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Imaging neuromodulators with high spatiotemporal resolution using genetically encoded indicators.
Patriarchi, Tommaso; Cho, Jounhong Ryan; Merten, Katharina; Marley, Aaron; Broussard, Gerard Joey; Liang, Ruqiang; Williams, John; Nimmerjahn, Axel; von Zastrow, Mark; Gradinaru, Viviana; Tian, Lin.
Affiliation
  • Patriarchi T; Department of Biochemistry and Molecular Medicine, University of California, Davis, Davis, CA, USA.
  • Cho JR; Institute of Pharmacology and Toxicology, University of Zurich, Zurich, Switzerland.
  • Merten K; Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, USA.
  • Marley A; Waitt Advanced Biophotonics Center, Salk Institute for Biological Studies, La Jolla, CA, USA.
  • Broussard GJ; Department of Cellular and Molecular Pharmacology, University of California, San Francisco, San Francisco, CA, USA.
  • Liang R; Department of Biochemistry and Molecular Medicine, University of California, Davis, Davis, CA, USA.
  • Williams J; Princeton Neuroscience Institute and Department of Molecular Biology, Princeton University, Princeton, NJ, USA.
  • Nimmerjahn A; Department of Biochemistry and Molecular Medicine, University of California, Davis, Davis, CA, USA.
  • von Zastrow M; Vollum Institute, Oregon Health & Science University, Portland, OR, USA. williamj@ohsu.edu.
  • Gradinaru V; Waitt Advanced Biophotonics Center, Salk Institute for Biological Studies, La Jolla, CA, USA. animmerj@salk.edu.
  • Tian L; Department of Cellular and Molecular Pharmacology, University of California, San Francisco, San Francisco, CA, USA. mark@vzlab.org.
Nat Protoc ; 14(12): 3471-3505, 2019 12.
Article in En | MEDLINE | ID: mdl-31732722
ABSTRACT
Multiple aspects of neural activity, from neuronal firing to neuromodulator release and signaling, underlie brain function and ultimately shape animal behavior. The recently developed and constantly growing toolbox of genetically encoded sensors for neural activity, including calcium, voltage, neurotransmitter and neuromodulator sensors, allows precise measurement of these signaling events with high spatial and temporal resolution. Here, we describe the engineering, characterization and application of our recently developed dLight1, a suite of genetically encoded dopamine (DA) sensors based on human inert DA receptors. dLight1 offers high molecular specificity, requisite affinity and kinetics and great sensitivity for measuring DA release in vivo. The detailed workflow described in this protocol can be used to systematically characterize and validate dLight1 in increasingly intact biological systems, from cultured cells to acute brain slices to behaving mice. For tool developers, we focus on characterizing five distinct properties of dLight1 dynamic range, affinity, molecular specificity, kinetics and interaction with endogenous signaling; for end users, we provide comprehensive step-by-step instructions for how to leverage fiber photometry and two-photon imaging to measure dLight1 transients in vivo. The instructions provided in this protocol are designed to help laboratory personnel with a broad range of experience (at the graduate or post-graduate level) to develop and utilize novel neuromodulator sensors in vivo, by using dLight1 as a benchmark.
Subject(s)

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Receptors, Dopamine / Neurotransmitter Agents / Optogenetics Limits: Animals / Humans Language: En Journal: Nat Protoc Year: 2019 Document type: Article

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Receptors, Dopamine / Neurotransmitter Agents / Optogenetics Limits: Animals / Humans Language: En Journal: Nat Protoc Year: 2019 Document type: Article