 12,720 oocytes and was positively related to fish size, GSI and fullness index, indicating that preserving larger individuals (TL > 160 mm) could contribute significantly to the reproductive success of C. edentulus, since they produce more oocytes. Cetengraulis edentulus é um engraulídeo amplamente distribuído no Atlântico Sudoeste, sendo um importante recurso comercialmente explorado na baía de Guanabara, Brasil. O presente estudo teve como objetivo ampliar o conhecimento sobre a reprodução de C. edentulus na baía de Guanabara e testar quais descritores da atividade reprodutiva, especialmente o índice gonadossomático (IGS) e o índice de atividade reprodutiva (IAR) se modificaram ao longo das estações do ano. Um total de 978 indivíduos de C. edentulus foram capturados pelo método de rede de cerco da frota comercial no cais da empresa Conservas Rubi S.A., na cidade de São Gonçalo, RJ. Subamostras de 90-120 indivíduos de C. edentulus foram coletados bimestralmente durante o período de julho de 2010 (inverno) e junho de 2011 (outono). A maioria dos indivíduos foram adultos (120-170 mm CT), em resposta a alta seletividade das capturas comerciais. Todos os índices indicaram um amplo período reprodutivo (final do inverno e primavera), com pico em novembro, sugerindo que este seria um período crítico para preservar os estoques de C. edentulus da sobrepesca na baía de Guanabara. A fecundidade média foi de 12720 ovócitos e foi positivamente relacionada com tamanho do peixe, IGS e índice de repleção, indicando que preservar maiores indivíduos (CT > 160 mm) poderia contribuir significativamente para o sucesso reprodutivo de C. edentulus na área, visto que esses indivíduos produzem um maior número de ovócitos.

Effects of mesh size and escape gaps on discarding in an Australian giant mud crab (Scylla serrata) trap fishery.

In response to concerns over excessive discarding from Australian recreational round traps (with four funnel entrances) used to target giant mud crabs, Scylla serrata, an experiment was done to assess the independent and cumulative utility of paired, bottom-located horizontal escape gaps (46×120 mm) and increasing mesh size (from 51 to 101 mm). Compared to conventional traps comprising 51-mm mesh throughout, those with the same mesh size and escape gaps caught significantly fewer (by 95%) undersize (<85 mm carapace length--CL) crabs while maintaining legal catches. Traps made from 101-mm mesh (but with the same funnel entrances as conventional designs) and with and without escape gaps similarly retained fewer undersize crabs and also yellowfin bream Acanthopagrus australis (the key bycatch species) by up to 94%, but there were concomitant reductions in fishing power for legal sizes of S. serrata. Although there were no immediate mortalities among any discarded crabs, there was a greater bias towards wounding among post molts than late inter-molts and less damage to individuals in the 101-mm conventional than 51-mm conventional traps (without escape gaps). The results support retrospectively fitting escape gaps in conventional S. serrata traps as a means for reducing discarding, but additional work is required to determine appropriate mesh sizes/configurations that maximize species and size selectivity.

Management of gillnet fisheries in the south coast of the state of São Paulo, Brazil.

Gillnetting is one of the most practiced fishing methods adopted in the South of Brazil and has been increasingly expanding over the last years. This paper presents the characterization of the activity and discusses its management, in accordance to results from the discussions on the development of regulations on net fisheries in the South Coast Marine Protected Area (APAMLS) in the state of São Paulo. Gillnet fleets are formed by small-scale boats, with low autonomy, and lower fishing capacity, when compared to boats from other ports in the South and Southeast. However, the number of fishing units is high, reaching 1,709 units operating in the South coast of São Paulo in 2010. This kind of fleet uses several types of gillnets, and the activity may be classified according to the fishery type (industrial, coastal artisanal and estuarine artisanal). The activity was discussed in the APAMLS and the fishing industry, with the participation of all segments, and a proposal for gillnetting regulation was reached. The results suggested that gillnet length for industrial fisheries should be reduced by 30%. It must be emphasized that without effective inspection measures leading the fishing industry to believe in the enforcement of the proposal, private interests of the most influential political sectors may cause the process to retrocede.

Size selection of Antarctic krill (Euphausia superba) in trawls.

Trawlers involved in the Antarctic krill (Euphausia superba) fishery use different trawl designs, and very little is known about the size selectivity of the various gears. Size selectivity quantifies a given trawl's ability to catch different sizes of a harvested entity, and this information is crucial for the management of a sustainable fishery. We established a morphological description of krill and used it in a mathematical model (FISHSELECT) to predict the selective potential of diamond meshes measuring 5-40 mm with mesh opening angles (oa) ranging from 10 to 90°. We expected the majority of krill to encounter the trawl netting in random orientations due to high towing speeds and the assumed swimming capabilities of krill. However, our results indicated that size selectivity of krill is a well-defined process in which individuals encounter meshes at an optimal orientation for escapement. The simulation-based results were supported by data from experimental trawl hauls and underwater video images of the mesh geometry during fishing. Herein we present predictions for the size selectivity of a range of netting configurations relevant to the krill fishery. The methods developed and results described are important tools for selecting optimal trawl designs for krill fishing.