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1.
Sci Rep ; 14(1): 15624, 2024 Jul 07.
Artigo em Inglês | MEDLINE | ID: mdl-38972910

RESUMO

This study examines the impact of fire incidents on wildlife and habitats in the western oak forests of Iran (Zagros region). These forests are globally recognized for their exceptional biodiversity but are frequently threatened by wildfires. To achieve this, the study uses the space-time scan statistics permutation (STSSP) model to identify areas with a higher frequency of fires. The study also analyzes the effects of fires on the Zagros forests from 2000 to 2021 using remote-sensing MODIS data. Also, to understand the elements at risk of fire, burned areas were assessed based on the richness of vertebrate species, determined by the distribution of 88 vertebrate species. The results show that the annual fire rate in the Zagros forests is 76.2 (fire occurrences per year), calculated using the Poisson distribution. Findings show the highest fire rates are found in the northwest and a part of the south of the Zagros. The northwest of the Zagros also has the largest number of single fires and clusters, indicating a wide spatial distribution of fire in these regions. On the other side, it was unexpectedly found that these regions have the richest number of species and higher habitat value. The results demonstrate a significant correlation between the value of the habitat and the extent of burned areas (p < 0.05). The study also reveals that the greatest impact of fires is on small vertebrates. The overlap of frequent fire spots with the richest regions of Zagros oak forests in terms of vertebrate diversity emphasizes the need for strategic forest risk reduction planning, especially in these priority zones.


Assuntos
Biodiversidade , Conservação dos Recursos Naturais , Ecossistema , Florestas , Quercus , Vertebrados , Incêndios Florestais , Irã (Geográfico) , Animais , Conservação dos Recursos Naturais/métodos , Incêndios/prevenção & controle
2.
Biol Lett ; 20(7): 20240216, 2024 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-39046287

RESUMO

Most described species have not been explicitly included in phylogenetic trees-a problem named the Darwinian shortfall-owing to a lack of molecular and/or morphological data, thus hampering the explicit incorporation of evolution into large-scale biodiversity analyses. We investigate potential drivers of the Darwinian shortfall in tetrapods, a group in which at least one-third of described species still lack phylogenetic data, thus necessitating the imputation of their evolutionary relationships in fully sampled phylogenies. We show that the number of preserved specimens in scientific collections is the main driver of phylogenetic knowledge accumulation, highlighting the major role of biological collections in unveiling novel biodiversity data and the importance of continued sampling efforts to reduce knowledge gaps. Additionally, large-bodied and wide-ranged species, as well as terrestrial and aquatic amphibians and reptiles, are phylogenetically better known. Future efforts should prioritize phylogenetic research on organisms that are narrow-ranged, small-bodied and underrepresented in scientific collections, such as fossorial species. Addressing the Darwinian shortfall will be imperative for advancing our understanding of evolutionary drivers shaping biodiversity patterns and implementing comprehensive conservation strategies.


Assuntos
Biodiversidade , Evolução Biológica , Filogenia , Vertebrados , Animais , Vertebrados/genética , Vertebrados/classificação , Anfíbios/genética , Anfíbios/classificação , Répteis/classificação , Répteis/genética
3.
Parasit Vectors ; 17(1): 311, 2024 Jul 19.
Artigo em Inglês | MEDLINE | ID: mdl-39030625

RESUMO

BACKGROUND: Gastrointestinal helminths are a very widespread group of intestinal parasites that can cause major health issues in their hosts, including severe illness or death. Traditional methods of helminth parasite identification using microscopy are time-consuming and poor in terms of taxonomic resolution, and require skilled observers. DNA metabarcoding has emerged as a powerful alternative for assessing community composition in a variety of sample types over the last few decades. While metabarcoding approaches have been reviewed for use in other research areas, the use of metabarcoding for parasites has only recently become widespread. As such, there is a need to synthesize parasite metabarcoding methodology and highlight the considerations to be taken into account when developing a protocol. METHODS: We reviewed published literature that utilized DNA metabarcoding to identify gastrointestinal helminth parasites in vertebrate hosts. We extracted information from 62 peer-reviewed papers published between 2014 and 2023 and created a stepwise guide to the metabarcoding process. RESULTS: We found that studies in our review varied in technique and methodology, such as the sample type utilized, genetic marker regions targeted and bioinformatic databases used. The main limitations of metabarcoding are that parasite abundance data may not be reliably attained from sequence read numbers, metabarcoding data may not be representative of the species present in the host and the cost and bioinformatic expertise required to utilize this method may be prohibitive to some groups. CONCLUSIONS: Overall, using metabarcoding to assess gastrointestinal parasite communities is preferable to traditional methods, yielding higher taxonomic resolution, higher throughput and increased versatility due to its utility in any geographical location, with a variety of sample types, and with virtually any vertebrate host species. Additionally, metabarcoding has the potential for exciting new discoveries regarding host and parasite evolution.


Assuntos
Código de Barras de DNA Taxonômico , Helmintos , Enteropatias Parasitárias , Vertebrados , Código de Barras de DNA Taxonômico/métodos , Animais , Helmintos/genética , Helmintos/classificação , Helmintos/isolamento & purificação , Vertebrados/parasitologia , Enteropatias Parasitárias/parasitologia , Humanos , Helmintíase/parasitologia , Trato Gastrointestinal/parasitologia , Biologia Computacional/métodos , DNA de Helmintos/genética
4.
Philos Trans R Soc Lond B Biol Sci ; 379(1909): 20230179, 2024 Sep 09.
Artigo em Inglês | MEDLINE | ID: mdl-39034699

RESUMO

Rapid urbanization is a major cause of habitat and biodiversity loss and human-animal conflict. While urbanization is inevitable, we need to develop a good understanding of the urban ecosystem and the urban-adapted species, in order to ensure sustainable cities for our future. Scavengers play a major role in urban ecosystems, and often, urban adaptation involves a shift towards scavenging behaviour in wild animals. We experimented at different sites in the state of West Bengal, India, to identify the scavenging guild within urban habitats, in response to human-provided food. Our study found a total of 17 different vertebrate species across 15 sites, over 498 sessions of observations. We carried out network analysis to understand the dynamics of the system and found that the free-ranging dog and common myna were key species within the scavenging networks. This study revealed the complexity of scavenging networks within human-dominated habitats. This article is part of the theme issue 'Connected interactions: enriching food web research by spatial and social interactions'.


Assuntos
Ecossistema , Animais , Índia , Cadeia Alimentar , Urbanização , Humanos , Biodiversidade , Comportamento Alimentar , Cidades , Vertebrados/fisiologia , Animais Selvagens/fisiologia
5.
Nature ; 631(8021): 577-582, 2024 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-38961286

RESUMO

Current hypotheses of early tetrapod evolution posit close ecological and biogeographic ties to the extensive coal-producing wetlands of the Carboniferous palaeoequator with rapid replacement of archaic tetrapod groups by relatives of modern amniotes and lissamphibians in the late Carboniferous (about 307 million years ago). These hypotheses draw on a tetrapod fossil record that is almost entirely restricted to palaeoequatorial Pangea (Laurussia)1,2. Here we describe a new giant stem tetrapod, Gaiasia jennyae, from high-palaeolatitude (about 55° S) early Permian-aged (about 280 million years ago) deposits in Namibia that challenges this scenario. Gaiasia is represented by several large, semi-articulated skeletons characterized by a weakly ossified skull with a loosely articulated palate dominated by a broad diamond-shaped parasphenoid, a posteriorly projecting occiput, and enlarged, interlocking dentary and coronoid fangs. Phylogenetic analysis resolves Gaiasia within the tetrapod stem group as the sister taxon of the Carboniferous Colosteidae from Euramerica. Gaiasia is larger than all previously described digited stem tetrapods and provides evidence that continental tetrapods were well established in the cold-temperate latitudes of Gondwana during the final phases of the Carboniferous-Permian deglaciation. This points to a more global distribution of continental tetrapods during the Carboniferous-Permian transition and indicates that previous hypotheses of global tetrapod faunal turnover and dispersal at this time2,3 must be reconsidered.


Assuntos
Fósseis , Camada de Gelo , Comportamento Predatório , Vertebrados , Animais , História Antiga , Namíbia , Palato/anatomia & histologia , Filogenia , Crânio/anatomia & histologia , Dente/anatomia & histologia , Vertebrados/anatomia & histologia , Vertebrados/classificação , Áreas Alagadas , Tamanho Corporal
6.
Sci Data ; 11(1): 782, 2024 Jul 16.
Artigo em Inglês | MEDLINE | ID: mdl-39013892

RESUMO

We present a flora and fauna dataset for the Mira-Mataje binational basins. This is an area shared between southwestern Colombia and northwestern Ecuador, where both the Chocó and Tropical Andes biodiversity hotspots converge. We systematized data from 120 sources in the Darwin Core Archive (DwC-A) standard and geospatial vector data format for geographic information systems (GIS) (shapefiles). Sources included natural history museums, published literature, and citizen science repositories across 13 countries. The resulting database has 33,460 records from 6,821 species, of which 540 have been recorded as endemic, and 612 as threatened. The diversity represented in the dataset is equivalent to 10% of the total plant species and 26% of the total terrestrial vertebrate species in both hotspots. The dataset can be used to estimate and compare biodiversity patterns with environmental parameters and provide value to ecosystems, ecoregions, and protected areas. The dataset is a baseline for future assessments of biodiversity in the face of environmental degradation, climate change, and accelerated extinction processes.


Assuntos
Biodiversidade , Plantas , Equador , Animais , Colômbia , Vertebrados , Sistemas de Informação Geográfica , Ecossistema , Mudança Climática , Conservação dos Recursos Naturais , Clima Tropical
7.
PeerJ ; 12: e17596, 2024.
Artigo em Inglês | MEDLINE | ID: mdl-38948236

RESUMO

Plastic pollution is a widespread and growing concern due to its transformation into microplastics (MPs), which can harm organisms and ecosystems. This study, aimed to identify plastic pollution in the feces of terrestrial vertebrates using convenience sampling both inside and outside protected areas in Western Thailand. We hypothesized that MPs are likely to be detectable in the feces of all vertebrate species, primarily in the form of small black fragments. We predicted varying quantities of MPs in the feces of the same species across different protected areas. Furthermore, we expected that factors indicating human presence, landscape characteristics, scat weight, and the MP abundance in water, soils, and sediments would influence the presence of plastics in feces. Among 12 terrestrial species studied, potential MPs were found in 41.11% of 90 samples, totaling 83 pieces across eight species including the Asian elephant (Elephas maximus), Eld's deer (Rucervus eldii), Dhole (Cuon alpinus), Gaur (Bos gaurus), Sambar deer (Rusa unicolor), Wild boar (Sus scrofa), Northern red muntjac (Muntiacus vaginalis), and Butterfly lizard (Leiolepis belliana). Specifically, 3.61% of all potential MPs (three pieces) were macroplastics, and the remaining 96.39% were considered potential MPs with the abundance of 0.92 ± 1.89 items.scat-1 or 8.69 ± 32.56 items.100 g-1 dw. There was an association between the numbers of feces with and without potential plastics and species (χ2 = 20.88, p = 0.012). Most potential plastics were fibers (95.18%), predominantly black (56.63%) or blue (26.51%), with 74.70% smaller than two millimeters. Although there were no significant associations between species and plastic morphologies, colors, and sizes, the abundance classified by these characteristics varied significantly. FTIR identified 52.38% as natural fibers, 38.10% as synthetic fibers (rayon, polyurethane (PUR), polyethylene terephthalate (PET), polypropylene (PP), and PUR blended with cotton), and 9.52% as fragments of PET and Polyvinyl Chloride (PVC). Human-related factors were linked to the occurrence of potential plastics found in the feces of land-dwelling wildlife. This study enhances the understanding of plastic pollution in tropical protected areas, revealing the widespread of MPs even in small numbers from the areas distant from human settlements. Monitoring plastics in feces offers a non-invasive method for assessing plastic pollution in threatened species, as it allows for easy collection and taxonomic identification without harming live animals. However, stringent measures to assure the quality are necessitated to prevent exogenous MP contamination. These findings underscore the importance of raising awareness about plastic pollution in terrestrial ecosystems, especially regarding plastic products from clothing and plastic materials used in agriculture and irrigation systems.


Assuntos
Monitoramento Ambiental , Fezes , Animais , Fezes/química , Tailândia , Monitoramento Ambiental/métodos , Plásticos/efeitos adversos , Microplásticos/análise , Poluição Ambiental/análise , Poluição Ambiental/efeitos adversos , Vertebrados , Poluentes Ambientais/análise , Humanos
8.
Sci Adv ; 10(24): eadi1621, 2024 Jun 14.
Artigo em Inglês | MEDLINE | ID: mdl-38865462

RESUMO

The function of germ cells in somatic growth and aging has been demonstrated in invertebrate models but remains unclear in vertebrates. We demonstrated sex-dependent somatic regulation by germ cells in the short-lived vertebrate model Nothobranchius furzeri. In females, germ cell removal shortened life span, decreased estrogen, and increased insulin-like growth factor 1 (IGF-1) signaling. In contrast, germ cell removal in males improved their health with increased vitamin D signaling. Body size increased in both sexes but was caused by different signaling pathways, i.e., IGF-1 and vitamin D in females and males, respectively. Thus, vertebrate germ cells regulate somatic growth and aging through different pathways of the endocrine system, depending on the sex, which may underlie the sexual difference in reproductive strategies.


Assuntos
Envelhecimento , Células Germinativas , Fator de Crescimento Insulin-Like I , Animais , Células Germinativas/metabolismo , Células Germinativas/citologia , Masculino , Feminino , Envelhecimento/fisiologia , Fator de Crescimento Insulin-Like I/metabolismo , Vertebrados , Transdução de Sinais , Caracteres Sexuais , Tamanho Corporal , Vitamina D/metabolismo , Estrogênios/metabolismo
9.
Ecol Evol Physiol ; 97(3): 157-163, 2024.
Artigo em Inglês | MEDLINE | ID: mdl-38875139

RESUMO

AbstractTwo prominent theories of aging, one based on telomere dynamics and the other on mass-specific energy flux, propose biological time clocks of senescence. The relationship between these two theories, and the biological clocks proposed by each, remains unclear. Here, we examine the relationships between telomere shortening rate, mass-specific metabolic rate, and lifespan among vertebrates (mammals, birds, fishes). Results show that telomere shortening rate increases linearly with mass-specific metabolic rate and decreases nonlinearly with increasing body mass in the same way as mass-specific metabolic rate. Results also show that both telomere shortening rate and mass-specific metabolic rate are similarly related to lifespan and that both strongly predict differences in lifespan, although the slopes of the relationships are less than linear. On average, then, telomeres shorten a fixed amount per unit of mass-specific energy flux. So the mitotic clock of telomere shortening and the energetics-based clock described by metabolic rate can be viewed as alternative measures of the same biological clock. These two processes may be linked, we speculate, through the process of cell division.


Assuntos
Envelhecimento , Relógios Biológicos , Telômero , Animais , Telômero/metabolismo , Envelhecimento/genética , Envelhecimento/fisiologia , Relógios Biológicos/fisiologia , Relógios Biológicos/genética , Encurtamento do Telômero , Longevidade/genética , Longevidade/fisiologia , Metabolismo Energético/fisiologia , Vertebrados/genética , Vertebrados/fisiologia
10.
Int J Mol Sci ; 25(11)2024 Jun 06.
Artigo em Inglês | MEDLINE | ID: mdl-38892461

RESUMO

The Sirtuin (SIRT1-7) family comprises seven evolutionary-conserved enzymes that couple cellular NAD availability with health, nutrition and welfare status in vertebrates. This study re-annotated the sirt3/5 branch in the gilthead sea bream, revealing three paralogues of sirt3 (sirt3.1a/sirt3.1b/sirt3.2) and two of sirt5 (sirt5a/sirt5b) in this Perciform fish. The phylogeny and synteny analyses unveiled that the Sirt3.1/Sirt3.2 dichotomy was retained in teleosts and aquatic-living Sarcopterygian after early vertebrate 2R whole genome duplication (WGD). Additionally, only certain percomorphaceae and gilthead sea bream showed a conserved tandem-duplicated synteny block involving the mammalian-clustered sirt3.1 gene (psmd13-sirt3.1a/b-drd4-cdhr5-ctsd). Conversely, the expansion of the Sirt5 branch was shaped by the teleost-specific 3R WGD. As extensively reviewed in the literature, human-orthologues (sirt3.1/sirt5a) showed a high, conserved expression in skeletal muscle that increased as development advanced. However, recent sirt3.2 and sirt5b suffered an overall muscle transcriptional silencing across life, as well as an enhanced expression on immune-relevant tissues and gills. These findings fill gaps in the ontogeny and differentiation of Sirt genes in the environmentally adaptable gilthead sea bream, becoming a good starting point to advance towards a full understanding of its neo-functionalization. The mechanisms originating from these new paralogs also open new perspectives in the study of cellular energy sensing processes in vertebrates.


Assuntos
Evolução Molecular , Filogenia , Dourada , Sirtuínas , Sintenia , Animais , Dourada/genética , Dourada/metabolismo , Sirtuínas/genética , Sirtuínas/metabolismo , Família Multigênica , Proteínas de Peixes/genética , Proteínas de Peixes/metabolismo , Vertebrados/genética
11.
Curr Top Dev Biol ; 160: 65-86, 2024.
Artigo em Inglês | MEDLINE | ID: mdl-38937031

RESUMO

Morphogenesis is a physical process that sculpts the final functional forms of tissues and organs. Remarkably, the lungs of terrestrial vertebrates vary dramatically in form across species, despite providing the same function of transporting oxygen and carbon dioxide. These divergent forms arise from distinct physical processes through which the epithelium of the embryonic lung responds to the mechanical properties of its surrounding mesenchymal microenvironment. Here we compare the physical processes that guide folding of the lung epithelium in mammals, birds, and reptiles, and suggest a conceptual framework that reconciles how conserved molecular signaling generates divergent mechanical forces across these species.


Assuntos
Pulmão , Morfogênese , Vertebrados , Animais , Pulmão/embriologia , Pulmão/crescimento & desenvolvimento , Vertebrados/embriologia , Humanos
12.
Parasit Vectors ; 17(1): 265, 2024 Jun 20.
Artigo em Inglês | MEDLINE | ID: mdl-38902842

RESUMO

BACKGROUND: Severe fever with thrombocytopenia syndrome (SFTS) is an emerging tick-borne zoonosis caused by the SFTS virus (SFTSV). Understanding the prevalence of SFTSV RNA in humans, vertebrate hosts and ticks is crucial for SFTS control. METHODS: A systematic review and meta-analysis were conducted to determine the prevalence of SFTSV RNA in humans, vertebrate hosts and questing ticks. Nine electronic databases were searched for relevant publications, and data on SFTSV RNA prevalence were extracted. Pooled prevalence was estimated using a random effects model. Subgroup analysis and multivariable meta-regression were performed to investigate sources of heterogeneity. RESULTS: The pooled prevalence of SFTSV RNA in humans was 5.59% (95% confidence interval [CI] 2.78-9.15%) in those in close contact (close contacts) with infected individuals (infected cases) and 0.05% (95% CI 0.00-0.65%) in healthy individuals in endemic areas. The SFTSV infection rates in artiodactyls (5.60%; 95% CI 2.95-8.96%) and carnivores (6.34%; 95% CI 3.27-10.23%) were higher than those in rodents (0.45%; 95% CI 0.00-1.50%). Other animals, such as rabbits, hedgehogs and birds, also played significant roles in SFTSV transmission. The genus Haemaphysalis was the primary transmission vector, with members of Ixodes, Dermacentor, and Amblyomma also identified as potential vectors. The highest pooled prevalence was observed in adult ticks (1.03%; 95% CI 0.35-1.96%), followed by nymphs (0.66%; 95% CI 0.11-1.50%) and larvae (0.01%; 95% CI 0.00-0.46%). The pooled prevalence in ticks collected from endemic areas (1.86%; 95% CI 0.86-3.14%) was higher than that in ticks collected in other regions (0.41%; 95% CI 0.12-0.81%). CONCLUSIONS: Latent SFTSV infections are present in healthy individuals residing in endemic areas, and close contacts with SFTS cases are at a significantly higher risk of infection. The type of animal is linked to infection rates in vertebrate hosts, while infection rates in ticks are associated with the developmental stage. Further research is needed to investigate the impact of various environmental factors on SFTSV prevalence in vertebrate hosts and ticks.


Assuntos
Phlebovirus , Febre Grave com Síndrome de Trombocitopenia , Animais , Humanos , Phlebovirus/isolamento & purificação , Phlebovirus/genética , Febre Grave com Síndrome de Trombocitopenia/epidemiologia , Febre Grave com Síndrome de Trombocitopenia/virologia , Febre Grave com Síndrome de Trombocitopenia/transmissão , Carrapatos/virologia , Vertebrados/virologia , Vertebrados/parasitologia , Prevalência , RNA Viral/genética
13.
Proc Biol Sci ; 291(2024): 20232847, 2024 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-38864338

RESUMO

Gene loss is an important mechanism for evolution in low-light or cave environments where visual adaptations often involve a reduction or loss of eyesight. The plaat gene family encodes phospholipases essential for the degradation of organelles in the lens of the eye. These phospholipases translocate to damaged organelle membranes, inducing them to rupture. This rupture is required for lens transparency and is essential for developing a functioning eye. Plaat3 is thought to be responsible for this role in mammals, while plaat1 is thought to be responsible in other vertebrates. We used a macroevolutionary approach and comparative genomics to examine the origin, loss, synteny and selection of plaat1 across bony fishes and tetrapods. We showed that plaat1 (probably ancestral to all bony fish + tetrapods) has been lost in squamates and is significantly degraded in lineages of low-visual-acuity and blind mammals and fishes. Our findings suggest that plaat1 is important for visual acuity across bony vertebrates, and that its loss through relaxed selection and pseudogenization may have played a role in the repeated evolution of visual systems in low-light environments. Our study sheds light on the importance of gene-loss in trait evolution and provides insights into the mechanisms underlying visual acuity in low-light environments.


Assuntos
Vertebrados , Animais , Vertebrados/genética , Vertebrados/fisiologia , Seleção Genética , Deleção de Genes , Peixes/genética , Peixes/fisiologia , Filogenia , Evolução Biológica , Luz , Evolução Molecular
14.
Nat Commun ; 15(1): 5295, 2024 Jun 21.
Artigo em Inglês | MEDLINE | ID: mdl-38906876

RESUMO

The Living Planet Index (LPI) measures the average change in population size of vertebrate species over recent decades and has been repeatedly used to assess the changing state of nature. The LPI indicates that vertebrate populations have decreased by almost 70% over the last 50 years. This is in striking contrast with current studies based on the same population time series data that show that increasing and decreasing populations are balanced on average. Here, we examine the methodological pipeline of calculating the LPI to search for the source of this discrepancy. We find that the calculation of the LPI is biased by several mathematical issues which impose an imbalance between detected increasing and decreasing trends and overestimate population declines. Rather than indicating that vertebrate populations do not substantially change, our findings imply that we need better measures for providing a balanced picture of current biodiversity changes. We also show some modifications to improve the reliability of the LPI.


Assuntos
Biodiversidade , Dinâmica Populacional , Vertebrados , Animais , Densidade Demográfica , Viés , Planeta Terra , Ecossistema
15.
Nat Commun ; 15(1): 5273, 2024 Jun 20.
Artigo em Inglês | MEDLINE | ID: mdl-38902270

RESUMO

Vertebrates use the phosphate mineral apatite in their skeletons, which allowed them to develop tissues such as enamel, characterized by an outstanding combination of hardness and elasticity. It has been hypothesized that the evolution of the earliest vertebrate skeletal tissues, found in the teeth of the extinct group of conodonts, was driven by adaptation to dental function. We test this hypothesis quantitatively and demonstrate that the crystallographic order increased throughout the early evolution of conodont teeth in parallel with morphological adaptation to food processing. With the c-axes of apatite crystals oriented perpendicular to the functional feeding surfaces, the strongest resistance to uniaxial compressional stress is conferred along the long axes of denticles. Our results support increasing control over biomineralization in the first skeletonized vertebrates and allow us to test models of functional morphology and material properties across conodont dental diversity.


Assuntos
Evolução Biológica , Biomineralização , Fósseis , Dente , Biomineralização/fisiologia , Animais , Dente/metabolismo , Dente/química , Apatitas/metabolismo , Apatitas/química , Esmalte Dentário/química , Esmalte Dentário/metabolismo , Vertebrados
16.
Sci Rep ; 14(1): 14102, 2024 06 19.
Artigo em Inglês | MEDLINE | ID: mdl-38890338

RESUMO

Large predators have disproportionate effects on their underlying food webs. Thus, appropriately assigning trophic positions has important conservation implications both for the predators themselves and for their prey. Large-bodied predators are often referred to as apex predators, implying that they are many trophic levels above primary producers. However, theoretical considerations predict both higher and lower trophic position with increasing body size. Nitrogen stable isotope values (δ15N) are increasingly replacing stomach contents or behavioral observations to assess trophic position and it is often assumed that ontogenetic dietary shifts result in higher trophic positions. Intraspecific studies based on δ15N values found a positive relationship between size and inferred trophic position. Here, we use datasets of predatory vertebrate ectotherms (crocodilians, turtles, lizards and fishes) to show that, although there are positive intraspecific relationships between size and δ15N values, relationships between stomach-content-based trophic level (TPdiet) and size are undetectable or negative. As there is usually no single value for 15N trophic discrimination factor (TDF) applicable to a predator species or its prey, estimates of trophic position based on δ15N in ectotherm vertebrates with large size ranges, may be inaccurate and biased. We urge a reconsideration of the sole use of δ15N values to assess trophic position and encourage the combined use of isotopes and stomach contents to assess diet and trophic level.


Assuntos
Tamanho Corporal , Cadeia Alimentar , Isótopos de Nitrogênio , Comportamento Predatório , Vertebrados , Animais , Isótopos de Nitrogênio/análise , Isótopos de Nitrogênio/metabolismo , Comportamento Predatório/fisiologia , Lagartos/fisiologia , Lagartos/metabolismo , Peixes/fisiologia , Conteúdo Gastrointestinal/química , Tartarugas/fisiologia , Tartarugas/metabolismo
17.
Front Endocrinol (Lausanne) ; 15: 1422711, 2024.
Artigo em Inglês | MEDLINE | ID: mdl-38915898

RESUMO

Spexin (SPX, NPQ) is a 14-amino acid neuroactive peptide identified using bioinformatics. This amino acid sequence of the mature spexin peptide has been highly conserved during species evolution and is widely distributed in the central nervous system and peripheral tissues and organs. Therefore, spexin may play a role in various biological functions. Spexin, the cognate ligand for GALR2/3, acting as a neuromodulator or endocrine signaling factor, can inhibit reproductive performance. However, controversies and gaps in knowledge persist regarding spexin-mediated regulation of animal reproductive functions. This review focuses on the hypothalamic-pituitary-gonadal axis and provides a comprehensive overview of the impact of spexin on reproduction. Through this review, we aim to enhance understanding and obtain in-depth insights into the regulation of reproduction by spexin peptides, thereby providing a scientific basis for future investigations into the molecular mechanisms underlying the influence of spexin on reproductive function. Such investigations hold potential benefits for optimizing farming practices in livestock, poultry, and fish industries.


Assuntos
Hormônios Peptídicos , Reprodução , Vertebrados , Animais , Reprodução/fisiologia , Hormônios Peptídicos/metabolismo , Hormônios Peptídicos/fisiologia , Vertebrados/fisiologia , Humanos , Sistema Hipotálamo-Hipofisário/metabolismo , Sistema Hipotálamo-Hipofisário/fisiologia
18.
ISME J ; 18(1)2024 Jan 08.
Artigo em Inglês | MEDLINE | ID: mdl-38904949

RESUMO

Prior work has shown a positive scaling relationship between vertebrate body size, human height, and gut microbiome alpha diversity. This observation mirrors commonly observed species area relationships (SARs) in many other ecosystems. Here, we expand these observations to several large datasets, showing that this size-diversity scaling relationship is independent of relevant covariates, like diet, body mass index, age, sex, bowel movement frequency, antibiotic usage, and cardiometabolic health markers. Island biogeography theory (IBT), which predicts that larger islands tend to harbor greater species diversity through neutral demographic processes, provides a simple mechanism for positive SARs. Using a gut-adapted IBT model, we demonstrated that increasing the length of a flow-through ecosystem led to increased species diversity, closely matching our empirical observations. We delve into the possible clinical implications of these SARs in the American Gut cohort. Consistent with prior observations that lower alpha diversity is a risk factor for Clostridioides difficile infection (CDI), we found that individuals who reported a history of CDI were shorter than those who did not and that this relationship was mediated by alpha diversity. We observed that vegetable consumption had a much stronger association with CDI history, which was also partially mediated by alpha diversity. In summary, we find that the positive scaling observed between body size and gut alpha diversity can be plausibly explained by a gut-adapted IBT model, may be related to CDI risk, and vegetable intake appears to independently mitigate this risk, although additional work is needed to validate the potential disease risk implications.


Assuntos
Microbioma Gastrointestinal , Humanos , Animais , Feminino , Masculino , Vertebrados/microbiologia , Ilhas , Estatura , Infecções por Clostridium/microbiologia , Adulto , Pessoa de Meia-Idade , Biodiversidade , Tamanho Corporal , Dieta
19.
Rev Bras Parasitol Vet ; 33(2): e015823, 2024.
Artigo em Inglês | MEDLINE | ID: mdl-38836808

RESUMO

The aim of this study was to record Centrorhynchus sp. associated with the exotic species Aquarana catesbeiana (bullfrog) in southern Brazil and to present a checklist of vertebrate hosts in South America. Twenty-nine adults and juveniles of A. catesbeiana were collected in Capão do Leão, state of Rio Grande do Sul, Brazil, between October 2019 and December 2020. We found 275 specimens of Centrorhynchus sp. cystacanths in the stomach musculature and coelomic cavity of 55.1% of hosts (16). There was no significant differences in the prevalence and mean intensity of infection with cystacanths when compared males and females of A. catesbeiana. The prevalence was significantly higher in adults than in juveniles. The checklist presents 106 species of vertebrate hosts and 14 taxa of Centrorhynchus recorded in nine South American countries. Avian were the main definitive hosts of Centrorhynchus spp. and snakes Dipsadidae, anurans Hylidae and Leptodactylidae the main paratenic hosts in South America. This is the first record of Centrorhynchus cystacanths in A. catesbeiana in the South America. The study provides tools to help understand the parasitic relationships between species of Centrorhynchus and A. catesbeiana and other hosts in areas where bullfrog have been introduced.


Assuntos
Acantocéfalos , Anuros , Lista de Checagem , Animais , Anuros/parasitologia , Feminino , Masculino , Brasil , Acantocéfalos/classificação , Acantocéfalos/isolamento & purificação , América do Sul , Prevalência , Helmintíase Animal/parasitologia , Helmintíase Animal/epidemiologia , Vertebrados/parasitologia , Aves/parasitologia , Serpentes/parasitologia
20.
Chromosoma ; 133(3): 169-181, 2024 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-38856923

RESUMO

Centromeres are chromatin structures specialized in sister chromatid cohesion, kinetochore assembly, and microtubule attachment during chromosome segregation. The regional centromere of vertebrates consists of long regions of highly repetitive sequences occupied by the Histone H3 variant CENP-A, and which are flanked by pericentromeres. The three-dimensional organization of centromeric chromatin is paramount for its functionality and its ability to withstand spindle forces. Alongside CENP-A, key contributors to the folding of this structure include components of the Constitutive Centromere-Associated Network (CCAN), the protein CENP-B, and condensin and cohesin complexes. Despite its importance, the intricate architecture of the regional centromere of vertebrates remains largely unknown. Recent advancements in long-read sequencing, super-resolution and cryo-electron microscopy, and chromosome conformation capture techniques have significantly improved our understanding of this structure at various levels, from the linear arrangement of centromeric sequences and their epigenetic landscape to their higher-order compaction. In this review, we discuss the latest insights on centromere organization and place them in the context of recent findings describing a bipartite higher-order organization of the centromere.


Assuntos
Centrômero , Cromatina , Proteínas Cromossômicas não Histona , Vertebrados , Centrômero/metabolismo , Centrômero/ultraestrutura , Animais , Cromatina/metabolismo , Cromatina/genética , Cromatina/ultraestrutura , Cromatina/química , Humanos , Proteínas Cromossômicas não Histona/metabolismo , Proteínas Cromossômicas não Histona/química , Proteínas Cromossômicas não Histona/genética , Vertebrados/genética , Proteína Centromérica A/metabolismo , Proteína Centromérica A/genética , Coesinas , Complexos Multiproteicos/metabolismo , Complexos Multiproteicos/ultraestrutura , Proteína B de Centrômero/metabolismo , Proteína B de Centrômero/genética , Proteínas de Ligação a DNA/metabolismo , Proteínas de Ligação a DNA/química , Proteínas de Ligação a DNA/genética , Proteínas de Ciclo Celular/metabolismo , Proteínas de Ciclo Celular/genética , Proteínas de Ciclo Celular/ultraestrutura , Adenosina Trifosfatases
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