Your browser doesn't support javascript.
loading
Mostrar: 20 | 50 | 100
Resultados 1 - 20 de 35
Filtrar
1.
J Microbiol Methods ; 175: 105961, 2020 08.
Artigo em Inglês | MEDLINE | ID: mdl-32479869

RESUMO

Quantifying growth kinetics of specific spoilage microorganisms in mixed culture is required to describe the evolution of food microbiomes. A qPCR method was developed to selectively amplify individual meat spoilage bacteria, Carnobacterium maltaromaticum, Brochothrix thermosphacta and Serratia liquefaciens, within a broth medium designed to simulate the composition of beef. An optimized method of DNA extraction was produced for standard curve construction. Method specificity was determined by individual single peaks in melt curves. Reaction efficiency for standard curves of C. maltaromaticum, B. thermosphacta and S. liquefaciens was high (R2 = 0.98-0.99), and linear quantification was achieved over a 5 log CFU/ml range. Coefficient of variation was calculated considering both threshold cycle (Ct) and bacterial concentration; the value did not exceed 14% for inter- or intra-runs for either method. Comparison of growth kinetic parameters derived from plate count and qPCR showed no significant variation (P > .05) for growth rate (GR) and maximum population density (MPD); lag phase duration (LPD) was not included in this comparison due to high innate variability. Log quantification of each isolate was validated in a mixed-culture experiment for all three species with qPCR and plate count differing less than 0.3 log CFU/ml (average 0.10 log CFU/ml, R2 = 0.98).


Assuntos
Brochothrix , Carnobacterium , Microbiologia de Alimentos/métodos , Carne/microbiologia , Reação em Cadeia da Polimerase/métodos , Serratia liquefaciens , Animais , Brochothrix/crescimento & desenvolvimento , Brochothrix/isolamento & purificação , Carnobacterium/crescimento & desenvolvimento , Carnobacterium/isolamento & purificação , Bovinos , Inocuidade dos Alimentos/métodos , Serratia liquefaciens/crescimento & desenvolvimento , Serratia liquefaciens/isolamento & purificação
2.
Ecotoxicol Environ Saf ; 195: 110375, 2020 Jun 01.
Artigo em Inglês | MEDLINE | ID: mdl-32200142

RESUMO

Microbial immobilization is a novel and environmentally friendly technology that uses microbes to reduce metal availability in soil and accumulation of heavy metals in plants. We used urea agar plates to isolate urease-producing bacteria from the rhizosphere soil of pakchoi in Cd- and Pb-contaminated farmland and investigated their effects on Cd and Pb accumulation in pakchoi and the underlying mechanisms. The results showed that two urease-producing bacteria, Bacillus megaterium N3 and Serratia liquefaciens H12, were identified by screening. They had higher ability to produce urease (57.5 ms cm-1 min-1 OD600-1 and 76.4 ms cm-1 min-1 OD600-1, respectively). The two strains allowed for the immobilization of Cd and Pb by extracellular adsorption, bioprecipitation, and increasing the pH (from 6.94 to 7.05-7.09), NH4+ content (69.1%-127%), and NH4+/NO3- ratio (from 1.37 to 1.67-2.11), thereby reducing the DTPA-extractable Cd (35.3%-58.8%) and Pb (37.8%-62.2%) contents in the pakchoi rhizosphere soils and the Cd (76.5%-79.7%) and Pb (76.3%-83.5%) contents in the leaves (edible tissue) of pakchoi. The strains were highly resistant to heavy metal toxicity; produced IAA, siderophores and abscisic acid; and increased the NH4+/NO3- ratio, which might be related to the two strains protectiing pakchoi against the toxic effect of Cd and Pb and increasing pakchoi biomass. Thus, the results were supposed to strain resources and a theoretical basis for the remediation of Cd- and Pb-contaminated farmlands for the safe production of vegetables.


Assuntos
Bacillus megaterium/isolamento & purificação , Brassica/crescimento & desenvolvimento , Cádmio/análise , Chumbo/análise , Serratia liquefaciens/isolamento & purificação , Microbiologia do Solo , Poluentes do Solo/análise , Bacillus megaterium/metabolismo , Biodegradação Ambiental , Biomassa , Brassica/metabolismo , Cádmio/metabolismo , Fazendas , Chumbo/metabolismo , Rizosfera , Serratia liquefaciens/metabolismo , Solo/química , Poluentes do Solo/metabolismo , Urease/metabolismo
3.
Int J Mol Sci ; 21(2)2020 Jan 16.
Artigo em Inglês | MEDLINE | ID: mdl-31963214

RESUMO

The mechanisms of action of the complex including entomopathogenic nematodes of the genera Steinernema and Heterorhabditis and their mutualistic partners, i.e., bacteria Xenorhabdus and Photorhabdus, have been well explained, and the nematodes have been commercialized as biological control agents against many soil insect pests. However, little is known regarding the nature of the relationships between these bacteria and the gut microbiota of infected insects. In the present study, 900 bacterial isolates that were obtained from the midgut samples of Melolontha melolontha larvae were screened for their antagonistic activity against the selected species of the genera Xenorhabdus and Photorhabdus. Twelve strains exhibited significant antibacterial activity in the applied tests. They were identified based on 16S rRNA and rpoB, rpoD, or recA gene sequences as Pseudomonas chlororaphis, Citrobacter murliniae, Acinetobacter calcoaceticus, Chryseobacterium lathyri, Chryseobacterium sp., Serratia liquefaciens, and Serratia sp. The culture filtrate of the isolate P. chlororaphis MMC3 L3 04 exerted the strongest inhibitory effect on the tested bacteria. The results of the preliminary study that are presented here, which focused on interactions between the insect gut microbiota and mutualistic bacteria of entomopathogenic nematodes, show that bacteria inhabiting the gut of insects might play a key role in insect resistance to entomopathogenic nematode pressure.


Assuntos
Larva/microbiologia , Photorhabdus/genética , Photorhabdus/isolamento & purificação , Xenorhabdus/genética , Xenorhabdus/isolamento & purificação , Acinetobacter calcoaceticus/genética , Acinetobacter calcoaceticus/isolamento & purificação , Animais , Chryseobacterium/genética , Chryseobacterium/isolamento & purificação , Citrobacter/genética , Citrobacter/isolamento & purificação , Microbioma Gastrointestinal/genética , Microbioma Gastrointestinal/fisiologia , Pseudomonas chlororaphis/genética , Pseudomonas chlororaphis/isolamento & purificação , RNA Ribossômico 16S/genética , Serratia liquefaciens/genética , Serratia liquefaciens/isolamento & purificação , Simbiose/genética , Simbiose/fisiologia
4.
Lett Appl Microbiol ; 70(4): 259-262, 2020 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-31872893

RESUMO

An incident of sudden deaths in the breeding stock was reported from a farrow-to-finish commercial pig farm in Greece. The 8·4% of sows during lactation and gestation period presented anorexia, fever, haematuria, return-to-oestrus and sudden deaths (mortality rate: 2·3%). Blood and urine samples were collected from four diseased sows. Furthermore, swabs from urine bladders were collected from two dead sows and four culled sows at the slaughterhouse. Blood testing demonstrated mild leucocytosis and absence of azotaemia. Urinalysis revealed haematuria, proteinuria, bilirubinuria and active urine sediment with bacilli, epithelial cells and leucocytes, crystals and granular casts. Histopathological evaluation of the bladder demonstrated chronic active polypoid cystitis. The bacterial culture revealed the presence of Serratia liquefaciens. The antibiotic susceptibility testing showed high resistance to the most common antibiotics, with the highest sensitivity of the isolate towards quinolones. After the administration of a single dose of 7·5 mg kg-1 body weight enrofloxacin intramuscularly, the mortality rate decreased to less than 0·5% along with a remarkable reduction in the severity of clinical signs. Based on our findings, S. liquefaciens induced severe clinical signs and deaths in sows, mainly due to urinary infection. Inadequate water sanitation might have been responsible for increased exposure to S. liquefaciens. SIGNIFICANCE AND IMPACT OF THE STUDY: In this study, the isolation of Serratia liquefaciens from the urinary tract of pigs associated with clinical signs and increased mortality was described for the first time. Serratia liquefaciens is an important cause of hospital-acquired human infections. The isolate in this study was resistant to the most common antibiotics. Therefore, the use of quinolones which are drugs of last resort for treatment of infections was the only therapeutic option. The presence of the resistant bacterium in the urinary tract raises concerns for its zoonotic potential.


Assuntos
Infecções por Serratia/veterinária , Serratia liquefaciens/fisiologia , Doenças dos Suínos/microbiologia , Infecções Urinárias/veterinária , Animais , Antibacterianos/farmacologia , Farmacorresistência Bacteriana , Grécia , Infecções por Serratia/microbiologia , Serratia liquefaciens/efeitos dos fármacos , Serratia liquefaciens/genética , Serratia liquefaciens/isolamento & purificação , Suínos , Doenças dos Suínos/patologia , Infecções Urinárias/microbiologia , Infecções Urinárias/patologia
5.
Sci Rep ; 9(1): 18006, 2019 11 29.
Artigo em Inglês | MEDLINE | ID: mdl-31784663

RESUMO

Serratia liquefaciens strain FG3 (SlFG3), isolated from the flower of Stachytarpheta glabra in the Brazilian ferruginous fields, has distinctive genomic, adaptive, and biotechnological potential. Herein, using a combination of genomics and molecular approaches, we unlocked the evolution of the adaptive traits acquired by S1FG3, which exhibits the second largest chromosome containing the largest conjugative plasmids described for Serratia. Comparative analysis revealed the presence of 18 genomic islands and 311 unique protein families involved in distinct adaptive features. S1FG3 has a diversified repertoire of genes associated with Nonribosomal peptides (NRPs/PKS), a complete and functional cluster related to cellulose synthesis, and an extensive and functional repertoire of oxidative metabolism genes. In addition, S1FG3 possesses a complete pathway related to protocatecuate and chloroaromatic degradation, and a complete repertoire of genes related to DNA repair and protection that includes mechanisms related to UV light tolerance, redox process resistance, and a laterally acquired capacity to protect DNA using phosphorothioation. These findings summarize that SlFG3 is well-adapted to different biotic and abiotic stress situations imposed by extreme conditions associated with ferruginous fields, unlocking the impact of the lateral gene transfer to adjust the genome for extreme environments, and providing insight into the evolution of prokaryotes.


Assuntos
Aclimatação/genética , Evolução Biológica , Extremófilos/genética , Lamiales/microbiologia , Serratia liquefaciens/genética , Brasil , Ambientes Extremos , Extremófilos/isolamento & purificação , Flores/microbiologia , Genes Bacterianos , Ilhas Genômicas , Genômica , Filogenia , Plasmídeos/genética , Serratia liquefaciens/isolamento & purificação
6.
Transfusion ; 59(12): 3674-3682, 2019 12.
Artigo em Inglês | MEDLINE | ID: mdl-31608457

RESUMO

BACKGROUND: Whole blood (WB) is held at room temperature for not more than 24 hours before blood component manufacturing. The ability of several culture collection, skin-derived, and transfusion-related bacteria to survive in WB stored at 22 ± 2°C for 24 hours was investigated in this study. STUDY DESIGN AND METHODS: Twenty-one bacteria of the species Staphylococcus epidermidis, Staphylococcus aureus, Staphylococcus capitis, Streptococcus agalactiae, Serratia liquefaciens, Serratia marcescens, Klebsiella pneumoniae, Escherichia coli, and Yersinia enterocolitica were inoculated into 7-mL aliquots of WB at a concentration of 500 colony-forming units (CFU)/mL. Spiked WB was stored aerobically at 22 ± 2°C, and bacterial viability and growth were monitored at 3, 8, and 24 hours during WB storage. Bacteria that showed decreased viability during WB incubation were further characterized for their sensitivity to plasma factors and neutrophil killing. RESULTS: There were three different scenarios for bacterial behavior during the hold of WB at 22 ± 2°C. Five bacteria proliferated (p < 0.03), 11 remained viable or showed low proliferation, and a third group of five bacteria had decreased or lost viability (p < 0.01). Three of the latter five bacteria were plasma-sensitive while the other two were plasma-resistant but susceptible to neutrophil killing (p = 0.01). CONCLUSIONS: The bactericidal activity of WB can be the result of plasma sensitivity or neutrophil killing. Bacteria with a starting inoculum of 500 CFU/mL, and able to resist WB immune factors, can proliferate to clinically significant levels posing a potential safety risk to transfusion patients. Results of this pilot study should be validated under standard WB collection and storage conditions.


Assuntos
Preservação de Sangue/métodos , Neutrófilos/fisiologia , Plasma/microbiologia , Plaquetas/microbiologia , Eritrócitos/microbiologia , Escherichia coli/isolamento & purificação , Humanos , Klebsiella pneumoniae/isolamento & purificação , Leucócitos/microbiologia , Viabilidade Microbiana , Serratia liquefaciens/isolamento & purificação , Serratia marcescens/isolamento & purificação , Staphylococcus aureus/isolamento & purificação , Staphylococcus capitis/isolamento & purificação , Staphylococcus epidermidis/isolamento & purificação , Streptococcus agalactiae/isolamento & purificação , Yersinia enterocolitica/isolamento & purificação
7.
Saudi J Kidney Dis Transpl ; 30(3): 738-740, 2019.
Artigo em Inglês | MEDLINE | ID: mdl-31249244

RESUMO

Peritoneal dialysis (PD) peritonitis has been decreasing in frequency in recent years. However, it still causes significant morbidity and mortality. Nearly 1%-6% of all peritonitis attacks result in death. Hospitalizations, loss of PD access, and intravascular catheter insertion for hemodialysis are some examples of morbidity. Approximately 15%-20% of the infectious mortality of PD patients is attributed to peritonitis. The responsible pathogens are usually Gram-positive bacteria, but unusual pathogens may be present. Prognosis is worse when Gram-negative and fungal pathogens are involved. We report a case of Serratia liquefaciens peritonitis due to defiance of hygienic practices which presented with severe abdominal pain and fever and led to loss of PD access.


Assuntos
Diálise Peritoneal/efeitos adversos , Peritonite/microbiologia , Infecções por Serratia/microbiologia , Serratia liquefaciens/isolamento & purificação , Idoso , Antibacterianos/uso terapêutico , Evolução Fatal , Humanos , Masculino , Peritonite/diagnóstico , Peritonite/tratamento farmacológico , Diálise Renal/efeitos adversos , Infecções por Serratia/diagnóstico , Infecções por Serratia/tratamento farmacológico , Resultado do Tratamento
8.
Pesqui. vet. bras ; 39(3): 201-208, Mar. 2019. tab
Artigo em Inglês | LILACS, VETINDEX | ID: biblio-1002799

RESUMO

This study aimed to verify the presence of members from the Enterobacteriaceae family and determine antimicrobial susceptibility profiles of the isolates in canaries bred in northeastern Brazil; in addition, the presence of diarrheagenic Escherichia coli (DEC) and avian pathogenic Escherichia coli (APEC) was also verified in these birds. Samples were collected during an exhibition organized by the Brazilian Ornithological Federation in July 2015 in Fortaleza, Brazil. A total of 88 fecal samples were collected and submitted to pre-enrichment step using buffered peptone water, followed by enrichment with the following broths: brain-heart infusion, Rappaport-Vassiliadis, and Selenite-Cystine. Subsequently, aliquots were streaked on MacConkey, brilliant green and salmonella-shigella agar plates. Colonies were selected according to morphological characteristics and submitted to biochemical identification and antimicrobial susceptibility tests with disk-diffusion technique. E. coli strains were evaluated for the presence of eight DEC genes and five APEC genes through conventional polymerase chain reaction (PCR) screening. The most frequent species observed were Pantoea agglomerans (25%), Serratia liquefaciens (12.5%), and Enterobacter aerogenes (9.1%). A single rough strain of Salmonella enterica subsp. enterica was identified in one sample (1.1%). High resistance rates to amoxicillin (78.7%) and ampicillin (75.4%) were identified. Polymyxin B (9.8%), gentamycin (6.6%), and enrofloxacin (6.6%) were the most efficient antibiotics. The total number of multidrug-resistant strains (isolates resistant to more than three antimicrobial classes) was 23 (37.7%). Four E. coli strains were tested for the virulence genes, and two were positive for APEC virulence genes: one strain was positive for iutA and the other for hlyF. In conclusion, canaries in northeastern Brazil participating in exhibitions may present Salmonella spp., Escherichia coli and other enterobacteria in the intestinal microbiota with antimicrobial resistance. These results indicate that, although the E. coli strains recovered from canaries in this study have some virulence genes, they still do not fulfill all the requirements to be considered APEC.(AU)


O objetivo deste trabalho foi verificar a presença de enterobactérias e determinar o perfil de sensibilidade aos antimicrobianos dos isolados oriundos de canários belgas criados em cativeiro do Nordeste do Brasil, adicionalmente verificou-se a presença de Escherichia coli diarreiogênicas (DEC) e E. coli patogênica aviária (APEC) nesses animais. A colheita das amostras ocorreu durante uma exposição de canários belgas organizada pela Federação Ornitológica do Brasil (FOB), em julho de 2015, na cidade de Fortaleza, Ceará, Brasil. Um total de 88 amostras de fezes foram coletadas e submetidas a pré-enriquecimento utilizando água peptonada, caldo de enriquecimento Brain Heart Infusion, Rappaport-Vassiliadis e Selenito-Cistina. Fez-se triagem em placas de ágar MacConkey, Verde Brilhante e ágar Salmonella Shigella. As colônias foram selecionadas e submetidas à identificação bioquímica e susceptibilidade antimicrobiana. Estirpes de Escherichia coli foram avaliadas quanto a presença de 8 genes de virulência de DEC e cinco de APEC por reação em cadeia da polimerase convencional (PCR). As enterobactérias encontradas com maior frequência foram Pantoea agglomerans (25%), Serratia liquefaciens (12,5%) e Enterobacter aerogenes (9,1%). Uma única estirpe de Salmonella enterica subsp. enterica (rugosa) esteve presente em um dos isolados (1,1%). Altos percentuais de resistência foram encontrados para dois antibióticos: amoxicilina (78,7%) e ampicilina (75,4%). Polimixina B (9,8%), gentamicina (6,8%) e enrofloxacina (6,5%) foram os antibióticos com melhor eficiência. O total de estirpes multirresistentes (a mais de três classes de antimicrobianos) foi de 23 (37,7%). Das quatro estirpes de E. coli isoladas, duas foram positivas para os genes de APEC, sendo uma estipe para o gene iss e outra para os genes iutA e hlyF. Portanto, canários belgas criados em cativeiro no Brasil que participam de exposições podem apresentar Salmonella spp., Escherichia coli e outras enterobactérias em sua microbiota intestinal com resistência antimicrobiana. Estes resultados indicam que as estirpes de E. coli isoladas de canário belga no presente estudo apresentam alguns, mas não todos, genes de virulência para serem caracterizadas como E. coli patogênica para aves (APEC).(AU)


Assuntos
Animais , Canários/microbiologia , Resistência Microbiana a Medicamentos , Salmonella enterica/isolamento & purificação , Pantoea/isolamento & purificação , Serratia liquefaciens/isolamento & purificação , Enterobacteriaceae/isolamento & purificação , Infecções por Enterobacteriaceae/veterinária , Escherichia coli/isolamento & purificação , Virulência , Enterobacter aerogenes/isolamento & purificação
9.
Int Heart J ; 59(6): 1485-1487, 2018 Nov 28.
Artigo em Inglês | MEDLINE | ID: mdl-30369570

RESUMO

Infective endocarditis (IE) caused by Serratia liquefaciens has been reported in only 2 adults. We experienced the first pediatric (neonatal) case of IE caused by S. liquefaciens, with mitral valve vegetation 4 days after a palliative heart surgery. This report underscores the importance of treating for both gram-positive and gram-negative bacteria in IE cases until the blood cultures elucidate the details.


Assuntos
Endocardite Bacteriana/diagnóstico , Infecções por Serratia/diagnóstico , Serratia liquefaciens/isolamento & purificação , Endocardite Bacteriana/microbiologia , Feminino , Humanos , Recém-Nascido
11.
Genet Mol Res ; 16(2)2017 May 18.
Artigo em Inglês | MEDLINE | ID: mdl-28525654

RESUMO

Wild mouse feces can disseminate zoonotic microorganisms throughout a farm, which is a great threat to human health and can lead to economic loss through contaminated agricultural produce. To assess the microbial communities, especially fecal coliform bacteria, we used two methods. First, we isolated bacterial colonies onto the common media LB (lactose broth) agar, TSA (tryptic soy agar), and MRS (de Man, Rogosa, and Sharpe) agar, and then randomly select colonies from each plate and stocked them to the mother plate for genomic DNA isolation. Second, we analyzed bacterial colonies using the 16S rRNA gene molecular diagnostic method. Based on bacterial cultures and bacterial 16S rRNA gene markers, we detected four different bacterial species (Bacillus amyloliquefaciens, Escherichia coli, Staphylococcus xylosus, and Serratia liquefaciens) from fecal coliforms of the striped field mouse Apodemus agrarius and A. peninsulae in agricultural areas in South Korea. These results could help us to better understand the pathogen reservoirs of mice and initiate some preventive measures to mitigate the microbial risks associated with mouse fecal matter in agricultural production areas.


Assuntos
Microbiota , Murinae/microbiologia , Animais , Bacillus amyloliquefaciens/genética , Bacillus amyloliquefaciens/isolamento & purificação , Escherichia coli/genética , Escherichia coli/isolamento & purificação , Fezes/microbiologia , RNA Ribossômico 16S/genética , República da Coreia , Serratia liquefaciens/genética , Serratia liquefaciens/isolamento & purificação , Staphylococcus/genética , Staphylococcus/isolamento & purificação
13.
Food Microbiol ; 63: 139-146, 2017 May.
Artigo em Inglês | MEDLINE | ID: mdl-28040161

RESUMO

Microorganisms play an important role in the spoilage of chilled chicken. In this study, a total of 53 isolates, belonging to 7 species of 3 genera, were isolated using a selective medium based on the capacity to spoil chicken juice. Four isolates, namely Aeromonas salmonicida 35, Pseudomonas fluorescens H5, Pseudomonas fragi H8 and Serratia liquefaciens 17, were further characterized to assess their proteolytic activities in vitro using meat protein extracts and to evaluate their spoilage potential in situ. The in vitro studies showed that A. salmonicida 35 displayed the strongest proteolytic activity against both sarcoplasmic and myofibrillar proteins. However, the major spoilage isolate in situ was P. fragi H8, which exhibited a fast growth rate, slime formation and increased pH and total volatile basic nitrogen (TVBN) on chicken breast fillets. The relative amounts of volatile organic compounds (VOCs) originating from the microorganisms, including alcohols, aldehydes, ketones and several sulfur compounds, increased during storage. In sum, this study demonstrated the characteristics of 4 potential spoilage bacteria on chilled yellow-feather chicken and provides a simple and convenient method to assess spoilage bacteria during quality management.


Assuntos
Aeromonas salmonicida/metabolismo , Galinhas/microbiologia , Aves Domésticas/microbiologia , Pseudomonas/metabolismo , Refrigeração , Serratia liquefaciens/metabolismo , Aeromonas salmonicida/crescimento & desenvolvimento , Aeromonas salmonicida/isolamento & purificação , Animais , Microbiologia de Alimentos , Armazenamento de Alimentos , Proteólise , Pseudomonas/crescimento & desenvolvimento , Pseudomonas fluorescens/crescimento & desenvolvimento , Pseudomonas fluorescens/isolamento & purificação , Pseudomonas fluorescens/metabolismo , Pseudomonas fragi/crescimento & desenvolvimento , Pseudomonas fragi/isolamento & purificação , Pseudomonas fragi/metabolismo , Serratia liquefaciens/crescimento & desenvolvimento , Serratia liquefaciens/isolamento & purificação , Compostos Orgânicos Voláteis/análise
15.
J Infect Dev Ctries ; 10(8): 791-8, 2016 Aug 31.
Artigo em Inglês | MEDLINE | ID: mdl-27580323

RESUMO

INTRODUCTION: Healthcare-associated infections (HAIs) are better documented in developed than in developing countries. There are emerging reports regarding the high frequency of HAIs in developing countries. We aimed to report an outbreak of an HAI caused by Serratia liquefaciens at a rural health center in The Gambia. METHODOLOGY: Following an abrupt increase in the isolation of S. liquefaciens in clinical samples, laboratory and clinical consumables, as well as staff, were screened for contamination with S. liquefaciens. Conventional microbiological techniques and biochemical identification tests were used. A phenotypic typing was achieved using the Kirby-Bauer antibiotic susceptibility method. Strategies to control the outbreak were implemented. RESULTS: A total of 794 samples were processed during the outbreak; 44 (6%) grew S. liquefaciens. Five (25%) of the 20 suspected contaminated materials (hospital consumables and equipment) screened yielded growth of the organism. The primary source of the outbreak was hospital consumables. Three (7%) of the 44 infected children died with no other known cause than S. liquefaciens infection. Ninety-nine percent similarity of the antibiogram phenotypic typing suggests the isolates were from the same clonal origin. The outbreak was successfully controlled after the removal and sterilization of the respective contaminated fluids and equipment. CONCLUSIONS: This HAI was caused by poor practice in the preparation of medications for nebulization and intravenous infusion, hygiene practices, and a lack of awareness among staff about infection control. We recommend further studies to delineate the role played by HAIs in the developing world.


Assuntos
Infecção Hospitalar/epidemiologia , Surtos de Doenças , Microbiologia Ambiental , Infecções por Serratia/epidemiologia , Serratia liquefaciens/isolamento & purificação , Atitude do Pessoal de Saúde , Técnicas Bacteriológicas , Pré-Escolar , Infecção Hospitalar/microbiologia , Contaminação de Medicamentos , Contaminação de Equipamentos , Feminino , Gâmbia/epidemiologia , Humanos , Lactente , Recém-Nascido , Masculino , Competência Profissional , Serviços de Saúde Rural , Infecções por Serratia/microbiologia
16.
Microb Ecol ; 72(2): 324-46, 2016 08.
Artigo em Inglês | MEDLINE | ID: mdl-27138047

RESUMO

Mine tailings are man-made environments characterized by low levels of organic carbon and assimilable nitrogen, as well as moderate concentrations of heavy metals. For the introduction of nitrogen into these environments, a key role is played by ammonia-oligotrophic/diazotrophic heavy metal-resistant guilds. In mine tailings from Zacatecas, Mexico, Serratia liquefaciens was the dominant heterotrophic culturable species isolated in N-free media from bulk mine tailings as well as the rhizosphere, roots, and aerial parts of pioneer plants. S. liquefaciens strains proved to be a meta-population with high intraspecific genetic diversity and a potential to respond to these extreme conditions. The phenotypic and genotypic features of these strains reveal the potential adaptation of S. liquefaciens to oligotrophic and nitrogen-limited mine tailings with high concentrations of heavy metals. These features include ammonia-oligotrophic growth, nitrogen fixation, siderophore and indoleacetic acid production, phosphate solubilization, biofilm formation, moderate tolerance to heavy metals under conditions of diverse nitrogen availability, and the presence of zntA, amtB, and nifH genes. The acetylene reduction assay suggests low nitrogen-fixing activity. The nifH gene was harbored in a plasmid of ∼60 kb and probably was acquired by a horizontal gene transfer event from Klebsiella variicola.


Assuntos
Amônia/análise , Metais Pesados/análise , Mineração , Filogenia , Raízes de Plantas/microbiologia , Serratia liquefaciens/classificação , Biofilmes , DNA Bacteriano/genética , Genes Bacterianos , Variação Genética , Concentração de Íons de Hidrogênio , Ácidos Indolacéticos/análise , Metagenômica , México , Testes de Sensibilidade Microbiana , Fixação de Nitrogênio , RNA Ribossômico 16S/genética , Rizosfera , Serratia liquefaciens/genética , Serratia liquefaciens/isolamento & purificação , Microbiologia do Solo , Estresse Fisiológico
17.
Lett Appl Microbiol ; 63(1): 30-7, 2016 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-27125750

RESUMO

UNLABELLED: In this study, we identified five strains isolated from soil and sediments able to degrade kraft lignin, aromatic dyes and lignin derivatives. Using 16S rRNA gene sequencing, the isolates were identified as Serratia sp. JHT01, Serratia liquefacien PT01, Pseudomonas chlororaphis PT02, Stenotrophomonas maltophilia PT03 and Mesorhizobium sp. PT04. All the isolates showed significant growth on lignin with no water-extractable compounds. Synthetic aromatic dyes were used to assess the presence of oxidative enzymes. All the isolates were able to use the thiazine dye Methylene blue and the anthraquinone dye Remazol Brilliant Blue R as the sole carbon source. Guaiacol, veratryl alcohol and biphenyl were also mineralized by all the strains isolated. These results suggest they could be used for the treatment of aromatic pollutants and for the degradation of the lignocellulosic biomass. SIGNIFICANCE AND IMPACT OF THE STUDY: The valorization of waste lignin and lignocellulosic biomass by biocatalysis opens up new possibilities for the production of value-added substituted aromatics, biofuel and for the treatment of aromatic pollutants. Bacteria with ligninolytic potential could be a source of novel enzymes for controlled lignin depolymerization. In this work, five soil bacteria were isolated and studied. Every isolate showed significant growth on lignin and was able to degrade several lignin monomers and ligninolytic indicator dyes. They could thus be a source of novel ligninolytic enzymes as well as candidates for a bacterial consortium for the delignification of lignocellulosic biomass.


Assuntos
Biodegradação Ambiental , Corantes/metabolismo , Lignina/metabolismo , Mesorhizobium/metabolismo , Pseudomonas chlororaphis/metabolismo , Serratia liquefaciens/metabolismo , Stenotrophomonas maltophilia/metabolismo , Antraquinonas/metabolismo , Álcoois Benzílicos/metabolismo , Biocombustíveis , Biomassa , Compostos de Bifenilo/metabolismo , Guaiacol/metabolismo , Mesorhizobium/genética , Mesorhizobium/isolamento & purificação , Azul de Metileno/metabolismo , Pseudomonas chlororaphis/genética , Pseudomonas chlororaphis/isolamento & purificação , RNA Ribossômico 16S/genética , Serratia liquefaciens/genética , Serratia liquefaciens/isolamento & purificação , Microbiologia do Solo , Stenotrophomonas maltophilia/genética , Stenotrophomonas maltophilia/isolamento & purificação
18.
Int J Food Microbiol ; 222: 65-71, 2016 Apr 02.
Artigo em Inglês | MEDLINE | ID: mdl-26874224

RESUMO

The cold storage of raw milk before heat treatment in dairy industry promotes the growth of psychrotrophic microorganisms, which are known for their ability to produce heat-resistant proteolytic enzymes. Although Pseudomonas is described as the main causative genus for high proteolytic spoilage potential in dairy products, Serratia liquefaciens secretes proteases and may be found in raw milk samples as well. However, at the present there is no information about the proteolytic spoilage potential of S. liquefaciens in milk after heat-treatment. The main aim of this research was to assess the proteolytic spoilage potential of S. liquefaciens isolated from Brazilian raw milk and to characterize the involved protease. S. liquefaciens was shown to secrete one heat-resistant spoilage metalloprotease of, approximately, 52 kDa encoded by the ser2 gene. The heat-resistance of Ser2 was similar to the aprX encoded metalloprotease produced by Pseudomonas. Although the ser2 gene was detected in all S. liquefaciens isolates tested in this study, the proteolytic activity of the isolates in milk was highly heterogeneous. Since nucleotide and deduced amino acid sequences of ser2 of all tested isolates are identical, this heterogeneity may be attributed to differences in enzyme expression levels or post-translational modifications.


Assuntos
Endopeptidases/metabolismo , Microbiologia de Alimentos , Temperatura Alta , Leite/microbiologia , Serratia liquefaciens/enzimologia , Animais , Brasil , Temperatura Baixa , Pseudomonas/enzimologia , Serratia liquefaciens/isolamento & purificação
19.
J Hazard Mater ; 305: 190-199, 2016 Mar 15.
Artigo em Inglês | MEDLINE | ID: mdl-26686478

RESUMO

Due to high pollution load and colour contributing substances, pulp and paper mill effluents cause serious aquatic and soil pollution. A lignin-degrading bacterial strain capable of decolourising Azure-B dye was identified as lignin peroxidase (LiP) producing strain LD-5. The strain was isolated from pulp and paper mill effluent contaminated site. Biochemical and 16S rDNA gene sequence analysis suggested that strain LD-5 belonged to the Serratia liquefaciens. The strain LD-5 effectively reduced pollution parameters (colour 72%, lignin 58%, COD 85% and phenol 95%) of real effluent after 144h of treatment at 30°C, pH 7.6 and 120rpm. Extracellular LiP produced by S. liquefaciens during effluent decolourisation was purified to homogeneity using ammonium sulfate (AMS) precipitation and DEAE cellulose column chromatography. The molecular weight of the purified lignin peroxidase was estimated to be ∼28kDa. Optimum pH and temperature for purified lignin peroxidase activity were determined as pH 6.0 and 40°C, respectively. Detoxified effluent was evaluated for residual toxicity by alkaline single cell (comet) gel electrophoresis (SCGE) assay using Saccharomyces cerevisiae MTCC 36 as model organism. The toxicity reduction to treated effluent was 49.4%. These findings suggest significant potential of S. liquefaciens for bioremediation of pulp and paper mill effluent.


Assuntos
Peroxidases/metabolismo , Serratia liquefaciens/metabolismo , Eliminação de Resíduos Líquidos/métodos , Poluentes Químicos da Água/metabolismo , Corantes Azur/metabolismo , Corantes Azur/toxicidade , Biodegradação Ambiental , Corantes/química , Corantes/toxicidade , Ensaio Cometa , DNA Bacteriano/genética , DNA Ribossômico/genética , Resíduos Industriais , Papel , Serratia liquefaciens/enzimologia , Serratia liquefaciens/genética , Serratia liquefaciens/isolamento & purificação , Poluentes Químicos da Água/toxicidade
20.
J Food Sci ; 80(8): M1842-9, 2015 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-26189559

RESUMO

The storage of fresh raw milk at low temperature does not prevent proliferation of psychrotrophic bacteria that can produce heat-resistant proteolytic enzymes contributing to the reduced shelf life of dairy products. This study aimed to identify the dominant psychrotrophic proteolytic enzyme-producing population of raw milk from Brazil. Raw milk samples collected in 3 different cooling tanks in Brazil were stored at optimal (45 h at 4 °C followed by 3 h at 7 °C) and suboptimal (45 h at 7 °C followed by 3 h at 10 °C) conditions to simulate farm storage and transportation allowed by Brazilian laws. The highly proteolytic enzyme-producing strains isolated from stored cold raw milk were characterized by repetitive sequence-based Polymerase Chain Reaction (PCR) analysis. This clustering resulted in 8 different clusters and 4 solitary fingerprints. The most proteolytic isolates from each rep-cluster were selected for identification using miniaturized kit, 16S rDNA and rpoB gene sequencing. Serratia liquefaciens (73.9%) and Pseudomonas spp. (26.1%) were identified as the dominant psychrotrophic microorganisms with high spoilage potential. The knowledge of milk spoilage microbiota will contribute to improved quality of milk and dairy products.


Assuntos
Contaminação de Alimentos , Leite/microbiologia , Pseudomonas/isolamento & purificação , Serratia liquefaciens/isolamento & purificação , Animais , Proteínas de Bactérias/genética , Brasil , Temperatura Baixa , Contagem de Colônia Microbiana , Microbiologia de Alimentos , Qualidade dos Alimentos , Peptídeo Hidrolases/metabolismo , RNA Ribossômico 16S/genética
SELEÇÃO DE REFERÊNCIAS
DETALHE DA PESQUISA