De novo assembly and analysis of changes in the protein-coding transcriptome of the freshwater shrimp Paratya australiensis (Decapoda: Atyidae) in response to acid sulfate drainage water.

Bain, Peter A; Gregg, Adrienne L; Kumar, Anupama

Bain, Peter A; Gregg, Adrienne L; Kumar, Anupama.

Affiliation

Bain PA; Commonwealth Scientific and Industrial Research Organisation, Waite Road, Urrbrae, 5064, Australia. peter.bain@csiro.au.
Gregg AL; Commonwealth Scientific and Industrial Research Organisation, Private Mail Bag 2, Glen Osmond, 5064, Australia. peter.bain@csiro.au.
Kumar A; Commonwealth Scientific and Industrial Research Organisation, Waite Road, Urrbrae, 5064, Australia.

BMC Genomics ; 17(1): 890, 2016 11 07.

Article in En | MEDLINE | ID: mdl-27821072

Subject(s)

Adaptation, Biological/genetics; Computational Biology; Decapoda/genetics; Fresh Water; Open Reading Frames; Sulfates; Transcriptome; Water Pollutants, Chemical; Amino Acid Sequence; Animals; Computational Biology/methods; Decapoda/classification; Decapoda/drug effects; Gene Expression Profiling; High-Throughput Nucleotide Sequencing; Molecular Sequence Annotation; Osmoregulation/genetics; Oxidative Stress/genetics; Phylogeny; Reproducibility of Results; Sulfates/toxicity; Water Pollutants, Chemical/toxicity

Key words

Acid sulfate soils; Aquatic toxicology; Decapod crustaceans; Toxicogenomics; Transcriptomics

Fulltext

XML

PubMed Links

Search on Google

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Decapoda / Sulfates / Water Pollutants, Chemical / Adaptation, Biological / Open Reading Frames / Computational Biology / Transcriptome / Fresh Water Type of study: Prognostic_studies Limits: Animals Language: En Journal: BMC Genomics Year: 2016 Document type: Article

Fulltext

XML

PubMed Links

Search on Google