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1.
Angew Chem Int Ed Engl ; 63(31): e202407070, 2024 07 29.
Artigo em Inglês | MEDLINE | ID: mdl-38712793

RESUMO

Oxetane synthase (TmCYP1), a novel cytochrome P450 enzyme from Taxus×media cell cultures, has been functionally characterized to efficiently catalyse the formation of the oxetane ring in tetracyclic taxoids. Transient expression of TmCYP1 in Nicotiana benthamiana using 2α,5α,7ß,9α,10ß,13α-hexaacetoxytaxa-4(20),11(12)-diene (1) as a substrate led to the production of a major oxetane derivative, 1ß-dehydroxybaccatin IV (1 a), and a minor 4ß,20-epoxide derivative, baccatin I (1 b). However, feeding the substrate decinnamoyltaxinine J (2), a 5-deacetylated derivative of 1, yielded only 5α-deacetylbaccatin I (2 b), a 4ß,20-epoxide. A possible reaction mechanism was proposed on the basis of substrate-feeding, 2H and 18O isotope labelling experiments, and density functional theory calculations. This reaction could be an intramolecular oxidation-acetoxyl rearrangement and the construction of the oxetane ring may occur through a concerted process; however, the 4ß,20-epoxide might be a shunt product. In this process, the C5-O-acetyl group in substrate is crucial for the oxetane ring formation but not for the 4(20)-epoxy ring formation by TmCYP1. These findings provide a better understanding of the enzymatic formation of the oxetane ring in paclitaxel biosynthesis.


Assuntos
Sistema Enzimático do Citocromo P-450 , Éteres Cíclicos , Paclitaxel , Sistema Enzimático do Citocromo P-450/metabolismo , Paclitaxel/biossíntese , Paclitaxel/química , Paclitaxel/metabolismo , Éteres Cíclicos/química , Éteres Cíclicos/metabolismo , Taxus/enzimologia , Taxus/metabolismo , Biocatálise , Nicotiana/metabolismo , Nicotiana/enzimologia , Estrutura Molecular
3.
Science ; 383(6683): 622-629, 2024 Feb 09.
Artigo em Inglês | MEDLINE | ID: mdl-38271490

RESUMO

Paclitaxel is a well known anticancer compound. Its biosynthesis involves the formation of a highly functionalized diterpenoid core skeleton (baccatin III) and the subsequent assembly of a phenylisoserinoyl side chain. Despite intensive investigation for half a century, the complete biosynthetic pathway of baccatin III remains unknown. In this work, we identified a bifunctional cytochrome P450 enzyme [taxane oxetanase 1 (TOT1)] in Taxus mairei that catalyzes an oxidative rearrangement in paclitaxel oxetane formation, which represents a previously unknown enzyme mechanism for oxetane ring formation. We created a screening strategy based on the taxusin biosynthesis pathway and uncovered the enzyme responsible for the taxane oxidation of the C9 position (T9αH1). Finally, we artificially reconstituted a biosynthetic pathway for the production of baccatin III in tobacco.


Assuntos
Alcaloides , Sistema Enzimático do Citocromo P-450 , Engenharia Metabólica , Paclitaxel , Proteínas de Plantas , Taxoides , Taxus , Alcaloides/biossíntese , Alcaloides/genética , Hidrocarbonetos Aromáticos com Pontes/química , Hidrocarbonetos Aromáticos com Pontes/metabolismo , Éteres Cíclicos/química , Éteres Cíclicos/metabolismo , Paclitaxel/biossíntese , Taxoides/metabolismo , Taxus/enzimologia , Taxus/genética , Sistema Enzimático do Citocromo P-450/química , Sistema Enzimático do Citocromo P-450/genética , Proteínas de Plantas/química , Proteínas de Plantas/genética
4.
Molecules ; 26(10)2021 May 12.
Artigo em Inglês | MEDLINE | ID: mdl-34065782

RESUMO

Taxol is one of the most effective anticancer drugs in the world that is widely used in the treatments of breast, lung and ovarian cancer. The elucidation of the taxol biosynthetic pathway is the key to solve the problem of taxol supply. So far, the taxol biosynthetic pathway has been reported to require an estimated 20 steps of enzymatic reactions, and sixteen enzymes involved in the taxol pathway have been well characterized, including a novel taxane-10ß-hydroxylase (T10ßOH) and a newly putative ß-phenylalanyl-CoA ligase (PCL). Moreover, the source and formation of the taxane core and the details of the downstream synthetic pathway have been basically depicted, while the modification of the core taxane skeleton has not been fully reported, mainly concerning the developments from diol intermediates to 2-debenzoyltaxane. The acylation reaction mediated by specialized Taxus BAHD family acyltransferases (ACTs) is recognized as one of the most important steps in the modification of core taxane skeleton that contribute to the increase of taxol yield. Recently, the influence of acylation on the functional and structural diversity of taxanes has also been continuously revealed. This review summarizes the latest research advances of the taxol biosynthetic pathway and systematically discusses the acylation reactions supported by Taxus ACTs. The underlying mechanism could improve the understanding of taxol biosynthesis, and provide a theoretical basis for the mass production of taxol.


Assuntos
Aciltransferases/metabolismo , Antineoplásicos/metabolismo , Paclitaxel/biossíntese , Extratos Vegetais/biossíntese , Taxus/química , Taxus/enzimologia , Acilação , Aciltransferases/genética , Sequência de Aminoácidos , Vias Biossintéticas , Hidrocarbonetos Aromáticos com Pontes/metabolismo , Ligases/metabolismo , Oxigenases de Função Mista/metabolismo , Taxoides/metabolismo , Taxus/classificação , Taxus/genética , Transcriptoma
5.
J Biol Chem ; 295(15): 4963-4973, 2020 04 10.
Artigo em Inglês | MEDLINE | ID: mdl-32086380

RESUMO

Taxol (paclitaxel) is a very widely used anticancer drug, but its commercial sources mainly consist of stripped bark or suspension cultures of members of the plant genus Taxus. Taxol accumulates as part of a complex mixture of chemical analogs, termed taxoids, which complicates its production in pure form, highlighting the need for metabolic engineering approaches for high-level Taxol production in cell cultures or microbial hosts. Here, we report on the characterization of acyl-activating enzymes (AAEs) that catalyze the formation of CoA esters of different organic acids relevant for the N-substitution of the 3-phenylisoserine side chain of taxoids. On the basis of similarities to AAE genes of known function from other organisms, we identified candidate genes in publicly available transcriptome data sets obtained with Taxus × media. We cloned 17 AAE genes, expressed them heterologously in Escherichia coli, purified the corresponding recombinant enzymes, and performed in vitro assays with 27 organic acids as potential substrates. We identified TmAAE1 and TmAAE5 as the most efficient enzymes for the activation of butyric acid (Taxol D side chain), TmAAE13 as the best candidate for generating a CoA ester of tiglic acid (Taxol B side chain), TmAAE3 and TmAAE13 as suitable for the activation of 4-methylbutyric acid (N-debenzoyl-N-(2-methylbutyryl)taxol side chain), TmAAE15 as a highly efficient candidate for hexanoic acid activation (Taxol C side chain), and TmAAE4 as suitable candidate for esterification of benzoic acid with CoA (Taxol side chain). This study lays important groundwork for metabolic engineering efforts aimed at improving Taxol production in cell cultures.


Assuntos
Acil Coenzima A/metabolismo , Coenzima A Ligases/metabolismo , Ésteres/metabolismo , Paclitaxel/química , Paclitaxel/metabolismo , Proteínas Recombinantes/metabolismo , Taxus/enzimologia , Sequência de Aminoácidos , Clonagem Molecular , Coenzima A Ligases/química , Coenzima A Ligases/genética , Escherichia coli/genética , Escherichia coli/crescimento & desenvolvimento , Escherichia coli/metabolismo , Proteínas Recombinantes/genética , Homologia de Sequência
6.
Daru ; 26(2): 129-142, 2018 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-30377988

RESUMO

BACKGROUND: Paclitaxel is a potent antitumor alkaloid widely used for the treatment of several cancer types. This valuable secondary metabolite naturally exists in the inner bark of Taxus species in very low amounts. The small-scale production of paclitaxel in Taxus cell cultures requires utilization of several elicitors. OBJECTIVE: The main objective of this work was to identify key genes that encode rate-limiting enzymes in paclitaxel biosynthesis pathway by investigating the possible relationship between paclitaxel production and a set of 13 involved genes' relative expression in Taxus baccata L. cell suspension cultures affected by coronatine and methyl-ß-cyclodextrin. METHODS: In the present research, the most important key genes were identified using gene expression profiling evaluation and paclitaxel production assessment in Taxus baccata L. cell cultures affected by mentioned elicitors. RESULTS AND CONCLUSION: Gene expression levels were variably increased using methyl-ß-cyclodextrin, and in some cases, a synergistic effect on transcript accumulation was observed when culture medium was supplemented with both elicitors. It was revealed that DBAT, BAPT, and DBTNBT are the most important rate-limiting enzymes in paclitaxel biosynthesis pathway in Taxus baccata L. cell suspension cultures under coronatine and methyl-ß-cyclodextrin elicitation condition. Moreover, PAM was identified as one of the important key genes especially in the absence of ß-phenylalanine. In cell cultures affected by these elicitors, paclitaxel was found largely in the culture media (more than 90%). The secretion of this secondary metabolite suggests a limited feedback inhibition and reduced paclitaxel toxicity for producer cells. It is the result of the ABC gene relative expression level increment under methyl-ß-cyclodextrin elicitation and highly depends on methyl-ß-cyclodextrin's special property (complex formation with hydrophobic compounds). Paclitaxel biosynthesis was obviously increased due to the effect of coronatine and methyl-ß-cyclodextrin elicitation, leading to the production level of 5.62 times higher than that of the untreated cultures. Graphical abstract Rate Limiting Enzymes in Paclitaxel Biosynthesis Pathway: DBAT, BAPT, DBTNBT and PAM.


Assuntos
Aminoácidos/farmacologia , Técnicas de Cultura de Células/métodos , Indenos/farmacologia , Paclitaxel/biossíntese , Proteínas de Plantas/genética , Taxus/citologia , beta-Ciclodextrinas/farmacologia , Células Cultivadas , Perfilação da Expressão Gênica , Regulação Enzimológica da Expressão Gênica/efeitos dos fármacos , Regulação da Expressão Gênica de Plantas/efeitos dos fármacos , Redes e Vias Metabólicas , Reação em Cadeia da Polimerase em Tempo Real , Taxus/enzimologia , Taxus/metabolismo
7.
Plant Physiol Biochem ; 132: 271-280, 2018 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-30240989

RESUMO

The combined use of elicitors can be an effective way to increase the production of secondary metabolites (SMs) in plant cell, tissue and organ cultures. This study investigated the effects of a salicylic acid (SA) pretreatment and different glucose levels on the growth, biochemical traits and taxane production in a Taxus baccata callus culture. For this purpose, after a pretreatment with SA (5 µM), three-month-old calli were cultured on B5 medium fortified with different concentrations of glucose (0, 0.5, 1, 2 and 3%), and they were compared with calli cultured on a B5 medium supplemented only with glucose. When the calli were harvested at 21 days, their fresh weight (g), dry weight (g) and cell viability (%) had decreased significantly (p < 0.05) with the higher glucose concentrations. The glucose treatment increased the hydrogen peroxide (H2O2) and malondialdehyde (MDA) content, and caused oxidative stress in treated tissues. The lower H2O2 content and oxidative stress was associated with an increased antioxidant enzyme activity in the SA-pretreated samples, which resulted in less membrane damage and improved growth and cell viability under the glucose treatment compared to the control. By reducing the activity of phenylalanine ammonia-lyase (PAL) and polyphenol oxidase (PPO), the SA pretreatment reduced the production and oxidation of phenolic compounds under the glucose treatment; this decrease was associated with less browning of tissues and higher viability. Increases in taxol (5.1-fold) and total taxanes (3.5-fold) in the SA-pretreated calli cultured on the medium containing 2% glucose, compared to the control, indicated that the two treatments had a significant effect on taxane production in the T. baccata callus culture.


Assuntos
Hidrocarbonetos Aromáticos com Pontes/metabolismo , Glucose/farmacologia , Ácido Salicílico/farmacologia , Taxoides/metabolismo , Taxus/metabolismo , Técnicas de Cultura de Tecidos/métodos , Antioxidantes/metabolismo , Biomassa , Catecol Oxidase/metabolismo , Flavonoides/metabolismo , Peróxido de Hidrogênio/metabolismo , Malondialdeído/metabolismo , Fenóis/metabolismo , Fenilalanina Amônia-Liase/metabolismo , Taxus/anatomia & histologia , Taxus/enzimologia , Taxus/crescimento & desenvolvimento
8.
Biotechnol Lett ; 40(8): 1245-1251, 2018 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-29869304

RESUMO

OBJECTIVES: Taxoid 10ß-O-acetyl transferase (DBAT) was redesigned to enhance its catalytic activity and substrate preference for baccatin III and taxol biosynthesis. RESULTS: Residues H162, D166 and R363 were determined as potential sites within the catalytic pocket of DBAT for molecular docking and site-directed mutagenesis to modify the activity of DBAT. Enzymatic activity assays revealed that the kcat/KM values of mutant H162A/R363H, D166H, R363H, D166H/R363H acting on 10-deacetylbaccatin III were about 3, 15, 26 and 60 times higher than that of the wild type of DBAT, respectively. Substrate preference assays indicated that these mutants (H162A/R363H, D166H, R363H, D166H/R363H) could transfer acetyl group from unnatural acetyl donor (e.g. vinyl acetate, sec-butyl acetate, isobutyl acetate, amyl acetate and isoamyl acetate) to 10-deacetylbaccatin III. CONCLUSION: Taxoid 10ß-O-acetyl transferase mutants with redesigned active sites displayed increased catalytic activities and modified substrate preferences, indicating their possible application in the enzymatic synthesis of baccatin III and taxol.


Assuntos
Acetilesterase/metabolismo , Histidina , Mutagênese Sítio-Dirigida/métodos , Proteínas Recombinantes/metabolismo , Taxoides/metabolismo , Acetilesterase/genética , Escherichia coli/genética , Histidina/genética , Histidina/metabolismo , Concentração de Íons de Hidrogênio , Simulação de Acoplamento Molecular , Proteínas de Plantas/genética , Proteínas de Plantas/metabolismo , Proteínas Recombinantes/genética , Especificidade por Substrato , Taxus/enzimologia , Taxus/genética
9.
Appl Biochem Biotechnol ; 186(4): 949-959, 2018 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-29797298

RESUMO

Taxoid 10ß-O-acetyl transferase (DBAT) is a key enzyme in the biosynthesis of the famous anticancer drug paclitaxel, which catalyses the formation of baccatin III from 10-deacetylbaccatin III (10-DAB). However, the activity essential residues of the enzyme are still unknown, and the acylation mechanism from its natural substrate 10-deacetylbaccatin III and acetyl CoA to baccatin III remains unclear. In this study, the homology modelling, molecular docking, site-directed mutagenesis, and kinetic parameter determination of the enzyme were carried out. The results showed that the enzyme mutant DBATH162A resulted in complete loss of enzymatic activity, suggesting that the residue histidine at 162 was essential to DBAT activity. Residues D166 and R363 which were located in the pocket of the enzyme by homology modelling and molecular docking were also important for DBAT activity through the site-directed mutations. Furthermore, four amino acid residues including S31 and D34 from motif SXXD, D372 and G376 from motif DFGWG also played important roles on acylation. This was the first report of the elucidation of the activity essential residues of DBAT, making it possible for the further structural-based re-design of the enzyme for efficient biotransformation of baccatin III and paclitaxel.


Assuntos
Acetilcoenzima A/química , Aldeído-Cetona Transferases/química , Alcaloides/síntese química , Simulação de Acoplamento Molecular , Proteínas de Plantas/química , Taxoides/síntese química , Taxus/enzimologia , Aldeído-Cetona Transferases/genética , Alcaloides/química , Substituição de Aminoácidos , Mutação de Sentido Incorreto , Paclitaxel/síntese química , Paclitaxel/química , Proteínas de Plantas/genética , Taxoides/química , Taxus/genética
10.
Mol Biotechnol ; 60(7): 492-505, 2018 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-29796788

RESUMO

Natural production of anti-cancer drug taxol from Taxus has proved to be environmentally unsustainable and economically unfeasible. Currently, bioengineering the biosynthetic pathway of taxol is an attractive alternative production approach. 10-deacetylbaccatin III-10-O-acetyl transferase (DBAT) was previously characterized as an acyltransferase, using 10-deacetylbaccatin III (10-DAB) and acetyl CoA as natural substrates, to form baccatin III in the taxol biosynthesis. Here, we report that other than the natural acetyl CoA (Ac-CoA) substrate, DBAT can also utilize vinyl acetate (VA), which is commercially available at very low cost, acylate quickly and irreversibly, as acetyl donor in the acyl transfer reaction to produce baccatin III. Furthermore, mutants were prepared via a semi-rational design in this work. A double mutant, I43S/D390R was constructed to combine the positive effects of the different single mutations on catalytic activity, and its catalytic efficiency towards 10-DAB and VA was successfully improved by 3.30-fold, compared to that of wild-type DBAT, while 2.99-fold higher than the catalytic efficiency of WT DBAT towards 10-DAB and Ac-CoA. These findings can provide a promising economically and environmentally friendly method for exploring novel acyl donors to engineer natural product pathways.


Assuntos
Acetiltransferases/genética , Alcaloides/biossíntese , Antineoplásicos Fitogênicos/biossíntese , Taxus/enzimologia , Acetiltransferases/química , Acetiltransferases/metabolismo , Alcaloides/economia , Antineoplásicos Fitogênicos/economia , Bioengenharia , Vias Biossintéticas , Biologia Computacional , Análise Custo-Benefício , Engenharia Genética , Modelos Moleculares , Mutagênese , Paclitaxel/biossíntese , Paclitaxel/economia , Especificidade por Substrato , Taxoides/economia , Taxoides/metabolismo , Taxus/química , Taxus/genética , Taxus/metabolismo , Compostos de Vinila/química , Compostos de Vinila/metabolismo
11.
Enzyme Microb Technol ; 114: 22-28, 2018 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-29685349

RESUMO

Phenylalanine aminomutase (TcPAM) from Taxus chinensis catalyzes the regioselective hydroamination of trans-cinnamic acid (t-CA) to yield ß-phe. However, the final product mixture consists of both α- and ß-phe owing to low regioselectivity, which is still a challenge to synthesize highly pure ß-phe. Therefore, a modified TcPAM with high ß-selectivity is expected. Based on the catalytic mechanism and structure, two amino acid residues (Asn458 and Leu108) in active sites were identified as the key residues for controlling the regioselective hydroamination of t-CA and as promising candidates for mutagenesis to enhance ß-selectivity and decrease α-selectivity. The Asn458 and Leu108 residues were mutated to yield variant TcPAM-Asn458Phe/Leu108Glu, and the ß-selectivity was approximately 5.2-fold higher than that of wild-type TcPAM, while α-selectivity decreased to 68%, and the percentage of ß-phe in the product mixture increased from 42% to 83%. In addition, the mutant was applied to synthesize ß-arylalanines using substituent t-CA as a substrate. The regioselectivity was also affected by the substituent groups at the phenyl ring of t-CA with respect to their electronic properties and position, and the 4-methoxy and methyl substituent t-CA were transferred into ß-arylalanines. The conversion rate also exceeded 90%. In summary, the engineered TcPAM proved to be useful for one-step asymmetric amination of t-CA and its derivatives to synthesize highly pure ß-arylalanines.


Assuntos
Fenilalanina Amônia-Liase/química , Fenilalanina Amônia-Liase/genética , Fenilalanina/química , Proteínas de Plantas/química , Proteínas de Plantas/genética , Taxus/enzimologia , Biocatálise , Domínio Catalítico , Cinamatos/química , Mutação , Fenilalanina Amônia-Liase/metabolismo , Proteínas de Plantas/metabolismo , Estereoisomerismo , Especificidade por Substrato , Taxus/genética
12.
Biotechnol Appl Biochem ; 65(3): 294-305, 2018 May.
Artigo em Inglês | MEDLINE | ID: mdl-28876471

RESUMO

CYP725A4 is a P450 enzyme from Taxus cuspidata that catalyzes the formation of taxadiene-5α-ol (T5α-ol) from taxadiene in paclitaxel biosynthesis. Past attempts expressing CYP725A4 in heterologous hosts reported the formation of 5(12)-oxa-3(11)-cyclotaxane (OCT) and/or 5(11)-oxa-3(11)-cyclotaxane (iso-OCT) instead of, or in addition to, T5α-ol. Here, we report that T5α-ol is produced as a minor product by Escherichia coli expressing both taxadiene synthase and CYP725A4. The major products were OCT and iso-OCT, while trace amounts of unidentified monooxygenated taxanes were also detected by gas chromatography-mass spectrometry. Since OCT and iso-OCT had not been found in nature, we tested the hypothesis that protein-protein interaction of CYP725A4 with redox partners, such as cytochrome P450 reductase (CPR) and cytochrome b5, may affect the products formed by CYP725A4, possibly favoring the formation of T5α-ol over OCT and iso-OCT. Our results show that coexpression of CYP725A4 with CPR from different organisms did not change the relative ratios of OCT, iso-OCT, and T5α-ol, while cytochrome b5 decreased overall levels of the products formed. Although unsuccessful in finding conditions that promote T5α-ol formation over other products, we used our results to clarify conflicting claims in the literature and discuss other possible approaches to produce paclitaxel via metabolic and enzyme engineering.


Assuntos
Alcenos/metabolismo , Sistema Enzimático do Citocromo P-450/metabolismo , Diterpenos/metabolismo , Escherichia coli/metabolismo , Taxus/enzimologia , Alcenos/química , Sistema Enzimático do Citocromo P-450/genética , Diterpenos/química , Taxus/genética
13.
Appl Microbiol Biotechnol ; 101(20): 7523-7533, 2017 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-28918530

RESUMO

Taxol is an anticancer identified in both endophytic fungus and its host plant. Plant Taxol is a diterpenoid with geranylgeranyl diphosphate (GGPP) mediates the biosynthesis of its terpenoid moiety. Previous report has suggested that fungal Taxol may require terpenoid pathway for its biosynthesis. Here in this study, feeding a Taxol-producing endophytic fungus (Paraconiothyrium SSM001) with terpenoid precursors including isopentenyl pyrophosphate (IPP, isoprene) and GGPP enhanced Taxol production threefold and fivefold, respectively, compared to the control. Thus, we assumed that increasing the terpenoid pool size in particular GGPP by introducing a new copy number of GGPPS particularly from a Taxol-producing plant might increase the production level of fungal Taxol. Agrobacterium-mediated integration of Taxus canadensis geranylgeranyl diphosphate synthase (GGPPS) gene into the Paraconiothyrium SSM001 genome was successful and increased the terpenoid pool size indicated by an increase in carotenoid level and orange to red coloration of some GGPPS-transformed SSM001 colonies. Furthermore, the integration improved the level of Taxol production threefold. Feeding a GGPPS-transformed SSM001 fungus with a GGPP precursor increased the expression level of GGPPS transcript and Taxol production. The successful increase in both terpenoid and Taxol production levels due to GGPPS gene integration into the fungal genome might be a step forward in manipulating Taxol-producing endophytic fungi. Future control of the transformation time and the manipulation of the phenolic pathway could maximize the production level.


Assuntos
Antineoplásicos/metabolismo , Ascomicetos/metabolismo , Farnesiltranstransferase/metabolismo , Engenharia Metabólica , Paclitaxel/metabolismo , Fosfatos de Poli-Isoprenil/metabolismo , Ascomicetos/genética , Butadienos/metabolismo , Farnesiltranstransferase/genética , Hemiterpenos/metabolismo , Pentanos/metabolismo , Proteínas de Plantas/genética , Proteínas de Plantas/metabolismo , Proteínas Recombinantes/genética , Proteínas Recombinantes/metabolismo , Taxus/enzimologia , Taxus/genética
14.
Plant Mol Biol ; 95(1-2): 169-180, 2017 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-28795267

RESUMO

KEY MESSAGE: Conifers contain P450 enzymes from the CYP79 family that are involved in cyanogenic glycoside biosynthesis. Cyanogenic glycosides are secondary plant compounds that are widespread in the plant kingdom. Their biosynthesis starts with the conversion of aromatic or aliphatic amino acids into their respective aldoximes, catalysed by N-hydroxylating cytochrome P450 monooxygenases (CYP) of the CYP79 family. While CYP79s are well known in angiosperms, their occurrence in gymnosperms and other plant divisions containing cyanogenic glycoside-producing plants has not been reported so far. We screened the transcriptomes of 72 conifer species to identify putative CYP79 genes in this plant division. From the seven resulting full-length genes, CYP79A118 from European yew (Taxus baccata) was chosen for further characterization. Recombinant CYP79A118 produced in yeast was able to convert L-tyrosine, L-tryptophan, and L-phenylalanine into p-hydroxyphenylacetaldoxime, indole-3-acetaldoxime, and phenylacetaldoxime, respectively. However, the kinetic parameters of the enzyme and transient expression of CYP79A118 in Nicotiana benthamiana indicate that L-tyrosine is the preferred substrate in vivo. Consistent with these findings, taxiphyllin, which is derived from L-tyrosine, was the only cyanogenic glycoside found in the different organs of T. baccata. Taxiphyllin showed highest accumulation in leaves and twigs, moderate accumulation in roots, and only trace accumulation in seeds and the aril. Quantitative real-time PCR revealed that CYP79A118 was expressed in plant organs rich in taxiphyllin. Our data show that CYP79s represent an ancient family of plant P450s that evolved prior to the separation of gymnosperms and angiosperms. CYP79A118 from T. baccata has typical CYP79 properties and its substrate specificity and spatial gene expression pattern suggest that the enzyme contributes to the formation of taxiphyllin in this plant species.


Assuntos
Sistema Enzimático do Citocromo P-450/metabolismo , Nitrilas/metabolismo , Taxus/enzimologia , Sequência de Aminoácidos , Sistema Enzimático do Citocromo P-450/química , Sistema Enzimático do Citocromo P-450/genética , Regulação da Expressão Gênica de Plantas/efeitos dos fármacos , Nitrilas/química , Especificidade de Órgãos/genética , Proteínas de Plantas/química , Proteínas de Plantas/genética , Proteínas de Plantas/metabolismo , RNA Mensageiro/genética , RNA Mensageiro/metabolismo , Alinhamento de Sequência , Taxus/genética , Transcriptoma/genética
15.
Nat Commun ; 8: 15544, 2017 05 18.
Artigo em Inglês | MEDLINE | ID: mdl-28516951

RESUMO

The natural concentration of the anticancer drug Taxol is about 0.02% in yew trees, whereas that of its analogue 7-ß-xylosyl-10-deacetyltaxol is up to 0.5%. While this compound is not an intermediate in Taxol biosynthetic route, it can be converted into Taxol by de-glycosylation and acetylation. Here, we improve the catalytic efficiency of 10-deacetylbaccatin III-10-O-acetyltransferase (DBAT) of Taxus towards 10-deacetyltaxol, a de-glycosylated derivative of 7-ß-xylosyl-10-deacetyltaxol to generate Taxol using mutagenesis. We generate a three-dimensional structure of DBAT and identify its active site using alanine scanning and design a double DBAT mutant (DBATG38R/F301V) with a catalytic efficiency approximately six times higher than that of the wild-type. We combine this mutant with a ß-xylosidase to obtain an in vitro one-pot conversion of 7-ß-xylosyl-10-deacetyltaxol to Taxol yielding 0.64 mg ml-1 Taxol in 50 ml at 15 h. This approach represents a promising environmentally friendly alternative for Taxol production from an abundant analogue.


Assuntos
Paclitaxel/biossíntese , Paclitaxel/química , Taxoides/química , Taxoides/metabolismo , Taxus/enzimologia , Acetiltransferases/metabolismo , Alanina/química , Antineoplásicos/química , Catálise , Domínio Catalítico , Glicosilação , Concentração de Íons de Hidrogênio , Espectroscopia de Ressonância Magnética , Simulação de Acoplamento Molecular , Mutagênese , Mutação , Extratos Vegetais , Proteínas Recombinantes/metabolismo , Taxus/química , Temperatura
16.
Biochemistry ; 56(14): 2010-2023, 2017 04 11.
Artigo em Inglês | MEDLINE | ID: mdl-28362483

RESUMO

Terpenoid synthases catalyze isoprenoid cyclization reactions underlying the generation of more than 80,000 natural products. Such dramatic chemodiversity belies the fact that these enzymes generally consist of only three domain folds designated as α, ß, and γ. Catalysis by class I terpenoid synthases occurs exclusively in the α domain, which is found with α, αα, αß, and αßγ domain architectures. Here, we explore the influence of domain architecture on catalysis by taxadiene synthase from Taxus brevifolia (TbTS, αßγ), fusicoccadiene synthase from Phomopsis amygdali (PaFS, (αα)6), and ophiobolin F synthase from Aspergillus clavatus (AcOS, αα). We show that the cyclization fidelity and catalytic efficiency of the α domain of TbTS are severely compromised by deletion of the ßγ domains; however, retention of the ß domain preserves significant cyclization fidelity. In PaFS, we previously demonstrated that one α domain similarly influences catalysis by the other α domain [ Chen , M. , Chou , W. K. W. , Toyomasu , T. , Cane , D. E. , and Christianson , D. W. ( 2016 ) ACS Chem. Biol. 11 , 889 - 899 ]. Here, we show that the hexameric quaternary structure of PaFS enables cluster channeling. We also show that the α domains of PaFS and AcOS can be swapped so as to make functional chimeric αα synthases. Notably, both cyclization fidelity and catalytic efficiency are altered in all chimeric synthases. Twelve newly formed and uncharacterized C20 diterpene products and three C25 sesterterpene products are generated by these chimeras. Thus, engineered αßγ and αα terpenoid cyclases promise to generate chemodiversity in the greater family of terpenoid natural products.


Assuntos
Alquil e Aril Transferases/química , Aspergillus/genética , Isomerases/química , Proteínas Mutantes Quiméricas/química , Saccharomycetales/genética , Taxus/genética , Alquil e Aril Transferases/genética , Alquil e Aril Transferases/metabolismo , Aspergillus/enzimologia , Ciclização , Diterpenos/metabolismo , Expressão Gênica , Isomerases/genética , Isomerases/metabolismo , Cinética , Modelos Moleculares , Proteínas Mutantes Quiméricas/genética , Proteínas Mutantes Quiméricas/metabolismo , Domínios Proteicos , Engenharia de Proteínas , Estrutura Secundária de Proteína , Saccharomycetales/enzimologia , Sesterterpenos/biossíntese , Taxus/enzimologia
17.
Biochemistry ; 56(10): 1415-1425, 2017 03 14.
Artigo em Inglês | MEDLINE | ID: mdl-28230972

RESUMO

Structure-activity relationship studies show that the phenylisoserinyl moiety of paclitaxel (Taxol) is largely necessary for the effective anticancer activity. Several paclitaxel analogues with a variant isoserinyl side chain have improved pharmaceutical properties versus those of the parent drug. To produce the isoserinyl CoAs as intermediates needed for enzyme catalysis on a semibiosynthetic pathway to paclitaxel analogues, we repurposed the adenylation and thiolation domains (Phe-AT) of a nonribosomal peptide synthetase (TycA) so that they would function as a CoA ligase. Twenty-eight isoserine analogue racemates were synthesized by an established procedure based on the Staudinger [2+2] cycloaddition reaction. Phe-AT converted 16 substituted phenylisoserines, one ß-(heteroaryl)isoserine, and one ß-(cyclohexyl)isoserine to their corresponding isoserinyl CoAs. We imagine that these CoA thioesters can likely serve as linchpin biosynthetic acyl donors transferred by a 13-O-acyltransferase to a paclitaxel precursor baccatin III to make drug analogues with better efficacy. It was also interesting to find that an active site mutant [Phe-AT (W227S)] turned over 2-pyridylisoserine and the sterically demanding p-methoxyphenylisoserine substrates to their CoA thioesters, while Phe-AT did not. This mutant is promising for further development to make 3-fluoro-2-pyridylisoserinyl CoA, a biosynthetic precursor of the oral pharmaceutical tesetaxel used for gastric cancers.


Assuntos
Antineoplásicos Fitogênicos/biossíntese , Coenzima A/química , Escherichia coli/genética , Peptídeo Sintases/química , Proteínas de Plantas/química , Engenharia de Proteínas , Alcaloides/biossíntese , Alcaloides/síntese química , Antineoplásicos Fitogênicos/síntese química , Brevibacillus/química , Brevibacillus/enzimologia , Domínio Catalítico , Clonagem Molecular , Coenzima A/metabolismo , Escherichia coli/enzimologia , Expressão Gênica , Cinética , Modelos Moleculares , Paclitaxel/biossíntese , Paclitaxel/síntese química , Peptídeo Sintases/genética , Peptídeo Sintases/metabolismo , Proteínas de Plantas/metabolismo , Domínios Proteicos , Estrutura Secundária de Proteína , Proteínas Recombinantes/química , Proteínas Recombinantes/genética , Proteínas Recombinantes/metabolismo , Relação Estrutura-Atividade , Especificidade por Substrato , Taxoides/síntese química , Taxoides/metabolismo , Taxus/química , Taxus/enzimologia
18.
Protein Expr Purif ; 132: 60-67, 2017 04.
Artigo em Inglês | MEDLINE | ID: mdl-28109855

RESUMO

Taxadiene-5α-Hydroxylase (CYP725A4) is a membrane-bound plant cytochrome P450 that catalyzes the oxidation of taxadiene to taxadiene-5α-ol. This oxidation is a key step in the production of the valuable cancer therapeutic and natural plant product, taxol. In this work, we report the bacterial expression and purification of six different constructs of CYP725A4. All six of these constructs are N-terminally modified and three of them are fused to cytochrome P450 reductase to form a chimera construct. The construct with the highest yield of CYP725A4 protein was then selected for substrate binding and kinetic analysis. Taxadiene binding followed type-1 substrate patterns with an observed KD of 2.1 ± 0.4 µM. CYP725A4 was further incorporated into nanoscale lipid bilayers (nanodiscs) and taxadiene metabolism was measured. Taxadiene metabolism followed Michaelis-Menten kinetics with an observed Vmax of 30 ± 8 pmol/min/nmolCYP725A4 and a KM of 123 ± 52 µM. Additionally, molecular operating environment (MOE) modeling was performed in order to gain insight into the interactions of taxadiene with CYP725A4 active site. Taken together, we demonstrate the successful expression and purification of the functional membrane-bound plant CYP, CYP725A4, in E. coli.


Assuntos
Alcenos/química , Sistema Enzimático do Citocromo P-450 , Diterpenos/química , Escherichia coli/metabolismo , Proteínas de Plantas , Taxus/genética , Sítios de Ligação , Sistema Enzimático do Citocromo P-450/biossíntese , Sistema Enzimático do Citocromo P-450/química , Sistema Enzimático do Citocromo P-450/genética , Sistema Enzimático do Citocromo P-450/isolamento & purificação , Escherichia coli/genética , Cinética , Proteínas de Plantas/biossíntese , Proteínas de Plantas/química , Proteínas de Plantas/genética , Proteínas de Plantas/isolamento & purificação , Proteínas Recombinantes/biossíntese , Proteínas Recombinantes/química , Proteínas Recombinantes/genética , Proteínas Recombinantes/isolamento & purificação , Taxus/enzimologia
19.
ACS Chem Biol ; 11(5): 1445-51, 2016 05 20.
Artigo em Inglês | MEDLINE | ID: mdl-26930136

RESUMO

Natural product metabolic engineering potentially offers sustainable and affordable access to numerous valuable molecules. However, challenges in characterizing and assembling complex biosynthetic pathways have prevented more rapid progress in this field. The anticancer agent Taxol represents an excellent case study. Assembly of a biosynthetic pathway for Taxol has long been stalled at its first functionalization, putatively an oxygenation performed by the cytochrome P450 CYP725A4, due to confounding characterizations. Here, through combined in vivo (Escherichia coli), in vitro (lipid nanodisc), and metabolite stability assays, we verify the presence and likely cause of this enzyme's inherent promiscuity. Thereby, we remove the possibility that promiscuity simply existed as an artifact of previous metabolic engineering approaches. Further, spontaneous rearrangement and the stabilizing effect of a hydrophobic overlay suggest a potential role for nonenzymatic chemistry in Taxol's biosynthesis. Taken together, this work confirms taxadiene-5α-ol as a primary enzymatic product of CYP725A4 and provides direction for future Taxol metabolic and protein engineering efforts.


Assuntos
Alcenos/metabolismo , Antineoplásicos Fitogênicos/metabolismo , Sistema Enzimático do Citocromo P-450/metabolismo , Diterpenos/metabolismo , Escherichia coli/enzimologia , Paclitaxel/metabolismo , Taxus/enzimologia , Alcenos/química , Antineoplásicos Fitogênicos/química , Vias Biossintéticas , Diterpenos/química , Escherichia coli/química , Escherichia coli/metabolismo , Fermentação , Engenharia Metabólica , Modelos Moleculares , Oxirredução , Paclitaxel/química , Especificidade por Substrato , Taxus/química , Taxus/metabolismo
20.
Sheng Wu Gong Cheng Xue Bao ; 32(5): 554-564, 2016 May 25.
Artigo em Chinês | MEDLINE | ID: mdl-29019194

RESUMO

Taxol is a secondary metabolite with prominent anti-tumor activity, but the yield cannot meet the growing clinical demand due to lower content in yew. Now, most enzyme genes involved in taxol biosynthesis have been cloned and identified, so that obtaining this drug by using synthetic biology method has become a hotspot in recent years. However, most hydroxylases involved in taxol biosynthetic pathway have not been explored. Here, we reviewed the progress on the biosynthesis pathway of taxol, especially concerning hydroxylase. The future research areas of taxol biosynthesis through synthetic biology were also discussed to provide basis for the discovery of uncharacterized hydroxylase genes and the mass taxol production by synthetic biology technology.


Assuntos
Oxigenases de Função Mista/metabolismo , Paclitaxel/biossíntese , Taxus/enzimologia , Vias Biossintéticas , Biologia Sintética
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