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Computation of protein-ligand binding free energies using quantum mechanical bespoke force fields.
Cole, Daniel J; Cabeza de Vaca, Israel; Jorgensen, William L.
Affiliation
  • Cole DJ; School of Natural and Environmental Sciences , Newcastle University , Newcastle upon Tyne NE1 7RU , UK . Email: daniel.cole@ncl.ac.uk.
  • Cabeza de Vaca I; Department of Chemistry , Yale University , New Haven , Connecticut 06520-8107 , USA.
  • Jorgensen WL; Department of Chemistry , Yale University , New Haven , Connecticut 06520-8107 , USA.
Medchemcomm ; 10(7): 1116-1120, 2019 Jul 01.
Article in En | MEDLINE | ID: mdl-31391883
A quantum mechanical bespoke molecular mechanics force field is derived for the L99A mutant of T4 lysozyme and used to compute absolute binding free energies of six benzene analogs to the protein. Promising agreement between theory and experiment highlights the potential for future use of system-specific force fields in computer-aided drug design.

Full text: 1 Collection: 01-internacional Database: MEDLINE Language: En Journal: Medchemcomm Year: 2019 Document type: Article

Full text: 1 Collection: 01-internacional Database: MEDLINE Language: En Journal: Medchemcomm Year: 2019 Document type: Article